Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Raphanus_20raphanistrum_20subsp._20raphanistrum_20[genbank_20GCA_5F0
00769845.1_202014-10-28] 64,732 sequences; 253,833,977 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq11485 116 2e-21
seq3667 113 3e-20
seq1045 105 4e-18
seq14782 100 2e-16
seq7348 98.7 6e-16
seq806 98.7 6e-16
seq25552 95.1 8e-15
seq20570 91.5 1e-13
seq7912 91.5 1e-13
seq4396 91.5 1e-13
seq964 87.8 1e-12
seq2054 86.0 4e-12
seq1703 84.2 1e-11
>seq11485
Length=6519
Score = 116 bits (128), Expect = 2e-21
Identities = 141/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|| ||||| |||||||| |||| ||| || |||| || | |||||| || |||||
Sbjct 4668 TCCTTCTGGATGTTGTAATCGGCCAGGGTGCGTCCGTCTTCTAGCTGCTTCCCAGCGAAG 4609
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318
||||||| |||||||||| || | || |||||||| |||||| ||| | || |
Sbjct 4608 ATGAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTTGCCTTGACATTG 4549
Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378
|||| | |||| ||||| || | |||||||| ||||||||||| ||||||||
Sbjct 4548 TCTATAGTGTCGGAGCTCTCGACCTCGAGAGTGATGGTCTTGCCGGTGAGTGTTTTCACG 4489
Query 34379 AAGATCTGCATC 34390
|| || ||||||
Sbjct 4488 AAAATTTGCATC 4477
>seq3667
Length=14967
Score = 113 bits (124), Expect = 3e-20
Identities = 164/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| ||||| || | || || ||||| | |||| || ||||| |||||||||||||
Sbjct 5495 CCACCGCGGAGACGGAGGACGAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCG 5554
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| || |||| || | ||| || || ||||| || |||||||||||||| ||
Sbjct 5555 AGGGTGCGCCCGTCCTCGAGCTGTTTCCCGGCGAAGATCAGCCGCTGCTGGTCCGGAGGG 5614
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGAC 34341
| || |||||||| ||| || ||||| | || | | || | |||| ||||||||
Sbjct 5615 ATGCCTTCCTTGTCCTGGATC-TTGGCTTTGACATTGTCGATGGTGTCGGAAGATTCGAC 5673
Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|| | ||||| || || || || || |||||||| ||||||||||||
Sbjct 5674 CTCGAGGGTGATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATC 5722
>seq1045
Length=26565
Score = 105 bits (116), Expect = 4e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| ||||| || | || || ||||| | |||| || ||||| |||||||||||||
Sbjct 2792 CCACCGCGGAGACGGAGGACGAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCG 2851
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| || |||| || | ||| || || ||||| || |||||||||||||| ||
Sbjct 2852 AGGGTGCGCCCGTCCTCGAGCTGTTTCCCGGCGAAGATCAGCCGCTGCTGGTCCGGAGGG 2911
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || |||||||| ||||| ||| | | | | || | |||| || |||||
Sbjct 2912 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGACTCGACC 2971
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|| | ||||| || || || || || |||||||| ||||||||||||
Sbjct 2972 TCGAGGGTGATTGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATC 3019
>seq14782
Length=4961
Score = 100 bits (110), Expect = 2e-16
Identities = 161/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221
||| || | ||| | || |||||||| | ||| || ||||| |||||||| || |
Sbjct 1968 TCCTCCTCTCAGACGGAGAACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCCGC 2027
Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGT-CGACGG 34280
|| | |||| |||| |||||| || ||||| || || |||||||||| || ||
Sbjct 2028 GAGGGTCCTTCCGTCTTCCAGCTGCTTCCCGGCGAAGATCAGACGCTGCTGGTCCGGTGG 2087
Query 34281 GCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGA 34340
| | || |||||||| ||||| ||| | || | | |||| |||| |||||||
Sbjct 2088 GATCCCT-TCCTTGTCCTGAATCTTGGCCTTGACATTGTCGATCGTGTCGGATGATTCGA 2146
Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
| || | || || || || || || || |||||||| |||||||||||
Sbjct 2147 CCTCTAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 2195
>seq7348
Length=9517
Score = 98.7 bits (108), Expect = 6e-16
Identities = 159/225 (71%), Gaps = 4/225 (2%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || || ||||| ||||||| ||| | || || ||||| |||||||||||||
Sbjct 223 CCACCACGAAGCCTGAGCACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCA 164
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC--GACGG 34280
|| || | || || | |||||| || ||||| ||||| ||||||||||| || ||
Sbjct 163 AGAGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 104
Query 34281 GCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGA 34340
|| || |||||||| ||||| ||| | | | | || | |||| || |
Sbjct 103 ATAC-CT-TCCTTGTCCTGGATCTTAGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCAA 46
Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCT 34385
| |||| |||||||| |||||||| ||||| ||||| |||||||
Sbjct 45 CTTCCAATGTGATGGTCTTGCCGGTAAGAGTCTTCACGAAGATCT 1
>seq806
Length=29032
Score = 98.7 bits (108), Expect = 6e-16
Identities = 139/193 (72%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|| ||||| ||||||||||||| || ||| |||| || | |||||| || |||||
Sbjct 17986 TCCTTCTGGATGTTGTAGTCGGCGAGTGTGCGGCCGTCTTCGAGCTGCTTCCCGGCGAAG 18045
Query 34259 ATGAGCCGCTGCTGGT-CGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317
|| || |||||||||| || |||| | || |||||||| ||||| ||| | |
Sbjct 18046 ATCAGTCGCTGCTGGTCCGGCGGGATCCCT-TCCTTGTCCTGGATCTTGGCCTTGACGTT 18104
Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377
| | || | |||| || ||||| || | || || || || || || || ||||||||
Sbjct 18105 GTCGATGGTGTCGGAGGACTCGACCTCGAGGGTTATCGTCTTCCCCGTTAGGGTTTTCAC 18164
Query 34378 AAAGATCTGCATC 34390
||||||||||||
Sbjct 18165 GAAGATCTGCATC 18177
>seq25552
Length=2169
Score = 95.1 bits (104), Expect = 8e-15
Identities = 142/197 (72%), Gaps = 6/197 (3%)
Strand=Plus/Minus
Query 34200 CTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAA 34259
||||||| ||||||||||| | || |||| | || || | ||| || || ||||| |
Sbjct 434 CTTTCTGGATGTTGTAGTCAGCCAAAGTACGGCCATCTTCGAGCTGTTTACCGGCGAAGA 375
Query 34260 TGAGCCGCTGCTGGTC--GACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGAT 34316
| || |||||||| || || || || ||| ||||| ||||| ||||| | ||
Sbjct 374 TCAGACGCTGCTGATCCGGAGGGATACCTTCT--TTGTCTTGGATCTTG-GCTTTGACAT 318
Query 34317 CGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCA 34376
| | || | |||| || ||||| || | |||||||| ||||| || || |||||||
Sbjct 317 TGTCGATGGTGTCGGAGGACTCGACTTCGAGAGTGATGGTCTTGCCCGTTAGGGTTTTCA 258
Query 34377 CAAAGATCTGCATCGCT 34393
| |||||||||||| ||
Sbjct 257 CGAAGATCTGCATCTCT 241
>seq20570
Length=3172
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || || || | || ||||| ||| | ||| || ||||| ||||||||||| | |
Sbjct 292 CCACCACGTAGACGCAACACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCC 351
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
| | |||| ||||||||||| |||||||| || |||| |||||| || ||
Sbjct 352 AAGGTTCTCCCGTCCTCCAACTGCTTTCCTGCGAAGATAAGCCTCTGCTGATCCGGAGGA 411
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | |||||||| ||||| ||| | | | | || | || | ||| ||
Sbjct 412 ATCCCTTCCTTGTCCTGGATCTTGGCCTTAACGTTGTCGATGGTGTCAGAGCTTTCCACC 471
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|| | ||||| || || || |||||||||||||| ||||||||||||
Sbjct 472 TCGAGGGTGATTGTCTTTCCTGTGAGAGTTTTCACGAAGATCTGCATC 519
>seq7912
Length=9007
Score = 91.5 bits (100), Expect = 1e-13
Identities = 171/244 (70%), Gaps = 7/244 (3%)
Strand=Plus/Plus
Query 34149 AGATTTCGTCGAATCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTA 34208
|||||| | ||| || || || || | || ||||| ||| | || || || || |
Sbjct 6095 AGATTTT-TAGAAACCACCACGAAGACGCAACACCAAGTGAAGTGTGGACTCCTTTTGGA 6153
Query 34209 TGTTGTAGTCGGACA-GCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGC 34267
| |||||||||| | | || || | || || | ||||||||| ||||| ||||| |||
Sbjct 6154 TATTGTAGTCGGCTAAGGTG-CGACCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGC 6212
Query 34268 TGCTGGTC--GACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCG 34325
|||||||| || || || || ||||| || ||||| ||| | || | | || |
Sbjct 6213 TGCTGGTCCGGAGGGATAC-CT-TCCTTATCCTGGATCTTGGCCTTGACATTGTCAATGG 6270
Query 34326 AATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCT 34385
|| | || || |||| ||||||||| |||||||| || || || ||||||||||
Sbjct 6271 TGTCAGAGCTCTCCACCTCCAACGTGATGGTCTTGCCGGTAAGTGTCTTGACAAAGATCT 6330
Query 34386 GCAT 34389
||||
Sbjct 6331 GCAT 6334
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || || ||||| || || || || | ||| || || || ||||||||||| | |
Sbjct 6564 CCACCACGAAGCCTGAGAACGAGATGAAGCGTAGACTCCTTTTGGATGTTGTAGTCTGCC 6623
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
| | | |||| || | ||||||||| ||||| ||||||| |||||| ||| ||
Sbjct 6624 AATGTTCTGCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGATCGGGAGGG 6683
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGAC 34341
| | |||||||| ||| || ||||| | | | | || | |||| ||| ||
Sbjct 6684 ATACCTTCCTTGTCCTGAATC-TTGGCTTTGACGTTGTCGATTGTGTCGGAGCTTTCCAC 6742
Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|| | |||||||| || || |||||||| || || ||||||||||||
Sbjct 6743 CTCGAGGGTGATGGTCTTTCCCGTGAGAGTCTTAACGAAGATCTGCATC 6791
>seq4396
Length=13502
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221
||| || ||||| | || ||||| ||| | ||| || ||||| ||||| ||||| |
Sbjct 329 TCCTCCACGCAGACGCAACACCAAGTGAAGTGTAGACTCCTTCTGGATGTTATAGTCAGC 270
Query 34222 CA-GCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGG 34280
|| | || || | || || | ||||||||| ||||| ||||| ||||||||||| |
Sbjct 269 CAAGGTG-CGACCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGTG 211
Query 34281 GCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGA 34340
| | | ||||||||| ||||| ||| | | | | || | |||| || |
Sbjct 210 GGATTCCCTCCTTGTCCTGAATCTTAGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCAA 151
Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
| || | ||||| || || ||||| || || || ||||||||||||||
Sbjct 150 CTTCGAGGGTGATTGTCTTTCCGGTTAGTGTCTTGACAAAGATCTGCAT 102
Score = 87.8 bits (96), Expect = 1e-12
Identities = 160/232 (69%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 34159 GAATCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTC 34218
||| || || ||||| | | ||||| ||| | || |||||||| |||||||| ||
Sbjct 12721 GAAACCACCACGCAGACGTAACACCAAGTGAAGGGTTGACTCTTTCTGAATGTTGTAATC 12662
Query 34219 GGACA-GCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGA 34277
| || | || || | || || | ||||||||| ||||| ||||| |||||||||||
Sbjct 12661 AGCCAAGGTG-CGACCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCG 12603
Query 34278 CGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATT 34337
|| | | ||||||||| ||||| ||| | | | | || | |||| |
Sbjct 12602 GTGGGATCCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTCT 12543
Query 34338 CGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
| || |||| ||||| || || ||||| || || || ||||| ||||||||
Sbjct 12542 CCACCTCCAAAGTGATAGTCTTCCCGGTCAGTGTCTTAACAAAAATCTGCAT 12491
>seq964
Length=27231
Score = 87.8 bits (96), Expect = 1e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || | || ||| || || || || | ||| || ||||| || ||||| |||| |
Sbjct 9719 CCACCTCTCAACCTGAGAACGAGATGGAGAGTCGACTCCTTCTGGATATTGTAATCGGCC 9660
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
| ||| | || || | ||| || || ||||| ||||||| ||||||||| ||
Sbjct 9659 AAGGTACGTCCATCCTCGAGCTGTTTACCGGCGAAGATGAGCCTCTGCTGGTCCGGAGGA 9600
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | |||||||| ||||| ||| | | | || | ||||| |||||
Sbjct 9599 ATACCTTCCTTGTCCTGGATCTTAGCCTTGACGTTATCGATGGTATCGGAGCTCTCGACT 9540
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|| | |||||||| |||||||||||||||||||| || || ||||||
Sbjct 9539 TCGAGAGTGATGGTCTTGCCGGTGAGAGTTTTCACGAAAATTTGCATC 9492
Score = 84.2 bits (92), Expect = 1e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|| ||||| ||||||||||| | ||| || | || |||| |||||| || || |||
Sbjct 9911 TCCTTCTGGATGTTGTAGTCAGCGAGCGTGCGACCATCCTCCAGCTGCTTACCAGCAAAA 9852
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318
|| |||| |||||| || || | || ||||||||| ||||| ||| | || |
Sbjct 9851 ATAAGCCTCTGCTGATCCGGAGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACATTG 9792
Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378
| || | |||| || || |||| |||||||| || || || | ||| || ||
Sbjct 9791 TCAATAGTGTCGGAGCTCTCAACCTCCAGAGTGATGGTCTTTCCCGTCAAAGTCTTGACG 9732
Query 34379 AAGATCTGCAT 34389
|||||||||||
Sbjct 9731 AAGATCTGCAT 9721
>seq2054
Length=20018
Score = 86.0 bits (94), Expect = 4e-12
Identities = 137/193 (71%), Gaps = 4/193 (2%)
Strand=Plus/Plus
Query 34200 CTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAA 34259
||||||| ||||||||||| | || |||| | || || | ||| || || ||||| |
Sbjct 3204 CTTTCTGGATGTTGTAGTCAGCCAAAGTACGGCCATCTTCGAGCTGTTTACCGGCGAAGA 3263
Query 34260 TGAGCCGCTGCTGGTC--GACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317
| | | |||||| || || || || || || ||||| ||||| ||| | ||
Sbjct 3264 TCAATCTCTGCTGATCTGGAGGGATAC-CT-TCTTTGTCTTGGATCTTGGCCTTGACATT 3321
Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377
| | || | |||| || ||||| || | |||||||| || ||||| || ||||||||
Sbjct 3322 GTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTTCCGGTTAGGGTTTTCAC 3381
Query 34378 AAAGATCTGCATC 34390
||||||||||||
Sbjct 3382 GAAGATCTGCATC 3394
>seq1703
Length=21771
Score = 84.2 bits (92), Expect = 1e-11
Identities = 162/231 (70%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || || || | || |||| ||| | ||| || ||||| || ||||| |||| |
Sbjct 18824 CCTCCACGTAGACGCAAGACCAAGTGAAGCGTAGACTCCTTCTGGATATTGTAATCGGCC 18883
Query 34223 A-GCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC-GACGG 34280
| | || || | || || | |||||| || ||||| ||||| |||||||| || | ||
Sbjct 18884 AAGGTG-CGACCATCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGAGG 18942
Query 34281 GCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCG 34339
| | || |||||||| ||||| ||||| | | | | || | |||| |||
Sbjct 18943 GATCCCT-TCCTTGTCCTGGATCTTG-GCTTTCACGTTGTCGATGGTGTCGGAGCTTTCC 19000
Query 34340 ACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390
|| || | ||||| || || ||||||||||||||||| ||||| ||||||
Sbjct 19001 ACCTCGAGGGTGATTGTCTTCCCGGTGAGAGTTTTCACGAAGATTTGCATC 19051
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 322817121633920
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