Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raphanus_20raphanistrum_20subsp._20raphanistrum_20[genbank_20GCA_5F0 00769845.1_202014-10-28] 64,732 sequences; 253,833,977 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq2054 132 4e-26 seq20570 131 2e-25 seq7912 125 6e-24 seq964 120 3e-22 seq1703 118 9e-22 seq4396 113 4e-20 seq37186 105 6e-18 seq25552 105 6e-18 seq1045 102 7e-17 seq14782 98.7 9e-16 seq12662 93.3 4e-14 seq24793 91.5 1e-13 seq11485 91.5 1e-13 seq3667 89.7 5e-13 seq806 86.0 6e-12 >seq2054 Length=20018 Score = 132 bits (146), Expect = 4e-26 Identities = 123/156 (79%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 ||| || |||||||| ||| | ||||| ||||| |||||||||||||| ||||||||||| Sbjct 3238 ATCTTCGAGCTGTTTACCGGCGAAGATCAATCTCTGCTGATCTGGAGGGATACCTTCTTT 3297 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | || || |||||||| | ||| ||||| | | ||||| || | ||||| Sbjct 3298 GTCTTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGAT 3357 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||| ||||| || || |||||||| ||||||||||| Sbjct 3358 GGTCTTTCCGGTTAGGGTTTTCACGAAGATCTGCAT 3393 >seq20570 Length=3172 Score = 131 bits (144), Expect = 2e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 |||||||||||||| | ||||| ||||| || | ||| || || || || | Sbjct 304 CGCAACACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCCAAGGTTCTCCCG 363 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||||| ||| ||||| | ||||| | || |||||||| |||||||| ||||| ||| Sbjct 364 TCCTCCAACTGCTTTCCTGCGAAGATAAGCCTCTGCTGATCCGGAGGAATCCCTTCCTTG 423 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || ||||| ||| | ||| ||||||| | || || || | ||||| Sbjct 424 TCCTGGATCTTGGCCTTAACGTTGTCGATGGTGTCAGAGCTTTCCACCTCGAGGGTGATT 483 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || ||||| || ||||||||||| ||||||||||| Sbjct 484 GTCTTTCCTGTGAGAGTTTTCACGAAGATCTGCAT 518 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 94805 TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGT 94864 |||||||| || ||||| || | ||| || || | ||| | |||||| || || Sbjct 88 TGCAAAGTTGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTCCTTCCATCCTCGAGTTGC 147 Query 94865 TTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTT 94924 || ||| ||||||| || || ||||| || || || || || || || || | || || Sbjct 148 TTGCCGGCAAAGATCAACCTCTGCTGGTCAGGTGGGATCCCCTCCTTATCCTGGATCTTA 207 Query 94925 GCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTA 94984 ||||| ||| | | | |||||| | | || || || | ||||| || ||||| || Sbjct 208 GCCTTAACGTTGTCAATAGTGTCGGAGCTCTCCACCTCCAAAGTGATTGTCTTTCCGGTC 267 Query 94985 AGAGTTTTCACAAAGATCTGCAT 95007 | || || |||||||||||||| Sbjct 268 AATGTCTTGACAAAGATCTGCAT 290 >seq7912 Length=9007 Score = 125 bits (138), Expect = 6e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 ||||| | || |||||||||||||| | || || |||||||| | ||| || ||| Sbjct 6336 CCTCCACGCAGACGCAACACCAAGTGAAGTGTGGACTCCTTTTGGATGTTGTAGTCGGCT 6395 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| |||||| |||||||| || | ||||| | || ||||| || ||||| Sbjct 6396 AAGGTGCGACCATCCTCAAGCTGTTTCCCAGCGAAGATGAGCCTCTGCTGGTCCGGAGGG 6455 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 ||||| || ||||| | || || ||||||||| | | | ||||| | | || || Sbjct 6456 ATACCCTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCAACC 6515 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || | || ||||| |||||||| | ||| || |||||||||||||||| Sbjct 6516 TCCAAAGTAATGGTCTTTCCAGTCAAAGTCTTGACAAAGATCTGCATGC 6564 Score = 113 bits (124), Expect = 4e-20 Identities = 155/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 |||||||||||||| | || || |||||||| | || || ||| | ||| | Sbjct 6120 CGCAACACCAAGTGAAGTGTGGACTCCTTTTGGATATTGTAGTCGGCTAAGGTGCGACCA 6179 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||| ||||| || || | ||||| | | ||||| || ||||| |||||||| || Sbjct 6180 TCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTA 6239 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || |||||||| | | | ||||||| | || || || | ||||||| Sbjct 6240 TCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCAGAGCTCTCCACCTCCAACGTGATG 6299 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || || || ||||| || || |||||||||||||||| Sbjct 6300 GTCTTGCCGGTAAGTGTCTTGACAAAGATCTGCATGC 6336 Score = 113 bits (124), Expect = 4e-20 Identities = 145/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 ||||| |||||||| | ||| || || || || || || || ||||| || ||| Sbjct 6594 GTAGACTCCTTTTGGATGTTGTAGTCTGCCAATGTTCTGCCGTCTTCGAGCTGCTTGCCG 6653 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 | ||||| | || |||||||| ||||| |||||||| ||||| | ||| || || ||| Sbjct 6654 GCGAAGATGAGCCTCTGCTGATCGGGAGGGATACCTTCCTTGTCCTGAATCTTGGCTTTG 6713 Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990 ||| | ||| ||||| | | || || || | |||||||| ||||| || ||||| Sbjct 6714 ACGTTGTCGATTGTGTCGGAGCTTTCCACCTCGAGGGTGATGGTCTTTCCCGTGAGAGTC 6773 Query 94991 TTCACAAAGATCTGCATGCT 95010 || || ||||||||||| || Sbjct 6774 TTAACGAAGATCTGCATCCT 6793 >seq964 Length=27231 Score = 120 bits (132), Expect = 3e-22 Identities = 160/219 (73%), Gaps = 4/219 (2%) Strand=Plus/Minus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA- 94851 |||||||| | ||| | || || ||||| || | || ||||| || || || || Sbjct 10391 CGCAACACAAGGTGAAGGGTCGACTCCTTCTGGATATTGTAATCTG-CA-AGCGTACGAC 10334 Query 94852 -ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTT 94910 |||||| |||||||| || | ||||| | ||| ||||| || || || || ||||| | Sbjct 10333 CATCCTCAAGCTGTTTCCCAGCGAAGATGAGTCTCTGCTGGTCCGGTGGGATCCCTTCCT 10274 Query 94911 TGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGA 94970 |||| | ||| || ||||||||| ||| ||||||| | || || || | |||| Sbjct 10273 TGTCCTGAATCTTAGCCTTGACGTTATCGATCGTGTCAGAGCTCTCCACCTCCAAAGTGA 10214 Query 94971 TGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 ||||||| ||||| || || |||||||| |||||||||| Sbjct 10213 TGGTTTTGCCAGTGAGGGTCTTCACAAAAATCTGCATGC 10175 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || |||||||| | | || | || | ||| || ||||| || | || |||||| | Sbjct 9719 CCACCTCTCAACCTGAGAACGAGATGGAGAGTCGACTCCTTCTGGATATTGTAATCGGCC 9660 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | || |||||| |||||||| ||| | ||||| | || ||||| || |||||| Sbjct 9659 AAGGTACGTCCATCCTCGAGCTGTTTACCGGCGAAGATGAGCCTCTGCTGGTCCGGAGGA 9600 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 |||||||| ||||| | || || ||||||||| ||| || || | | ||||| Sbjct 9599 ATACCTTCCTTGTCCTGGATCTTAGCCTTGACGTTATCGATGGTATCGGAGCTCTCGACT 9540 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | |||||||| || || || ||||||||||| || || ||||| Sbjct 9539 TCGAGAGTGATGGTCTTGCCGGTGAGAGTTTTCACGAAAATTTGCAT 9493 Score = 104 bits (114), Expect = 2e-17 Identities = 169/241 (70%), Gaps = 2/241 (1%) Strand=Plus/Minus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| | | || || ||||| | ||| | ||| | |||| ||||| || || || | Sbjct 10188 AAAAATCTGCATGCCACCTCTGAGTCGAAGCACAAGATGCAGCGTAGACTCTTTCTGAAT 10129 Query 94828 GTTATAATC-GCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTT 94886 ||| || || ||| | ||| |||||||||||| || ||| ||||||| | || | Sbjct 10128 GTTGTAGTCAGCT-AGCGTGCGTCCATCCTCCAGCTGCTTACCGGCAAAGATGAGCCTCT 10070 Query 94887 GCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGT 94946 |||| || || || ||||| ||||| || | || || ||||||||| | | | |||| Sbjct 10069 GCTGGTCCGGTGGGATACCCTCTTTATCCTGGATCTTAGCCTTGACGTTGTCAATGGTGT 10010 Query 94947 CAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCA 95006 | | | || || || | ||||||||||| || || || || || |||||||| |||| Sbjct 10009 CTGAGCTCTCAACCTCCAAAGTGATGGTTTTACCGGTGAGGGTCTTGACAAAGATTTGCA 9950 Query 95007 T 95007 | Sbjct 9949 T 9949 Score = 93.3 bits (102), Expect = 4e-14 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 |||||||||||| || || |||| || | || |||||||| ||||| || || || || Sbjct 9876 ATCCTCCAGCTGCTTACCAGCAAAAATAAGCCTCTGCTGATCCGGAGGGATGCCCTCCTT 9817 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | || || |||||||| | | | |||||| | | || || || | ||||| Sbjct 9816 GTCCTGGATCTTCGCCTTGACATTGTCAATAGTGTCGGAGCTCTCAACCTCCAGAGTGAT 9757 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||| ||||| || | ||| || || ||||||||||| Sbjct 9756 GGTCTTTCCCGTCAAAGTCTTGACGAAGATCTGCAT 9721 Score = 87.8 bits (96), Expect = 2e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 |||||| ||||| || || | ||||| | ||| || || || ||||| || ||||| || Sbjct 10560 ATCCTCAAGCTGCTTACCAGCGAAGATGAGTCTCTGTTGGTCCGGAGGGATCCCTTCCTT 10501 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | |||||| ||||| || | ||| ||||| | | || || || | || || Sbjct 10500 GTCCTGAATTTTAGCCTTCACATTGTCGATTGTGTCTGAGCTCTCAACTTCCAAGGTAAT 10441 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || ||||| ||||||||||| ||||| Sbjct 10440 AGTCTTGCCTGTCAGAGTCTTCACAAAGATTTGCAT 10405 >seq1703 Length=21771 Score = 118 bits (130), Expect = 9e-22 Identities = 149/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 94805 TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGT 94864 |||| ||| || ||||| || | |||||||| | ||| | |||||||| ||| Sbjct 18620 TGCAGAGTCGACTCCTTCTGTATATTATAATCAGCAAGAGTCCTCCCATCCTCCAACTGC 18679 Query 94865 TTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTT 94924 ||||| ||||||| | || |||||||| ||||| || ||||| || || | || || Sbjct 18680 TTTCCCGCAAAGATCAGCCTCTGCTGATCCGGAGGGATCCCTTCCTTATCTTGTATCTTA 18739 Query 94925 GCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTA 94984 ||||||||| | ||| || |||| | || || || | ||||| || ||||| ||| Sbjct 18740 GCCTTGACGTTGTCGATTGTATCAGAGCTCTCCACCTCCAAAGTGATAGTCTTTCCGGTA 18799 Query 94985 AGAGTTTTCACAAAGATCTGCATGC 95009 ||||| || || ||||||||||||| Sbjct 18800 AGAGTCTTGACGAAGATCTGCATGC 18824 Score = 114 bits (126), Expect = 1e-20 Identities = 152/211 (72%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||| | ||| || ||||| || | || || || || ||| |||||| Sbjct 17930 ACCAAGTGAAGAGTCGACTCCTTCTGGATATTGTAGTCTGCCAAGGTGCGACCATCCTCG 17989 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 ||||| ||||| | ||||| | | |||||||| ||||| |||||||| ||||| | Sbjct 17990 AGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCCGGAGGGATACCTTCCTTGTCCTGG 18049 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || || ||||| ||| | | | |||||||| | || || || | ||||| || || Sbjct 18050 ATCTTAGCCTTCACGTTGTCAATAGTGTCAGAGCTCTCAACCTCCAATGTGATAGTCTTC 18109 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || |||||||| || |||||||||||||||| Sbjct 18110 CCGGTAAGAGTCTTGACAAAGATCTGCATGC 18140 Score = 113 bits (124), Expect = 4e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 ||||| |||||||| | ||||| ||||| || | || |||||| || ||| | Sbjct 18836 CGCAAGACCAAGTGAAGCGTAGACTCCTTCTGGATATTGTAATCGGCCAAGGTGCGACCA 18895 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||| ||||| |||||| | ||||| | | |||||||| ||||| || ||||| ||| Sbjct 18896 TCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGAGGGATCCCTTCCTTG 18955 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || || || ||| | ||| ||||| | | || || || | ||||| Sbjct 18956 TCCTGGATCTTGGCTTTCACGTTGTCGATGGTGTCGGAGCTTTCCACCTCGAGGGTGATT 19015 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || ||||||||||| ||||| ||||| Sbjct 19016 GTCTTCCCGGTGAGAGTTTTCACGAAGATTTGCAT 19050 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 ||||| |||||||| | |||||||| || || | ||| || || | ||| | | Sbjct 18380 CGCAAGACCAAGTGAAGCGTAGATTCTTTCTGGATGTTGTAGTCAGCAAGAGTCCTCCCA 18439 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||||| ||| || ||| ||||||| || || ||||| || || || || ||||| || Sbjct 18440 TCCTCCAACTGCTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGTGGGATCCCTTCCTTA 18499 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | ||| || |||||||| | | | ||| || | | || || || | || || Sbjct 18500 TCCTGAATCTTAGCCTTGACATTGTCAATAGTATCGGAGCTCTCCACCTCCAAAGTAATA 18559 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || |||||||| | ||| || |||||||||||||| Sbjct 18560 GTCTTTCCAGTCAAAGTCTTGACAAAGATCTGCAT 18594 Score = 86.0 bits (94), Expect = 6e-12 Identities = 149/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 || ||||||||||| | || || || || || | ||| ||||| || ||| | Sbjct 18152 CGTAACACCAAGTGAAGGGTCGACTCTTTCTGAATGTTGTAATCAGCCAAGGTGCGACCA 18211 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||| ||||| || || | || || | || ||||| || ||||| ||||| |||||| Sbjct 18212 TCCTCGAGCTGCTTCCCAGCGAATATCAGCCTCTGCTGGTCCGGAGGGATACCCTCTTTG 18271 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | ||||| || || ||| | | | ||||| | || || || | ||||| Sbjct 18272 TCTTGGATTTTCGCTTTCACGTTGTCAATGGTGTCGGAACTCTCCACCTCTAAAGTGATC 18331 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || ||||| || | || || || ||||||||||||| Sbjct 18332 GTCTTTCCTGTCAACGTCTTAACGAAGATCTGCATGC 18368 >seq4396 Length=13502 Score = 113 bits (124), Expect = 4e-20 Identities = 166/235 (71%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832 ||| || |||||| | || |||||||||||||| | ||||| ||||| || | ||||| Sbjct 336 TTTGCATTCCTCCACGCAGACGCAACACCAAGTGAAGTGTAGACTCCTTCTGGATGTTAT 277 Query 94833 AATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGAT 94892 | || || ||| |||||| ||||| || || | ||||| | | ||||| | Sbjct 276 AGTCAGCCAAGGTGCGACCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGT 217 Query 94893 CTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGT 94952 | || || || || || ||||| | ||| || ||||||||| | | | ||||| | | Sbjct 216 CCGGTGGGATTCCCTCCTTGTCCTGAATCTTAGCCTTGACGTTGTCAATGGTGTCGGAGC 157 Query 94953 GGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || | ||||| || ||||| || || || || |||||||||||||| Sbjct 156 TCTCAACTTCGAGGGTGATTGTCTTTCCGGTTAGTGTCTTGACAAAGATCTGCAT 102 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 || ||||||||||| | || || || || || | ||| ||||| || ||| | Sbjct 12705 CGTAACACCAAGTGAAGGGTTGACTCTTTCTGAATGTTGTAATCAGCCAAGGTGCGACCA 12646 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||| ||||| || || | ||||| | | ||||| || || || || || || ||| Sbjct 12645 TCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGGATCCCCTCCTTG 12586 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | ||| || ||||||||| | | | ||||| | | || || || | ||||| Sbjct 12585 TCCTGAATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCCACCTCCAAAGTGATA 12526 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || || || || ||||| |||||||| Sbjct 12525 GTCTTCCCGGTCAGTGTCTTAACAAAAATCTGCAT 12491 >seq37186 Length=985 Score = 105 bits (116), Expect = 6e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 94805 TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGT 94864 |||||||| || |||||||| | ||| || || | ||| || |||| ||||| Sbjct 235 TGCAAAGTTGACTCCTTTTGGATGTTGTAGTCAGCGAGAGTCCTGCCGACCTCGAGCTGC 294 Query 94865 TTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTT 94924 || ||| ||||||| || || ||||| || || || || || || ||||| | ||| || Sbjct 295 TTGCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGAATCTTA 354 Query 94925 GCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTA 94984 |||||||| ||| ||||| | | || || || | |||||||| ||||| ||| Sbjct 355 GCCTTGACATTATCGATGGTGTCCGAGCTCTCCACCTCGAGAGTGATGGTCTTTCCGGTA 414 Query 94985 AGAGTTTTCACAAAGATCTGCAT 95007 || || || || ||||||||||| Sbjct 415 AGGGTCTTGACGAAGATCTGCAT 437 >seq25552 Length=2169 Score = 105 bits (116), Expect = 6e-18 Identities = 117/156 (75%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 ||| || |||||||| ||| | ||||| | | |||||||| ||||| ||||||||||| Sbjct 400 ATCTTCGAGCTGTTTACCGGCGAAGATCAGACGCTGCTGATCCGGAGGGATACCTTCTTT 341 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | || || || ||||| | ||| ||||| | | ||||| || | ||||| Sbjct 340 GTCTTGGATCTTGGCTTTGACATTGTCGATGGTGTCGGAGGACTCGACTTCGAGAGTGAT 281 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||| || || || || |||||||| ||||||||||| Sbjct 280 GGTCTTGCCCGTTAGGGTTTTCACGAAGATCTGCAT 245 >seq1045 Length=26565 Score = 102 bits (112), Expect = 7e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 94804 GTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTG 94863 ||| | |||||| ||||| || | ||| || ||| | ||| ||||| ||||| Sbjct 2815 GTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCCTCGAGCTG 2874 Query 94864 TTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTT 94923 ||| ||| | ||||| | | ||||| || ||||| || ||||| ||||| | || || Sbjct 2875 TTTCCCGGCGAAGATCAGCCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTT 2934 Query 94924 TGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGT 94983 ||||||||| | ||| ||||| | | ||||| || | ||||| || || || || Sbjct 2935 GGCCTTGACGTTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATTGTCTTCCCCGT 2994 Query 94984 AAGAGTTTTCACAAAGATCTGCAT 95007 || |||||||| ||||||||||| Sbjct 2995 TAGGGTTTTCACGAAGATCTGCAT 3018 >seq14782 Length=4961 Score = 98.7 bits (108), Expect = 9e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 94779 CTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGC 94838 |||||||||||| || | |||| ||| | ||| || ||||| || | ||| ||||| Sbjct 1967 CTCCTCCTCTCAGACGGAGAACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCCG 2026 Query 94839 TCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898 | || | || |||||||| || ||| | ||||| | | ||||| || || | Sbjct 2027 CGAGGGTCCTTCCGTCTTCCAGCTGCTTCCCGGCGAAGATCAGACGCTGCTGGTCCGGTG 2086 Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958 | || ||||| ||||| | ||| || |||||||| | ||| ||||| | |||| Sbjct 2087 GGATCCCTTCCTTGTCCTGAATCTTGGCCTTGACATTGTCGATCGTGTCGGATGATTCGA 2146 Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || | || || || || || || || |||||||| ||||||||||| Sbjct 2147 CCTCTAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 2195 >seq12662 Length=5898 Score = 93.3 bits (102), Expect = 4e-14 Identities = 153/217 (71%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA- 94851 |||||||||||||| | || || ||||| || | ||| || ||| || || || || Sbjct 3931 CGCAACACCAAGTGAATGGTTGACTCCTTCTGGATGTTGTAGTCGG-CA-AGGGTGCGAC 3874 Query 94852 -ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTT 94910 |||||| ||||| ||||| | ||||| | | ||||| |||||||| || ||||| | Sbjct 3873 CATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGGATGCCTTCCT 3814 Query 94911 TGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGA 94970 | || | || || || || ||| | | ||||| | | || || || | |||| Sbjct 3813 TATCTTGGATCTTGGCTTTCACGTTATCAATCGTGTCCGAGCTCTCAACTTCGAGGGTGA 3754 Query 94971 TGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| || ||||| | || ||||| ||||||||||| Sbjct 3753 TGGTCTTACCAGTCAAGGTCTTCACGAAGATCTGCAT 3717 >seq24793 Length=2311 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 94805 TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGT 94864 |||| |||||| ||||| || | ||| || || || || || || || ||||| Sbjct 1411 TGCAGAGTAGACTCCTTCTGGATGTTGTAGTCCGCCAATGTTCTGCCGTCTTCAAGCTGC 1470 Query 94865 TTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTT 94924 || ||| | ||||| || || ||||| || ||||| ||||| || ||||| | || ||| Sbjct 1471 TTGCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATACCCTCCTTGTCTTGGATCTTT 1530 Query 94925 GCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTA 94984 || |||||| | ||| ||||| | | || || || | || || || ||||| || Sbjct 1531 GCTTTGACGTTGTCGATGGTGTCGGAGCTCTCCACCTCTAGGGTAATCGTCTTTCCCGTC 1590 Query 94985 AGAGTTTTCACAAAGATCTGCAT 95007 | || || || ||||||||||| Sbjct 1591 AAGGTCTTAACGAAGATCTGCAT 1613 Score = 87.8 bits (96), Expect = 2e-12 Identities = 152/218 (70%), Gaps = 6/218 (3%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATC-GCTCATAGTGTTGGA 94851 ||||| |||||||| | ||||| ||||| || | || || || || || || || Sbjct 1171 CGCAAGACCAAGTGAAGTGTAGACTCCTTCTGGATATTGTAGTCAGCG---AGAGTCCGA 1227 Query 94852 --ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCT 94909 |||||| ||||| ||||| | ||||| | | ||||| |||||||| || ||||| Sbjct 1228 CCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGGATCCCTTCC 1287 Query 94910 TTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTG 94969 || || | || || || || ||| | | ||||| | | || || || | ||| Sbjct 1288 TTATCTTGGATCTTGGCTTTCACGTTATCAATCGTGTCCGAGCTCTCAACTTCGAGGGTG 1347 Query 94970 ATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| || ||||| | || ||||||||||||||||| Sbjct 1348 ATGGTCTTACCAGTCAAGGTCTTCACAAAGATCTGCAT 1385 >seq11485 Length=6519 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 94810 AGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCC 94869 ||| || ||||| || | ||| |||||| || ||| || || ||||| || || Sbjct 4675 AGTTGACTCCTTCTGGATGTTGTAATCGGCCAGGGTGCGTCCGTCTTCTAGCTGCTTCCC 4616 Query 94870 GCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTT 94929 | ||||| | || ||||| || ||||| || ||||| ||||| | || |||||||| Sbjct 4615 AGCGAAGATGAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTTGCCTT 4556 Query 94930 GACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGT 94989 ||| | | | |||||| | | ||||| || | |||||||| || || || || || Sbjct 4555 GACATTGTCTATAGTGTCGGAGCTCTCGACCTCGAGAGTGATGGTCTTGCCGGTGAGTGT 4496 Query 94990 TTTCACAAAGATCTGCAT 95007 |||||| || || ||||| Sbjct 4495 TTTCACGAAAATTTGCAT 4478 >seq3667 Length=14967 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 94804 GTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTG 94863 ||| | |||||| ||||| || | ||| || ||| | ||| ||||| ||||| Sbjct 5518 GTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCCTCGAGCTG 5577 Query 94864 TTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTT 94923 ||| ||| | ||||| | | ||||| || ||||| || ||||| ||||| | || || Sbjct 5578 TTTCCCGGCGAAGATCAGCCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTT 5637 Query 94924 TGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGT 94983 || ||||| | ||| ||||| | ||||| || | ||||| || || || || Sbjct 5638 GGCTTTGACATTGTCGATGGTGTCGGAAGATTCGACCTCGAGGGTGATCGTCTTCCCCGT 5697 Query 94984 AAGAGTTTTCACAAAGATCTGCAT 95007 || |||||||| ||||||||||| Sbjct 5698 TAGGGTTTTCACGAAGATCTGCAT 5721 >seq806 Length=29032 Score = 86.0 bits (94), Expect = 6e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 || || ||||| || ||| | ||||| | || ||||| || || || || ||||| ||| Sbjct 18022 TCTTCGAGCTGCTTCCCGGCGAAGATCAGTCGCTGCTGGTCCGGCGGGATCCCTTCCTTG 18081 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || ||||||||| | ||| ||||| | | ||||| || | || || Sbjct 18082 TCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTTATC 18141 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || || |||||||| ||||||||||| Sbjct 18142 GTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 18176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447928465175520