Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Raphanus_20raphanistrum_20subsp._20raphanistrum_20[genbank_20GCA_5F0
00769845.1_202014-10-28] 64,732 sequences; 253,833,977 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq27908 84.2 5e-11
>seq27908
Length=1802
Score = 84.2 bits (92), Expect = 5e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 248809 GATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATT 248868
||||| || || || | ||||| |||||||| || |||| || || ||| | ||| |
Sbjct 1238 GATTTTGAATATGACTACTTTGGATTCAAAACTCTTGAGAGGTCATACCTCTTGAAAGTC 1179
Query 248869 GATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCAC 248928
||||||| |||| ||| | |||||||||| | ||| | || |||| |||||||||
Sbjct 1178 CATGGCAAAGTCGTTGAAAGGCCTCAGCACATGCTCATGAGGGTCTCTGTTGGGATTCAC 1119
Query 248929 AAGGATGACATAGA 248942
|| || ||||| ||
Sbjct 1118 AAAGAAGACATTGA 1105
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1072875840965376
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |