Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raphanus_20raphanistrum_20subsp._20raphanistrum_20[genbank_20GCA_5F0 00769845.1_202014-10-28] 64,732 sequences; 253,833,977 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq24793 102 7e-17 seq20570 102 7e-17 seq7912 102 7e-17 seq964 100 2e-16 seq37186 96.9 3e-15 seq12662 93.3 3e-14 seq1045 91.5 1e-13 seq11485 89.7 4e-13 seq4396 84.2 2e-11 seq3667 82.4 6e-11 >seq24793 Length=2311 Score = 102 bits (112), Expect = 7e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || ||||| || || | |||||| || |||||||| || ||||||||||| ||| Sbjct 1387 CCACCACGGAGCCTGAGAACGAGATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCCGCC 1446 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| || |||| || | || ||||| || | || | || ||| |||||| ||| Sbjct 1447 AATGTTCTGCCGTCTTCAAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGG 1506 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||| ||||| || |||||| || || | | | | |||||| | |||| Sbjct 1507 ATACCCTCCTTGTCTTGGATCTTTGCT--TTGACGTTGTCGATGGTGTCGGAGCTCTCCA 1564 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | ||| || || ||||| |||| || || || || |||||||| Sbjct 1565 CCTCTAGGGTAATCGTCTTTCCCGTCAAGGTCTTAACGAAGATCTGCAT 1613 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || ||||| || || | ||| || || |||||||| || |||||||| || || Sbjct 1615 CCACCACGGAGCCTGAGAACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAATCAGCG 1674 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || || ||||||| | || || || || | ||||||| ||| || ||| || Sbjct 1675 AGAGTCCTGCCGTCCTCGAGCTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGGGGA 1734 Query 16829 ACGCCCTCTTTGTCGGCAATTT--GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | |||||| ||||| ||| | ||| || || | | | | ||||| | ||| Sbjct 1735 ATGCCCTCCTTGTCCTGAATCTTGGCT--TTAACGTTGTCGATGGTGTCTGAGCTTTCCA 1792 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||||| || ||||| || || || || |||||||||||||| Sbjct 1793 CCTCGAGGGTGATTGTCTTTCCCGTGAGAGTCTTAACAAAAATCTGCAT 1841 >seq20570 Length=3172 Score = 102 bits (112), Expect = 7e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || ||||| || || | ||||| || |||||||| || ||||||||||| || Sbjct 64 CCTCCACGAAGCCTGAGGACGAGATGCAAAGTTGACTCCTTCTGGATGTTGTAGTCAGCA 123 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | | ||||| | ||| ||||| ||| | || | || ||| ||||| || Sbjct 124 AGAGTCCTTCCATCCTCGAGTTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGTGGG 183 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||| || || || || || ||| || | | | | ||||||| | |||| Sbjct 184 ATCCCCTCCTTATCCTGGATCTTAGC--CTTAACGTTGTCAATAGTGTCGGAGCTCTCCA 241 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| ||||| || |||||||||| || |||||||| |||||||| Sbjct 242 CCTCCAAAGTGATTGTCTTTCCGGTCAATGTCTTGACAAAGATCTGCAT 290 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || ||||| | || |||| || || || |||||||| || ||||||||||| ||| Sbjct 292 CCACCACGTAGACGCAACACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCC 351 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | |||| | |||||||||| || || || || | ||||||| ||| || ||| ||| Sbjct 352 AAGGTTCTCCCGTCCTCCAACTGCTTTCCTGCGAAGATAAGCCTCTGCTGATCCGGAGGA 411 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | || || ||||| || || || ||| || | | | | ||||| | ||| Sbjct 412 ATCCCTTCCTTGTCCTGGATCTTGGC--CTTAACGTTGTCGATGGTGTCAGAGCTTTCCA 469 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||||| || ||||| || || ||||| || || |||||||| Sbjct 470 CCTCGAGGGTGATTGTCTTTCCTGTGAGAGTTTTCACGAAGATCTGCAT 518 >seq7912 Length=9007 Score = 102 bits (112), Expect = 7e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || |||| || || |||||||||||||| |||||||||||||| Sbjct 6336 CCTCCACGCAGACGCAACACCAAGTGAAGTGTGGACTCCTTTTGGATGTTGTAGTCGGCT 6395 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | ||||| | ||||| || || | || |||| ||| |||||| ||| Sbjct 6396 AAGGTGCGACCATCCTCAAGCTGTTTCCCAGCGAAGATGAGCCTCTGCTGGTCCGGAGGG 6455 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||| ||||| || || || ||| || | | | | |||||| | ||| Sbjct 6456 ATACCCTCCTTGTCTTGGATCTTGGC--CTTGACGTTGTCAATGGTGTCGGAGCTCTCAA 6513 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| || ||||| ||||| |||| || |||||||| |||||||| Sbjct 6514 CCTCCAAAGTAATGGTCTTTCCAGTCAAAGTCTTGACAAAGATCTGCAT 6562 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || ||||| || || | ||| ||||| ||||||||||| ||||||||||| ||| Sbjct 6564 CCACCACGAAGCCTGAGAACGAGATGAAGCGTAGACTCCTTTTGGATGTTGTAGTCTGCC 6623 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| || |||| || | || ||||| || | || |||| ||| || || ||| Sbjct 6624 AATGTTCTGCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGATCGGGAGGG 6683 Query 16829 ACGCCCTCTTTGTCGGCAA--TTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | || || ||||| || || ||| || || | | | | |||||| | ||| Sbjct 6684 ATACCTTCCTTGTCCTGAATCTTGGCT--TTGACGTTGTCGATTGTGTCGGAGCTTTCCA 6741 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | ||||||||| ||||| || || || || || || |||||||| Sbjct 6742 CCTCGAGGGTGATGGTCTTTCCCGTGAGAGTCTTAACGAAGATCTGCAT 6790 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | || |||| || || |||||||||||||| || ||||||||||| Sbjct 6108 CCACCACGAAGACGCAACACCAAGTGAAGTGTGGACTCCTTTTGGATATTGTAGTCGGCT 6167 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | ||||| | || ||||| || | || || ||||| |||||| ||| Sbjct 6168 AAGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 6227 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | || || || || || || || ||| || | | | | ||||| | |||| Sbjct 6228 ATACCTTCCTTATCCTGGATCTTGGC--CTTGACATTGTCAATGGTGTCAGAGCTCTCCA 6285 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| |||||||| || ||||| || || |||||||| |||||||| Sbjct 6286 CCTCCAACGTGATGGTCTTGCCGGTAAGTGTCTTGACAAAGATCTGCAT 6334 >seq964 Length=27231 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || ||||| |||||||| || ||||||||||| || | || | ||||||| || Sbjct 9923 TGAAGCGTCGACTCCTTCTGGATGTTGTAGTCAGCGAGCGTGCGACCATCCTCCAGCTGC 9864 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 || || ||| ||||||||| ||| || ||| ||| | |||||| ||||| || | | Sbjct 9863 TTACCAGCAAAAATAAGCCTCTGCTGATCCGGAGGGATGCCCTCCTTGTCCTGGATCTTC 9804 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 ||| || | | | | ||||||| | ||| |||| |||||||| ||||| ||| Sbjct 9803 GCCTTGACATTGTCAATAGTGTCGGAGCTCTCAACCTCCAGAGTGATGGTCTTTCCCGTC 9744 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 | || ||||| || |||||||| Sbjct 9743 AAAGTCTTGACGAAGATCTGCAT 9721 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/214 (69%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || || | ||||||||| ||||| || || ||||||||||| || | || | ||| Sbjct 10160 AGCACAAGATGCAGCGTAGACTCTTTCTGAATGTTGTAGTCAGCTAGCGTGCGTCCATCC 10101 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 |||| || || || ||| | || |||| ||| |||||| || | |||||||| || Sbjct 10100 TCCAGCTGCTTACCGGCAAAGATGAGCCTCTGCTGGTCCGGTGGGATACCCTCTTTATCC 10041 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || ||| || | | | | ||||| | ||| |||| ||||||| Sbjct 10040 TGGATCTTAGC--CTTGACGTTGTCAATGGTGTCTGAGCTCTCAACCTCCAAAGTGATGG 9983 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| ||||| || || |||||||| || ||||| Sbjct 9982 TTTTACCGGTGAGGGTCTTGACAAAGATTTGCAT 9949 >seq37186 Length=985 Score = 96.9 bits (106), Expect = 3e-15 Identities = 146/206 (71%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 16732 ATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTG 16791 |||||| || |||||||| || ||||||||||| |||| ||| || |||| || | || Sbjct 6 ATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCCGCCAATGTTCTGCCGTCTTCAAGCTG 65 Query 16792 TTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATT 16849 ||||| || | || | || ||| |||||| ||| | ||||| ||||| || || Sbjct 66 CTTGCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATACCCTCCTTGTCTTGGATCTT 125 Query 16850 TGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCG 16909 ||| || || | | | | |||||| | |||| |||| || ||||| || ||| Sbjct 126 AGCT--TTGACATTGTCAATGGTGTCGGAGCTCTCCACCTCCAAAGTAATGGTCTTGCCG 183 Query 16910 GTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| || || || ||||||||||| Sbjct 184 GTCAATGTCTTAACGAAAATCTGCAT 209 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || ||||| || || | ||||| || ||||||||||| ||||||||||| || Sbjct 211 CCACCACGGAGCCTGAGAACGAGATGCAAAGTTGACTCCTTTTGGATGTTGTAGTCAGCG 270 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || || || |||| | || ||||| ||| | || | || ||| |||||| || Sbjct 271 AGAGTCCTGCCGACCTCGAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGG 330 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||||| ||||| ||| | ||| || | | | ||||| | |||| Sbjct 331 ATTCCCTCCTTGTCCTGAATCTTAGCCTTGACATTATCGATGGTGTCCGAGCTCTCCACC 390 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||||||| |||||||| || || ||||| || |||||||| Sbjct 391 TCGAGAGTGATGGTCTTTCCGGTAAGGGTCTTGACGAAGATCTGCAT 437 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/230 (70%), Gaps = 5/230 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCG-TGGACTCCTTTTGTATGTTGTAGTCGGC 16767 || || || ||||| || || | ||| || | | ||||| ||||| ||||||||||| || Sbjct 439 CCACCACGGAGCCTGAGGACAAGATGAAGAGGTCGACTCTTTTTGGATGTTGTAGTCAGC 498 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 || ||| || |||||||||| ||||| || || | ||||||| ||| || || ||| Sbjct 499 CAATGTTCTGCCGTCCTCCAACTGTTTCCCGGCGAAGATAAGCCTCTGCTGATCGGGAGG 558 Query 16828 CACGCCCTCTTTGTCGGCAA--TTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCC 16885 | ||||||||||| || || ||| || || | | | | |||||| | ||| Sbjct 559 GATACCCTCTTTGTCCTGAATCTTGGCT--TTAACGTTGTCGATGGTGTCGGAGCTTTCC 616 Query 16886 GTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||||| || || || || || || || || || || ||||| Sbjct 617 ACCTCGAGGGTGATCGTCTTCCCAGTGAGAGTCTTAACGAAGATTTGCAT 666 >seq12662 Length=5898 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || ||||| || || | |||||| || |||||||| || ||||||||||| || Sbjct 3715 CCACCACGGAGCCTGAGAACGAGATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCAGCG 3656 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| || |||| || | || ||||| || | || | || ||| |||||| || Sbjct 3655 AGAGTTCTGCCGTCTTCAAGCTGCTTGCCTGCGAAGATCAACCTCTGCTGGTCCGGTGGG 3596 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||| ||||| || |||||| || || | | | | |||||| | |||| Sbjct 3595 ATCCCCTCCTTGTCTTGGATCTTTGCT--TTGACGTTGTCGATGGTGTCGGAGCTCTCCA 3538 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | ||| || || ||||| |||| || || || || |||||||| Sbjct 3537 CCTCTAGGGTAATCGTCTTTCCCGTCAAGGTCTTAACGAAGATCTGCAT 3489 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || ||||| || || | ||| || || |||||||| || |||||||| || || Sbjct 3487 CCACCACGGAGCCTGAGAACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAATCAGCG 3428 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || || ||||||| | || || || || | ||||||| ||| || ||| || Sbjct 3427 AGAGTCCTGCCGTCCTCGAGCTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGGGGA 3368 Query 16829 ACGCCCTCTTTGTCGGCAATTT--GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | |||||| ||||| ||| | ||| || || | | | | ||||| | ||| Sbjct 3367 ATGCCCTCCTTGTCCTGAATCTTGGCT--TTAACGTTGTCGATGGTGTCTGAGCTTTCCA 3310 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||||| || ||||| || || || || |||||||||||||| Sbjct 3309 CCTCGAGGGTGATTGTCTTTCCCGTGAGAGTCTTAACAAAAATCTGCAT 3261 >seq1045 Length=26565 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/208 (70%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || |||||||||||||| | ||| ||||||| | ||| Sbjct 2816 TGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCCTCGAGCTGT 2875 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 || || || | || |||||||| |||||| ||| | ||| || ||||| || || Sbjct 2876 TTCCCGGCGAAGATCAGCCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTG 2935 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 || ||| || | | | | |||||| || ||| || | |||||| || || || | Sbjct 2936 GC--CTTGACGTTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATTGTCTTCCCCG 2993 Query 16911 TCAGCGTTTTGACAAAAATCTGCATTTT 16938 | || ||||| || || |||||||| || Sbjct 2994 TTAGGGTTTTCACGAAGATCTGCATCTT 3021 >seq11485 Length=6519 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || || |||||||| || |||||||| || |||| || | ||| Sbjct 5145 AGAACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCAGCCAAAGTCCGACCATCC 5086 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || | ||||| || || | || || | ||| |||||| ||| | ||| || ||||| Sbjct 5085 TCGAGCTGTTTCCCAGCGAAGATGAGTCTCTGCTGGTCCGGAGGGATGCCTTCCTTGTCC 5026 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 ||| | | ||||| | | | | ||||| | |||| ||| | ||| |||||| Sbjct 5025 TGAATCTTCGCTTTCACATTGTCGATCGTGTCAGAGCTCTCCACTTCAAGGGTAATGGTT 4966 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || ||||| || || ||||| ||||||||||| Sbjct 4965 TTACCGGTGAGTGTCTTGACGAAAATCTGCAT 4934 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/214 (69%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || || | ||| ||||| |||||||| || || ||||| || || | || | ||| Sbjct 4917 AGGACGAGATGAAGCGTAGACTCCTTCTGAATATTGTAATCCGCAAGCGTGCGTCCATCC 4858 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 || | ||||| || || | || || | ||| |||||| ||| | || || ||||| Sbjct 4857 TCAAGCTGTTTACCAGCGAAGATGAGTCTCTGCTGGTCCGGAGGAATTCCTTCCTTGTCC 4798 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || |||||| ||||| | | | | ||||||| | ||| |||| ||||||| Sbjct 4797 TGGATCTTTGCT--TTCACATTGTCAATAGTGTCGGAGCTCTCAACCTCCAAAGTGATGG 4740 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | || || |||| || ||||||||||||||||| Sbjct 4739 TCTTGCCTGTCAAAGTCTTGACAAAAATCTGCAT 4706 >seq4396 Length=13502 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 16727 ACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCC 16786 |||| || || || ||||| || || |||||||| || |||| ||| | ||||| Sbjct 12699 ACCAAGTGAAGGGTTGACTCTTTCTGAATGTTGTAATCAGCCAAGGTGCGACCATCCTCA 12640 Query 16787 AATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCA 16846 | || ||||| || | || || ||||| |||||| || | ||||| ||||| | Sbjct 12639 AGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGGATCCCCTCCTTGTCCTGA 12580 Query 16847 ATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTT 16906 || | ||| || | | | | |||||| | |||| |||| ||||| || || Sbjct 12579 ATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCCACCTCCAAAGTGATAGTCTTC 12520 Query 16907 CCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||||||| || || |||||||||||||| Sbjct 12519 CCGGTCAGTGTCTTAACAAAAATCTGCAT 12491 >seq3667 Length=14967 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/208 (69%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || |||||||||||||| | ||| ||||||| | ||| Sbjct 5519 TGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCCTCGAGCTGT 5578 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 || || || | || |||||||| |||||| ||| | ||| || ||||| || || Sbjct 5579 TTCCCGGCGAAGATCAGCCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTG 5638 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 ||| || || | | | | |||||| | || || | |||||| || || || | Sbjct 5639 GCT--TTGACATTGTCGATGGTGTCGGAAGATTCGACCTCGAGGGTGATCGTCTTCCCCG 5696 Query 16911 TCAGCGTTTTGACAAAAATCTGCATTTT 16938 | || ||||| || || |||||||| || Sbjct 5697 TTAGGGTTTTCACGAAGATCTGCATCTT 5724 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404768417468680