Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raphanus_20raphanistrum_20subsp._20raphanistrum_20[genbank_20GCA_5F0 00769845.1_202014-10-28] 64,732 sequences; 253,833,977 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq24793 116 3e-21 seq11485 116 3e-21 seq12662 113 4e-20 seq37186 107 2e-18 seq964 107 2e-18 seq1045 100 2e-16 seq20570 98.7 8e-16 seq7912 98.7 8e-16 seq3667 95.1 1e-14 seq23940 93.3 4e-14 seq7348 93.3 4e-14 seq6096 93.3 4e-14 seq4396 93.3 4e-14 seq806 91.5 1e-13 seq1703 89.7 4e-13 seq14782 87.8 2e-12 >seq24793 Length=2311 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || |||||||| || | ||||| ||| |||||||| || ||||| ||||||||| Sbjct 1387 CCACCACGGAGCCTGAGAACGAGATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCCGCC 1446 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | ||| | |||| || ||||| ||||| || | || | |||||||||||| || Sbjct 1447 AATGTTCTGCCGTCTTCAAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGG 1506 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| ||||||| ||| || | | ||| || || | |||| Sbjct 1507 ATACCCTCCTTGTCTTGGATCTTTGCTTTGACGTTGTCGATGGTGTCGGAGCTCTCCACC 1566 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | |||||| ||||| || || || || || || || || ||||| Sbjct 1567 TCTAGGGTAATCGTCTTTCCCGTCAAGGTCTTAACGAAGATCTGCAT 1613 >seq11485 Length=6519 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | ||| | || |||||||| ||||| || || ||||| Sbjct 4932 CCACCACGGAGACGGAGGACGAGATGAAGCGTAGACTCCTTCTGAATATTGTAATCCGCA 4873 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | | ||||| |||||||| || || | || ||||||||||||||| || Sbjct 4872 AGCGTGCGTCCATCCTCAAGCTGTTTACCAGCGAAGATGAGTCTCTGCTGGTCCGGAGGA 4813 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| ||||||| |||||| | | | | ||| || | ||| Sbjct 4812 ATTCCTTCCTTGTCCTGGATCTTTGCTTTCACATTGTCAATAGTGTCGGAGCTCTCAACC 4753 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| || ||||||||||| || || || |||||||| || ||||| Sbjct 4752 TCCAAAGTGATGGTCTTGCCTGTCAAAGTCTTGACAAAAATCTGCAT 4706 Score = 116 bits (128), Expect = 3e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| || || || | || |||| || | ||| |||||||| || ||||| || || | Sbjct 5162 TTCCACCACGAAGACGAAGAACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCAG 5103 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 ||| || | | ||||| |||||||| || || | || ||||||||||||||| | Sbjct 5102 CCAAAGTCCGACCATCCTCGAGCTGTTTCCCAGCGAAGATGAGTCTCTGCTGGTCCGGAG 5043 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | |||||||||||| ||||| |||||| | | ||| || ||| | |||| Sbjct 5042 GGATGCCTTCCTTGTCCTGAATCTTCGCTTTCACATTGTCGATCGTGTCAGAGCTCTCCA 4983 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||| | ||||||||| || ||||| | || ||||| || || ||||| Sbjct 4982 CTTCAAGGGTAATGGTTTTACCGGTGAGTGTCTTGACGAAAATCTGCAT 4934 Score = 98.7 bits (108), Expect = 8e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 || || | ||| | ||| |||||||| || ||||| || || |||||||| | |||| Sbjct 4689 AGTACGAGATGGAGAGTTGACTCCTTCTGGATGTTGTAATCGGCCAGGGTGCGTCCGTCT 4630 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 || ||||| || || || | || || ||||||||||| || | |||||||||||| Sbjct 4629 TCTAGCTGCTTCCCAGCGAAGATGAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTGTCC 4570 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 ||||||| || || | | | | ||| || | ||| || | || |||||| Sbjct 4569 TGGATCTTTGCCTTGACATTGTCTATAGTGTCGGAGCTCTCGACCTCGAGAGTGATGGTC 4510 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||||||| | ||||| || || |||||||| Sbjct 4509 TTGCCGGTGAGTGTTTTCACGAAAATTTGCAT 4478 >seq12662 Length=5898 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || |||||||| || | ||||| ||| |||||||| || ||||| ||||| || Sbjct 3715 CCACCACGGAGCCTGAGAACGAGATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCAGCG 3656 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || ||| | |||| || ||||| ||||| || | || | |||||||||||| || Sbjct 3655 AGAGTTCTGCCGTCTTCAAGCTGCTTGCCTGCGAAGATCAACCTCTGCTGGTCCGGTGGG 3596 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| ||||||| ||| || | | ||| || || | |||| Sbjct 3595 ATCCCCTCCTTGTCTTGGATCTTTGCTTTGACGTTGTCGATGGTGTCGGAGCTCTCCACC 3536 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | |||||| ||||| || || || || || || || || ||||| Sbjct 3535 TCTAGGGTAATCGTCTTTCCCGTCAAGGTCTTAACGAAGATCTGCAT 3489 >seq37186 Length=985 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 20972 ATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTG 21031 ||||| ||| |||||||| || ||||| |||||||||| ||| | |||| || ||||| Sbjct 6 ATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCCGCCAATGTTCTGCCGTCTTCAAGCTG 65 Query 21032 TTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTT 21091 ||||| || | || | |||||||||||| || | || |||||||| |||||| Sbjct 66 CTTGCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATACCCTCCTTGTCTTGGATCTT 125 Query 21092 TTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGT 21151 ||| || | | | | || || | |||| |||| ||||||||||||||||| Sbjct 126 AGCTTTGACATTGTCAATGGTGTCGGAGCTCTCCACCTCCAAAGTAATGGTCTTGCCGGT 185 Query 21152 TAACGTTTTGACAAATATTTGCAT 21175 || || || || || || ||||| Sbjct 186 CAATGTCTTAACGAAAATCTGCAT 209 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || |||||||| || | ||||||||| ||||||||||| ||||| ||||| || Sbjct 211 CCACCACGGAGCCTGAGAACGAGATGCAAAGTTGACTCCTTTTGGATGTTGTAGTCAGCG 270 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | || |||| ||||| ||||| ||| | || | |||||||||||| || Sbjct 271 AGAGTCCTGCCGACCTCGAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGG 330 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| ||||| || || | ||| || || | |||| Sbjct 331 ATTCCCTCCTTGTCCTGAATCTTAGCCTTGACATTATCGATGGTGTCCGAGCTCTCCACC 390 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || |||||||| ||||| | || ||||| || || ||||| Sbjct 391 TCGAGAGTGATGGTCTTTCCGGTAAGGGTCTTGACGAAGATCTGCAT 437 >seq964 Length=27231 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||| || |||||| || | ||| | ||| |||||||| || || || || || ||| Sbjct 9719 CCACCTCTCAACCTGAGAACGAGATGGAGAGTCGACTCCTTCTGGATATTGTAATCGGCC 9660 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | ||| | | ||||| |||||||| || || | || || |||||||||||| || Sbjct 9659 AAGGTACGTCCATCCTCGAGCTGTTTACCGGCGAAGATGAGCCTCTGCTGGTCCGGAGGA 9600 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| |||||| || || | ||| ||||| | ||| | Sbjct 9599 ATACCTTCCTTGTCCTGGATCTTAGCCTTGACGTTATCGATGGTATCGGAGCTCTCGACT 9540 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || |||||||||||||| | ||||| || || |||||||| Sbjct 9539 TCGAGAGTGATGGTCTTGCCGGTGAGAGTTTTCACGAAAATTTGCAT 9493 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || |||||||| || ||||| ||||| || || || | | ||||||||||| || || Sbjct 9917 GTCGACTCCTTCTGGATGTTGTAGTCAGCGAGCGTGCGACCATCCTCCAGCTGCTTACCA 9858 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| ||||||| |||||||| ||| || | ||| |||||||| |||||| || Sbjct 9857 GCAAAAATAAGCCTCTGCTGATCCGGAGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTG 9798 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | | | ||| || | ||| |||| || |||||||| || || || || Sbjct 9797 ACATTGTCAATAGTGTCGGAGCTCTCAACCTCCAGAGTGATGGTCTTTCCCGTCAAAGTC 9738 Query 21159 TTGACAAATATTTGCAT 21175 ||||| || || ||||| Sbjct 9737 TTGACGAAGATCTGCAT 9721 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 20948 TCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGC 21007 ||| || || || | || |||| || | || |||||||| || || || ||||| || Sbjct 10632 TCCACCACGAAGACGAAGAACCAAGTGAAGCGTCGACTCCTTCTGGATATTGTAGTCAGC 10573 Query 21008 CAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGG 21067 || || | | ||||| ||||| || || || | || |||||||| |||||| || Sbjct 10572 AAGCGTGCGACCATCCTCAAGCTGCTTACCAGCGAAGATGAGTCTCTGTTGGTCCGGAGG 10513 Query 21068 CACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGT 21127 | ||||||||||| || || ||||| | | ||| || || | ||| Sbjct 10512 GATCCCTTCCTTGTCCTGAATTTTAGCCTTCACATTGTCGATTGTGTCTGAGCTCTCAAC 10453 Query 21128 TTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||||| |||||| |||||||| || | || || ||||| |||||||| Sbjct 10452 TTCCAAGGTAATAGTCTTGCCTGTCAGAGTCTTCACAAAGATTTGCAT 10405 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 ||||| | ||||| || ||||| || |||||||| ||||| || || || | | ||| Sbjct 10160 AGCACAAGATGCAGCGTAGACTCTTTCTGAATGTTGTAGTCAGCTAGCGTGCGTCCATCC 10101 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 |||||||| || || ||| | || || |||||||||||| || | || || || || Sbjct 10100 TCCAGCTGCTTACCGGCAAAGATGAGCCTCTGCTGGTCCGGTGGGATACCCTCTTTATCC 10041 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 |||||| || || | | | | || || | ||| |||| || ||||| Sbjct 10040 TGGATCTTAGCCTTGACGTTGTCAATGGTGTCTGAGCTCTCAACCTCCAAAGTGATGGTT 9981 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || ||||| | || |||||||| |||||||| Sbjct 9980 TTACCGGTGAGGGTCTTGACAAAGATTTGCAT 9949 >seq1045 Length=26565 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | || | ||| |||||||| || ||||| ||||| || Sbjct 2792 CCACCGCGGAGACGGAGGACGAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCG 2851 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | ||||||| |||||||| || || | || || | |||||||||| || Sbjct 2852 AGGGTGCGCCCGTCCTCGAGCTGTTTCCCGGCGAAGATCAGCCGCTGCTGGTCCGGAGGG 2911 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| |||||| || || | | ||| || || || ||| Sbjct 2912 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGACTCGACC 2971 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178 || | ||| || ||||| || |||| ||||| || || || ||||| || Sbjct 2972 TCGAGGGTGATTGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 3021 >seq20570 Length=3172 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || |||||||| || | ||||||||| |||||||| || ||||| ||||| || Sbjct 64 CCTCCACGAAGCCTGAGGACGAGATGCAAAGTTGACTCCTTCTGGATGTTGTAGTCAGCA 123 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | ||||| || || ||||| ||| | || | ||||||||||| || Sbjct 124 AGAGTCCTTCCATCCTCGAGTTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGTGGG 183 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || ||||| || |||||| || || | | | | ||| || | |||| Sbjct 184 ATCCCCTCCTTATCCTGGATCTTAGCCTTAACGTTGTCAATAGTGTCGGAGCTCTCCACC 243 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| || || ||||| ||||| || || |||||||| || ||||| Sbjct 244 TCCAAAGTGATTGTCTTTCCGGTCAATGTCTTGACAAAGATCTGCAT 290 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 20966 CACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTC 21025 ||||| || | || |||||||| || ||||| ||||| |||| |||| ||||||| Sbjct 309 CACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCCAAGGTTCTCCCGTCCTC 368 Query 21026 CAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGC 21085 || ||| || || || | ||||| |||||||| ||| || | ||||||||||| Sbjct 369 CAACTGCTTTCCTGCGAAGATAAGCCTCTGCTGATCCGGAGGAATCCCTTCCTTGTCCTG 428 Query 21086 GATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTT 21145 |||||| || || | | ||| || ||| | ||| || | ||| || ||||| Sbjct 429 GATCTTGGCCTTAACGTTGTCGATGGTGTCAGAGCTTTCCACCTCGAGGGTGATTGTCTT 488 Query 21146 GCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || || | ||||| || || || ||||| Sbjct 489 TCCTGTGAGAGTTTTCACGAAGATCTGCAT 518 >seq7912 Length=9007 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | | ||||| || | |||||||||||||| ||||| ||||| || Sbjct 6336 CCTCCACGCAGACGCAACACCAAGTGAAGTGTGGACTCCTTTTGGATGTTGTAGTCGGCT 6395 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | ||| | | ||||| |||||||| || || | || || |||||||||||| || Sbjct 6396 AAGGTGCGACCATCCTCAAGCTGTTTCCCAGCGAAGATGAGCCTCTGCTGGTCCGGAGGG 6455 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| |||||| || || | | | | || || | ||| Sbjct 6456 ATACCCTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCAACC 6515 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||||||||||| || || || || |||||||| || ||||| Sbjct 6516 TCCAAAGTAATGGTCTTTCCAGTCAAAGTCTTGACAAAGATCTGCAT 6562 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 20966 CACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTC 21025 ||||| || | |||||||||||||| || || ||||| || | ||| | | ||||| Sbjct 6125 CACCAAGTGAAGTGTGGACTCCTTTTGGATATTGTAGTCGGCTAAGGTGCGACCATCCTC 6184 Query 21026 CAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGC 21085 ||||| ||||| || | || || | |||||||||| || | |||||||| || Sbjct 6185 AAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTATCCTG 6244 Query 21086 GATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTT 21145 |||||| || || | | | | || ||| | |||| |||| || |||||||| Sbjct 6245 GATCTTGGCCTTGACATTGTCAATGGTGTCAGAGCTCTCCACCTCCAACGTGATGGTCTT 6304 Query 21146 GCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||||| | || |||||||| || ||||| Sbjct 6305 GCCGGTAAGTGTCTTGACAAAGATCTGCAT 6334 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || |||||||| || | ||| | || ||||||||||| ||||| ||||| ||| Sbjct 6564 CCACCACGAAGCCTGAGAACGAGATGAAGCGTAGACTCCTTTTGGATGTTGTAGTCTGCC 6623 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | ||| | |||| || ||||| ||||| || | || || |||||||| || || Sbjct 6624 AATGTTCTGCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGATCGGGAGGG 6683 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| ||||| ||| || | | ||| || || | ||| Sbjct 6684 ATACCTTCCTTGTCCTGAATCTTGGCTTTGACGTTGTCGATTGTGTCGGAGCTTTCCACC 6743 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| |||||||| || || | || || || || || ||||| Sbjct 6744 TCGAGGGTGATGGTCTTTCCCGTGAGAGTCTTAACGAAGATCTGCAT 6790 >seq3667 Length=14967 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | || | ||| |||||||| || ||||| ||||| || Sbjct 5495 CCACCGCGGAGACGGAGGACGAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCG 5554 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | ||||||| |||||||| || || | || || | |||||||||| || Sbjct 5555 AGGGTGCGCCCGTCCTCGAGCTGTTTCCCGGCGAAGATCAGCCGCTGCTGGTCCGGAGGG 5614 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| |||||| ||| || | | ||| || || | || Sbjct 5615 ATGCCTTCCTTGTCCTGGATCTTGGCTTTGACATTGTCGATGGTGTCGGAAGATTCGACC 5674 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178 || | ||| || ||||| || |||| ||||| || || || ||||| || Sbjct 5675 TCGAGGGTGATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 5724 >seq23940 Length=2465 Score = 93.3 bits (102), Expect = 4e-14 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 20948 TCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGC 21007 ||| |||| ||| | ||| |||| || | || |||||||| || ||||| ||||| || Sbjct 2300 TCCTCCTCTCAGACGGAGAACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 2359 Query 21008 CAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGG 21067 ||||| | ||||||| ||||| || || || |||| || | |||||||||| || Sbjct 2360 GAGGGTGCGTCCGTCCTCGAGCTGCTTTCCGGCGAAAATGAGGCGCTGCTGGTCCGGAGG 2419 Query 21068 CACGCCTTCCTTGTCGGCGATCTT 21091 | |||||||||||| |||||| Sbjct 2420 GATGCCTTCCTTGTCTTGGATCTT 2443 >seq7348 Length=9517 Score = 93.3 bits (102), Expect = 4e-14 Identities = 153/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || ||||||||||||| || | || |||||||| || ||||| ||||| || Sbjct 223 CCACCACGAAGCCTGAGCACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCA 164 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | | ||||| ||||| || || || | || || | |||||||||| || Sbjct 163 AGAGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 104 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| |||||| ||||| | | | | || || | ||| | Sbjct 103 ATACCTTCCTTGTCCTGGATCTTAGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCAACT 44 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATAT 21169 |||| || |||||||||||||| | || || || || || Sbjct 43 TCCAATGTGATGGTCTTGCCGGTAAGAGTCTTCACGAAGAT 3 >seq6096 Length=10951 Score = 93.3 bits (102), Expect = 4e-14 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 20948 TCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGC 21007 ||| |||| ||| | ||| |||| || | || |||||||| || ||||| ||||| || Sbjct 10774 TCCTCCTCTCAGACGGAGAACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 10833 Query 21008 CAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGG 21067 ||||| | ||||||| ||||| || || || |||| || | |||||||||| || Sbjct 10834 GAGGGTGCGTCCGTCCTCGAGCTGCTTTCCGGCGAAAATGAGGCGCTGCTGGTCCGGAGG 10893 Query 21068 CACGCCTTCCTTGTCGGCGATCTT 21091 | |||||||||||| |||||| Sbjct 10894 GATGCCTTCCTTGTCTTGGATCTT 10917 >seq4396 Length=13502 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| || ||||| | | ||||| || | || |||||||| || ||||||||||| | Sbjct 330 TTCCTCCACGCAGACGCAACACCAAGTGAAGTGTAGACTCCTTCTGGATGTTATAGTCAG 271 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 ||| ||| | | ||||| ||||| ||||| || | || || | |||||||||| | Sbjct 270 CCAAGGTGCGACCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGTG 211 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | || |||||||| ||||| || || | | | | || || | ||| Sbjct 210 GGATTCCCTCCTTGTCCTGAATCTTAGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCAA 151 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||| | ||| || ||||| ||||||| || |||||||| || ||||| Sbjct 150 CTTCGAGGGTGATTGTCTTTCCGGTTAGTGTCTTGACAAAGATCTGCAT 102 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || |||||||| || | ||| | || ||||| ||||| ||||| ||||| || Sbjct 12057 CCACCACGGAGCCTGAGGACAAGATGAAGGGTCGACTCTTTTTGGATGTTGTAGTCAGCG 11998 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | | || || || || || || || | ||||| |||||||| ||| ||| Sbjct 11997 AGAGTACGCCCATCTTCAAGTTGCTTCCCGGCGAAGATAAGCCTCTGCTGATCCGGGGGA 11938 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| ||||| ||| || | | ||| || || | ||| Sbjct 11937 ATGCCTTCCTTGTCCTGAATCTTGGCTTTAACGTTGTCGATGGTGTCTGAGCTTTCCACC 11878 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178 || | ||| || ||||| ||||| | || || || ||||| ||||| || Sbjct 11877 TCGAGGGTGATCGTCTTTCCGGTGAGAGTCTTAACGAATATCTGCATCTT 11828 >seq806 Length=29032 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | ||| | || |||||||| || ||||| ||||| || Sbjct 17950 CCACCACGGAGACGGAGGACGAGATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 18009 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || |||| || ||||| || || || | || |||| |||||||||| || Sbjct 18010 AGTGTGCGGCCGTCTTCGAGCTGCTTCCCGGCGAAGATCAGTCGCTGCTGGTCCGGCGGG 18069 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| |||||| || || | | ||| || || || ||| Sbjct 18070 ATCCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGACTCGACC 18129 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178 || | ||| || ||||| || |||| ||||| || || || ||||| || Sbjct 18130 TCGAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 18179 >seq1703 Length=21771 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| |||| || | ||| |||||||| || || || ||||| ||| Sbjct 17912 CCACCACGGAGACGGAGGACCAAGTGAAGAGTCGACTCCTTCTGGATATTGTAGTCTGCC 17971 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | ||| | | ||||| ||||| || || || | || || | |||||| ||| || Sbjct 17972 AAGGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCCGGAGGG 18031 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| |||||| ||||| | | | | ||| ||| | ||| Sbjct 18032 ATACCTTCCTTGTCCTGGATCTTAGCCTTCACGTTGTCAATAGTGTCAGAGCTCTCAACC 18091 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| || || ||||| ||||| | || |||||||| || ||||| Sbjct 18092 TCCAATGTGATAGTCTTCCCGGTAAGAGTCTTGACAAAGATCTGCAT 18138 >seq14782 Length=4961 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 20948 TCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGC 21007 ||| |||| ||| | ||| |||| || | ||| |||||||| || ||||| || ||||| Sbjct 1968 TCCTCCTCTCAGACGGAGAACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCCGC 2027 Query 21008 CAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGG 21067 ||||| |||| |||||||| || || || | || || | |||||||||| || Sbjct 2028 GAGGGTCCTTCCGTCTTCCAGCTGCTTCCCGGCGAAGATCAGACGCTGCTGGTCCGGTGG 2087 Query 21068 CACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGT 21127 | ||||||||||| ||||| || || | | ||| || || | || Sbjct 2088 GATCCCTTCCTTGTCCTGAATCTTGGCCTTGACATTGTCGATCGTGTCGGATGATTCGAC 2147 Query 21128 TTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178 || | ||| || ||||| || |||| ||||| || || || |||||||| Sbjct 2148 CTCTAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATTTT 2198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421926070744112