Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Quercus_20lobata_20[genbank_20GCA_5F001633185.1_202016-04-28] 40,156 sequences; 759,241,194 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq2326 86.0 1e-11 >seq2326 Length=95029 Score = 86.0 bits (94), Expect = 1e-11 Identities = 97/132 (73%), Gaps = 11/132 (8%) Strand=Plus/Minus Query 81651 ATTCCTTCTGTATATTATAATCAGATAGAGTTCTACAGTC-----------TTCTAACAA 81699 |||||||||| ||||| ||||||| ||||| | || || ||| | ||| Sbjct 85434 ATTCCTTCTGAATATTGTAATCAGCCAGAGTGCGACCATCCTCAAGTTGTTTTCCAGCAA 85375 Query 81700 AGATTAGTCTTTGTTGACCTGGAAGTATTTCTTCCTTATCTTGAATCTTTGCTTTTATAT 81759 |||| || || || ||| ||||| | || ||||||||||||||||||||||||| | || Sbjct 85374 AGATGAGCCTCTGCTGATCTGGAGGAATCCCTTCCTTATCTTGAATCTTTGCTTTAACAT 85315 Query 81760 TTTCAATCGTAT 81771 | || || |||| Sbjct 85314 TATCTATGGTAT 85303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 902957732748160