Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Raphanus_20raphanistrum_20subsp._20raphanistrum_20[genbank_20GCA_5F0
00769845.1_202014-10-28] 64,732 sequences; 253,833,977 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq12321 138 2e-27
seq21470 100 6e-16
seq7507 100 6e-16
seq5662 100 6e-16
seq3164 100 6e-16
seq194 100 6e-16
seq29375 98.7 2e-15
seq16212 98.7 2e-15
seq14504 98.7 2e-15
seq6577 98.7 2e-15
seq4839 98.7 2e-15
seq3885 98.7 2e-15
seq2818 98.7 2e-15
seq1617 98.7 2e-15
seq1503 98.7 2e-15
seq1284 98.7 2e-15
seq1276 98.7 2e-15
seq1121 98.7 2e-15
seq912 98.7 2e-15
seq842 98.7 2e-15
seq635 98.7 2e-15
seq574 98.7 2e-15
seq549 98.7 2e-15
seq338 98.7 2e-15
seq318 98.7 2e-15
seq83 98.7 2e-15
seq39 98.7 2e-15
seq26161 95.1 3e-14
seq5300 95.1 3e-14
seq3099 95.1 3e-14
seq1754 95.1 3e-14
seq826 95.1 3e-14
seq589 91.5 3e-13
>seq12321
Length=6064
Score = 138 bits (152), Expect = 2e-27
Identities = 566/881 (64%), Gaps = 21/881 (2%)
Strand=Plus/Plus
Query 229753 TCTGC--GTTCCCAATCCAATATCCCGATATGTGGGATATGTACAAGAAGGCGGTGGCAA 229810
||||| ||||||||||||||| || | || ||||| |||||||||||||| | ||
Sbjct 808 TCTGCATGTTCCCAATCCAATACCCACAGATCTGGGAGATGTACAAGAAGGCCGAAGCCT 867
Query 229811 CTTTCTGGACCACTGAGGAAGT--TCCTCTGAACGCAGACGTCGTCGACTGGCGTGAGAA 229868
| ||||||||| | |||||||| ||||| || ||| ||||||| |||||
Sbjct 868 CCTTCTGGACCGCCGAGGAAGTCGACCTCT--CCGGCGACACACGCGACTGG---GAGAA 922
Query 229869 ACTCAATGACGACGAACGTCATTTCATCAAACACATCCTAGGTTTTTTCGCAGGCTCCGA 229928
||||| |||| ||| || || |||||||||||| |||| | || ||||| | ||||||
Sbjct 923 TCTCAACGACGGCGAGCGCCACTTCATCAAACACGTCCTGGCCTTCTTCGCCGCCTCCGA 982
Query 229929 TGGTATTGTGATGGAAAATCTGCAGACCAACTTTAGTGT-GGAAGTAACGGTTCCAGAGG 229987
|| || || | || ||||| || || | ||| || || ||| | ||||
Sbjct 983 CGGGATCGTCCTCGAGAATCTCGCCTCCCGGTTCA-TGTCCGACGTCCAGGTCTCCGAGG 1041
Query 229988 CACGGCAATTTTATGCTTACCAAA----CATTCAACGAATCTATCCATTCTGAACAATAT 230043
| || || || | | ||| | ||| | ||| ||||| || || |||
Sbjct 1042 CGCGTGCCTTCTACGGCTTCCAGATCGCGATTGA--GAA--CATCCACTCAGAGATGTAT 1097
Query 230044 GCTCTGCTTATCGACGCGCTTATTTCCGACGAGCAAGAACGGAACGAGCTTTTTGATGCC 230103
||| || ||||| | || ||| | | || || || | || || |||
Sbjct 1098 AGTCTCCTGCTCGACACCTACATCAAAGACAACAAGGAGAGGGACCACCTCTTCCGGGCC 1157
Query 230104 ATTGAAAACATCCCGGCGGTTCATAACAAGGCAAAGTGGGCTCAGAAATGGCTAGAACCT 230163
|| || | |||||| || || ||||| | ||||| ||| ||| | ||
Sbjct 1158 ATCGAGACCATCCCCTGCGTCGCGAAGAAGGCCCAATGGGCCATGAAGTGGATCGACGGA 1217
Query 230164 GGTAAATCGTTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCC 230223
| | | || || ||| | ||||||||| | || || ||||| || | || |||
Sbjct 1218 TCTCAGACTTTCGCGGAGAGGATCGTCGCCTTCGCCTGCGTCGAAGGGATCTTCTTCTCC 1277
Query 230224 GGGAGTTTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTG 230283
|| || |||||| | ||||| ||||| ||| || | |||||||| || |
Sbjct 1278 GGAAGCTTCTGCTCGATCTTCTGGCTCAAGAAGCGTGGGCTCATGCCTGGTCTGACCTTC 1337
Query 230284 TCTAACGAGTTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTATGTAT 230343
|| |||||| ||||| | |||||||| || || | |||| | || || |||
Sbjct 1338 TCCAACGAGCTCATCTCGAGAGACGAGGGGCTTCACTGCGATTTCGCCTGCCTGATCTAT 1397
Query 230344 TCAAAGCTCCAGAACAAGCTACCATTCGAGACGGTCAAACAAATCATTACAGAAGCAGTT 230403
| | || ||||| || ||| || || ||| | || || ||
Sbjct 1398 ACCTTATTGAGGACGAAGCTCCCGGAGGAGCGCGTGAAGTCGATCGTGTGCGACGCGGTG 1457
Query 230404 GAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTT-ATTGGCATGAACGC 230462
|| | ||| | |||||| | || ||||| |||| || ||| || | || |||||
Sbjct 1458 GAGATCGAGAGGGAGTTTGTGTGCGACGCGCTTCCGTG-CGCGTTGGTGGGGATGAATCG 1516
Query 230463 TGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTA 230522
||| || ||| | ||||| ||||| || || || || | |||| | || ||||| ||
Sbjct 1517 TGATCTGATGAGTCAGTATATCGAGTTTGTGGCGGATAGGCTTTTGGGCGCGCTTGGGTA 1576
Query 230523 CGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGG 230582
|| ||| |||||| ||| || |||| | |||||| | || |||||||| ||
Sbjct 1577 CGGGAAGGTGTACGGTGTGGCGAATCCGTTTGATTGGATGGAGTTGATCTCGCTTCAGGG 1636
Query 230583 GAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGA 230623
||||||||||||||| || ||| | || |||| || ||||
Sbjct 1637 GAAGACCAACTTCTTTGAGAAGAGGGTTGGTGATTACCAGA 1677
>seq21470
Length=2964
Score = 100 bits (110), Expect = 6e-16
Identities = 66/73 (90%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
||||||||||||||||| |||||||||| || || |||| || |||||||||||||||||
Sbjct 935 TGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 994
Query 165769 CCCCACGATGGGC 165781
||||||| |||||
Sbjct 995 CCCCACGGTGGGC 1007
>seq7507
Length=9369
Score = 100 bits (110), Expect = 6e-16
Identities = 66/73 (90%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
||||||||||||||||| |||||||||| || || |||| || |||||||||||||||||
Sbjct 4790 TGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 4731
Query 165769 CCCCACGATGGGC 165781
||||||| |||||
Sbjct 4730 CCCCACGGTGGGC 4718
>seq5662
Length=11518
Score = 100 bits (110), Expect = 6e-16
Identities = 66/73 (90%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
||||||||||||||||| |||||||||| || || |||| || |||||||||||||||||
Sbjct 5705 TGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 5646
Query 165769 CCCCACGATGGGC 165781
||||||| |||||
Sbjct 5645 CCCCACGGTGGGC 5633
>seq3164
Length=16327
Score = 100 bits (110), Expect = 6e-16
Identities = 66/73 (90%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
||||||||||||||||| |||||||||| || || |||| || |||||||||||||||||
Sbjct 2140 TGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 2199
Query 165769 CCCCACGATGGGC 165781
||||||| |||||
Sbjct 2200 CCCCACGGTGGGC 2212
>seq194
Length=43780
Score = 100 bits (110), Expect = 6e-16
Identities = 66/73 (90%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
||||||||||||||||| |||||||||| || || |||| || |||||||||||||||||
Sbjct 15542 TGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 15601
Query 165769 CCCCACGATGGGC 165781
||||||| |||||
Sbjct 15602 CCCCACGGTGGGC 15614
>seq29375
Length=1616
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 1024 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 1083
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 1084 CCCACGGTGGGC 1095
>seq16212
Length=4437
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 1588 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 1647
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 1648 CCCACGGTGGGC 1659
>seq14504
Length=5069
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 4546 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 4487
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 4486 CCCACGGTGGGC 4475
>seq6577
Length=10347
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 5513 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 5572
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 5573 CCCACGGTGGGC 5584
>seq4839
Length=12761
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 3887 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 3946
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 3947 CCCACGGTGGGC 3958
>seq3885
Length=14498
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 11293 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 11352
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 11353 CCCACGGTGGGC 11364
>seq2818
Length=17315
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 16267 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 16208
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 16207 CCCACGGTGGGC 16196
>seq1617
Length=22241
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 3142 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 3083
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 3082 CCCACGGTGGGC 3071
>seq1503
Length=22867
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 16555 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 16614
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 16615 CCCACGGTGGGC 16626
>seq1284
Length=24489
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 22612 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 22553
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 22552 CCCACGGTGGGC 22541
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/72 (89%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||||||| |||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 22347 GCCCGTCTATCTCAGTTGGTAGAGCGCAAGGCTCTTAA-CTTGTGGTCGTGGGTTCGAGC 22289
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 22288 CCCACGGTGGGC 22277
>seq1276
Length=24579
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 12289 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 12348
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 12349 CCCACGGTGGGC 12360
>seq1121
Length=25735
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 14359 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 14418
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 14419 CCCACGGTGGGC 14430
>seq912
Length=27731
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 5860 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 5801
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 5800 CCCACGGTGGGC 5789
>seq842
Length=28596
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 20322 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 20381
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 20382 CCCACGGTGGGC 20393
>seq635
Length=31415
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 25062 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 25121
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 25122 CCCACGGTGGGC 25133
>seq574
Length=32415
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 20271 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 20330
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 20331 CCCACGGTGGGC 20342
>seq549
Length=32968
Score = 98.7 bits (108), Expect = 2e-15
Identities = 144/201 (72%), Gaps = 6/201 (3%)
Strand=Plus/Plus
Query 229753 TCTGC--GTTCCCAATCCAATATCCCGATATGTGGGATATGTACAAGAAGGCGGTGGCAA 229810
||||| |||||| ||||| || || | || ||||| ||||||||||| || | ||
Sbjct 19757 TCTGCATGTTCCCGATCCACTACCCGCAGATCTGGGAGATGTACAAGAAAGCCGAAGCCT 19816
Query 229811 CTTTCTGGACCACTGAGGAAGT--TCCTCTGAACGCAGACGTCGTCGACTGGCGTGAGAA 229868
| ||||||||| | |||||||| ||||| | |||| | ||||||| | ||
Sbjct 19817 CCTTCTGGACCGCCGAGGAAGTCGACCTCT--CCCAAGACACCCGCGACTGGGAGCAAAA 19874
Query 229869 ACTCAATGACGACGAACGTCATTTCATCAAACACATCCTAGGTTTTTTCGCAGGCTCCGA 229928
||||| |||| ||| || || ||| |||||||| |||| | || ||||| | ||||||
Sbjct 19875 CCTCAACGACGGCGAGCGACACTTCGTCAAACACGTCCTCGCCTTCTTCGCCGCCTCCGA 19934
Query 229929 TGGTATTGTGATGGAAAATCT 229949
|| || || | || |||||
Sbjct 19935 CGGGATCGTCCTCGAGAATCT 19955
>seq338
Length=38006
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 25265 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 25206
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 25205 CCCACGGTGGGC 25194
>seq318
Length=38567
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 5934 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 5875
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 5874 CCCACGGTGGGC 5863
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 22849 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 22908
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 22909 CCCACGGTGGGC 22920
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 23977 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 24036
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 24037 CCCACGGTGGGC 24048
>seq83
Length=52653
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 1343 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 1402
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 1403 CCCACGGTGGGC 1414
>seq39
Length=59417
Score = 98.7 bits (108), Expect = 2e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 49897 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 49956
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 49957 CCCACGGTGGGC 49968
>seq26161
Length=2059
Score = 95.1 bits (104), Expect = 3e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || |||||||||||||||||
Sbjct 1235 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGT 1176
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 1175 CCCACGGTGGGC 1164
>seq5300
Length=12053
Score = 95.1 bits (104), Expect = 3e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || |||||||||||||||| |
Sbjct 2068 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAAC 2127
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 2128 CCCACGGTGGGC 2139
>seq3099
Length=16494
Score = 95.1 bits (104), Expect = 3e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || |||||||||||||||||
Sbjct 5205 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGA 5146
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 5145 CCCACGGTGGGC 5134
>seq1754
Length=21538
Score = 95.1 bits (104), Expect = 3e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || |||||||||||||||||
Sbjct 20492 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGT 20551
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 20552 CCCACGGTGGGC 20563
>seq826
Length=28838
Score = 95.1 bits (104), Expect = 3e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| |||||||||| || || |||| || ||||||||||||||||||
Sbjct 26921 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 26980
Query 165770 CCCACGATGGGC 165781
|||| | |||||
Sbjct 26981 CCCATGGTGGGC 26992
>seq589
Length=32226
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/72 (89%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
|||||||||||||||| | |||||||| || || |||| || ||||||||||||||||||
Sbjct 20610 GCCCGTCTAGCTCAGTTG-TAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 20668
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 20669 CCCACGTTGGGC 20680
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1056946663253160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |