Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Quercus_20lobata_20[genbank_20GCA_5F001633185.1_202016-04-28] 40,156 sequences; 759,241,194 total letters Query= NC_011273.1 Length=164602 Score E Sequences producing significant alignments: (Bits) Value seq40156 89.7 5e-13 seq40154 89.7 5e-13 >seq40156 Length=57058 Score = 89.7 bits (98), Expect = 5e-13 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 92611 CGTAGCGGGGTAGAGCAGCTCGGTAGCTCGCCAGGCTCATAACCTGGAGGCCGTGGGTTC 92670 ||| |||||||||||||||| |||||||||| ||||||||||||| |||| | |||||| Sbjct 9655 CGTCGCGGGGTAGAGCAGCTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACGGGTTC 9596 Query 92671 AAATCCC 92677 ||||||| Sbjct 9595 AAATCCC 9589 >seq40154 Length=1768 Score = 89.7 bits (98), Expect = 5e-13 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 92611 CGTAGCGGGGTAGAGCAGCTCGGTAGCTCGCCAGGCTCATAACCTGGAGGCCGTGGGTTC 92670 ||| |||||||||||||||| |||||||||| ||||||||||||| |||| | |||||| Sbjct 207 CGTCGCGGGGTAGAGCAGCTTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCACGGGTTC 148 Query 92671 AAATCCC 92677 ||||||| Sbjct 147 AAATCCC 141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 526334073933120