Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raphanus_20raphanistrum_20subsp._20raphanistrum_20[genbank_20GCA_5F0 00769845.1_202014-10-28] 64,732 sequences; 253,833,977 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq549 192 5e-44 seq37186 127 2e-24 seq14782 123 2e-23 seq11485 123 2e-23 seq7912 114 1e-20 seq4396 109 5e-19 seq3667 107 2e-18 seq964 105 6e-18 seq806 104 2e-17 seq1703 98.7 9e-16 seq1045 93.3 4e-14 seq7348 91.5 1e-13 seq20570 87.8 2e-12 seq25552 82.4 7e-11 >seq549 Length=32968 Score = 192 bits (212), Expect = 5e-44 Identities = 509/765 (67%), Gaps = 22/765 (3%) Strand=Plus/Plus Query 57545 CATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTT 57604 |||||| ||||| | || || | || ||| | |||||||| || || ||||| || || Sbjct 19761 CATGTTCCCGATCCACTACCCGCAGATCTGGGAGATGTACAAGAAAGCCGAAGCCTCCTT 19820 Query 57605 TTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTC---CCTCAA 57661 ||||||| ||| ||||| ||||| || | || |||| ||||| |||||| Sbjct 19821 CTGGACCGCCGAGGAAGTCGACCTCTCCCAAGACACCCGCGACTGGGAGCAAAACCTCAA 19880 Query 57662 AGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTAT 57721 || ||| || | || | |||||||| | || || |||||||| ||||| || || Sbjct 19881 CGACGGCGAGCGACACTTCGTCAAACACGTCCTCGCCTTCTTCGCCGCCTCCGACGGGAT 19940 Query 57722 TGTTAACGAGAATTTGGTCGAAAGATTTTCACAA--GAAGTGCAAGTGACGGAGGCGAGA 57779 || ||||||| | | | | ||||| || || || || | ||||| | Sbjct 19941 CGTCCTCGAGAATCTCGCCTCCCG--TTTCATGTCCGACGTCCAGGTCTCCGAGGCCCGC 19998 Query 57780 TGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTC 57839 ||| ||||| || || | || || || ||| | || || || ||||| || ||| Sbjct 19999 GCCTTCTACGGCTTCCAGATCGCGATCGAGAACATCCACTCCGAGATGTACAGTCTCCTC 20058 Query 57840 ATCGATACGTACGTGAAGGACAACGACGAGA---AACGTAGACTGTTCAACGCGATCGAA 57896 | || || ||| | || |||||| | |||| | | | || ||| ||||||||| Sbjct 20059 TTAGACACTTACATCAAAGACAACAAGGAGAGGGACCAT---CTCTTCCGCGCGATCGAG 20115 Query 57897 ACAATGCCC-GCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCAC 57955 || || || ||| | || ||||| | ||| | | || ||||| | | ||| | Sbjct 20116 ACGATCCCTTGCG-TAAAGAAAAAGGCCCAATGGGCCTTGAAGTGGATCGATGG-GCCTC 20173 Query 57956 -GGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGG 58014 |||| |||||||||||| | | |||||||| ||| ||||| || ||||| |||| Sbjct 20174 AGGCC---TTCGCCGAGAGGATCGTGGCGTTCGCTTGCGTGGAAGGGATCTTCTTCTCGG 20230 Query 58015 GCAGCTT-TGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTT 58073 ||||||| ||| | || || ||| ||||||| || || || ||||| || || || || Sbjct 20231 GCAGCTTCTGC-TCGATCTTCTGGCTGAAGAAGCGTGGGCTCATGCCGGGTCTCACCTTC 20289 Query 58074 AGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTAC 58133 ||||||| |||| ||| | ||||| || ||||| || || |||||||| || ||| Sbjct 20290 TCCAACGAGCTGATCTCGAGAGACGAAGGCCTCCACTGCGACTTCGCGTGCCTGATCTAC 20349 Query 58134 TCTCACATTGTCAATAAACCGACGCGGGATCGCATCTTGGACATTATCACCGAGGCGGTC 58193 || | | || | || | || ||| ||| | | || | ||| ||||| Sbjct 20350 TCCCTCCTTAGGACGAAGCTCTCGGAGGAGCGCGTGAGGTCGATCGTGTGCGACGCGGTG 20409 Query 58194 GCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAAT 58253 | |||||| | |||||||| ||| || || ||| || || | || |||||| Sbjct 20410 GAGATCGAGAGGGAGTTTGTGTGCGACGCGCTCCCGTGCGCGTTGGTGGGGATGAACCGG 20469 Query 58254 GATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTG 58298 || |||||| |||| |||||||| || || || || |||||| Sbjct 20470 GAGTTGATGAGTCAGTATATTGAGTTCGTGGCGGATAGGCTTTTG 20514 >seq37186 Length=985 Score = 127 bits (140), Expect = 2e-24 Identities = 169/231 (73%), Gaps = 3/231 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| |||||||| || || || ||||||||| |||| || ||| ||| Sbjct 666 ATGCAAATCTTCGTTAAGACTCTCACTGGGAAGACGATCACCCTCGAGGTGGAAAGCTCC 607 Query 31253 GACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| |||| | || | ||| | |||||| || || | || ||||| || Sbjct 606 GACACCATCGACAACGTTAAAGCCAAGATTCA-GGACAAAGAGGGTATCCCTCCCGATCA 548 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | || || ||||| || ||||||||||| ||| | || || || || || Sbjct 547 GCAGAGGCTTATCTTCGCCGGGAAACAGTTGGAGGACGGCAGAACATTGGCTGACTACAA 488 Query 31372 CATTCAAAAAGAATCGA-CTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||| |||||||| |||| |||||||||| || || || || | || |||| Sbjct 487 CATCCAAAAAGAGTCGACCTCTTCATCTTGTCCTCAGGCTCCGTGGTGGTA 437 >seq14782 Length=4961 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 ||| ||||| || ||||| || || || || || || ||||| ||| | || || ||| | Sbjct 2199 AAAAATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATAACCCTAGAGGTCGAATC 2140 Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 ||||||| |||| | ||||| | || |||||||||||| | || || || Sbjct 2139 ATCCGACACGATCGACAATGTCAAGGCCAAGATTCAGGACAAGGAAGGGATCCCACCGGA 2080 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368 |||||||||||| || ||||| || || ||| |||||||| | ||| | ||||| Sbjct 2079 CCAGCAGCGTCTGATCTTCGCCGGGAAGCAGCTGGAAGACGGAAGGACCCTCGCGGATTA 2020 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||||| || || || ||||||||||| ||||| || | ||||| || || Sbjct 2019 CAACATCCAGAAGGAGTCGACTCTTCACCTGGTTCTCCGTCTGAGAGGAGG 1969 >seq11485 Length=6519 Score = 123 bits (136), Expect = 2e-23 Identities = 167/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| || || || || ||||| || ||||| |||| || || ||| Sbjct 4478 ATGCAAATTTTCGTGAAAACACTCACCGGCAAGACCATCACTCTCGAGGTCGAGAGCTCC 4537 Query 31253 GACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | | || | ||||| || || || ||||||||||||| | || |||||||| Sbjct 4538 GACACTATAGACAATGTCAAGGCAAAG-ATCCAGGACAAGGAAGGCATCCCTCCCGACCA 4596 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | || || |||||||| || ||| | |||||| || || |||||| || Sbjct 4597 GCAGAGGCTCATCTTCGCTGGGAAGCAGCTAGAAGACGGACGCACCCTGGCCGATTACAA 4656 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||| || || || || ||||| ||||| |||||| | || | || |||| Sbjct 4657 CATCCAGAAGGAGTCAACTCTCCATCTCGTACTTCGTCTCCGTGGTGGTA 4706 Score = 109 bits (120), Expect = 5e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| ||||| || || || ||||| || ||| | || || || || Sbjct 4934 ATGCAGATTTTCGTCAAGACACTCACCGGTAAAACCATTACCCTTGAAGTGGAGAGCTCT 4993 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || ||| || || ||||||||||||| | || || |||||| Sbjct 4994 GACACGATCGACAATGTGAAAGCGAAGATTCAGGACAAGGAAGGCATCCCTCCGGACCAG 5053 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || |||||||| |||||| | || || | |||| || ||||| ||| Sbjct 5054 CAGAGACTCATCTTCGCTGGGAAACAGCTCGAGGATGGTCGGACTTTGGCTGATTACAAC 5113 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 || || || || || |||||||| |||| ||| Sbjct 5114 ATCCAGAAGGAGTCTACTCTTCACTTGGTTCTT 5146 Score = 102 bits (112), Expect = 7e-17 Identities = 154/214 (72%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| ||||| || |||||| |||||||||| || ||||| | || ||||| ||| Sbjct 4706 ATGCAGATTTTTGTCAAGACTTTGACAGGCAAGACCATCACTTTGGAGGTTGAGAGCTCC 4765 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | | || | || ||| || ||| | |||||||||||| | || || ||||| Sbjct 4766 GACACTATTGACAATGTGAAAGCAAAGA-TCCAGGACAAGGAAGGAATTCCTCCGGACCA 4824 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATA 31370 |||| | || || |||||||| |||||| | || || | | | || | ||||| | Sbjct 4825 GCAGAGACTCATCTTCGCTGGTAAACAGCTTGAGGA-TGGACGCACGCTTGCGGATTACA 4883 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 | ||||| || || || || |||||||| || || Sbjct 4884 ATATTCAGAAGGAGTCTACGCTTCATCTCGTCCT 4917 >seq7912 Length=9007 Score = 114 bits (126), Expect = 1e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| |||||||| || || || || |||||| |||| || ||| ||| Sbjct 6790 ATGCAGATCTTCGTTAAGACTCTCACGGGAAAGACCATCACCCTCGAGGTGGAAAGCTCC 6731 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | |||||| | || |||||||||||| | || ||||| ||| Sbjct 6730 GACACAATCGACAACGTCAAAGCCAAGATTCAGGACAAGGAAGGTATCCCTCCCGATCAG 6671 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || ||||| ||||| ||| | |||||| | || || || || ||| Sbjct 6670 CAGAGGCTCATCTTCGCCGGCAAGCAGCTCGAAGACGGCAGAACATTGGCAGACTACAAC 6611 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410 || ||||| || || || |||||||| || || || || Sbjct 6610 ATCCAAAAGGAGTCTACGCTTCATCTCGTTCTCAGGCT 6573 >seq4396 Length=13502 Score = 109 bits (120), Expect = 5e-19 Identities = 166/234 (71%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 ||| ||||| || ||||| |||||||| || || || ||||||||| |||| || ||| Sbjct 11827 AAAGATGCAGATATTCGTTAAGACTCTCACCGGAAAGACGATCACCCTCGAGGTGGAAAG 11886 Query 31249 GTCCGACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307 || |||| |||| |||| | || | ||| | ||||||||||||| | || || | Sbjct 11887 CTCAGACACCATCGACAACGTTAAAGCCAAGATTCA-GGACAAGGAAGGCATTCCCCCGG 11945 Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATT 31367 | |||||| | || || ||||| || || || | ||||| ||| | || | Sbjct 11946 ATCAGCAGAGGCTTATCTTCGCCGGGAAGCAACTTGAAGATGGGCGTACTCTCGCTGACT 12005 Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 | ||||| |||||||| ||||| |||||||| || || || || | || |||| Sbjct 12006 ACAACATCCAAAAAGAGTCGACCCTTCATCTTGTCCTCAGGCTCCGTGGTGGTA 12059 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| ||||| || ||||| ||||| || || || ||||| | || || || ||| Sbjct 12491 ATGCAGATTTTTGTTAAGACACTGACCGGGAAGACTATCACTTTGGAGGTGGAGAGCTCC 12550 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | ||||| | || ||||||||| || | || || |||||| Sbjct 12551 GACACCATTGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGGATCCCACCGGACCAG 12610 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || ||||||||||| ||| | || || | || || ||||| ||| Sbjct 12611 CAGCGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGTCGCACCTTGGCTGATTACAAC 12670 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGT 31401 ||||| ||||| || || ||||| |||| Sbjct 12671 ATTCAGAAAGAGTCAACCCTTCACTTGGT 12699 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| || || || || || |||||| |||| ||||| ||| Sbjct 102 ATGCAGATCTTTGTCAAGACACTAACCGGAAAGACAATCACCCTCGAAGTTGAGAGCTCC 161 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | ||||| | || ||||||||| || | || || |||||| Sbjct 162 GACACCATTGACAACGTCAAGGCTAAGATTCAGGACAAGGAGGGAATCCCACCGGACCAG 221 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || ||||||||||| ||| | || || | || || || |||||| Sbjct 222 CAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAGGATGGTCGCACCTTGGCTGACTATAAC 281 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGT 31401 || || || || || || ||||| |||| Sbjct 282 ATCCAGAAGGAGTCTACACTTCACTTGGT 310 >seq3667 Length=14967 Score = 107 bits (118), Expect = 2e-18 Identities = 154/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 31188 CAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAAC 31247 |||| ||||| || ||||| || || || || || || ||||||||| |||| || ||| Sbjct 5726 CAAAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATCACCCTCGAGGTCGAAT 5667 Query 31248 CGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307 | ||||||| |||| | |||||| | || ||||||||||||| | || || | Sbjct 5666 CTTCCGACACCATCGACAATGTCAAAGCCAAGATCCAGGACAAGGAAGGCATCCCTCCGG 5607 Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATT 31367 |||||||||| || || ||||| || |||||| | || ||| || | ||| | Sbjct 5606 ACCAGCAGCGGCTGATCTTCGCCGGGAAACAGCTCGAGGACGGGCGCACCCTCGCCGACT 5547 Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 | ||||| || || || || ||||| || || || || Sbjct 5546 ACAACATCCAGAAGGAGTCTACTCTCCACCTCGTCCT 5510 >seq964 Length=27231 Score = 105 bits (116), Expect = 6e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| || ||||| || ||||| || ||||| |||| || || ||| Sbjct 9493 ATGCAAATTTTCGTGAAAACTCTCACCGGCAAGACCATCACTCTCGAAGTCGAGAGCTCC 9552 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | |||| | ||||| | || |||||||||||| | || || |||||| Sbjct 9553 GATACCATCGATAACGTCAAGGCTAAGATCCAGGACAAGGAAGGTATTCCTCCGGACCAG 9612 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 ||| | || || ||||| || |||||| | || || | | | || || |||||| || Sbjct 9613 CAGAGGCTCATCTTCGCCGGTAAACAGCTCGAGGA-TGGACGTACCTTGGCCGATTACAA 9671 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || || || |||||||| ||||| || || || |||| || |||| Sbjct 9672 TATCCAGAAGGAGTCGACTCTCCATCTCGTTCTCAGGTTGAGAGGTGGTA 9721 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| ||||| || ||||| || || |||||||| ||||| | || || || || Sbjct 10176 CATGCAGATTTTTGTGAAGACCCTCACTGGCAAAACCATCACTTTGGAGGTGGAGAGCTC 10235 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | ||||| | || |||||||||||| | || || ||||| Sbjct 10236 TGACACGATCGATAACGTCAAGGCTAAGATTCAGGACAAGGAAGGGATCCCACCGGACCA 10295 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | || || |||||||| |||||| | || || | || | ||||| || Sbjct 10296 GCAGAGACTCATCTTCGCTGGGAAACAGCTTGAGGATGGTCGTACGCTTGCAGATTACAA 10355 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGT 31401 || || || || ||||| ||||| || || Sbjct 10356 TATCCAGAAGGAGTCGACCCTTCACCTTGT 10385 Score = 82.4 bits (90), Expect = 7e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || ||||||||||||||||| || || ||| | || ||||| || Sbjct 10405 ATGCAAATCTTTGTGAAGACTCTGACAGGCAAGACTATTACCTTGGAAGTTGAGAGCTCA 10464 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || | ||| |||||||||||| | || || ||||| Sbjct 10465 GACACAATCGACAATGTGAAGGCTAAAATTCAGGACAAGGAAGGGATCCCTCCGGACCAA 10524 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || |||||||| || ||| | || || | || | || || || Sbjct 10525 CAGAGACTCATCTTCGCTGGTAAGCAGCTTGAGGATGGTCGCACGCTTGCTGACTACAAT 10584 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 || || || || ||||| ||||| |||| ||| Sbjct 10585 ATCCAGAAGGAGTCGACGCTTCACTTGGTTCTT 10617 >seq806 Length=29032 Score = 104 bits (114), Expect = 2e-17 Identities = 153/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 31188 CAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAAC 31247 |||| ||||| || ||||| || || || || || || ||||| ||| |||| || || Sbjct 18181 CAAAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATAACCCTCGAGGTCGAGT 18122 Query 31248 CGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307 | ||||||| |||| | ||||| | || |||||||||||| | ||||| | Sbjct 18121 CCTCCGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGGATCCCGCCGG 18062 Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATT 31367 |||||||||| || || ||||| || || ||| | |||||| || | ||| | Sbjct 18061 ACCAGCAGCGACTGATCTTCGCCGGGAAGCAGCTCGAAGACGGCCGCACACTCGCCGACT 18002 Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 | ||||| || || || ||||| |||||||| || || Sbjct 18001 ACAACATCCAGAAGGAGTCGACGCTTCATCTCGTCCT 17965 >seq1703 Length=21771 Score = 98.7 bits (108), Expect = 9e-16 Identities = 150/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 31188 CAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAAC 31247 |||| |||||||| ||||| || ||||| || || || || |||||| |||| || ||| Sbjct 19055 CAAAGATGCAAATCTTCGTGAAAACTCTCACCGGGAAGACAATCACCCTCGAGGTGGAAA 18996 Query 31248 CGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307 ||||||| |||| | || ||| | || |||||||||||| | || || | Sbjct 18995 GCTCCGACACCATCGACAACGTGAAAGCCAAGATCCAGGACAAGGAAGGGATCCCTCCGG 18936 Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATT 31367 | ||||||||||| || ||||| || || ||| | || || | || || ||||| Sbjct 18935 ATCAGCAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAGGATGGTCGCACCTTGGCCGATT 18876 Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGT 31401 | || || || || || || || ||||| |||| Sbjct 18875 ACAATATCCAGAAGGAGTCTACGCTTCACTTGGT 18842 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| ||||||| || |||||||| | || || || || Sbjct 18367 CATGCAGATCTTCGTTAAGACGTTGACAGGAAAGACGATCACTTTAGAGGTGGAGAGTTC 18308 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | || | || ||| || ||| ||||| || || | || || ||||| Sbjct 18307 CGACACCATTGACAACGTGAAAGCGAAAATCCAAGACAAAGAGGGTATCCCTCCGGACCA 18248 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | || ||||||||||| || ||| | || || | || || ||||| || Sbjct 18247 GCAGAGGCTGATATTCGCTGGGAAGCAGCTCGAGGATGGTCGCACCTTGGCTGATTACAA 18188 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGT 31401 |||||| ||||| ||||| ||||| |||| Sbjct 18187 CATTCAGAAAGAGTCGACCCTTCACTTGGT 18158 >seq1045 Length=26565 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 ||| ||||| || ||||| || || || || || || || |||||| |||| || || | Sbjct 3022 AAAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACAATCACCCTCGAGGTCGAGTC 2963 Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 ||||||| |||| | ||||| | || ||||||||||||| | || || || Sbjct 2962 CTCCGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATCCCTCCGGA 2903 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368 ||||||||| || || ||||| || |||||| | || ||| || | ||| || Sbjct 2902 CCAGCAGCGGCTGATCTTCGCCGGGAAACAGCTCGAGGACGGGCGCACCCTCGCCGACTA 2843 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || || || ||||| || || || || Sbjct 2842 CAACATCCAGAAGGAGTCTACTCTCCACCTCGTCCT 2807 >seq7348 Length=9517 Score = 91.5 bits (100), Expect = 1e-13 Identities = 154/223 (69%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 31199 ATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGT 31258 || ||||| |||||||| || ||||| || ||||| | || ||||| ||||||| Sbjct 3 ATCTTCGTGAAGACTCTTACCGGCAAGACCATCACATTGGAAGTTGAGAGCTCCGACACC 62 Query 31259 GTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGT 31318 | || | || || | || |||||||||||| | || || |||||||||||| Sbjct 63 ATTGACAACGTGAAGGCTAAGATCCAGGACAAGGAAGGTATCCCTCCGGACCAGCAGCGT 122 Query 31319 CTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAA 31378 || || |||||||| || ||| | || || | ||| | ||| || ||||| || Sbjct 123 CTCATCTTCGCTGGAAAGCAGCTCGAGGATGGTCGCACTCTTGCCGACTACAACATCCAG 182 Query 31379 AAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || ||||| ||||| |||| || || || | || |||| Sbjct 183 AAGGAGTCGACCCTTCACTTGGTGCTCAGGCTTCGTGGTGGTA 225 >seq20570 Length=3172 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| || ||||| ||||| || || |||||| |||| || ||| || Sbjct 518 ATGCAGATCTTCGTGAAAACTCTCACAGGAAAGACAATCACCCTCGAGGTGGAAAGCTCT 459 Query 31253 GACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| |||| | | | ||| | |||||||||||| | || || || || Sbjct 458 GACACCATCGACAACGTTAAGGCCAAGA-TCCAGGACAAGGAAGGGATTCCTCCGGATCA 400 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | || || ||||| || || |||||||| ||| | || || || || || Sbjct 399 GCAGAGGCTTATCTTCGCAGGAAAGCAGTTGGAGGACGGGAGAACCTTGGCTGACTACAA 340 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGT 31401 ||| || || || || || ||||| |||| Sbjct 339 CATCCAGAAGGAGTCTACCCTTCACTTGGT 310 >seq25552 Length=2169 Score = 82.4 bits (90), Expect = 7e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| || || || || ||||| || ||||| |||| || || | ||| Sbjct 245 ATGCAGATCTTCGTGAAAACCCTAACGGGCAAGACCATCACTCTCGAAGTCGAGTCCTCC 304 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | |||||| | || ||||| ||||| | || || || ||| Sbjct 305 GACACCATCGACAATGTCAAAGCCAAGATCCAAGACAAAGAAGGTATCCCTCCGGATCAG 364 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 |||||||| || ||||| || |||||| | ||||| Sbjct 365 CAGCGTCTGATCTTCGCCGGTAAACAGCTCGAAGA 399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445405708117440