Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raphanus_20raphanistrum_20subsp._20raphanistrum_20[genbank_20GCA_5F0 00769845.1_202014-10-28] 64,732 sequences; 253,833,977 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq4932 125 4e-24 seq2431 123 1e-23 seq675 122 5e-23 seq12271 116 2e-21 seq5756 116 2e-21 seq3868 116 2e-21 seq2226 113 2e-20 seq521 113 2e-20 seq710 111 8e-20 seq325 109 3e-19 seq16797 104 1e-17 seq23728 102 4e-17 seq1255 102 4e-17 seq646 102 4e-17 seq13764 100 1e-16 seq13734 100 1e-16 seq11827 100 1e-16 seq2916 100 1e-16 seq2346 100 1e-16 seq34122 98.7 5e-16 seq4070 98.7 5e-16 seq16607 96.9 2e-15 seq53929 95.1 6e-15 seq46175 95.1 6e-15 seq4394 95.1 6e-15 seq28844 93.3 2e-14 seq23087 93.3 2e-14 seq22989 93.3 2e-14 seq17295 91.5 8e-14 seq512 91.5 8e-14 seq474 91.5 8e-14 seq223 91.5 8e-14 >seq4932 Length=12621 Score = 125 bits (138), Expect = 4e-24 Identities = 85/95 (89%), Gaps = 1/95 (1%) Strand=Plus/Plus Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504 |||||| |||| |||||||| | | |||||||| ||||||||||||||||||||||||| Sbjct 4584 AAAAATAAAAT-GGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCACGACG 4642 Query 11505 CTCTRACCAACTGAGCTAATGGGCCGTCGACGATT 11539 |||| |||||||||||||||||||| ||| ||||| Sbjct 4643 CTCTAACCAACTGAGCTAATGGGCCTTCGTCGATT 4677 >seq2431 Length=18656 Score = 123 bits (136), Expect = 1e-23 Identities = 85/97 (88%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 11435 AGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTAT 11494 |||||||| |||||| | |||||||||| | | |||||||| ||||||||||||||| Sbjct 12432 AGAATTAACAAAAAAATGATTTGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTAT 12491 Query 11495 TAGCACGACGCTCTRACCAACTGAGCTAATGGGCCGT 11531 |||||||||||||| ||||||||||||||||| |||| Sbjct 12492 TAGCACGACGCTCTAACCAACTGAGCTAATGGACCGT 12528 >seq675 Length=30944 Score = 122 bits (134), Expect = 5e-23 Identities = 78/86 (91%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 |||||| ||||||||||||| | | |||||||| |||||||||||||||||||||||| Sbjct 7445 AAAAAAAGAAATTGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCACGAC 7386 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| |||||||||||||||||||| Sbjct 7385 GCTCTAACCAACTGAGCTAATGGGCC 7360 >seq12271 Length=6085 Score = 116 bits (128), Expect = 2e-21 Identities = 83/95 (87%), Gaps = 2/95 (2%) Strand=Plus/Minus Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504 ||||| ||| ||||||||| | | |||||||| ||||||||||||||||||||||||| Sbjct 4791 AAAAA--AAAATGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCACGACG 4734 Query 11505 CTCTRACCAACTGAGCTAATGGGCCGTCGACGATT 11539 |||| |||||||||||||||||||| | || |||| Sbjct 4733 CTCTAACCAACTGAGCTAATGGGCCTTTGATGATT 4699 >seq5756 Length=11408 Score = 116 bits (128), Expect = 2e-21 Identities = 72/78 (92%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||||||||||||| | | |||||||| ||||||||||||||||||||||||||||| || Sbjct 9488 AAATTGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAAC 9547 Query 11512 CAACTGAGCTAATGGGCC 11529 |||||||||||||||||| Sbjct 9548 CAACTGAGCTAATGGGCC 9565 >seq3868 Length=14523 Score = 116 bits (128), Expect = 2e-21 Identities = 78/88 (89%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 |||||| || |||||||||| | | |||||||| | |||||||||||||||||||||| Sbjct 10779 AAAAAAAAAAGTTGGCCCATGCAGGTTTCGAACCTGCTACCTTCGCGTTATTAGCACGAC 10720 Query 11504 GCTCTRACCAACTGAGCTAATGGGCCGT 11531 ||||| |||||||||||||||||||||| Sbjct 10719 GCTCTAACCAACTGAGCTAATGGGCCGT 10692 >seq2226 Length=19321 Score = 113 bits (124), Expect = 2e-20 Identities = 78/88 (89%), Gaps = 2/88 (2%) Strand=Plus/Plus Query 11446 AAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGC 11505 ||||| || ||||||||| | | |||||||| |||||||||||||||||||||||||| Sbjct 4861 AAAATAAA--TGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCACGACGC 4918 Query 11506 TCTRACCAACTGAGCTAATGGGCCGTCG 11533 ||| |||||||||||||||||||| ||| Sbjct 4919 TCTAACCAACTGAGCTAATGGGCCTTCG 4946 >seq521 Length=33513 Score = 113 bits (124), Expect = 2e-20 Identities = 77/86 (90%), Gaps = 1/86 (1%) Strand=Plus/Plus Query 11445 AAAAATCA-AATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 |||||| | || ||||||||| | | |||||||| |||||||||||||||||||||||| Sbjct 12933 AAAAATAATAAATGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCACGAC 12992 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| |||||||||||||||||||| Sbjct 12993 GCTCTAACCAACTGAGCTAATGGGCC 13018 >seq710 Length=30383 Score = 111 bits (122), Expect = 8e-20 Identities = 78/89 (88%), Gaps = 2/89 (2%) Strand=Plus/Plus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 ||| ||||||||| ||||| || | ||||||||||| |||||||||||||||||||| Sbjct 29066 AATTAAAAATCAA--TGGCCTATACAGGGATCGAACCTGTGACCTTCGCGTTATTAGCAC 29123 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| ||||||||||||||| |||| Sbjct 29124 GACGCTCTAACCAACTGAGCTAATAGGCC 29152 Score = 102 bits (112), Expect = 4e-17 Identities = 69/78 (88%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||| || | ||||||||||| |||||||||||||||||||||||||||| || Sbjct 29230 AAAATGGCCTATACAGGGATCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAAC 29289 Query 11512 CAACTGAGCTAATGGGCC 11529 ||||||||||||| |||| Sbjct 29290 CAACTGAGCTAATAGGCC 29307 >seq325 Length=38378 Score = 109 bits (120), Expect = 3e-19 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| | | |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 27106 TGGCCCATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 27047 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 27046 TGAGCTAATGGGCC 27033 >seq16797 Length=4242 Score = 104 bits (114), Expect = 1e-17 Identities = 74/86 (86%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 |||||| | | |||||||| | | |||||||| ||||||||||||||||||||||| Sbjct 2864 AAAAAACTAGAGTGGCCCATACAGGTTTCGAACCTGTGACCTTCGCGTTATTAGCACGAC 2923 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| |||||||||||||||||||| Sbjct 2924 GCTCTAACCAACTGAGCTAATGGGCC 2949 >seq23728 Length=2506 Score = 102 bits (112), Expect = 4e-17 Identities = 73/84 (87%), Gaps = 3/84 (4%) Strand=Plus/Plus Query 11446 AAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGC 11505 ||||||| ||||| || | ||||||||||| ||||||||||||||||||||||||| Sbjct 1534 AAAATCA---TGGCCTATACAGGGATCGAACCTGTGACCTTCGCGTTATTAGCACGACGC 1590 Query 11506 TCTRACCAACTGAGCTAATGGGCC 11529 ||| ||||||||||||||| |||| Sbjct 1591 TCTAACCAACTGAGCTAATAGGCC 1614 >seq1255 Length=24756 Score = 102 bits (112), Expect = 4e-17 Identities = 83/100 (83%), Gaps = 1/100 (1%) Strand=Plus/Minus Query 11430 AATATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGC 11489 ||| |||||| || || ||| |||| |||| || | | |||||||| ||||||||| Sbjct 5554 AATGTAGAATAAAAAAGAAAATAAAT-GGCCTATACAGGTTTCGAACCTGTGACCTTCGC 5496 Query 11490 GTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||||||||| ||||||||||||||| |||| Sbjct 5495 GTTATTAGCACGACGCTCTAACCAACTGAGCTAATAGGCC 5456 Score = 98.7 bits (108), Expect = 5e-16 Identities = 73/86 (85%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 ||| || |||| ||||| || | | |||||||| ||||||||||||||||||||||| Sbjct 16149 AAAGAAACAAAATGGCCTATACAGGTTTCGAACCTGTGACCTTCGCGTTATTAGCACGAC 16090 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| ||||||||||||||| |||| Sbjct 16089 GCTCTAACCAACTGAGCTAATAGGCC 16064 >seq646 Length=31242 Score = 102 bits (112), Expect = 4e-17 Identities = 69/78 (88%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||| || | ||||||||||| |||||||||||||||||||||||||||| || Sbjct 21275 AAAGTGGCCTATACAGGGATCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAAC 21216 Query 11512 CAACTGAGCTAATGGGCC 11529 ||||||||||||| |||| Sbjct 21215 CAACTGAGCTAATAGGCC 21198 Score = 102 bits (112), Expect = 4e-17 Identities = 69/78 (88%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||| || | ||||||||||| |||||||||||||||||||||||||||| || Sbjct 21426 AAAATGGCCTATACAGGGATCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAAC 21367 Query 11512 CAACTGAGCTAATGGGCC 11529 ||||||||||||| |||| Sbjct 21366 CAACTGAGCTAATAGGCC 21349 Score = 98.7 bits (108), Expect = 5e-16 Identities = 78/93 (84%), Gaps = 1/93 (1%) Strand=Plus/Minus Query 11437 AATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTA 11496 ||| ||||||||| | |||||| || | | |||||||| |||||||||||||||| Sbjct 21592 AATAAATAAAAAAATGA-TTGGCCTATACAGGTTTCGAACCTGTGACCTTCGCGTTATTA 21534 Query 11497 GCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||| ||||||||||||||| |||| Sbjct 21533 GCACGACGCTCTAACCAACTGAGCTAATAGGCC 21501 >seq13764 Length=5394 Score = 100 bits (110), Expect = 1e-16 Identities = 68/77 (88%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 11453 AATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACC 11512 || |||||||| | | |||||||| |||||||||||||||||||||||||||| ||| Sbjct 2437 AAGTGGCCCATACAGGTTTCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAACC 2378 Query 11513 AACTGAGCTAATGGGCC 11529 ||||||||||||||||| Sbjct 2377 AACTGAGCTAATGGGCC 2361 >seq13734 Length=5401 Score = 100 bits (110), Expect = 1e-16 Identities = 59/62 (95%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 11471 TCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530 |||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||| Sbjct 582 TCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATAGGCCG 641 Query 11531 TC 11532 || Sbjct 642 TC 643 >seq11827 Length=6318 Score = 100 bits (110), Expect = 1e-16 Identities = 75/89 (84%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 ||||||||| | |||||| || | | |||||||| |||||||||||||||||||| Sbjct 1689 AATAAAAAAAAGAGTTGGCCTATACAGGTTTCGAACCTGTGACCTTCGCGTTATTAGCAC 1630 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| ||||||||||||||| |||| Sbjct 1629 GACGCTCTAACCAACTGAGCTAATAGGCC 1601 >seq2916 Length=16994 Score = 100 bits (110), Expect = 1e-16 Identities = 70/79 (89%), Gaps = 1/79 (1%) Strand=Plus/Plus Query 11452 AAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRA 11510 |||| ||||| ||| | | |||||||| ||||||||||||||||||||||||||||| | Sbjct 1797 AAATATGGCCTATGCAGGTTTCGAACCTGCGACCTTCGCGTTATTAGCACGACGCTCTAA 1856 Query 11511 CCAACTGAGCTAATGGGCC 11529 |||||||||||||| |||| Sbjct 1857 CCAACTGAGCTAATAGGCC 1875 >seq2346 Length=18888 Score = 100 bits (110), Expect = 1e-16 Identities = 72/84 (86%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 11446 AAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGC 11505 |||| ||| ||||| || | ||||||||||| ||||||||||||||||||||||||| Sbjct 12859 AAAAAGAAAGTGGCCTATACAGGGATCGAACCTGTGACCTTCGCGTTATTAGCACGACGC 12800 Query 11506 TCTRACCAACTGAGCTAATGGGCC 11529 ||| |||| |||||||||| |||| Sbjct 12799 TCTAACCAGCTGAGCTAATAGGCC 12776 >seq34122 Length=1166 Score = 98.7 bits (108), Expect = 5e-16 Identities = 74/87 (85%), Gaps = 2/87 (2%) Strand=Plus/Minus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 |||||| || ||||| || | ||||||||||| ||||||||||||||||| ||||| Sbjct 734 AAAAAA--AAGATGGCCTATACAGGGATCGAACCTGTGACCTTCGCGTTATTAGAACGAC 677 Query 11504 GCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||| ||||||||||||||| ||||| Sbjct 676 GCTCTAACCAACTGAGCTAATAGGCCG 650 >seq4070 Length=14120 Score = 98.7 bits (108), Expect = 5e-16 Identities = 68/78 (87%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511 ||| ||||| || | ||||||||||| |||||||||||||||||||||||||||| || Sbjct 5997 AAAGTGGCCTATACAGGGATCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAAC 6056 Query 11512 CAACTGAGCTAATGGGCC 11529 || |||||||||| |||| Sbjct 6057 CAGCTGAGCTAATAGGCC 6074 >seq16607 Length=4302 Score = 96.9 bits (106), Expect = 2e-15 Identities = 76/91 (84%), Gaps = 3/91 (3%) Strand=Plus/Plus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 ||||||||| | ||||| || | | |||||||| |||||||||||||||||||| Sbjct 1267 AATAAAAAA---ATGTGGCCTATACAGGTTTCGAACCTGTGACCTTCGCGTTATTAGCAC 1323 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCCGT 11531 |||||||| ||||||||||||||| |||||| Sbjct 1324 GACGCTCTAACCAACTGAGCTAATAGGCCGT 1354 >seq53929 Length=537 Score = 95.1 bits (104), Expect = 6e-15 Identities = 72/86 (84%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 ||| || |||| ||||| || | | |||||||| ||||||||||||||||||||||| Sbjct 160 AAAGAAACAAAATGGCCTATACAGGTTTCGAACCTGTGACCTTCGCGTTATTAGCACGAC 101 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| |||||||||||||| |||| Sbjct 100 GCTCTACCCAACTGAGCTAATAGGCC 75 >seq46175 Length=679 Score = 95.1 bits (104), Expect = 6e-15 Identities = 73/86 (85%), Gaps = 1/86 (1%) Strand=Plus/Plus Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504 |||||| || | |||| || | | |||||||| |||||||||||||||||||||||| Sbjct 595 AAAAATGAAGT-GGCCTATACAGGTTTCGAACCTGTGACCTTCGCGTTATTAGCACGACG 653 Query 11505 CTCTRACCAACTGAGCTAATGGGCCG 11530 |||| ||||||||||||||| ||||| Sbjct 654 CTCTAACCAACTGAGCTAATAGGCCG 679 >seq4394 Length=13506 Score = 95.1 bits (104), Expect = 6e-15 Identities = 72/86 (84%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 ||| || |||| ||||| || | | |||||||| ||||||||||||||||||||||| Sbjct 20 AAAGAAACAAAATGGCCTATACAGGTTTCGAACCTGTGACCTTCGCGTTATTAGCACGAC 79 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| |||||||||||||| |||| Sbjct 80 GCTCTACCCAACTGAGCTAATAGGCC 105 Score = 93.3 bits (102), Expect = 2e-14 Identities = 67/78 (86%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 11453 AATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACC 11512 || ||||| || | | |||||||| |||||||||||||||||||||||||||| ||| Sbjct 180 AAATGGCCTATACAGGTTTCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAACC 239 Query 11513 AACTGAGCTAATGGGCCG 11530 |||||||||||| ||||| Sbjct 240 AACTGAGCTAATAGGCCG 257 >seq28844 Length=1681 Score = 93.3 bits (102), Expect = 2e-14 Identities = 84/104 (81%), Gaps = 7/104 (7%) Strand=Plus/Minus Query 11433 ATAGAATTAATA--AAAAA----TCAAAT-TGGCCCATGAAAGGATCGAACCTTCGACCT 11485 |||||| | ||| ||||| | |||| ||||| || | | |||||||| ||||| Sbjct 1445 ATAGAAATTATACTAAAAAGTTCTAAAATCTGGCCTATACAGGTTTCGAACCTGTGACCT 1386 Query 11486 TCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||||||||||||| ||||||||||||||| |||| Sbjct 1385 TCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATAGGCC 1342 >seq23087 Length=2626 Score = 93.3 bits (102), Expect = 2e-14 Identities = 71/85 (84%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504 ||||| || ||||| || | | |||||||| |||||||||||||||||||||||| Sbjct 2472 AAAAAGGTAAATGGCCTATACAGGTTTCGAACCTGTGACCTTCGCGTTATTAGCACGACG 2531 Query 11505 CTCTRACCAACTGAGCTAATGGGCC 11529 |||| ||||||||||||||| |||| Sbjct 2532 CTCTAACCAACTGAGCTAATAGGCC 2556 >seq22989 Length=2649 Score = 93.3 bits (102), Expect = 2e-14 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 |||||| || | | |||||||| |||||||||||||||||||||||||||| ||||| Sbjct 1647 TTGGCCTATACAGGTTTCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 1706 Query 11515 CTGAGCTAATGGGCC 11529 |||||||||| |||| Sbjct 1707 CTGAGCTAATAGGCC 1721 >seq17295 Length=4091 Score = 91.5 bits (100), Expect = 8e-14 Identities = 68/79 (86%), Gaps = 1/79 (1%) Strand=Plus/Plus Query 11452 AAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRA 11510 |||| ||||| || | | |||||||| |||||||||||||||||||||||||||| | Sbjct 382 AAATCTGGCCTATACAGGTTTCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAA 441 Query 11511 CCAACTGAGCTAATGGGCC 11529 |||||||||||||| |||| Sbjct 442 CCAACTGAGCTAATAGGCC 460 >seq512 Length=33671 Score = 91.5 bits (100), Expect = 8e-14 Identities = 68/79 (86%), Gaps = 1/79 (1%) Strand=Plus/Minus Query 11452 AAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRA 11510 |||| ||||| || | | |||||||| |||||||||||||||||||||||||||| | Sbjct 11540 AAATCTGGCCTATACAGGTTTCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAA 11481 Query 11511 CCAACTGAGCTAATGGGCC 11529 |||||||||||||| |||| Sbjct 11480 CCAACTGAGCTAATAGGCC 11462 >seq474 Length=34383 Score = 91.5 bits (100), Expect = 8e-14 Identities = 54/57 (95%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 11471 TCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||| |||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 14710 TCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGG 14654 >seq223 Length=42247 Score = 91.5 bits (100), Expect = 8e-14 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 11471 TCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||| Sbjct 10313 TCGAACCTGTGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATAGGCC 10255 Lambda K H 0.638 0.409 0.919 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261284904035632