Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Quercus_20lobata_20[genbank_20GCA_5F001633185.1_202016-04-28] 40,156 sequences; 759,241,194 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq12080 125 7e-24 seq3733 109 5e-19 seq2332 105 7e-18 seq3180 100 3e-16 seq2326 100 3e-16 seq5335 96.9 3e-15 seq762 95.1 1e-14 seq5462 93.3 4e-14 seq6693 87.8 2e-12 >seq12080 Length=19512 Score = 125 bits (138), Expect = 7e-24 Identities = 351/529 (66%), Gaps = 16/529 (3%) Strand=Plus/Plus Query 52314 GCGTTCGAGCACGTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAG 52373 ||| | ||| ||| || ||||| || ||||| ||||||| || ||||||||| Sbjct 8312 GCGATGGAGACCGTTCCTTGCGTGGCGAAGAAGGCCGAGTGGGCCCTGCGGTGGATCGAC 8371 Query 52374 AGCGACACCGCCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGttt 52433 ||| | || | || ||| | | | |||||||| ||||| ||| | || Sbjct 8372 GGCGGA---GAATCGTTCGCGGAGAGGCTCATCGCCTTCGCTTGCGTCGAAGGCATTTTC 8428 Query 52434 ttttCCGGCAGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTG 52493 || ||||| ||||| ||| || |||| | |||| | || |||||||||| | Sbjct 8429 TTCTCCGGAAGCTTCTGCGCGATATTTTGGCTAAAAAAGCGCGGGTTAATGCCCGGGTTA 8488 Query 52494 ACGTTCAGCAACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTC 52553 || ||| |||||||||||| ||||| |||||||| || ||| || || |||||||| Sbjct 8489 ACCTTCTCCAACGAGTTGATCTCGCGAGACGAAGGTCTCCACTGCGATTTCGCGTGCCTG 8548 Query 52554 TACTACAAGACGCGCGTGACCGAAAAATTGGATTCGGACACGATCCTGA--GC-ATGTTC 52610 |||| || | | || | | || || ||| | | ||| || || || Sbjct 8549 CTCTAC---ACTCTCTTGCGCAAGAAGCTGAGCGAGGA---GCGCGTGAAGGCTATCGTC 8602 Query 52611 AAGGAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTG 52670 || ||||||| ||| || | ||||||| | | ||||||||| || | || | Sbjct 8603 CGCGACGCGGTGGATATAGAGAGGGAGTTTGTGTGCGACGCGCTGCCCTGCGCGTTGGTT 8662 Query 52671 GGCATGAACGCGCAGTC-CATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGT 52729 || ||||||| || || ||| || ||||||||||||||||||||||| | || |||| Sbjct 8663 GGGATGAACG-GCGATCTGATGAGCCAGTACATCGAGTTTGTGGCGGATAGGCTTTTGGG 8721 Query 52730 GCAGCTCGGG-CAGCCAAAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACA 52788 | | ||| | |||| | || | | | || || || ||||| | ||| | | Sbjct 8722 CGCGTTGGGGTGTGGCAAAAT-CTACGATGTTCAGAACCCATTTGATTGGATGGAACTGA 8780 Query 52789 TTTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 ||||| | | || |||||||| || || |||||| |||| || ||||| Sbjct 8781 TTTCGTTGCAAGGAAAGACCAATTTCTTTGAGAAGAGAGTTGGGGAGTA 8829 >seq3733 Length=159728 Score = 109 bits (120), Expect = 5e-19 Identities = 145/198 (73%), Gaps = 4/198 (2%) Strand=Plus/Plus Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478 ||||||| || || |||||||| ||| | ||||| |||||| | ||||||||||| Sbjct 111882 TTGACTCTTTCTGGATGTTGTAATCGGCGAGGGTACGACCGTCCTCCAATTGTTTACCGG 111941 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538 |||| || ||||| |||||||| || || ||||| ||||| || | || | ||| Sbjct 111942 CGAAGATGAGCCGCTGCTGGTCCGGGGGAATGCCTTCCTTGTC-CTGGATCTTGGCCTTA 112000 Query 138539 A--TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGT 138596 | ||| || | |||||||| ||||||||| | || | ||||| ||||| || || Sbjct 112001 ACGTTG-TCTATGGTGTCGGAGCTCTCCACCTCCAGGGTGATGGTTTTTCCAGTTAGGGT 112059 Query 138597 TTTTACAAAAATCTGCAT 138614 ||| || || |||||||| Sbjct 112060 TTTCACGAAGATCTGCAT 112077 Score = 102 bits (112), Expect = 8e-17 Identities = 140/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478 ||||||| || || |||||||||||| | ||||| |||||| | ||||||||||| Sbjct 63010 TTGACTCTTTCTGGATGTTGTAGTCGGCGAGGGTACGACCGTCCTCCAATTGTTTACCGG 63069 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538 |||| || | ||| |||||||| || || ||||| ||||| ||| || || | Sbjct 63070 CGAAGATGAGCCTCTGCTGGTCCGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGA 63129 Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 | || | |||||||| ||||||||| | || | ||||| || || || |||| Sbjct 63130 CGTTGTCTATGGTGTCGGAGCTCTCCACCTCCAGGGTGATGGTTTTTCCGGTTAGGGTTT 63189 Query 138599 TTACAAAAATCTGCAT 138614 | || || |||||||| Sbjct 63190 TCACGAAGATCTGCAT 63205 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/199 (72%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478 |||||||||| ||||||||||| ||| | ||||| |||||| | |||||| || | Sbjct 153150 TTGACTCCTTCTGAATGTTGTAATCGGCAAGGGTACGACCGTCCTCCAATTGTTTCCCAG 153209 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538 |||| || | ||| |||||||| || || ||||| || || ||| | || | || Sbjct 153210 CGAAGATGAGCCTCTGCTGGTCCGGTGGAATGCCTTCCTTATC-CTGAATCTTGGCCTTC 153268 Query 138539 A--TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGT 138596 | ||| || | ||||||| ||||||||| | || | ||| || || || || || Sbjct 153269 ACGTTG-TCAATCGTGTCGGAGCTCTCCACCTCCAAGGTGATCGTCTTCCCGGTTAGGGT 153327 Query 138597 TTTTACAAAAATCTGCATG 138615 ||| ||||| ||||||||| Sbjct 153328 TTTCACAAAGATCTGCATG 153346 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||||||||||||||| || | ||||||| ||||| | ||| || || | | Sbjct 152924 GACTCCTTTTGAATGTTGTAATCAGCGAGAGTACGCCCTTCCTCCAATTGCTTCCCAGCA 152983 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG-TTTTAA 138539 |||| || | ||| || |||||||| || || || || || ||| | |||| || | Sbjct 152984 AAGATGAGCCTCTGCTGATCCGGAGGAATTCCCTCCTTATC-TTGAATCTTTGCCTTCAC 153042 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | || | || |||| ||||||||| | || | ||| || || |||||||| || Sbjct 153043 ATTATCGATCGTATCGGAGCTCTCCACCTCCAAAGTAATCGTCTTCCCCGTCAGAGTCTT 153102 Query 138600 TACAAAAATCTGCAT 138614 || || |||||||| Sbjct 153103 CACGAATATCTGCAT 153117 Score = 82.4 bits (90), Expect = 8e-11 Identities = 138/196 (70%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||||||||||||||| || || | ||| | | ||||| | ||| ||||| | | Sbjct 62556 GACTCCTTTTGAATGTTATAATCAGCAAGAGTCCTCCCATCCTCCAATTGCTTACCAGCA 62615 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG--TTTTA 138538 |||| || | ||| || |||||||| || || || || || ||| | || | || Sbjct 62616 AAGATCAGCCTCTGCTGATCCGGAGGGATTCCCTCCTTATC-TTGAATCTTCGCCTTCAC 62674 Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 |||| || | || |||| ||||||||| | || | ||| || ||||||||||| | Sbjct 62675 ATTG-TCAATCGTATCGGAGCTCTCCACCTCTAGAGTAATCGTCTTCCCAGTCAGAGTCT 62733 Query 138599 TTACAAAAATCTGCAT 138614 | || || |||||||| Sbjct 62734 TGACGAATATCTGCAT 62749 >seq2332 Length=86198 Score = 105 bits (116), Expect = 7e-18 Identities = 143/197 (73%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478 |||| ||||| ||||| ||||| || || ||| || ||||| |||||||| || | Sbjct 74882 TTGATTCCTTCTGAATATTGTAATCAGCCAGAGTGCGACCATCCTCAAGTTGTTTTCCAG 74823 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538 | |||| || | ||| || |||||||| || ||||| || || ||| | |||| |||| Sbjct 74822 CAAAGATGAGCCTCTGCTGATCCGGAGGAATCCCTTCCTTATCT-TGAATCTTTGCTTTA 74764 Query 138539 ATTGT-TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTT 138597 | | || | ||| || | ||||||||| | || | || || ||||||||||| Sbjct 74763 ACATTATCTATGGTATCAGAGCTCTCCACCTCAAGGGTGATGGTCTTCCCAGTCAGAGTC 74704 Query 138598 TTTACAAAAATCTGCAT 138614 || |||||||||||||| Sbjct 74703 TTAACAAAAATCTGCAT 74687 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/213 (70%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 138405 AACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTAC-GCGAGTCCT 138463 ||| ||||| | | ||||| || |||||||| ||||| || ||| | || | || | Sbjct 74668 AACCAAATGAAGAGTAGACTCTTTCTGAATGTTATAGTCAGCCAAAGTCCTGCCA-TCTT 74610 Query 138464 CGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGG 138523 | || ||||| || | | || || | ||||||||| || || ||||||||||| || Sbjct 74609 CAAGCTGTTTTCCAGCGAATATCAGCCTCTGTTGGTCTGGTGGAATACCTTCTTTATC-C 74551 Query 138524 TGATTTTTTGTTTTA--ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGT 138581 ||| |||||| ||| |||| || | || || | ||| ||||| | || | || Sbjct 74550 TGAATTTTTGCCTTAACATTG-TCAATAGTATCAGAGCTCTCGACCTCAAGAGTAATAGT 74492 Query 138582 TTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || ||||| ||||| |||||||| || ||||| Sbjct 74491 CTTGCCAGTAAGAGTCTTTACAAAGATTTGCAT 74459 >seq3180 Length=26617 Score = 100 bits (110), Expect = 3e-16 Identities = 144/198 (73%), Gaps = 4/198 (2%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGT-CGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGA 138479 |||||||| || |||||||||| |||| | || || ||||||||| || || |||| Sbjct 25151 GACTCCTTCTGGATGTTGTAGTCCGCT-AGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGC 25093 Query 138480 ATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA- 138538 |||| || ||||| |||||||| || || ||||| ||||| ||| || || | Sbjct 25092 GAAGATGAGGCGCTGCTGGTCCGGCGGGATTCCTTCCTTGTCTTGGATCTTGGCCTTCAC 25033 Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 |||| || | |||||| | ||||| ||||||| || | || || || || || || | Sbjct 25032 ATTG-TCGATGGTGTCTGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTTAGGGTCT 24974 Query 138599 TTACAAAAATCTGCATGG 138616 | || || |||||||||| Sbjct 24973 TCACGAAGATCTGCATGG 24956 >seq2326 Length=95029 Score = 100 bits (110), Expect = 3e-16 Identities = 142/197 (72%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478 |||| ||||| ||||| ||||| || || ||| || ||||| |||||||| || | Sbjct 85437 TTGATTCCTTCTGAATATTGTAATCAGCCAGAGTGCGACCATCCTCAAGTTGTTTTCCAG 85378 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538 | |||| || | ||| || || ||||| || ||||| || || ||| | |||| |||| Sbjct 85377 CAAAGATGAGCCTCTGCTGATCTGGAGGAATCCCTTCCTTATCT-TGAATCTTTGCTTTA 85319 Query 138539 ATTGT-TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTT 138597 | | || | ||| || | ||||||||| | || | || || ||||||||||| Sbjct 85318 ACATTATCTATGGTATCAGAGCTCTCCACCTCAAGGGTGATGGTCTTCCCAGTCAGAGTC 85259 Query 138598 TTTACAAAAATCTGCAT 138614 || |||||||||||||| Sbjct 85258 TTAACAAAAATCTGCAT 85242 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/213 (70%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 138405 AACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTAC-GCGAGTCCT 138463 ||| ||||| | | ||||| || |||||||| ||||| || ||| | || | || | Sbjct 85223 AACCAAATGAAGAGTAGACTCTTTCTGAATGTTATAGTCAGCCAAAGTCCTGCCA-TCTT 85165 Query 138464 CGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGG 138523 | || ||||| || | | || || | ||||||||| || || ||||||||||| || Sbjct 85164 CAAGCTGTTTTCCAGCGAATATCAGCCTCTGTTGGTCTGGTGGAATACCTTCTTTATC-C 85106 Query 138524 TGATTTTTTGTTTTA--ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGT 138581 ||| |||||| ||| |||| || | || || | ||| ||||| | || | || Sbjct 85105 TGAATTTTTGCCTTAACATTG-TCAATAGTATCAGAGCTCTCAACCTCAAGAGTAATAGT 85047 Query 138582 TTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || ||||| ||||| |||||||| || ||||| Sbjct 85046 CTTGCCAGTAAGAGTCTTTACAAAGATTTGCAT 85014 >seq5335 Length=19063 Score = 96.9 bits (106), Expect = 3e-15 Identities = 141/197 (72%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478 |||| ||||| ||||| ||||| || | ||| || ||||||||||| || || | Sbjct 7547 TTGATTCCTTCTGAATATTGTAATCAGCAAGAGTGCGGCCATCCTCGAGTTGCTTCCCTG 7606 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538 | |||| || | ||| || || ||||| || ||||| ||||| ||| | |||| |||| Sbjct 7607 CAAAGATAAGCCTCTGCTGATCTGGAGGAATCCCTTCCTTGTC-TTGAATCTTTGCTTTA 7665 Query 138539 A-TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTT 138597 | | || | ||| || | ||||||||| | || | || || || |||||||| Sbjct 7666 ACATTATCAATGGTATCAGAACTCTCCACCTCAAGGGTGATGGTCTTTCCTGTCAGAGTC 7725 Query 138598 TTTACAAAAATCTGCAT 138614 || |||||||||||||| Sbjct 7726 TTCACAAAAATCTGCAT 7742 Score = 89.7 bits (98), Expect = 5e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||||||||||||||| || || || || || || || || || || | | | Sbjct 7323 CTCCTTTTGAATGTTGTAATCAGCCAGGGTGCGGCCATCTTCAAGCTGCTTTCCAGCAAA 7382 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATT 138541 ||| || | ||| || || || || ||||| || ||||| ||| | || | ||| | | Sbjct 7383 GATGAGCCTCTGCTGATCTGGTGGGATACCCTCCTTGTC-CTGAATCTTAGCTTTCACGT 7441 Query 138542 GTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTA 138601 || | ||| |||| ||||||||| | || | || || |||||||||||||| | Sbjct 7442 TATCGATGGTATCGGAGCTCTCCACCTCAAGAGTGATTGTCTTCCCAGTCAGAGTTTTCA 7501 Query 138602 CAAAAATCTGCAT 138614 ||||||||||||| Sbjct 7502 CAAAAATCTGCAT 7514 >seq762 Length=331234 Score = 95.1 bits (104), Expect = 1e-14 Identities = 143/197 (73%), Gaps = 6/197 (3%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAG--TCCTCGAGTTGTTTACCGG 138478 || |||||||| |||||||||||| || ||| |||| || |||||||||||||||| Sbjct 316874 GATTCCTTTTGTATGTTGTAGTCGG-CA-AGTGTGCGACCATCTTCGAGTTGTTTACCGG 316817 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG-TTTT 138537 | |||| | | ||| ||||| || || ||||| || ||||| ||| |||| | ||| Sbjct 316816 CAAAGATCAACCTCTGCTGGTCTGGTGGGATACCCTCCTTGTC-TTGAATTTTGGCTTTG 316758 Query 138538 AATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTT 138597 | | || | |||||| | ||| || || | || | ||||| ||||||| || Sbjct 316757 ACGTTATCAATGGTGTCAGAGCTCTCAACTTCCAAAGTAATTGTTTTGCCAGTCAAGGTC 316698 Query 138598 TTTACAAAAATCTGCAT 138614 || |||||||| ||||| Sbjct 316697 TTCACAAAAATTTGCAT 316681 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||||||||| ||||| |||||| || ||| || || |||||||| ||||||| | Sbjct 300432 GACTCCTTTTGGATGTTATAGTCGGCCAAAGTGCGACCATCTTCGAGTTGCTTACCGGCA 300373 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| | | ||| || || || || ||||| || ||||| ||| || ||| | Sbjct 300372 AAGATCAACCTCTGCTGATCTGGTGGGATACCCTCCTTGTCTTGGATCTTAGCTTTGACA 300313 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||| | || ||||||| || | || || || |||||||| || Sbjct 300312 TTATCAATAGTGTCTGAGCTTTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGAGTCTTA 300253 Query 138601 ACAAAAATCTGCAT 138614 ||||| |||||||| Sbjct 300252 ACAAAGATCTGCAT 300239 >seq5462 Length=105758 Score = 93.3 bits (102), Expect = 4e-14 Identities = 142/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478 ||||||| || ||||||||||| ||| | ||||| |||||| | |||||| |||| Sbjct 6973 TTGACTCTTTCTGAATGTTGTAATCGGCGAGGGTACGACCGTCCTCCAATTGTTTCCCGG 6914 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538 |||| || | ||| |||||||| || || ||||| || || ||| | || | || Sbjct 6913 CGAAGATGAGCCTCTGCTGGTCCGGTGGAATGCCTTCCTTATC-CTGAATCTTGGCCTTC 6855 Query 138539 A--TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGT 138596 | ||| || | ||||||| ||| ||||| | || | ||| || || || || || Sbjct 6854 ACGTTG-TCAATCGTGTCGGAGCTCTCTACCTCCAAGGTGATCGTCTTCCCGGTTAGGGT 6796 Query 138597 TTTTACAAAAATCTGCATG 138615 ||| ||||| ||||||||| Sbjct 6795 TTTCACAAAGATCTGCATG 6777 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||| || ||||| ||||||||| | |||||| ||| || | || || |||| Sbjct 6515 GACTCTTTCTGAATATTGTAGTCGGCGAGAGTACGGCCGTCTTCCAACTGCTTTCCGGCG 6456 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| | ||||| || || ||||| || ||||| ||||| ||| || || | Sbjct 6455 AAGATCAATCGCTGCTGATCGGGAGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTCACG 6396 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||||| ||||||||| | || | || || || ||||||||||| Sbjct 6395 TTGTCGATGGTGTCGGAGCTCTCCACCTCCAAGGTGATGGTCTTGCCGGTCAGAGTTTTC 6336 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 6335 ACGAAGATCTGCAT 6322 Score = 82.4 bits (90), Expect = 8e-11 Identities = 139/196 (71%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTC-GCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGA 138479 ||||||||||||||||| || || ||| | ||||||| ||||| | ||| || || | Sbjct 7199 GACTCCTTTTGAATGTTATAATCAGCT-AGAGTACGCCCATCCTCCAATTGCTTCCCAGC 7141 Query 138480 ATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG-TTTTA 138538 | |||| || | ||| || |||||||| || || || || || ||| | || | || | Sbjct 7140 AAAGATCAGCCTCTGCTGATCCGGAGGGATTCCCTCCTTATC-TTGAATCTTGGCCTTCA 7082 Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 | || | || |||| ||||||||| | || | ||| || || |||||||| | Sbjct 7081 CATTATCGATCGTATCGGAGCTCTCCACCTCCAGAGTAATCGTCTTCCCCGTCAGAGTCT 7022 Query 138599 TTACAAAAATCTGCAT 138614 | || || |||||||| Sbjct 7021 TCACGAATATCTGCAT 7006 >seq6693 Length=64523 Score = 87.8 bits (96), Expect = 2e-12 Identities = 139/197 (71%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | || || || ||||| ||||| || | Sbjct 41946 GACTCCTTCTGGATGTTGTAGTCGGCTAAGGTTCGGCCATCTTCGAGCTGTTTCCCTGCG 42005 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 | || | ||||||||||||||| || || || || ||||| ||| || || | | Sbjct 42006 AAAATCAAACGCTGTTGGTCCGGTGGGATCCCCTCCTTGTCTTGGATCTTGGCCTTGACA 42065 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | |||||| | ||||| ||||| | || | || || || || || ||||| Sbjct 42066 TTG-TCGATGGTGTCTGAGGACTCAACCTCTAGGGTTATGGTCTTCCCCGTTAGGGTTTT 42124 Query 138600 TACAAAAATCTGCATGG 138616 || || |||||||||| Sbjct 42125 CACGAAGATCTGCATGG 42141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496013301088320