Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Quercus_20lobata_20[genbank_20GCA_5F001633185.1_202016-04-28] 40,156 sequences; 759,241,194 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq6660 82.4 8e-11 >seq6660 Length=24805 Score = 82.4 bits (90), Expect = 8e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 23509 CATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAAT 23568 || ||||| |||||||| ||||||||||| ||| ||| | ||||| || ||||| || Sbjct 20370 CAAGCAAAGTCACAATGGAGGCCTTCATCTCTAGAAATAAGCTCATTTGAGAATGTCAAG 20311 Query 23569 CCTGGCATTAATCCTCGTTTTTTAATCCAAAATAT 23603 |||||||| | ||| | ||||||| ||| ||||| Sbjct 20310 CCTGGCATCATTCCCCTCTTTTTAAGCCAGAATAT 20276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521226239098400