Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Quercus_20lobata_20[genbank_20GCA_5F001633185.1_202016-04-28] 40,156 sequences; 759,241,194 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq762 96.9 5e-15 >seq762 Length=331234 Score = 96.9 bits (106), Expect = 5e-15 Identities = 139/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || || || || || |||||||||||| | || || || | | Sbjct 317138 TGCAAATTTTTGTTAAGACCTTGACTGGCAAAACAATTACTTTGGAGGTTGAGAGTTCAG 317197 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 ||||||| | ||||| ||| ||| || ||| || || || || ||||| || |||| Sbjct 317198 ATACTATCGATAATGTTAAAGCTAAGATCCAAGACAAGGAGGGTATCCCACCGGACCAAC 317257 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || || |||||||| || || || || || ||| || || ||| | ||||| |||| Sbjct 317258 AGAGGCTGATTTTTGCTGGCAAGCAGTTGGAAGATGGAAGGACCTTAGCTGATTACAATA 317317 Query 146212 TACAAAAAGAATCGAC 146227 | ||||| || || || Sbjct 317318 TTCAAAAGGAGTCAAC 317333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 785771783775520