Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raphanus_20raphanistrum_20subsp._20raphanistrum_20[genbank_20GCA_5F0 00769845.1_202014-10-28] 64,732 sequences; 253,833,977 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq1703 143 6e-29 seq4396 140 7e-28 seq12662 136 9e-27 seq11485 136 9e-27 seq37186 134 3e-26 seq24793 134 3e-26 seq7912 132 1e-25 seq964 131 4e-25 seq14782 123 6e-23 seq7348 120 7e-22 seq4867 116 9e-21 seq3737 113 1e-19 seq10768 107 4e-18 seq1346 104 5e-17 seq13765 95.1 3e-14 seq14792 91.5 3e-13 seq2812 84.2 5e-11 >seq1703 Length=21771 Score = 143 bits (158), Expect = 6e-29 Identities = 152/198 (77%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 |||||||||||||| || || ||||||| ||||| || || || || | || || || Sbjct 18398 GTAGATTCTTTCTGGATGTTGTAGTCAGCAAGAGTCCTCCCATCCTCCAACTGCTTCCCG 18457 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || | |||||| || ||||| || || ||||| |||||||||||||| || || Sbjct 18458 GCAAAGATCAACCTCTGCTGGTCAGGTGGGATCCCTTCCTTATCCTGAATCTTAGCCTTG 18517 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | |||||| || | || ||||| | ||||||||||| ||||| | || Sbjct 18518 ACATTGTCAATAGTATCG-GAGCTCTCCACCTCCAAAGTAATAGTCTTTCCAGTCAAAGT 18576 Query 104542 TTTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 18577 CTTGACAAAGATCTGCAT 18594 Score = 104 bits (114), Expect = 5e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || ||||||||||| || || |||| | || | ||| || || || || || ||| Sbjct 18170 GTCGACTCTTTCTGAATGTTGTAATCAGCCAAGGTGCGACCATCCTCGAGCTGCTTCCCA 18229 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || |||||||| || || ||||| || || ||||| || || || || ||||| Sbjct 18230 GCGAATATCAGCCTCTGCTGGTCCGGAGGGATACCCTCTTTGTCTTGGATTTTCGCTTTC 18289 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | ||| ||| | || ||||||| || || ||||| || || | || Sbjct 18290 ACGTTGTCAATGGTGTCGGAACTCTCCACCTCTAAAGTGATCGTCTTTCCTGTCAACGTC 18349 Query 104543 TTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 18350 TTAACGAAGATCTGCAT 18366 >seq4396 Length=13502 Score = 140 bits (154), Expect = 7e-28 Identities = 166/224 (74%), Gaps = 6/224 (3%) Strand=Plus/Minus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 ||||| || || ||||| | || || ||||| || || || ||||||| ||||| | Sbjct 12048 AGCCTGAGGACAAGATGAAGGGTCGACTCTTTTTGGATGTTGTAGTCAGCGAGAGTACGC 11989 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 || ||||| ||||| || || || || || |||||||| ||||| || || || ||||| Sbjct 11988 CCATCTTCAAGTTGCTTCCCGGCGAAGATAAGCCTCTGCTGATCCGGGGGAATGCCTTCC 11929 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGT 104518 || ||||||||||| ||||| || || || | ||| || ||| ||| ||||| || Sbjct 11928 TTGTCCTGAATCTTGGCTTTAACGTTGTCGATGGTGTCTGAGCT---TTCCACCTCGAGG 11872 Query 104519 GTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 || || ||||| || || || || || || ||||||||||| || Sbjct 11871 GTGATCGTCTTTCCGGTGAGAGTCTTAACGAATATCTGCATCTT 11828 Score = 132 bits (146), Expect = 1e-25 Identities = 151/200 (76%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 104362 TGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCC 104421 |||||| || ||||| ||||| ||||||| ||||| || ||||| || || || ||||| Sbjct 527 TGTAGACTCCTTCTGGATATTGTAGTCAGCGAGAGTCCTGCCGTCCTCGAGCTGCTTTCC 468 Query 104422 AGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTT 104481 ||| || || || | ||| || || ||||| || ||||| ||||| || ||||| ||||| Sbjct 467 AGCGAAGATGAGACGCTGCTGGTCTGGAGGGATCCCTTCCTTATCTTGGATCTTGGCTTT 408 Query 104482 TACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTG 104540 || || || | || || | || | || ||||| ||||| || ||||||||||| | | Sbjct 407 CACGTTATCAATCGTGTC-CGAGCTCTCCACCTCCAGTGTGATGGTCTTACCAGTCAAGG 349 Query 104541 TTTTTACAAATATCTGCATT 104560 | || || || || |||||| Sbjct 348 TCTTGACGAAGATTTGCATT 329 Score = 114 bits (126), Expect = 3e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 ||||| | || |||| | || || |||||||| |||| ||||||| |||||| | Sbjct 12480 AGCCTGACAACGAGATAAAGAGTTGACTCTTTCTGGATATCGTAGTCAGCGAGAGTTGTC 12421 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 || || | || || ||||| ||||| || || | ||| ||||||||||| | || || Sbjct 12420 CCATCCTGGAGCTGCTTTCCGGCAAAGATGAGACGCTGCTGATCAGGAGGAACACCCTCC 12361 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521 || ||||| ||||| ||||| || || || |||||||| | || ||||| | ||| Sbjct 12360 TTGTCCTGGATCTTAGCTTTAACTTTGTCAACGGTATCAGAACTCTCCACCTCCAACGTA 12301 Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| ||| | || | ||||| |||||||| Sbjct 12300 ATGGTCTTGCCACTGAGCATCCGCACAAAGATCTGCAT 12263 Score = 113 bits (124), Expect = 1e-19 Identities = 146/199 (73%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 104362 TGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCC 104421 |||||| || ||||| || |||||||||| | || | ||| || || || || || || Sbjct 299 TGTAGACTCCTTCTGGATGTTATAGTCAGCCAAGGTGCGACCATCCTCGAGCTGCTTGCC 240 Query 104422 AGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTT 104481 ||| || || || | ||| || || || || ||||| || || ||||||||||| || || Sbjct 239 AGCGAAGATGAGACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGAATCTTAGCCTT 180 Query 104482 TACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTG 104540 || || || | ||| ||| || | || || || || || || ||||| || || |||| Sbjct 179 GACGTTGTCAATGGTGTCG-GAGCTCTCAACTTCGAGGGTGATTGTCTTTCCGGTTAGTG 121 Query 104541 TTTTTACAAATATCTGCAT 104559 | || ||||| |||||||| Sbjct 120 TCTTGACAAAGATCTGCAT 102 Score = 107 bits (118), Expect = 4e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || ||||||||||| || || |||| | || | ||| || || || || || ||| Sbjct 12687 GTTGACTCTTTCTGAATGTTGTAATCAGCCAAGGTGCGACCATCCTCAAGCTGCTTGCCA 12628 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || | ||| || || || || || || || || ||||||||||| || || Sbjct 12627 GCGAAGATGAGACGCTGCTGGTCCGGTGGGATCCCCTCCTTGTCCTGAATCTTGGCCTTG 12568 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 || || || | ||| ||| || | || ||||| | || |||||||| || || ||||| Sbjct 12567 ACGTTGTCAATGGTGTCG-GAGCTCTCCACCTCCAAAGTGATAGTCTTCCCGGTCAGTGT 12509 Query 104542 TTTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 12508 CTTAACAAAAATCTGCAT 12491 >seq12662 Length=5898 Score = 136 bits (150), Expect = 9e-27 Identities = 163/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 ||||| || || ||||| | ||||| || ||||| || || ||||||| |||||||| Sbjct 3706 AGCCTGAGAACGAGATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCAGCGAGAGTTCTG 3647 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 |||||||| || || || || || || || | |||||| || || || || || || || Sbjct 3646 CCGTCTTCAAGCTGCTTGCCTGCGAAGATCAACCTCTGCTGGTCCGGTGGGATCCCCTCC 3587 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGT 104520 || || || ||||||||||| || || || | ||| ||| || | || |||||||| || Sbjct 3586 TTGTCTTGGATCTTTGCTTTGACGTTGTCGATGGTGTCG-GAGCTCTCCACCTCTAGGGT 3528 Query 104521 AATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| ||||| || || | || || || || |||||||| Sbjct 3527 AATCGTCTTTCCCGTCAAGGTCTTAACGAAGATCTGCAT 3489 Score = 134 bits (148), Expect = 3e-26 Identities = 163/221 (74%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 ||||| || || ||||| | || || || ||||| || || || |||| ||||| || Sbjct 3478 AGCCTGAGAACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAATCAGCGAGAGTCCTG 3419 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 ||||| || || || ||||| || || || |||||||| ||||| || || || || || Sbjct 3418 CCGTCCTCGAGCTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGGGGAATGCCCTCC 3359 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGT 104518 || ||||||||||| ||||| || || || | ||| || ||| ||| ||||| || Sbjct 3358 TTGTCCTGAATCTTGGCTTTAACGTTGTCGATGGTGTCTGAGCT---TTCCACCTCGAGG 3302 Query 104519 GTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || ||||| || || || || || ||||| |||||||| Sbjct 3301 GTGATTGTCTTTCCCGTGAGAGTCTTAACAAAAATCTGCAT 3261 Score = 102 bits (112), Expect = 2e-16 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || ||||| | || || | ||| || || || || |||||| Sbjct 3913 GTTGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGACCATCCTCAAGCTGCTTTCCA 3854 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || | ||| || || ||||| || ||||| ||||| || ||||| ||||| Sbjct 3853 GCGAAGATGAGACGCTGCTGGTCTGGAGGGATGCCTTCCTTATCTTGGATCTTGGCTTTC 3794 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 || || || | || || | || | || || || || || || ||||||||||| | || Sbjct 3793 ACGTTATCAATCGTGTC-CGAGCTCTCAACTTCGAGGGTGATGGTCTTACCAGTCAAGGT 3735 Query 104542 TTTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 3734 CTTCACGAAGATCTGCAT 3717 >seq11485 Length=6519 Score = 136 bits (150), Expect = 9e-27 Identities = 160/214 (75%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 |||||| ||||| | || || || ||||| || || || || | || || | ||||| Sbjct 4690 AAGTACGAGATGGAGAGTTGACTCCTTCTGGATGTTGTAATCGGCCAGGGTGCGTCCGTC 4631 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 |||||| || || ||||| || || |||||||| || || ||||| || ||||| || || Sbjct 4630 TTCTAGCTGCTTCCCAGCGAAGATGAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTGTC 4571 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAG 104525 ||| |||||||| || ||||| |||| || ||| || | || ||||| || || || | Sbjct 4570 CTGGATCTTTGCCTTGACATTGTCTATAGTGTCG-GAGCTCTCGACCTCGAGAGTGATGG 4512 Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 |||| || || |||||||| || || || ||||| Sbjct 4511 TCTTGCCGGTGAGTGTTTTCACGAAAATTTGCAT 4478 Score = 125 bits (138), Expect = 2e-23 Identities = 157/213 (74%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | ||||| || ||||||||||| || || | || || | || || Sbjct 4917 AGGACGAGATGAAGCGTAGACTCCTTCTGAATATTGTAATCCGCAAGCGTGCGTCCATCC 4858 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || || ||||| ||||| || || || ||||| || || ||||| |||||||| || ||| Sbjct 4857 TCAAGCTGTTTACCAGCGAAGATGAGTCTCTGCTGGTCCGGAGGAATTCCTTCCTTGTCC 4798 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGT 104526 || ||||||||||| ||||| || | || ||| || | || ||||| | || || || Sbjct 4797 TGGATCTTTGCTTTCACATTGTCAATAGTGTCG-GAGCTCTCAACCTCCAAAGTGATGGT 4739 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| || || | || || ||||| |||||||| Sbjct 4738 CTTGCCTGTCAAAGTCTTGACAAAAATCTGCAT 4706 Score = 120 bits (132), Expect = 7e-22 Identities = 147/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 ||||| || ||||| || || || |||| | ||| | ||| || || || ||||| ||| Sbjct 5130 GTAGACTCCTTCTGGATGTTGTAATCAGCCAAAGTCCGACCATCCTCGAGCTGTTTCCCA 5071 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || ||||| || || ||||| || ||||| || ||||||||||| ||||| Sbjct 5070 GCGAAGATGAGTCTCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGAATCTTCGCTTTC 5011 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | || || || | || || || || ||||| || ||||| || ||||| Sbjct 5010 ACATTGTCGATCGTGTC-AGAGCTCTCCACTTCAAGGGTAATGGTTTTACCGGTGAGTGT 4952 Query 104542 TTTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 4951 CTTGACGAAAATCTGCAT 4934 >seq37186 Length=985 Score = 134 bits (148), Expect = 3e-26 Identities = 162/219 (74%), Gaps = 1/219 (0%) Strand=Plus/Plus Query 104342 AGCCTAAGTACTAGATGTA-ATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCT 104400 ||||| || || ||||| | | || || ||||| || || || ||||||| | ||||| Sbjct 448 AGCCTGAGGACAAGATGAAGAGGTCGACTCTTTTTGGATGTTGTAGTCAGCCAATGTTCT 507 Query 104401 ACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTC 104460 ||||| || | ||||| || || || || |||||||| ||||| ||||| || || || Sbjct 508 GCCGTCCTCCAACTGTTTCCCGGCGAAGATAAGCCTCTGCTGATCGGGAGGGATACCCTC 567 Query 104461 TTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGT 104520 ||| ||||||||||| ||||| || || || | ||| ||| ||| ||||| || || Sbjct 568 TTTGTCCTGAATCTTGGCTTTAACGTTGTCGATGGTGTCGGAGCTTTCCACCTCGAGGGT 627 Query 104521 AATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| ||||| || || || || || || ||||| Sbjct 628 GATCGTCTTCCCAGTGAGAGTCTTAACGAAGATTTGCAT 666 Score = 131 bits (144), Expect = 4e-25 Identities = 162/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 ||||| || || ||||| || || || || || || || || ||||||| ||||| || Sbjct 220 AGCCTGAGAACGAGATGCAAAGTTGACTCCTTTTGGATGTTGTAGTCAGCGAGAGTCCTG 279 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 ||| | || || || || || ||||| || | |||||| || || || || ||||| || Sbjct 280 CCGACCTCGAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGGATTCCCTCC 339 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGT 104520 || ||||||||||| || || ||||| || | ||| || | || | || ||||| || || Sbjct 340 TTGTCCTGAATCTTAGCCTTGACATTATCGATGGTGTC-CGAGCTCTCCACCTCGAGAGT 398 Query 104521 AATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| || ||||| || || || || |||||||| Sbjct 399 GATGGTCTTTCCGGTAAGGGTCTTGACGAAGATCTGCAT 437 >seq24793 Length=2311 Score = 134 bits (148), Expect = 3e-26 Identities = 163/221 (74%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 ||||| || || ||||| | || || || ||||| || || || |||| ||||| || Sbjct 1624 AGCCTGAGAACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAATCAGCGAGAGTCCTG 1683 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 ||||| || || || ||||| || || || |||||||| ||||| || || || || || Sbjct 1684 CCGTCCTCGAGCTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGGGGAATGCCCTCC 1743 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGT 104518 || ||||||||||| ||||| || || || | ||| || ||| ||| ||||| || Sbjct 1744 TTGTCCTGAATCTTGGCTTTAACGTTGTCGATGGTGTCTGAGCT---TTCCACCTCGAGG 1800 Query 104519 GTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || ||||| || || || || || ||||| |||||||| Sbjct 1801 GTGATTGTCTTTCCCGTGAGAGTCTTAACAAAAATCTGCAT 1841 Score = 127 bits (140), Expect = 5e-24 Identities = 149/199 (75%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 104362 TGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCC 104421 |||||| || ||||| ||||| ||||||| ||||| | ||| || || || || ||||| Sbjct 1188 TGTAGACTCCTTCTGGATATTGTAGTCAGCGAGAGTCCGACCATCCTCGAGCTGCTTTCC 1247 Query 104422 AGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTT 104481 ||| || || || | ||| || || ||||| || ||||| ||||| || ||||| ||||| Sbjct 1248 AGCGAAGATGAGACGCTGCTGGTCTGGAGGGATCCCTTCCTTATCTTGGATCTTGGCTTT 1307 Query 104482 TACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTG 104540 || || || | || || | || | || || || || || || ||||||||||| | | Sbjct 1308 CACGTTATCAATCGTGTC-CGAGCTCTCAACTTCGAGGGTGATGGTCTTACCAGTCAAGG 1366 Query 104541 TTTTTACAAATATCTGCAT 104559 | || ||||| |||||||| Sbjct 1367 TCTTCACAAAGATCTGCAT 1385 Score = 127 bits (140), Expect = 5e-24 Identities = 161/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 ||||| || || ||||| | ||||| || ||||| || || ||||| | | ||||| Sbjct 1396 AGCCTGAGAACGAGATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCCGCCAATGTTCTG 1455 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 |||||||| || || || || || || || | |||||| || || ||||| || || || Sbjct 1456 CCGTCTTCAAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATACCCTCC 1515 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGT 104520 || || || ||||||||||| || || || | ||| ||| || | || |||||||| || Sbjct 1516 TTGTCTTGGATCTTTGCTTTGACGTTGTCGATGGTGTCG-GAGCTCTCCACCTCTAGGGT 1574 Query 104521 AATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| ||||| || || | || || || || |||||||| Sbjct 1575 AATCGTCTTTCCCGTCAAGGTCTTAACGAAGATCTGCAT 1613 >seq7912 Length=9007 Score = 132 bits (146), Expect = 1e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 ||||| || || ||||| | ||||| || || || || || ||||| | | ||||| Sbjct 6573 AGCCTGAGAACGAGATGAAGCGTAGACTCCTTTTGGATGTTGTAGTCTGCCAATGTTCTG 6632 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 |||||||| || || || || || || || |||||||| ||||| ||||| || ||||| Sbjct 6633 CCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGATCGGGAGGGATACCTTCC 6692 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521 || ||||||||||| ||||| || || || | || ||| ||| ||||| || || Sbjct 6693 TTGTCCTGAATCTTGGCTTTGACGTTGTCGATTGTGTCGGAGCTTTCCACCTCGAGGGTG 6752 Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| || || || || || || || |||||||| Sbjct 6753 ATGGTCTTTCCCGTGAGAGTCTTAACGAAGATCTGCAT 6790 >seq964 Length=27231 Score = 131 bits (144), Expect = 4e-25 Identities = 169/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| || | ||| || ||||| | ||||| ||||||||||| || |||||| Sbjct 10178 ATGCCACCTCTGAGTCGAAGCACAAGATGCAGCGTAGACTCTTTCTGAATGTTGTAGTCA 10119 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | ||| || | || || || || || || || ||||| || |||||||| || || || Sbjct 10118 GCTAGCGTGCGTCCATCCTCCAGCTGCTTACCGGCAAAGATGAGCCTCTGCTGGTCCGGT 10059 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508 || || || ||||||||||| ||||| || || || || || | ||| || || | || Sbjct 10058 GGGATACCCTCTTTATCCTGGATCTTAGCCTTGACGTTGTCAATGGTGTC-TGAGCTCTC 10000 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| | || || || ||||| || || || || ||||| || ||||| Sbjct 9999 AACCTCCAAAGTGATGGTTTTACCGGTGAGGGTCTTGACAAAGATTTGCAT 9949 Score = 116 bits (128), Expect = 9e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || ||||||| || || | ||| || || || || || ||| Sbjct 9917 GTCGACTCCTTCTGGATGTTGTAGTCAGCGAGCGTGCGACCATCCTCCAGCTGCTTACCA 9858 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 |||||||| |||||||| ||||| ||||| || || || || ||||| ||||| || || Sbjct 9857 GCAAAAATAAGCCTCTGCTGATCCGGAGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTG 9798 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | || ||| || | || ||||| || || || ||||| || || | || Sbjct 9797 ACATTGTCAATAGTGTCG-GAGCTCTCAACCTCCAGAGTGATGGTCTTTCCCGTCAAAGT 9739 Query 104542 TTTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 9738 CTTGACGAAGATCTGCAT 9721 Score = 111 bits (122), Expect = 4e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| ||||| ||||||| || || | ||| || || || || || ||| Sbjct 10601 GTCGACTCCTTCTGGATATTGTAGTCAGCAAGCGTGCGACCATCCTCAAGCTGCTTACCA 10542 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || |||||||| || ||||| || ||||| || |||||||| || || || Sbjct 10541 GCGAAGATGAGTCTCTGTTGGTCCGGAGGGATCCCTTCCTTGTCCTGAATTTTAGCCTTC 10482 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | || || || | || || || | ||||||||||| || || || || Sbjct 10481 ACATTGTCGATTGTGTCTG-AGCTCTCAACTTCCAAGGTAATAGTCTTGCCTGTCAGAGT 10423 Query 104542 TTTTACAAATATCTGCAT 104559 || ||||| || ||||| Sbjct 10422 CTTCACAAAGATTTGCAT 10405 Score = 98.7 bits (108), Expect = 2e-15 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| ||||| || || | || || | ||| || || || ||||| ||| Sbjct 10373 GTCGACTCCTTCTGGATATTGTAATCTGCAAGCGTACGACCATCCTCAAGCTGTTTCCCA 10314 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || ||||| || || || || || ||||| || ||||||||||| || || Sbjct 10313 GCGAAGATGAGTCTCTGCTGGTCCGGTGGGATCCCTTCCTTGTCCTGAATCTTAGCCTTG 10254 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 || || || | || || || | || ||||| | || || || || ||||| || || Sbjct 10253 ACGTTATCGATCGTGTC-AGAGCTCTCCACCTCCAAAGTGATGGTTTTGCCAGTGAGGGT 10195 Query 104542 TTTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 10194 CTTCACAAAAATCTGCAT 10177 >seq14782 Length=4961 Score = 123 bits (136), Expect = 6e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 104332 TCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGA 104391 ||| ||||| || | || || || || | || || || ||||| || || || || | Sbjct 1968 TCCTCCTCTCAGACGGAGAACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCCGC 2027 Query 104392 TAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGG 104451 || || || |||||||| || || || || || || || || | ||| || || || || Sbjct 2028 GAGGGTCCTTCCGTCTTCCAGCTGCTTCCCGGCGAAGATCAGACGCTGCTGGTCCGGTGG 2087 Query 104452 TATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTAC 104511 || ||||| || ||||||||||| || || ||||| || | || ||| | ||| || Sbjct 2088 GATCCCTTCCTTGTCCTGAATCTTGGCCTTGACATTGTCGATCGTGTCGGATGATTCGAC 2147 Query 104512 CTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 |||||| || || ||||| || || || ||||| || || ||||||||||| Sbjct 2148 CTCTAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATTTT 2198 >seq7348 Length=9517 Score = 120 bits (132), Expect = 7e-22 Identities = 147/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || ||||| | || || | ||| || || || || |||||| Sbjct 421 GTCGACTCCTTCTGGATGTTGTAGTCTGCTAAGGTGCGACCATCCTCAAGCTGCTTTCCA 362 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || | ||| ||||| ||||| || ||||| || ||||| ||||| || ||| Sbjct 361 GCGAAGATGAGACGCTGCTGATCCGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTT 302 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 || || || | ||| || || | || ||||| ||||| || ||||||||||| | || Sbjct 301 ACGTTGTCAATGGTGTCAG-AGCTCTCCACCTCAAGTGTGATGGTCTTACCAGTCAAGGT 243 Query 104542 TTTTACAAATATCTGCAT 104559 || || ||||||||||| Sbjct 242 CTTCACGAATATCTGCAT 225 >seq4867 Length=12713 Score = 116 bits (128), Expect = 9e-21 Identities = 108/137 (79%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || || || ||||| || || | || | || || ||||||||||| || |||||||| Sbjct 7580 CCACCCCTAAGCCTCAGAACCAAGTGAAGAGTGGACTCTTTCTGAATGTTGTAGTCAGAA 7639 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 || |||| ||| || ||||||||||| |||||||| || || ||||||||||| || ||| Sbjct 7640 AGCGTTCGACCATCCTCTAGTTGTTTCCCAGCAAAGATGAGTCTCTGTTGATCTGGTGGT 7699 Query 104453 ATTCCTTCTTTATCCTG 104469 || || ||||| ||||| Sbjct 7700 ATCCCCTCTTTGTCCTG 7716 >seq3737 Length=14779 Score = 113 bits (124), Expect = 1e-19 Identities = 139/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 104370 CTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAA 104429 |||| || || || || |||| ||||| || || ||||| || || || || || || | Sbjct 9320 CTTTGTGGATGTTGTAATCAGCAAGAGTCCTGCCATCTTCGAGCTGCTTACCGGCGAAGA 9379 Query 104430 TTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTT 104489 | | |||||| ||||| ||||| || ||||| ||||| || ||||| ||| | || || | Sbjct 9380 TCAACCTCTGCTGATCGGGAGGGATACCTTCCTTATCGTGGATCTTGGCTGTAACGTTGT 9439 Query 104490 CTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAA 104549 | | || ||| ||| ||||| || || || ||||| || ||||| || || || | Sbjct 9440 CGATCGTGTCGGAGCTTTCAACCTCGAGGGTGATCGTCTTTCCGGTAAGAGTCTTAACGA 9499 Query 104550 ATATCTGCAT 104559 |||||||||| Sbjct 9500 ATATCTGCAT 9509 >seq10768 Length=6938 Score = 107 bits (118), Expect = 4e-18 Identities = 88/107 (82%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || |||||||| || || ||||||| || |||| || || ||||| ||||| ||| Sbjct 3343 GTGGACTCTTTCTGGATGTTGTAGTCAGCGAGCGTTCGGCCATCCTCTAGCTGTTTCCCA 3402 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTG 104469 ||||| ||||||||||||||||| || ||||| || ||||||||||| Sbjct 3403 GCAAAGATTAGCCTCTGTTGATCTGGTGGTATCCCCTCTTTATCCTG 3449 >seq1346 Length=23970 Score = 104 bits (114), Expect = 5e-17 Identities = 87/107 (81%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || |||||||| || || ||||| | || |||||||| ||||| |||||||| ||| Sbjct 5887 GTTGACTCTTTCTGGATGTTGTAGTCCGCAAGGGTTCTACCATCTTCAAGTTGTTTGCCA 5828 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTG 104469 || || || |||||||||||||| || |||||||| || || ||||| Sbjct 5827 GCGAATATCAGCCTCTGTTGATCCGGTGGTATTCCCTCCTTGTCCTG 5781 >seq13765 Length=5394 Score = 95.1 bits (104), Expect = 3e-14 Identities = 156/224 (70%), Gaps = 6/224 (3%) Strand=Plus/Plus Query 104340 TTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTC 104399 |||| | ||| || || || | ||| || || || || || ||||| || | || | Sbjct 2935 TTAGACGAAGCACAAGGTGAAGTGTTGACTCCTTTTGGATGTTATAATCTGCAAGCCTGT 2994 Query 104400 TACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTT 104459 ||| || || |||||| | | |||||| || || ||||| || || || | ||||||| Sbjct 2995 AACCATCCTCCAGTTGTCTACTAGCAAATATGAGTCTCTGCTGGTCTGGTGCGATTCCTT 3054 Query 104460 CTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATC---GCTAGGTTCTACCTCTA 104516 | | ||||||||||||| |||||| | | ||||| || |||| || || |||| Sbjct 3055 CCATGTCCTGAATCTTTGTCTTTACACTGTAAACGGTGTCTGAGCTA---TCAACTTCTA 3111 Query 104517 GTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 | ||| ||| ||| | |||||| |||||||| |||||| Sbjct 3112 AGGCAATGACTTTAGAAGTGATTGTTTTCACAAATATTTGCATT 3155 >seq14792 Length=4957 Score = 91.5 bits (100), Expect = 3e-13 Identities = 135/189 (71%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || |||| ||||| ||||||| | || | ||| || || || ||| | ||| Sbjct 2944 GTTGAATCCTTCTTGATATTGTAGTCAGCCAATGTCCGACCATCCTCAAGCTGTCTGCCA 2885 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || ||||| || || || || || || ||||||||||| ||||| || || Sbjct 2884 GCAAATATCAGTCTCTGCTGGTCCGGCGGAATACCCTCTTTATCCTGGATCTTAGCCTTG 2825 Query 104483 ACATTTTCTACGGTATCGCTAGGTTC-TACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 || || || | ||| ||| | ||| | || |||| | || ||| || |||| ||| Sbjct 2824 ACGTTATCGATGGTGTCGGAACCTTCACATATCAAGTGGATTA-ACTTTCCTGTAATTGT 2766 Query 104542 TTTTACAAA 104550 |||||||| Sbjct 2765 CTTTACAAA 2757 >seq2812 Length=17334 Score = 84.2 bits (92), Expect = 5e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 104449 AGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTC 104508 || ||| |||||||| ||||| ||||| || || ||||| || | ||| ||||| || Sbjct 3038 AGTTATACCTTCTTTGTCCTGGATCTTAGCCTTGACATTGTCGATGGTGTCGCTGCTCTC 2979 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 ||||| || || || ||||| || || || ||||| || ||||||||||| || Sbjct 2978 CACCTCGAGGGTGATGGTCTTGCCCGTTAGCGTTTTCACGAATATCTGCATCTT 2925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1150443454634256