Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raphanus_20raphanistrum_20subsp._20raphanistrum_20[genbank_20GCA_5F0 00769845.1_202014-10-28] 64,732 sequences; 253,833,977 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq12321 122 2e-22 seq66 104 5e-17 seq4839 91.5 3e-13 seq338 91.5 3e-13 seq29375 87.8 4e-12 seq16212 87.8 4e-12 seq14504 87.8 4e-12 seq6577 87.8 4e-12 seq3885 87.8 4e-12 seq2818 87.8 4e-12 seq1617 87.8 4e-12 seq1503 87.8 4e-12 seq1284 87.8 4e-12 seq1276 87.8 4e-12 seq1121 87.8 4e-12 seq912 87.8 4e-12 seq842 87.8 4e-12 seq635 87.8 4e-12 seq574 87.8 4e-12 seq318 87.8 4e-12 seq83 87.8 4e-12 seq39 87.8 4e-12 seq21470 86.0 1e-11 seq7507 86.0 1e-11 seq5662 86.0 1e-11 seq3164 86.0 1e-11 seq826 86.0 1e-11 seq194 86.0 1e-11 seq26161 84.2 4e-11 seq5300 84.2 4e-11 seq3099 84.2 4e-11 seq1754 84.2 4e-11 seq589 84.2 4e-11 >seq12321 Length=6064 Score = 122 bits (134), Expect = 2e-22 Identities = 545/850 (64%), Gaps = 19/850 (2%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 || ||||| || | ||| |||| || ||||| | |||||| | || || || || | Sbjct 1654 TCAAAGAAGTTGGTCTTCCCCTGAAGCGAGATCAACTCCATCCAATCAAACGGATTCGCC 1595 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 || |||| ||| | ||||| || | || | | || ||||||||||| | | Sbjct 1594 ACACCGTACACCTTCCCGTACCCAAGCGCGCCCAAAAGCCTATCCGCCACAAACTCGATA 1535 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGA-CAAGGAATTGCCTCACAGAT 251741 ||||| | |||||| ||| ||||| || | || ||| || |||| || || || | Sbjct 1534 TACTGACTCATCAGATCACGATTCATCCCCACCA-ACGCGCACGGAAGCGCGTCGCACAC 1476 Query 251742 GAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGCCAGAGACAG 251801 || ||| | ||| | | || || || ||| || | |||||| | || | || Sbjct 1475 AAACTCCCTCTCGATCTCCACCGCGTCGCACACGATCGACTTCACGCGCTCCTCCGGGAG 1416 Query 251802 CTT-GTTCTCCA---GCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGT 251857 ||| || ||| | | | | || |||| | || ||| | | || || ||||||| Sbjct 1415 CTTCGTCCTCAATAAGGTAT-AGATCAGG--CAGGCGAAATCGCAG-TGAAGCCCCTCGT 1360 Query 251858 CGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCC 251917 | | ||||| ||||||||| | ||| |||||||| | |||||| ||| |||||| Sbjct 1359 CTCTCGAGATGAGCTCGTTGGAGAAGGTCAGACCAGGCATGAGCCCACGCTTCTTGAGCC 1300 Query 251918 AGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACAA 251977 ||||||| | ||| ||| ||| ||||| | | || ||||| || | | || || | Sbjct 1299 AGAAGATCGAGCAGAAGCTTCCGGAGAAGAAGATCCCTTCGACGCAGGCGAAGGCGACGA 1240 Query 251978 GGCGCTCAGCAAACGACTTGTCCTGCGAC-AAGAACTTCTGTGCCCATGCTGCCTTCTTT 252036 | ||| || || | | || | || | | ||||| |||||| |||||||| Sbjct 1239 TCCTCTCCGCGAAAGTC-TGAGATCCGTCGATCCACTTCATGGCCCATTGGGCCTTCTTC 1181 Query 252037 CCAACCGCGGGGATTGTTTCGATTGCATCAAAGAGAGAGTTCCGCTCGGCATCGTCCTCG 252096 | || |||||| || ||||| || ||||| || || ||| | ||| | | Sbjct 1180 GCGACGCAGGGGATGGTCTCGATGGCCCGGAAGAGGTGGTCCCTCTCCTTGTTGTCTTTG 1121 Query 252097 ATGAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGGATGGATTCGTTGAACATCTGG 252156 ||| | || ||||||||| |||||||| || |||||| || | |||||| Sbjct 1120 ATGTAGGTGTCGAGCAGGAGACTATACATCTCTGAGTGGATGTTCTCAATCGCGATCTGG 1061 Query 252157 TAAGCATAGAATAGACGCGCGGAAGGGTCGGTGACTTCCGTGGAAAAGTTGTTTGCAATG 252216 | | ||||| |||||| | | | ||| || | || | || | Sbjct 1060 AAGCCGTAGAAGGCACGCGCCTCGGAGACCTGGACGTCGGACATGAACCGGGAGGCGAGA 1001 Query 252217 TTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCAAGAATGGTCTTGATGAAGTGA 252276 ||||| | || || || ||| | | || |||||| | || | | ||||||||||| Sbjct 1000 TTCTCGAGGACGATCCCGTCGGAGGCGGCGAAGAAGGCCAGGACGTGTTTGATGAAGTGG 941 Query 252277 CGCTCATCGTCGTTGAGCTTGTCACGCCAGTCGGCAATGTCCTGATTCAGAGG--AACTT 252334 ||||| |||||||||| || || ||||||| |||| | ||||| |||| Sbjct 940 CGCTCGCCGTCGTTGAGATTCTC---CCAGTCGCGTGTGTC--GCCGGAGAGGTCGACTT 886 Query 252335 CTTCCACCGTCCAGAATGTGGACACCGCCTTCTTGTACATTGCGAACACATCAGGGTACT 252394 | || | |||||||| | || | |||||||||||||| | | | | ||||| | Sbjct 885 CCTCGGCGGTCCAGAAGGAGGCTTCGGCCTTCTTGTACATCTCCCAGATCTGTGGGTATT 826 Query 252395 TGATTGGGAA 252404 ||||||||| Sbjct 825 GGATTGGGAA 816 >seq66 Length=55029 Score = 104 bits (114), Expect = 5e-17 Identities = 192/280 (69%), Gaps = 4/280 (1%) Strand=Plus/Plus Query 218503 AACATCCCCGTCCCTGACTTCATCGACAAGGAGCTCATTCTTTTCTCGCGGTATGATGTG 218562 || ||| || || ||| ||| | ||||||| || || | ||||| | |||| | Sbjct 2773 AAAATCTCCTTCAGTGATTTCGTAAACAAGGAACTTATCTTATTCTCCATGGCTGATCTT 2832 Query 218563 GAGCGTTCTATTCCCAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTT 218622 | | || ||||| | |||| ||||| ||||| || ||| | ||||| || ||| Sbjct 2833 CAAAGGTCAATTCCTTCCATGGTTGATGGGCTCAAACCCGGCCAGAGAAAGATACTTTTT 2892 Query 218623 GCCGCATTCAAGCGGAACCTGGTTCAAGAAATT--AAGGTCGCTCAGTTTTCTGGTTATG 218680 | || ||| |||| | |||| | ||||| || || || |||||||||| Sbjct 2893 TGTTCGTTTAAGAGGAATTTCA--CAAGGGAGGCCAAGGTTGCCCAATTCTCTGGTTATG 2950 Query 218681 TATCCGAAATTTCTGGCTACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCA 218740 |||| || || | ||||||||||| ||||||||||| ||| | || | || | Sbjct 2951 TATCAGAGCACTCGGCATACCATCACGGCGAGCAGAGTCTTGCCGGTACGATCATTGGTA 3010 Query 218741 TGGCACAGGACTATGTGGGCAGTAACAACATGAACTTGCT 218780 |||||||||| ||||| ||||| |||||||| ||| |||| Sbjct 3011 TGGCACAGGATTATGTAGGCAGCAACAACATAAACCTGCT 3050 >seq4839 Length=12761 Score = 91.5 bits (100), Expect = 3e-13 Identities = 62/70 (89%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 142499 AGATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTT 142558 ||| |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||| Sbjct 3882 AGAAAGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTT 3941 Query 142559 CGAGCCCCAC 142568 |||||||||| Sbjct 3942 CGAGCCCCAC 3951 >seq338 Length=38006 Score = 91.5 bits (100), Expect = 3e-13 Identities = 61/68 (90%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560 |||||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||| Sbjct 25268 ATAGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCG 25209 Query 142561 AGCCCCAC 142568 |||||||| Sbjct 25208 AGCCCCAC 25201 >seq29375 Length=1616 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 1023 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 1082 Query 142563 CCCCAC 142568 |||||| Sbjct 1083 CCCCAC 1088 >seq16212 Length=4437 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 1587 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 1646 Query 142563 CCCCAC 142568 |||||| Sbjct 1647 CCCCAC 1652 >seq14504 Length=5069 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 4547 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 4488 Query 142563 CCCCAC 142568 |||||| Sbjct 4487 CCCCAC 4482 >seq6577 Length=10347 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 5512 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 5571 Query 142563 CCCCAC 142568 |||||| Sbjct 5572 CCCCAC 5577 >seq3885 Length=14498 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 11292 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 11351 Query 142563 CCCCAC 142568 |||||| Sbjct 11352 CCCCAC 11357 >seq2818 Length=17315 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 16268 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 16209 Query 142563 CCCCAC 142568 |||||| Sbjct 16208 CCCCAC 16203 >seq1617 Length=22241 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 3143 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 3084 Query 142563 CCCCAC 142568 |||||| Sbjct 3083 CCCCAC 3078 >seq1503 Length=22867 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 16554 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 16613 Query 142563 CCCCAC 142568 |||||| Sbjct 16614 CCCCAC 16619 >seq1284 Length=24489 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 22613 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 22554 Query 142563 CCCCAC 142568 |||||| Sbjct 22553 CCCCAC 22548 >seq1276 Length=24579 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 12288 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 12347 Query 142563 CCCCAC 142568 |||||| Sbjct 12348 CCCCAC 12353 >seq1121 Length=25735 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 14358 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 14417 Query 142563 CCCCAC 142568 |||||| Sbjct 14418 CCCCAC 14423 >seq912 Length=27731 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 5861 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 5802 Query 142563 CCCCAC 142568 |||||| Sbjct 5801 CCCCAC 5796 >seq842 Length=28596 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 20321 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 20380 Query 142563 CCCCAC 142568 |||||| Sbjct 20381 CCCCAC 20386 >seq635 Length=31415 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 25061 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 25120 Query 142563 CCCCAC 142568 |||||| Sbjct 25121 CCCCAC 25126 >seq574 Length=32415 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 20270 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 20329 Query 142563 CCCCAC 142568 |||||| Sbjct 20330 CCCCAC 20335 >seq318 Length=38567 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 5935 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 5876 Query 142563 CCCCAC 142568 |||||| Sbjct 5875 CCCCAC 5870 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 22848 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 22907 Query 142563 CCCCAC 142568 |||||| Sbjct 22908 CCCCAC 22913 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 23976 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 24035 Query 142563 CCCCAC 142568 |||||| Sbjct 24036 CCCCAC 24041 >seq83 Length=52653 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 1342 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 1401 Query 142563 CCCCAC 142568 |||||| Sbjct 1402 CCCCAC 1407 >seq39 Length=59417 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 49896 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 49955 Query 142563 CCCCAC 142568 |||||| Sbjct 49956 CCCCAC 49961 >seq21470 Length=2964 Score = 86.0 bits (94), Expect = 1e-11 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||| ||||||||| |||||||||| || ||||||| || |||||||||||||||||| Sbjct 936 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 995 Query 142564 CCCAC 142568 ||||| Sbjct 996 CCCAC 1000 >seq7507 Length=9369 Score = 86.0 bits (94), Expect = 1e-11 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||| ||||||||| |||||||||| || ||||||| || |||||||||||||||||| Sbjct 4789 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 4730 Query 142564 CCCAC 142568 ||||| Sbjct 4729 CCCAC 4725 >seq5662 Length=11518 Score = 86.0 bits (94), Expect = 1e-11 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||| ||||||||| |||||||||| || ||||||| || |||||||||||||||||| Sbjct 5704 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 5645 Query 142564 CCCAC 142568 ||||| Sbjct 5644 CCCAC 5640 >seq3164 Length=16327 Score = 86.0 bits (94), Expect = 1e-11 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||| ||||||||| |||||||||| || ||||||| || |||||||||||||||||| Sbjct 2141 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 2200 Query 142564 CCCAC 142568 ||||| Sbjct 2201 CCCAC 2205 >seq826 Length=28838 Score = 86.0 bits (94), Expect = 1e-11 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 26920 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 26979 Query 142563 CCCCA 142567 ||||| Sbjct 26980 CCCCA 26984 >seq194 Length=43780 Score = 86.0 bits (94), Expect = 1e-11 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||| ||||||||| |||||||||| || ||||||| || |||||||||||||||||| Sbjct 15543 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 15602 Query 142564 CCCAC 142568 ||||| Sbjct 15603 CCCAC 15607 >seq26161 Length=2059 Score = 84.2 bits (92), Expect = 4e-11 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 1236 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 1177 Query 142563 CCCCAC 142568 ||||| Sbjct 1176 TCCCAC 1171 >seq5300 Length=12053 Score = 84.2 bits (92), Expect = 4e-11 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || |||||||||||||||| Sbjct 2067 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAA 2126 Query 142563 CCCCAC 142568 |||||| Sbjct 2127 CCCCAC 2132 >seq3099 Length=16494 Score = 84.2 bits (92), Expect = 4e-11 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 5206 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 5147 Query 142563 CCCCAC 142568 ||||| Sbjct 5146 ACCCAC 5141 >seq1754 Length=21538 Score = 84.2 bits (92), Expect = 4e-11 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 20491 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 20550 Query 142563 CCCCAC 142568 ||||| Sbjct 20551 TCCCAC 20556 >seq589 Length=32226 Score = 84.2 bits (92), Expect = 4e-11 Identities = 63/73 (86%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| | |||||||| || ||||||| || ||||||||||||||||| Sbjct 20609 AGCCCGTCTAGCTCAGTTG-TAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 20667 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 20668 CCCCACGTTGGGC 20680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1026984333999612