Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Raphanus_20raphanistrum_20subsp._20raphanistrum_20[genbank_20GCA_5F0
00769845.1_202014-10-28] 64,732 sequences; 253,833,977 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq2241 120 4e-22
>seq2241
Length=19256
Score = 120 bits (132), Expect = 4e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 145684 AGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCG 145743
|| ||| |||||| | | || ||||| || ||||| | ||| ||||| || || ||
Sbjct 1750 AGAGGCCTCACGTGAGTTCGATACACGTGAGCATCCCCAATGACATGGATAAAATCACCA 1809
Query 145744 GGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTG 145803
|| |||| | | || || | |||| | ||||| || |||||| || |||||
Sbjct 1810 GGAACGAGATCACACACATGAGCTAGCATGCAAGTCAGAAGAGAGTAGGAAGCAATGTTA 1869
Query 145804 AAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCG 145863
|| ||||| || || ||||| ||| | || ||||| |||| ||| || |||||||||||
Sbjct 1870 AACGGCACACCAAGGCCCATATCCGCTGAACGCTGATACATCTGACACGAGAGCTCCCCT 1929
Query 145864 CCCGCCACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910
|||||||||||||||| ||| | | |||||| || || || |||||
Sbjct 1930 TCCGCCACGTAGAACTGTGCA-AACATGTGGCACGGAGGAAGCGCCAT 1976
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589599339357280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |