Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Quercus_20lobata_20[genbank_20GCA_5F001633185.1_202016-04-28] 40,156 sequences; 759,241,194 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq5990 493 1e-134 seq40156 390 1e-103 seq6232 129 7e-25 seq5685 118 1e-21 seq9596 113 5e-20 seq3460 111 2e-19 seq1867 104 3e-17 seq1820 104 3e-17 seq4339 93.3 5e-14 seq4685 84.2 3e-11 >seq5990 Length=34798 Score = 493 bits (546), Expect = 1e-134 Identities = 684/955 (72%), Gaps = 2/955 (0%) Strand=Plus/Minus Query 124044 CAGATGCTAGGTCTAGTGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCCA 124103 |||| |||| |||||| ||||| || || ||||| | ||||||||||||||||||||| | Sbjct 11000 CAGAAGCTAAGTCTAGAGGGAAATTATGAGCATTACGTTCATGCATAACTTCCATACCAA 10941 Query 124104 AGTTTGCTCTGTTTAGAACATCACCCCATGTTGGGACGATTTTTCCGTTAGCATCAACAA 124163 ||| || | || | || || | |||| || | | | || | | |||||| | Sbjct 10940 GGTTAGCACGATTAATAATATTAGCCCAGGTATTAATTACATGACCTTGACTATCAACTA 10881 Query 124164 CTGATTGGTTAAAGTTGAAACCATTCAAGTTGAATGCCATTGTGCAGATACCCATAGAGG 124223 | |||||||| || ||||||||||| |||||||| ||||| |||| |||||| | || | Sbjct 10880 CAGATTGGTTGAAATTGAAACCATTTAAGTTGAAAGCCATAGTGCTGATACCTAAAGCAG 10821 Query 124224 TTAACCATACACATACAACAGGGAAAACTGCTAGGAAGAAGTGAAGACTTCTTGAGTTGT 124283 | ||||| | || ||| ||||| || | ||||||||||| || | | | || |||| Sbjct 10820 TGAACCAGATACCTACTACAGGCCAAGCCGCTAGGAAGAAATGTAAAGAACGAGAATTGT 10761 Query 124284 TGAATGAAGCATACTGGAAGATAAGACGACCAAAGTAACCGTGTGCTGCTACTATGTTGT 124343 |||| |||||| ||||| || | || ||||| ||||| || || ||||| || || | Sbjct 10760 TGAAACTAGCATATTGGAAAATCAATCGGCCAAAATAACCATGAGCAGCTACGATATTAT 10701 Query 124344 ATGTTTCTTCTTCTTGTCCGAACTTATAACCATAGTTCTGTGACTCTTGCTCTGTTGTTT 124403 | |||||||| ||||| ||||| | ||||| | ||| || || | ||||| |||| Sbjct 10700 AAGTTTCTTCCTCTTGACCGAATCTGTAACCTTCGTTAGCAGATTCATTTTCTGTGGTTT 10641 Query 124404 CTCTGATTAGAGAAGATGTAACAAGAGAACCATGCATTGCTGAGAATAAAGATCCTCCGA 124463 | ||||| | | ||| || || | |||||||||| || ||||| || || ||| Sbjct 10640 CCCTGATCAAACTAGAAGTTACCAAGCAACCATGCATAGCACTGAATAGGGAACCGTCGA 10581 Query 124464 ACATTCCTGCTACTCCTGCCATGTGGAAAGGATGCATTAGAATGTTATGCTCTGCTTGGA 124523 | | || ||||| ||| |||||| || || ||||| || ||||| ||||| || |||| Sbjct 10580 ATACACCAGCTACACCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGA 10521 Query 124524 AAACGAACATAAAGTTGAAAGTACCTGAGATACCAAGTGGCATACCATCAGAGAATGAAC 124583 | || | ||| |||||||||||||| || || || || |||||||| ||||| || | Sbjct 10520 ATACAATCATGAAGTTGAAAGTACCAGAAATTCCTAGAGGCATACCGTCAGAAAAGCTTC 10461 Query 124584 CCTGACCAAATGGGTATACTAAGAATACAGCGAATGCAGCAGATACTGGTGCTGAATAAG 124643 | ||||||| || |||| ||||| ||||| |||| ||| ||||| |||||||| | Sbjct 10460 CTTGACCAATGGGATATATCAAGAAAACAGCAGTTGCATCAGCAACTGGAGCTGAATATG 10401 Query 124644 CAACACAGATCCAAGGACGCATTCCTAATCTGTATGATAGTTCCCACTGTCTTCCCATGT 124703 ||||| |||||||| ||||| |||| | | | |||||||||| ||||| | Sbjct 10400 CAACAGCAATCCAAGGGCGCATACCTAGACGGAAACTAAGTTCCCACTCATGACCCATAT 10341 Query 124704 ATGCTGAAATACCAATAAGGAAGTGGAAAATTACCAACTGATAAGGACCACCATTATACA 124763 | | | ||||| | |||||| | || | | || ||||||||| ||||| || | Sbjct 10340 AACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTTATAAGGACCGCCATTGTATA 10281 Query 124764 ACCATTCATCAACAGTTGCTGCTTCCCAGATTGGGTAGAAGTGTAGTCCGATAGCGTTTG 124823 ||||||||||||| | | |||||||| |||||||| ||||| | || ||||| | Sbjct 10280 ACCATTCATCAACGGAAACAGCTTCCCATATTGGGTAAAAGTGAAAACCTATAGCTGCAG 10221 Query 124824 ATGATGGAACAACTGCACCAGAGATGATGTTGTTACCATATAAGAAAGAACCCGCTACTG 124883 | | |||| || |||||||| || || || || || || | | ||| || | || | Sbjct 10220 AAGTAGGAATAATGGCACCAGAAATAATATTATTTCCGTAAAGTAGAGATCCAGAAACAG 10161 Query 124884 GTTCTCTGATTCCGTCGATATCGACAGGAGGTGCTGCAATAAATGCAACGATGAA-ACAT 124942 |||| | || || || ||||| || ||||| | ||||| || |||| || || ||| Sbjct 10160 GTTCACGAATACCATCAATATCCACTGGAGGAGTAGCAATGAAAGCAATAATAAATACA- 10102 Query 124943 GCTGCTGCTGTGAGTAAGCATGGAATCATTAGAACACCAAACCAACCAACATAAA 124997 | | ||| || | |||| || ||||| | |||||||||||| |||| |||| Sbjct 10101 GAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAA 10047 >seq40156 Length=57058 Score = 390 bits (432), Expect = 1e-103 Identities = 709/1038 (68%), Gaps = 21/1038 (2%) Strand=Plus/Minus Query 122866 TTAAAGTGCGTTACCTCTTGGTAACACTTCTTCTGGGAATACAAAATTCTCATGCGGTTG 122925 |||||| ||||| || | |||| || || || ||||||| || || ||||| || || Sbjct 6382 TTAAAGAGCGTTTCCACGGGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTG 6323 Query 122926 GTCAACAGATGACATCCATGCTCTCATGCCTTCATTAAGAAGAATGTTCTTCGTATAGAA 122985 || || | |||||| || | ||||||||||| | |||||| || || || ||||| Sbjct 6322 ATCTTGAGCCGCCATCCAAGCACGAATGCCTTCATTTAAAAGAATATTTTTGGTGTAGAA 6263 Query 122986 AGTCTCGAACTCTGGGTCTTCTGCTGCTCTTATCTCTTGAGATACAAAGTCGTATGCTCT 123045 ||||| || || || ||||| ||||| | || || ||||| || ||||| || || | Sbjct 6262 CGTCTCAAATTCAGGATCTTCCGCTGCACGGATTTCCTGAGAAACGAAGTCATAGGCGCG 6203 Query 123046 GAGGTTAAGTGCTAGACCTACGATACCTATAGATGATGTCCACATACCCATGACAGGAAC 123105 ||||| || || | || || | || | || |||| | ||| | || || || Sbjct 6202 TAGGTTCAGAGCCAAGCCGACTACTCCAAGAGCACTCATCCATAAACCGGTTACTGGTAC 6143 Query 123106 GAACAACATAAGGAAGTGTAAGAATCTTTTGTTAGAAAATGCGATACCAAATATCTGTGA 123165 || ||||||| ||| ||||| | | ||| || ||||| || | ||||| || || || Sbjct 6142 AAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGGGA 6083 Query 123166 CCAGAATCTGTTCGCTGTAATCATACTATAAGTTTCTTCTTCCTGTGTAGGATCGAATGC 123225 ||| || | ||| || || | ||| |||||||||||| | || || || | || || Sbjct 6082 CCAAAAGCGGTTAGCGGTGACCATTGAATAAGTTTCTTCCGCTTGAGTTGGGTTAAAAGC 6023 Query 123226 TCTGAAAGTTGTAGATTGAATCTTACCTTCAGTATATTGTGATGTGTCTTCATACAATGT 123285 | ||| |||| ||| || ||| || ||||| | || || Sbjct 6022 ACGGAA---TGTAT-TTGCG-----CCATCACCAT------------CTTCAAATAAAGT 5984 Query 123286 GTTCTGCACTGTTGCACCATGAATGGCACATAGTAATGCTCCACCTAGTATTCCTGCAAC 123345 || | || || ||||||||||| || ||||| | || | || | || || ||||| Sbjct 5983 ATTTTCTACGGTAGCACCATGAATAGCGCATAGAAGGGCAGCGCCCAATACACCCGCAAC 5924 Query 123346 ACCCATCATGTGAAATGGATTCAATGTAATGTTGTGGAAACCTTGTATGAATAAGATATA 123405 |||||||| |||||||| |||||||| || || || ||||| | || | ||| | Sbjct 5923 CCCCATCATATGAAATGGGTTCAATGTCCAATTATGAAACCCTTGGAAAAAGAGGATGAA 5864 Query 123406 ACGAAAGATTGCTGCGACACCGAATGATGGTGCGAAGAACCAACTGTGCTGACCTAGTGG 123465 ||||| || ||||||||||| || || || |||||||||| ||||||||| || Sbjct 5863 TCGAAATATAGCTGCGACACCAAAACTGGGCGCAAAGAACCAACCAGACTGACCTAGCGG 5804 Query 123466 ATAGATCAGAAAGATGCTAGTGAAGACTGCGATAACAGCAGAGAATGCGAGTGCGTTGTA 123525 ||| ||||| || | | || || || || |||||||||||||| ||| || || Sbjct 5803 ATAAATCAGGAATACAGAAACAAAAACAGCAATTGGAGCAGAGAATGCGATTGCATTATA 5744 Query 123526 AGGTCTAATGCCTACAAGTCCTGCGATCTCAAATTGTCTGAGCATGAAACCTATGAGTCC 123585 ||||| | ||| || || | |||||||| | | |||||||||||| ||||| Sbjct 5743 AGGTCGCAATTGAACAGATCGAGCAAGTTCAAATTGACGTAACATGAAACCTATTAGTCC 5684 Query 123586 AAAGACTCCATGTAATGCTACAAAGTTCCATAGACCTCCGAGTTGTAACCAACGAACGAA 123645 || | || || | || ||||| |||| ||||| || | ||| |||||||| || Sbjct 5683 GAAAGCGCCGTGGAGAGCAACAAAAGTCCACAGACCGCCTAATTGACACCAACGAGTAAA 5624 Query 123646 TGATCCTTGTGCTTCAGGTCCCCAAAGGAACATGAGACTATGACCCATTGCGTCACCAGG 123705 |||||||||||| || ||||| || |||| | | || | | | | |||| Sbjct 5623 ATCTCCTTGTGCTTCTGGACCCCATAGTAACAACAAAGAGTGTGCTAAACTATTAGCAGG 5564 Query 123706 TGTGGAGACTGCTGCTGTTAAGAAGTTTGCTCCCTCAAGATATGAAGATGCAATACCATG 123765 || || ||||| || ||||||||||| || || | ||| ||| || | ||||| Sbjct 5563 AGTAGAAACTGCCGCGGTTAAGAAGTTGCAGCCTTCCAAATAGGAACTCGCCAATCCATG 5504 Query 123766 TGTATACCATGATGTAACGAAGGTAGTTCCTAAGAACCAACCACCGATTGATAGATACGC 123825 |||||||||||| || || ||||| || ||| |||||||| || | | | ||| || Sbjct 5503 TGTATACCATGAAGTTACAAAGGTTGTACCTGTAAACCAACCTCCTAACGCGAAATAAGC 5444 Query 123826 ACAAGGCAGAAGTAAAAGACCAGACCATCCTATGAATACAAAACGATCTCTCTTTAACCA 123885 |||||| | || || ||||| ||||| |||| || || ||||| || ||| |||||| Sbjct 5443 ACAAGGAAAGAGCAATAGACCGGACCAACCTACAAAAACGAAACGGTCCCTCCGTAACCA 5384 Query 123886 GTCGTCAAGAACATCAAA 123903 ||| || | || |||||| Sbjct 5383 GTCATCCATAATATCAAA 5366 >seq6232 Length=104065 Score = 129 bits (142), Expect = 7e-25 Identities = 201/285 (71%), Gaps = 2/285 (1%) Strand=Plus/Plus Query 124714 ACCAATAAGGAAGTGGAAAATTACCAACTGATAAGGACCACCATTATACAACCATTCATC 124773 ||||| | |||||| | || | | || |||||||||| |||| || ||||||||||| Sbjct 82577 ACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCATCATTGTATAACCATTCATC 82636 Query 124774 AACAGTTGCTGCTTCCCAGATTGGGTAGAAGTGTAGTCCGATAGCGTTTGATGATGGAAC 124833 ||| | | |||||||| |||||||| ||||| | || ||||| || | |||| Sbjct 82637 AACGGAACCAGCTTCCCATATTGGGTAAAAGTGCAAACCTATAGCTGCAGAAGTAGGAAT 82696 Query 124834 AACTGCACCAGAGATGATGTTGTTACCATATAAGAAAGAACCCGCTACTGGTTCTCTGAT 124893 || |||||||| || || || || || || | | ||| || | || ||||| | || Sbjct 82697 AATGGCACCAGAAATAATATTATTTCCGTAAAGTAGAGATCCAGAAACAGGTTCACGAAT 82756 Query 124894 TCCGTCGATATCGACAGGAGGTGCTGCAATAAATGCAACGATGAA-ACATGCTGCTGCTG 124952 || || ||||| || ||||| || ||||| || |||| || || ||| | | | | | Sbjct 82757 ACCATCAATATCCACCGGAGGAGCAGCAATGAAAGCAATAATAAATACA-GAAGTTACGG 82815 Query 124953 TGAGTAAGCATGGAATCATTAGAACACCAAACCAACCAACATAAA 124997 | | |||| || ||||| | ||| |||||||| |||| |||| Sbjct 82816 TCAATAAGGTAGGGATCATCAAAACGCCAAACCATCCAATGTAAA 82860 >seq5685 Length=160749 Score = 118 bits (130), Expect = 1e-21 Identities = 160/223 (72%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 124044 CAGATGCTAGGTCTAGTGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCCA 124103 |||| |||| |||||| ||||| || || ||||| | |||| ||||||||||| |||| | Sbjct 78729 CAGAAGCTAAGTCTAGAGGGAAATTATGAGCATTACGTTCACGCATAACTTCCGTACCAA 78670 Query 124104 AGTTTGCTCTGTTTAGAACATCACCCCATGTTGGGACGATTTTTCCGTTAGCATCAACAA 124163 ||| || | || | || |||| || | || | | || | | |||||| | Sbjct 78669 GGTTAGCACGATTAATAATATCAACCTAGGTATTAATTACACAACCTTGACTATCAACTA 78610 Query 124164 CTGATTGGTTAAAGTTGAAACCATTCAAGTTGAATGCCATTGTGCAGATACCCATAGAGG 124223 | |||||||| || ||||||||||| |||||||| ||||| ||| |||||| | || || Sbjct 78609 CGGATTGGTTGAAATTGAAACCATTTAAGTTGAAAGCCATAGTGTTGATACCTAAAGCGG 78550 Query 124224 TTAACCATACACATACAACAGGGAAAACTGCTAGGAAGAAGTG 124266 | ||||| | || ||| | ||| || | |||||||| || Sbjct 78549 TGAACCAAATACCTACTATAGGCCAAGCCATAAGGAAGAAATG 78507 >seq9596 Length=34882 Score = 113 bits (124), Expect = 5e-20 Identities = 194/282 (69%), Gaps = 0/282 (0%) Strand=Plus/Minus Query 122866 TTAAAGTGCGTTACCTCTTGGTAACACTTCTTCTGGGAATACAAAATTCTCATGCGGTTG 122925 |||||| | ||| || | |||| || || || ||||||| || || ||||| || || Sbjct 5642 TTAAAGAGTGTTTCCACGGGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTG 5583 Query 122926 GTCAACAGATGACATCCATGCTCTCATGCCTTCATTAAGAAGAATGTTCTTCGTATAGAA 122985 || || | |||||| || | ||||||||||| | |||||| || || || ||||| Sbjct 5582 ATCTTGAGCCGCCATCCAAGCACGAATGCCTTCATTTAAAAGAATATTTTTGGTGTAGAA 5523 Query 122986 AGTCTCGAACTCTGGGTCTTCTGCTGCTCTTATCTCTTGAGATACAAAGTCGTATGCTCT 123045 ||||| || || || ||||| ||||| | || || ||||| || ||||| || || | Sbjct 5522 CGTCTCAAATTCAGGATCTTCCGCTGCACGGATTTCCTGAGAAACGAAGTCATAGGCGCG 5463 Query 123046 GAGGTTAAGTGCTAGACCTACGATACCTATAGATGATGTCCACATACCCATGACAGGAAC 123105 ||||| || || | | || | || | || |||| | ||| | || || || Sbjct 5462 TAGGTTCAGAGCCAAGTCGACTACTCCAAGAGCACTCATCCATAAACCGGTTACTGGTAC 5403 Query 123106 GAACAACATAAGGAAGTGTAAGAATCTTTTGTTAGAAAATGC 123147 || ||||||| ||| ||||| | | ||| || ||||| || Sbjct 5402 AAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGC 5361 >seq3460 Length=21948 Score = 111 bits (122), Expect = 2e-19 Identities = 175/245 (71%), Gaps = 12/245 (5%) Strand=Plus/Minus Query 139317 TGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGT 139376 || || || ||||| || || || ||||| || || | ||||||||||| ||||| || Sbjct 17443 TGAGCAGTACAGATATTGCTAGTGGCTTTATCCCTCCGGATATGCTGCTCCCTAGTCTGC 17384 Query 139377 AGTGCTAATCTGTATGCAGGATTGCCTTCGCTG--TCCA--CTGACTGACCTACAATTCT 139432 | ||| | || |||||| || || || | || | || || ||| | |||||| Sbjct 17383 ATTGCCATTCGAAGTGCAGGCTTTCC--CGTAGAATCGATACTAAC--ACCAATAATTCT 17328 Query 139433 GCCAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCC 139492 ||||| ||| | ||||||| || | || || || |||||||||||||| ||||| || Sbjct 17327 CCCAGGCATCATCCTCTTATGCTCCTGTGAAGTAGCTAAGAATGCAGCATGGGGACCCCC 17268 Query 139493 GTATCCCATAGGAATACCAAACCTTTG--CATACTACCTACAGCAATATCAAATCCCCAC 139550 || ||||| || | ||||||||| || | || || |||||||||||| ||| | Sbjct 17267 ATAACCCATTGGCACACCAAACCTCTGAGCTGAC--CCAACAGCAATATCAGCACCCAAT 17210 Query 139551 TCACC 139555 ||||| Sbjct 17209 TCACC 17205 Score = 104 bits (114), Expect = 3e-17 Identities = 116/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918 |||||||||||| || || ||||||||||| | | || || || | ||||| ||||| Sbjct 16904 CATTGCCTCTGCCGCCGCGGTTGCTTCATCGAGCAATGAAGCATTGGACATTGGCAATCC 16845 Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978 ||||| || | || | ||||||||||||| |||| || | || ||||||||||| Sbjct 16844 AGTAAGGTCAGAGACCATGGTTTGGTAATTGAGCAAAGACTCAAGCCTGCCCTGAGATAT 16785 Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCAAC 140013 |||||| || || || || || ||| ||||||| Sbjct 16784 CTCAGCCTGGTAAGGTGTATACTGTGTATACCAAC 16750 Score = 86.0 bits (94), Expect = 7e-12 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 138294 ACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATC 138353 ||||||||||| | || || ||||| | || || ||||| ||||||||||||| ||| Sbjct 19576 ACCTGTGCATTCATGTTAGCCCCATCCATGTAAACTTGACCTCCATTGTCATGAATAATC 19517 Query 138354 TTACATATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAA 138408 |||||||||| ||| | |||| | ||||||||||| || ||||| |||| Sbjct 19516 TTACATATCTCATCAATGCCTTCTTCATACACACCATGAGTTGAAGGATAGGTAA 19462 >seq1867 Length=286035 Score = 104 bits (114), Expect = 3e-17 Identities = 173/248 (70%), Gaps = 4/248 (2%) Strand=Plus/Minus Query 139311 AGTGCTTGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTA 139370 ||| | || || ||||| || || || || || || || || | ||||||||||| || Sbjct 257321 AGTACCTGAGCAGTGCAAATATTGCTTGTAGCCTTATCCCTACGGATATGCTGCTCCCTT 257262 Query 139371 GTTTGTAGTGCTAATCTGTATGCAGGATTGCCTTCGCTGTC--CACTGACTGACCTACAA 139428 || || | ||| | || ||||| || ||| || |||| || ||| | | Sbjct 257261 GTCTGCATTGCCATTCGCAGAGCAGGCTTCCCTGAAGAATCAACACTTAC--ACCAATGA 257204 Query 139429 TTCTGCCAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGAC 139488 |||| || || ||| | ||||| |||| | || ||| || | || ||||||||||||| Sbjct 257203 TTCTCCCTGGCATCATCCTCTTGTACTCTTGTGATGTGGCCAGAAACGCAGCATGAGGAC 257144 Query 139489 CTCCGTATCCCATAGGAATACCAAACCTTTGCATACTACCTACAGCAATATCAAATCCCC 139548 |||| || |||||||||| |||||||| || | ||| ||| |||||||| ||| Sbjct 257143 CTCCATACCCCATAGGAACCCCAAACCTCTGAGCAGAACCAACAACAATATCAGCCCCCA 257084 Query 139549 ACTCACCT 139556 | |||||| Sbjct 257083 ATTCACCT 257076 Score = 95.1 bits (104), Expect = 1e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 138161 AAATGGTGTGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATG 138220 |||||||| | ||||| |||||||||||||| | ||||||||| || |||||||| Sbjct 260289 AAATGGTGCCAAGTGTTTCTTCACACCAATAGGACCCATGCCAGGACCACCTCCTCCATG 260230 Query 138221 TGGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGG 138280 ||||| || ||||| ||||| | ||| ||||| || ||||| || ||| | || || Sbjct 260229 AGGAATGCAAAATGTTTTATGGAGATTGAGATGGCAAACATCAGCTCCAATGCAACCAGG 260170 Query 138281 TTTTGCTAGACCTACCT 138297 |||| || || |||| Sbjct 260169 GTTTGTCAGTCCCACCT 260153 Score = 91.5 bits (100), Expect = 2e-13 Identities = 119/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918 |||||| || || || || ||| ||||||| | | || || |||| || || | || Sbjct 256776 CATTGCTTCAGCAGCGGCTGTTCCTTCATCAAGCAATGAAGCATTTGACATGGGGAGACC 256717 Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978 ||||| || || || | ||||| ||||| || |||| ||| | | || |||||||| Sbjct 256716 AGTAAGATCCGTAATCAAAGTTTGATAATTTAACAAAGATTCAAGACGCCCTTGAGATAT 256657 Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTC 140023 ||||||||| || || ||||| ||||||||| |||||||| Sbjct 256656 CTCAGCTTGGTAAGGTGTGTATTGAGTGTACCAAGCTGGATTCTC 256612 Score = 82.4 bits (90), Expect = 9e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 138294 ACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATC 138353 ||||||||||| | || || ||||| | ||||| ||||| ||||||||||||| ||| Sbjct 259804 ACCTGTGCATTCATGTTAGCCCCATCCATGTATACTTGACCTCCATTGTCATGAATTATC 259745 Query 138354 TTACATATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGT 138406 |||||||||| || | |||| | || |||||||| || |||||||| Sbjct 259744 TTACATATCTCATCAATACCTTCTTCATAGACTCCATGAGTTGAAGGATATGT 259692 >seq1820 Length=364577 Score = 104 bits (114), Expect = 3e-17 Identities = 173/248 (70%), Gaps = 4/248 (2%) Strand=Plus/Plus Query 139311 AGTGCTTGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTA 139370 ||| | || || ||||| || || || || || || || || | ||||||||||| || Sbjct 88034 AGTACCTGAGCAGTGCAAATATTGCTTGTAGCCTTATCCCTACGGATATGCTGCTCCCTT 88093 Query 139371 GTTTGTAGTGCTAATCTGTATGCAGGATTGCCTTCGCTGTCCACTGACTGA--CCTACAA 139428 || || | ||| | || ||||| || ||| || || ||| | || | | Sbjct 88094 GTCTGCATTGCCATTCGCAGAGCAGGCTTCCCTGAAGAATCAAC--ACTTAAACCAATGA 88151 Query 139429 TTCTGCCAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGAC 139488 |||| || || ||| | ||||| |||| | || ||| || || || ||||||||||||| Sbjct 88152 TTCTCCCTGGCATCATCCTCTTGTACTCTTGTGATGTGGCCAAAAACGCAGCATGAGGAC 88211 Query 139489 CTCCGTATCCCATAGGAATACCAAACCTTTGCATACTACCTACAGCAATATCAAATCCCC 139548 |||| || |||||||||| |||||||| || | ||| ||| |||||||| ||| Sbjct 88212 CTCCATACCCCATAGGAACCCCAAACCTCTGAGCAGAACCAACAACAATATCAGCCCCCA 88271 Query 139549 ACTCACCT 139556 | |||||| Sbjct 88272 ATTCACCT 88279 Score = 95.1 bits (104), Expect = 1e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 138161 AAATGGTGTGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATG 138220 |||||||| | ||||| |||||||||||||| | ||||||||| || |||||||| Sbjct 85119 AAATGGTGCCAAGTGTTTCTTCACACCAATAGGACCCATGCCAGGACCACCTCCTCCATG 85178 Query 138221 TGGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGG 138280 ||||| || ||||| ||||| | ||| ||||| || ||||| || ||| | || || Sbjct 85179 AGGAATGCAAAATGTTTTATGGAGATTGAGATGGCAAACATCAGCTCCAATGCAACCAGG 85238 Query 138281 TTTTGCTAGACCTACCT 138297 |||| || || |||| Sbjct 85239 GTTTGTCAGTCCCACCT 85255 Score = 91.5 bits (100), Expect = 2e-13 Identities = 119/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918 |||||| || || || || ||| ||||||| | | || || |||| || || | || Sbjct 88579 CATTGCTTCAGCAGCGGCTGTTCCTTCATCAAGCAATGAAGCATTTGACATGGGGAGACC 88638 Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978 ||||| || || || | ||||| ||||| || |||| ||| | | || |||||||| Sbjct 88639 AGTAAGATCCGTAATCAAAGTTTGATAATTTAACAAAGATTCAAGACGCCCTTGAGATAT 88698 Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTC 140023 ||||||||| || || ||||| ||||||||| |||||||| Sbjct 88699 CTCAGCTTGGTAAGGTGTGTATTGAGTGTACCAAGCTGGATTCTC 88743 Score = 82.4 bits (90), Expect = 9e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 138294 ACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATC 138353 ||||||||||| | || || ||||| | ||||| ||||| ||||||||||||| ||| Sbjct 85604 ACCTGTGCATTCATGTTAGCCCCATCCATGTATACTTGACCTCCATTGTCATGAATTATC 85663 Query 138354 TTACATATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGT 138406 |||||||||| || | |||| | || |||||||| || |||||||| Sbjct 85664 TTACATATCTCATCAATACCTTCTTCATAGACTCCATGAGTTGAAGGATATGT 85716 >seq4339 Length=576982 Score = 93.3 bits (102), Expect = 5e-14 Identities = 86/109 (79%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 138161 AAATGGTGTGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATG 138220 |||||||| | ||||| |||||||||||||| | ||||||||| || |||||||| Sbjct 338061 AAATGGTGCCAAGTGTTTCTTCACACCAATAGGACCCATGCCAGGACCACCTCCTCCATG 338120 Query 138221 TGGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCA 138269 ||||| || ||||| ||||| | ||| ||||| || ||||| || ||| Sbjct 338121 AGGAATGCAAAATGTTTTATGGAGATTGAGATGGCAAACATCAGCTCCA 338169 >seq4685 Length=19895 Score = 84.2 bits (92), Expect = 3e-11 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 124483 CATGTGGAAAGGATGCATTAGAATGTTATGCTCTGCTTGGAAAACGAACATAAAGTTGAA 124542 |||||| || || ||||| || ||||| ||||| | ||||| || | || |||||||| Sbjct 6780 CATGTGAAATGGGTGCATAAGGATGTTGTGCTCAACCTGGAATACAATCACGAAGTTGAA 6839 Query 124543 AGTACCTGAGATACCAAGTGGCATACCATCAGAGAA 124578 |||||| || || ||||| |||||||||| ||| || Sbjct 6840 AGTACCAGAAATTCCAAGAGGCATACCATTAGAAAA 6875 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578707771753120