Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Raphanus_20raphanistrum_20subsp._20raphanistrum_20[genbank_20GCA_5F0
00769845.1_202014-10-28] 64,732 sequences; 253,833,977 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq964 125 6e-24
seq24793 118 8e-22
seq7912 118 8e-22
seq1703 111 1e-19
seq7348 105 5e-18
seq4396 104 2e-17
seq3667 104 2e-17
seq1045 104 2e-17
seq37186 102 6e-17
seq12662 100 2e-16
seq20570 93.3 3e-14
seq11485 89.7 4e-13
seq23940 87.8 1e-12
seq6096 87.8 1e-12
seq1346 82.4 6e-11
>seq964
Length=27231
Score = 125 bits (138), Expect = 6e-24
Identities = 153/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||||||| ||||| ||||||||| || |||||||| || |||| | || ||
Sbjct 10613 ACCAAGTGAAGCGTCGACTCCTTCTGGATATTGTAGTCAGCAAGCGTGCGACCATCCTCA 10554
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || || ||||| || | | ||||||||| ||||| | || ||||||||| |
Sbjct 10553 AGCTGCTTACCAGCGAAGATGAGTCTCTGTTGGTCCGGAGGGATCCCTTCCTTGTCCTGA 10494
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
||||| ||| || | | |||| | ||| || |||| |||||| ||||||
Sbjct 10493 ATTTTAGCCTTCACATTGTCGATTGTGTCTGAGCTCTCAACTTCCAAGGTAATAGTCTTG 10434
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| ||||||||||||||||||||||||||
Sbjct 10433 CCTGTCAGAGTCTTCACAAAGATTTGCAT 10405
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168
||||||||| | || | || | |||||||| ||| |||||||||||||||||
Sbjct 10176 GCCACCTCTGAGTCGAAGCACAAGATGCAGCGTAGACTCTTTCTGAATGTTGTAGTCAGC 10117
Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228
|| ||| | || ||||| || || ||||| || || | || ||| ||||| || ||
Sbjct 10116 TAGCGTGCGTCCATCCTCCAGCTGCTTACCGGCAAAGATGAGCCTCTGCTGGTCCGGTGG 10057
Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288
| |||||| || ||| || || ||| || | | | |||| | ||| ||
Sbjct 10056 GATACCCTCTTTATCCTGGATCTTAGCCTTGACGTTGTCAATGGTGTCTGAGCTCTCAAC 9997
Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
||||| || || || || || || || ||||| ||||||||||||||
Sbjct 9996 CTCCAAAGTGATGGTTTTACCGGTGAGGGTCTTGACAAAGATTTGCAT 9949
>seq24793
Length=2311
Score = 118 bits (130), Expect = 8e-22
Identities = 150/204 (74%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193
||||| || ||||||||| ||||||||||| || | | |||| || || ||
Sbjct 1411 TGCAGAGTAGACTCCTTCTGGATGTTGTAGTCCGCCAATGTTCTGCCGTCTTCAAGCTGC 1470
Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTT 45253
|| |||||||| ||||||| ||| ||||| ||||| | |||||||||||| | | ||
Sbjct 1471 TTGCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATACCCTCCTTGTCTTGGA-TCTT 1529
Query 45254 TGCTTAACCGCCG-CCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312
||||| || | | | | |||| | ||||||||| | |||||||||||| |||||
Sbjct 1530 TGCTTTGACGTTGTCGATGGTGTCGGAGCTCTCCACCTCTAGGGTAATCGTCTTTCCCGT 1589
Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336
|| ||||| || ||||| |||||
Sbjct 1590 CAAGGTCTTAACGAAGATCTGCAT 1613
Score = 89.7 bits (98), Expect = 4e-13
Identities = 137/193 (71%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204
||||||||| |||||||| || || | |||| || || || |||||||||||
Sbjct 1650 CTCCTTCTGGATGTTGTAATCAGCGAGAGTCCTGCCGTCCTCGAGCTGCTTTCCGGCGAA 1709
Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264
|| | || ||| || || || || | |||||||||||| || | || |||| | ||
Sbjct 1710 GATAAGCCTCTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGAA-TCTTGGCTTTAACGT 1768
Query 45265 CG-CCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCA 45323
| | | | |||| | |||||||| | ||| || ||||| ||||| |||||||| |
Sbjct 1769 TGTCGATGGTGTCTGAGCTTTCCACCTCGAGGGTGATTGTCTTTCCCGTGAGAGTCTTAA 1828
Query 45324 CAAAGATTTGCAT 45336
|||| || |||||
Sbjct 1829 CAAAAATCTGCAT 1841
>seq7912
Length=9007
Score = 118 bits (130), Expect = 8e-22
Identities = 156/214 (73%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTC-GTTCAGTTGGCGATCGTC 45183
|| |||||||| || ||| |||||| || ||||||||||| | | || | |||| | ||
Sbjct 6351 AACACCAAGTGAAGTGTGGACTCCTTTTGGATGTTGTAGTCGGCTAAGGT-GCGACCATC 6409
Query 45184 GTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTC 45243
|| || ||||| || ||||| || | || ||| ||||| ||||| | ||||||||||||
Sbjct 6410 CTCAAGCTGTTTCCCAGCGAAGATGAGCCTCTGCTGGTCCGGAGGGATACCCTCCTTGTC 6469
Query 45244 CGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGT 45303
|| || ||| || | | | |||| | ||| ||||||| ||||| ||
Sbjct 6470 TTGGATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCAACCTCCAAAGTAATGGT 6529
Query 45304 CTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
||| || |||| |||||| |||||||| ||||||
Sbjct 6530 CTTTCCAGTCAAAGTCTTGACAAAGATCTGCATG 6563
Score = 104 bits (114), Expect = 2e-17
Identities = 153/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGT-TCAGTTGGCGATCGTC 45183
|| |||||||| || ||| |||||| || || ||||||||| | || || ||| | ||
Sbjct 6123 AACACCAAGTGAAGTGTGGACTCCTTTTGGATATTGTAGTCGGCTAAGGTG-CGACCATC 6181
Query 45184 GTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTC 45243
|| || || || || ||||| || | ||||| ||||| ||||| | ||| ||||| ||
Sbjct 6182 CTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTATC 6241
Query 45244 CGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGT 45303
| || || ||| || | | | |||| | ||||||||||| || || ||
Sbjct 6242 CTGGATCTTGGCCTTGACATTGTCAATGGTGTCAGAGCTCTCCACCTCCAACGTGATGGT 6301
Query 45304 CTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|||||| || || ||||| |||||||| ||||||
Sbjct 6302 CTTGCCGGTAAGTGTCTTGACAAAGATCTGCATG 6335
>seq1703
Length=21771
Score = 111 bits (122), Expect = 1e-19
Identities = 155/215 (72%), Gaps = 2/215 (1%)
Strand=Plus/Plus
Query 45124 TAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTC 45183
||| |||||||| || || ||| |||||||||||||| || || |||| | ||
Sbjct 18154 TAACACCAAGTGAAGGGTCGACTCTTTCTGAATGTTGTAATCAGCCAAGGTGCGACCATC 18213
Query 45184 GTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTC 45243
|| || || || || |||||||||| || ||| ||||| ||||| | |||||| |||||
Sbjct 18214 CTCGAGCTGCTTCCCAGCGAATATCAGCCTCTGCTGGTCCGGAGGGATACCCTCTTTGTC 18273
Query 45244 CGCAATTTTTTGCTTAACCGCCG-CCACGCTGTCCCCACCCTCCACCTCCACGGTAATCG 45302
| |||| |||| || | | | | |||| || ||||||||| | || ||||
Sbjct 18274 TTGGA-TTTTCGCTTTCACGTTGTCAATGGTGTCGGAACTCTCCACCTCTAAAGTGATCG 18332
Query 45303 TCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|||| || |||| ||||| || ||||| ||||||
Sbjct 18333 TCTTTCCTGTCAACGTCTTAACGAAGATCTGCATG 18367
Score = 104 bits (114), Expect = 2e-17
Identities = 154/216 (71%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184
|| |||||||| ||||| ||||||||| || ||||| ||| || |||| | ||
Sbjct 18839 AAGACCAAGTGAAGCGTAGACTCCTTCTGGATATTGTAATCGGCCAAGGTGCGACCATCC 18898
Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244
|| || || ||||||||||| || | ||||| || || ||||| | || |||||||||
Sbjct 18899 TCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGAGGGATCCCTTCCTTGTCC 18958
Query 45245 GCAATTTTTTGCTTAACCGCCG-CCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGT 45303
| | || |||| || | | | | |||| | |||||||| | ||| || ||
Sbjct 18959 TGGA-TCTTGGCTTTCACGTTGTCGATGGTGTCGGAGCTTTCCACCTCGAGGGTGATTGT 19017
Query 45304 CTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTT 45339
||| || || ||||| ||||| ||||||||||| ||
Sbjct 19018 CTTCCCGGTGAGAGTTTTCACGAAGATTTGCATCTT 19053
>seq7348
Length=9517
Score = 105 bits (116), Expect = 5e-18
Identities = 145/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||||||| || || ||||||||| |||||||||||| || |||| | || ||
Sbjct 205 ACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCAAGAGTGCGACCATCCTCG 146
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || ||||| ||||| || | ||||| ||||| ||||| | ||| |||||||||
Sbjct 145 AGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTGTCCTGG 86
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | |||| | ||| || |||| || || ||||||
Sbjct 85 ATCTTAGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCAACTTCCAATGTGATGGTCTTG 26
Query 45308 CCCGTCAGAGTCTTCACAAAGAT 45330
|| || ||||||||||| |||||
Sbjct 25 CCGGTAAGAGTCTTCACGAAGAT 3
Score = 91.5 bits (100), Expect = 1e-13
Identities = 147/209 (70%), Gaps = 2/209 (1%)
Strand=Plus/Minus
Query 45129 CCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTC-GTTCAGTTGGCGATCGTCGTCC 45187
||||||| || || ||||||||| ||||||||||| | | || | |||| | || ||
Sbjct 432 CCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCTGCTAAGGT-GCGACCATCCTCA 374
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || ||||| ||||| || | ||||| || || ||||| | || |||||||||
Sbjct 373 AGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCCGGAGGGATGCCTTCCTTGTCCTGG 314
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | |||| | ||||||||| | || || |||||
Sbjct 313 ATCTTGGCCTTTACGTTGTCAATGGTGTCAGAGCTCTCCACCTCAAGTGTGATGGTCTTA 254
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| |||| |||||||| || || |||||
Sbjct 253 CCAGTCAAGGTCTTCACGAATATCTGCAT 225
>seq4396
Length=13502
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
||||| | || | ||| |||||||| || || ||| |||||||||||||| || |
Sbjct 12717 CCACCACGCAGACGTAACACCAAGTGAAGGGTTGACTCTTTCTGAATGTTGTAATCAGCC 12658
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
| |||| | || || || || || || ||||| || | ||||| ||||| || ||
Sbjct 12657 AAGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGG 12598
Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289
| |||||||||||| ||| || ||| || | | | |||| | |||||||
Sbjct 12597 ATCCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCCACC 12538
Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|||| || || ||||| || ||||| ||||| ||||| || |||||
Sbjct 12537 TCCAAAGTGATAGTCTTCCCGGTCAGTGTCTTAACAAAAATCTGCAT 12491
Score = 89.7 bits (98), Expect = 4e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184
|| |||||||| || || ||||||||| ||||| ||||| || |||| | ||
Sbjct 313 AACACCAAGTGAAGTGTAGACTCCTTCTGGATGTTATAGTCAGCCAAGGTGCGACCATCC 254
Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244
|| || || || || ||||| || | ||||| ||||| || || | ||||||||||||
Sbjct 253 TCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCC 194
Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304
||| || ||| || | | | |||| | ||| || || | ||| || |||
Sbjct 193 TGAATCTTAGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCAACTTCGAGGGTGATTGTC 134
Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| || || || ||||| |||||||| |||||
Sbjct 133 TTTCCGGTTAGTGTCTTGACAAAGATCTGCAT 102
>seq3667
Length=14967
Score = 104 bits (114), Expect = 2e-17
Identities = 140/195 (72%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204
||||||||| |||||||||||| || ||| |||| || || ||||| ||||||||
Sbjct 5530 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCCTCGAGCTGTTTCCCGGCGAA 5589
Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264
|||| |||||| ||||| ||||| | || ||||||||| || || || ||
Sbjct 5590 GATCAGCCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCTTTGACATT 5649
Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324
| | | |||| | || ||||| | ||| |||||||| ||||| || || |||||
Sbjct 5650 GTCGATGGTGTCGGAAGATTCGACCTCGAGGGTGATCGTCTTCCCCGTTAGGGTTTTCAC 5709
Query 45325 AAAGATTTGCATGTT 45339
||||| ||||| ||
Sbjct 5710 GAAGATCTGCATCTT 5724
>seq1045
Length=26565
Score = 104 bits (114), Expect = 2e-17
Identities = 140/195 (72%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204
||||||||| |||||||||||| || ||| |||| || || ||||| ||||||||
Sbjct 2827 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCCTCGAGCTGTTTCCCGGCGAA 2886
Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264
|||| |||||| ||||| ||||| | || ||||||||| || || ||| ||
Sbjct 2887 GATCAGCCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTT 2946
Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324
| | | |||| ||| ||||| | ||| || ||||| ||||| || || |||||
Sbjct 2947 GTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATTGTCTTCCCCGTTAGGGTTTTCAC 3006
Query 45325 AAAGATTTGCATGTT 45339
||||| ||||| ||
Sbjct 3007 GAAGATCTGCATCTT 3021
>seq37186
Length=985
Score = 102 bits (112), Expect = 6e-17
Identities = 140/193 (73%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204
||| || || ||||||||||| || | | |||| |||| ||||| ||||||||
Sbjct 475 CTCTTTTTGGATGTTGTAGTCAGCCAATGTTCTGCCGTCCTCCAACTGTTTCCCGGCGAA 534
Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264
|| | || ||| || |||||||| | |||||| |||||| || | || |||| | ||
Sbjct 535 GATAAGCCTCTGCTGATCGGGAGGGATACCCTCTTTGTCCTGAA-TCTTGGCTTTAACGT 593
Query 45265 CG-CCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCA 45323
| | | | |||| | |||||||| | ||| |||||||| || || |||||||| |
Sbjct 594 TGTCGATGGTGTCGGAGCTTTCCACCTCGAGGGTGATCGTCTTCCCAGTGAGAGTCTTAA 653
Query 45324 CAAAGATTTGCAT 45336
| |||||||||||
Sbjct 654 CGAAGATTTGCAT 666
Score = 100 bits (110), Expect = 2e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193
||||| || ||||||||| ||||||||||| || | | |||| || || ||
Sbjct 7 TGCAGAGTAGACTCCTTCTGGATGTTGTAGTCCGCCAATGTTCTGCCGTCTTCAAGCTGC 66
Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTT 45253
|| |||||||| ||||||| ||| ||||| ||||| | |||||||||||| || ||
Sbjct 67 TTGCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATACCCTCCTTGTCTTGGATCTTA 126
Query 45254 TGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTC 45313
|| || | | | |||| | ||||||||||| ||||| |||||||| |||
Sbjct 127 GCTTTGACATTGTCAATGGTGTCGGAGCTCTCCACCTCCAAAGTAATGGTCTTGCCGGTC 186
Query 45314 AGAGTCTTCACAAAGATTTGCAT 45336
| ||||| || || || |||||
Sbjct 187 AATGTCTTAACGAAAATCTGCAT 209
>seq12662
Length=5898
Score = 100 bits (110), Expect = 2e-16
Identities = 146/204 (72%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGT 45193
||||| || ||||||||| ||||||||||| || | |||| || || ||
Sbjct 3691 TGCAGAGTAGACTCCTTCTGGATGTTGTAGTCAGCGAGAGTTCTGCCGTCTTCAAGCTGC 3632
Query 45194 TTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTT 45253
|| || ||||| ||||||| ||| ||||| || || | ||||||||||| || |||
Sbjct 3631 TTGCCTGCGAAGATCAACCTCTGCTGGTCCGGTGGGATCCCCTCCTTGTCTTGGATCTTT 3572
Query 45254 TGCTTAACCGCCGCC-ACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312
|||| || | | | | |||| | ||||||||| | |||||||||||| |||||
Sbjct 3571 -GCTTTGACGTTGTCGATGGTGTCGGAGCTCTCCACCTCTAGGGTAATCGTCTTTCCCGT 3513
Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336
|| ||||| || ||||| |||||
Sbjct 3512 CAAGGTCTTAACGAAGATCTGCAT 3489
Score = 89.7 bits (98), Expect = 4e-13
Identities = 137/193 (71%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204
||||||||| |||||||| || || | |||| || || || |||||||||||
Sbjct 3452 CTCCTTCTGGATGTTGTAATCAGCGAGAGTCCTGCCGTCCTCGAGCTGCTTTCCGGCGAA 3393
Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264
|| | || ||| || || || || | |||||||||||| || | || |||| | ||
Sbjct 3392 GATAAGCCTCTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGAA-TCTTGGCTTTAACGT 3334
Query 45265 CG-CCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCA 45323
| | | | |||| | |||||||| | ||| || ||||| ||||| |||||||| |
Sbjct 3333 TGTCGATGGTGTCTGAGCTTTCCACCTCGAGGGTGATTGTCTTTCCCGTGAGAGTCTTAA 3274
Query 45324 CAAAGATTTGCAT 45336
|||| || |||||
Sbjct 3273 CAAAAATCTGCAT 3261
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/213 (69%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184
|| |||||||| | || ||||||||| |||||||||||| || |||| | ||
Sbjct 3928 AACACCAAGTGAATGGTTGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGACCATCC 3869
Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244
|| || || ||||| ||||| || | ||||| ||||| ||||| | || ||||| ||
Sbjct 3868 TCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGGATGCCTTCCTTATCT 3809
Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGC-TGTCCCCACCCTCCACCTCCACGGTAATCGT 45303
| | || |||| || || | ||||| | ||| || || | ||| || ||
Sbjct 3808 TGGA-TCTTGGCTTTCACGTTATCAATCGTGTCCGAGCTCTCAACTTCGAGGGTGATGGT 3750
Query 45304 CTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
||| || |||| |||||||| ||||| |||||
Sbjct 3749 CTTACCAGTCAAGGTCTTCACGAAGATCTGCAT 3717
>seq20570
Length=3172
Score = 93.3 bits (102), Expect = 3e-14
Identities = 150/214 (70%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCA--GTTGGCGATCGT 45182
|| |||||||| || || ||||||||| ||||||||||| || ||| | |||
Sbjct 307 AACACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCCAAGGTT--CTCCCGT 364
Query 45183 CGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGT 45242
| |||| || ||||| ||||| || | || ||| || || ||||| | || |||||||
Sbjct 365 CCTCCAACTGCTTTCCTGCGAAGATAAGCCTCTGCTGATCCGGAGGAATCCCTTCCTTGT 424
Query 45243 CCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCG 45302
|| || || |||||| | | | |||| | |||||||| | ||| || |
Sbjct 425 CCTGGATCTTGGCCTTAACGTTGTCGATGGTGTCAGAGCTTTCCACCTCGAGGGTGATTG 484
Query 45303 TCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|||| || || ||||| ||||| ||||| |||||
Sbjct 485 TCTTTCCTGTGAGAGTTTTCACGAAGATCTGCAT 518
Score = 86.0 bits (94), Expect = 5e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204
||||||||| ||||||||||| || | | || || ||||| || ||||| ||
Sbjct 99 CTCCTTCTGGATGTTGTAGTCAGCAAGAGTCCTTCCATCCTCGAGTTGCTTGCCGGCAAA 158
Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264
||||||| ||| ||||| || || | |||||||| ||| || || ||||||
Sbjct 159 GATCAACCTCTGCTGGTCAGGTGGGATCCCCTCCTTATCCTGGATCTTAGCCTTAACGTT 218
Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324
| | |||| | ||||||||||| || || ||||| || |||| ||||| ||
Sbjct 219 GTCAATAGTGTCGGAGCTCTCCACCTCCAAAGTGATTGTCTTTCCGGTCAATGTCTTGAC 278
Query 45325 AAAGATTTGCAT 45336
|||||| |||||
Sbjct 279 AAAGATCTGCAT 290
>seq11485
Length=6519
Score = 89.7 bits (98), Expect = 4e-13
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204
||||||||| |||||||| ||| ||| ||| |||| || || || || || |||||
Sbjct 4669 CTCCTTCTGGATGTTGTAATCGGCCAGGGTGCGTCCGTCTTCTAGCTGCTTCCCAGCGAA 4610
Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264
|| | || ||| ||||||||||| | || ||||||||| || ||| ||| ||
Sbjct 4609 GATGAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTTGCCTTGACATT 4550
Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324
| | |||| | ||| ||||| | || || |||||||| || || || |||||
Sbjct 4549 GTCTATAGTGTCGGAGCTCTCGACCTCGAGAGTGATGGTCTTGCCGGTGAGTGTTTTCAC 4490
Query 45325 AAAGATTTGCAT 45336
|| ||||||||
Sbjct 4489 GAAAATTTGCAT 4478
>seq23940
Length=2465
Score = 87.8 bits (96), Expect = 1e-12
Identities = 105/142 (74%), Gaps = 2/142 (1%)
Strand=Plus/Plus
Query 45104 TCTTCGC--CACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGT 45161
||||||| | ||||||| | | |||| ||| ||||| ||||||||| |||||||
Sbjct 2293 TCTTCGCTCCTCCTCTCAGACGGAGAACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGT 2352
Query 45162 AGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGT 45221
||||| || ||| |||| || || || ||||||||||| || | ||||| ||||
Sbjct 2353 AGTCGGCGAGGGTGCGTCCGTCCTCGAGCTGCTTTCCGGCGAAAATGAGGCGCTGCTGGT 2412
Query 45222 CGGGAGGCACACCCTCCTTGTC 45243
| ||||| | || ||||||||
Sbjct 2413 CCGGAGGGATGCCTTCCTTGTC 2434
>seq6096
Length=10951
Score = 87.8 bits (96), Expect = 1e-12
Identities = 105/142 (74%), Gaps = 2/142 (1%)
Strand=Plus/Plus
Query 45104 TCTTCGC--CACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGT 45161
||||||| | ||||||| | | |||| ||| ||||| ||||||||| |||||||
Sbjct 10767 TCTTCGCTCCTCCTCTCAGACGGAGAACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGT 10826
Query 45162 AGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGT 45221
||||| || ||| |||| || || || ||||||||||| || | ||||| ||||
Sbjct 10827 AGTCGGCGAGGGTGCGTCCGTCCTCGAGCTGCTTTCCGGCGAAAATGAGGCGCTGCTGGT 10886
Query 45222 CGGGAGGCACACCCTCCTTGTC 45243
| ||||| | || ||||||||
Sbjct 10887 CCGGAGGGATGCCTTCCTTGTC 10908
>seq1346
Length=23970
Score = 82.4 bits (90), Expect = 6e-11
Identities = 99/135 (73%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
||||| || | || || |||||||| || || ||| ||||| |||||||||||
Sbjct 5917 CCACCCCTAAGCCTCAAGACCAAGTGAAGAGTTGACTCTTTCTGGATGTTGTAGTCCGCA 5858
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
|| | | | || || |||||||| || |||||||||| || |||||| || || ||
Sbjct 5857 AGGGTTCTACCATCTTCAAGTTGTTTGCCAGCGAATATCAGCCTCTGTTGATCCGGTGGT 5798
Query 45230 ACACCCTCCTTGTCC 45244
| ||||||||||||
Sbjct 5797 ATTCCCTCCTTGTCC 5783
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 394763516779372
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |