Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Raphanus_20raphanistrum_20subsp._20raphanistrum_20[genbank_20GCA_5F0
00769845.1_202014-10-28] 64,732 sequences; 253,833,977 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq11485 136 3e-27
seq4396 132 4e-26
seq1703 127 2e-24
seq25552 122 7e-23
seq7912 116 3e-21
seq7348 114 1e-20
seq964 111 1e-19
seq12662 107 2e-18
seq3667 107 2e-18
seq2054 104 2e-17
seq24793 98.7 8e-16
seq1045 98.7 8e-16
seq526 91.5 1e-13
seq37186 86.0 5e-12
seq20570 86.0 5e-12
>seq11485
Length=6519
Score = 136 bits (150), Expect = 3e-27
Identities = 168/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | | || | ||| | |||||| || || ||||| ||||||||
Sbjct 4935 ATACCACCACGGAGACGGAGGACGAGATGAAGCGTAGACTCCTTCTGAATATTGTAATCC 4876
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| || || ||| ||||| |||||||||||| ||||||| | ||| |||||||||
Sbjct 4875 GCAAGCGTGCGTCCATCCTCAAGCTGTTTACCAGCGAAGATGAGTCTCTGCTGGTCCGGA 4816
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||| ||||| ||||| |||||| ||| | | |||| ||||||| | ||
Sbjct 4815 GGAATTCCTTCCTTGTCCTGGATCTTTGCTTTCACATTGTCAATAGTGTCGGAGCTCTCA 4756
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| || | || ||||| |||| ||| || ||||||||||||||
Sbjct 4755 ACCTCCAAAGTGATGGTCTTGCCTGTCAAAGTCTTGACAAAAATCTGCAT 4706
Score = 122 bits (134), Expect = 7e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215
|| ||||| || | | ||| || || | ||||| || || || ||||||||||| |
Sbjct 5160 CCACCACGAAGACGAAGAACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCAGCC 5101
Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275
| ||| ||| ||| || || ||||| |||||| ||||||| | ||| |||||||||||
Sbjct 5100 AAAGTCCGACCATCCTCGAGCTGTTTCCCAGCGAAGATGAGTCTCTGCTGGTCCGGAGGG 5041
Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335
|||||||| ||||| |||||| ||| | | || | ||||| | | || ||
Sbjct 5040 ATGCCTTCCTTGTCCTGAATCTTCGCTTTCACATTGTCGATCGTGTCAGAGCTCTCCACT 4981
Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| | ||| | ||||| ||||| || || || || |||||||||||
Sbjct 4980 TCAAGGGTAATGGTTTTACCGGTGAGTGTCTTGACGAAAATCTGCAT 4934
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | | || | ||| | || || || || || ||||||||||||
Sbjct 4707 ATACCACCACGGAGACGAAGTACGAGATGGAGAGTTGACTCCTTCTGGATGTTGTAATCG 4648
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| || || ||||| || || || |||||| ||||||| | ||| ||||| |||
Sbjct 4647 GCCAGGGTGCGTCCGTCTTCTAGCTGCTTCCCAGCGAAGATGAGCCTCTGCTGGTCGGGA 4588
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| |||||||| ||||| |||||| || | | || | ||||||| | |||
Sbjct 4587 GGGATGCCTTCCTTGTCCTGGATCTTTGCCTTGACATTGTCTATAGTGTCGGAGCTCTCG 4528
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | || | || |||||||| || ||||| || ||||| |||||
Sbjct 4527 ACCTCGAGAGTGATGGTCTTGCCGGTGAGTGTTTTCACGAAAATTTGCAT 4478
>seq4396
Length=13502
Score = 132 bits (146), Expect = 4e-26
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214
||| ||||| || | || || || || | || || ||||| ||||||||||||||
Sbjct 12718 ACCACCACGCAGACGTAACACCAAGTGAAGGGTTGACTCTTTCTGAATGTTGTAATCAGC 12659
Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274
|| || ||| ||| ||||| || || |||||| ||||||||||||| |||||||| ||
Sbjct 12658 CAAGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGTGG 12599
Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334
|| || || ||||| |||||| || | | |||| |||||||| | || ||
Sbjct 12598 GATCCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCCAC 12539
Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|||| || | || || |||||||| || || ||||||||||||||
Sbjct 12538 CTCCAAAGTGATAGTCTTCCCGGTCAGTGTCTTAACAAAAATCTGCAT 12491
Score = 125 bits (138), Expect = 6e-24
Identities = 165/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 114154 TACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGC 114213
|||| ||||| || || | || | ||| | || || |||||||| |||||||| ||
Sbjct 12059 TACCACCACGGAGCCTGAGGACAAGATGAAGGGTCGACTCTTTTTGGATGTTGTAGTCAG 12000
Query 114214 TCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAG 114273
| |||||| |||||||||||| || || ||| |||| || | ||| || ||||| |
Sbjct 11999 CGAGAGTACGCCCATCTTCAAGTTGCTTCCCGGCGAAGATAAGCCTCTGCTGATCCGGGG 11940
Query 114274 GAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGA 114333
|||||||||| ||||| |||||| ||| | | || | |||||| | | ||| |
Sbjct 11939 GAATGCCTTCCTTGTCCTGAATCTTGGCTTTAACGTTGTCGATGGTGTCTGAGCTTTCCA 11880
Query 114334 CGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
| || | ||| | ||| || ||||| ||||| || || || ||||||||
Sbjct 11879 CCTCGAGGGTGATCGTCTTTCCGGTGAGAGTCTTAACGAATATCTGCAT 11831
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| || ||||| || | ||| || || || | ||||| || || || ||||| || ||
Sbjct 331 ATTCCTCCACGCAGACGCAACACCAAGTGAAGTGTAGACTCCTTCTGGATGTTATAGTCA 272
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| || ||| ||| || || || || |||||| ||||||||||||| ||||||||
Sbjct 271 GCCAAGGTGCGACCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGT 212
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || || || ||||| |||||| || | | |||| |||||||| | ||
Sbjct 211 GGGATTCCCTCCTTGTCCTGAATCTTAGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCA 152
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | ||| | || || ||||| || || || ||||| ||||||||
Sbjct 151 ACTTCGAGGGTGATTGTCTTTCCGGTTAGTGTCTTGACAAAGATCTGCAT 102
>seq1703
Length=21771
Score = 127 bits (140), Expect = 2e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| || |||||||| | ||| || || || | |||||| || || || || |||||||||
Sbjct 18821 ATGCCTCCACGTAGACGCAAGACCAAGTGAAGCGTAGACTCCTTCTGGATATTGTAATCG 18880
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| || ||| ||| || || || || || ||| ||||||||||||| || ||||||
Sbjct 18881 GCCAAGGTGCGACCATCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGA 18940
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || ||||| ||||| ||||| ||| | | || | |||||||| | |||
Sbjct 18941 GGGATCCCTTCCTTGTCCTGGATCTTGGCTTTCACGTTGTCGATGGTGTCGGAGCTTTCC 19000
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | ||| | || || ||||| |||||||| || || || |||||
Sbjct 19001 ACCTCGAGGGTGATTGTCTTCCCGGTGAGAGTTTTCACGAAGATTTGCAT 19050
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | | || || || | || || || || || || ||||| ||
Sbjct 17909 ATACCACCACGGAGACGGAGGACCAAGTGAAGAGTCGACTCCTTCTGGATATTGTAGTCT 17968
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| || ||| ||| || || || || |||||| ||||||||||||| || ||||||
Sbjct 17969 GCCAAGGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCCGGA 18028
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || ||||| ||||| ||||| || | | |||| ||||| | | ||
Sbjct 18029 GGGATACCTTCCTTGTCCTGGATCTTAGCCTTCACGTTGTCAATAGTGTCAGAGCTCTCA 18088
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383
|| |||| || | || || ||||| ||||| || ||||| |||||||||
Sbjct 18089 ACCTCCAATGTGATAGTCTTCCCGGTAAGAGTCTTGACAAAGATCTGCATG 18139
Score = 93.3 bits (102), Expect = 4e-14
Identities = 161/234 (69%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| || ||||| || | || || || || | || || ||||| ||||||||||||||
Sbjct 18137 ATGCCACCACGGAGACGTAACACCAAGTGAAGGGTCGACTCTTTCTGAATGTTGTAATCA 18196
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| || ||| ||| || || || || |||||| | || || | ||| |||||||||
Sbjct 18197 GCCAAGGTGCGACCATCCTCGAGCTGCTTCCCAGCGAATATCAGCCTCTGCTGGTCCGGA 18256
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || || |||||||| || || ||| | | |||| |||||||| ||
Sbjct 18257 GGGATACCCTCTTTGTCTTGGATTTTCGCTTTCACGTTGTCAATGGTGTCGGAACTCTCC 18316
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 114386
|| || | || | ||| || || |||| || || || || ||||||||| ||
Sbjct 18317 ACCTCTAAAGTGATCGTCTTTCCTGTCAACGTCTTAACGAAGATCTGCATGCCT 18370
>seq25552
Length=2169
Score = 122 bits (134), Expect = 7e-23
Identities = 141/190 (74%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 114193 CTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGA 114252
|||| || |||||||| || || |||||| |||||| || |||||||| ||| |||
Sbjct 434 CTTTCTGGATGTTGTAGTCAGCCAAAGTACGGCCATCTTCGAGCTGTTTACCGGCGAAGA 375
Query 114253 TGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTT 114312
| |||||||| || |||||||| || ||||||||||| ||||| ||| | | |
Sbjct 374 TCAGACGCTGCTGATCCGGAGGGATACCTTCTTTGTCTTGGATCTTGGCTTTGACATTGT 315
Query 114313 CAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 114372
| | |||||||| ||| ||||| || | || | || ||||| || || ||||| || |
Sbjct 314 CGATGGTGTCGGAGGACTCGACTTCGAGAGTGATGGTCTTGCCCGTTAGGGTTTTCACGA 255
Query 114373 AAATCTGCAT 114382
| ||||||||
Sbjct 254 AGATCTGCAT 245
>seq7912
Length=9007
Score = 116 bits (128), Expect = 3e-21
Identities = 165/232 (71%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214
||| ||||| || | ||| || || || | || || || ||||| || ||||| |||
Sbjct 6107 ACCACCACGAAGACGCAACACCAAGTGAAGTGTGGACTCCTTTTGGATATTGTAGTCGGC 6166
Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274
| || ||| ||| ||||| || || |||||| ||||||||||||| |||||||||||
Sbjct 6167 TAAGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGG 6226
Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334
|| ||||| || || ||||| || | | |||| |||||| | | || ||
Sbjct 6227 GATACCTTCCTTATCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCAGAGCTCTCCAC 6286
Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 114386
|||| || | || |||||||| || || || ||||| ||||||||| ||
Sbjct 6287 CTCCAACGTGATGGTCTTGCCGGTAAGTGTCTTGACAAAGATCTGCATGCCT 6338
Score = 114 bits (126), Expect = 1e-20
Identities = 164/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| || ||||| || | ||| || || || | || || || ||||| |||||||| |||
Sbjct 6333 ATGCCTCCACGCAGACGCAACACCAAGTGAAGTGTGGACTCCTTTTGGATGTTGTAGTCG 6392
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| || ||| ||| ||||| ||||| |||||| ||||||| | ||| |||||||||
Sbjct 6393 GCTAAGGTGCGACCATCCTCAAGCTGTTTCCCAGCGAAGATGAGCCTCTGCTGGTCCGGA 6452
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || || || ||||| ||||| || | | |||| |||||||| | ||
Sbjct 6453 GGGATACCCTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCA 6512
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383
|| |||| || | || || || |||| ||| || ||||| |||||||||
Sbjct 6513 ACCTCCAAAGTAATGGTCTTTCCAGTCAAAGTCTTGACAAAGATCTGCATG 6563
>seq7348
Length=9517
Score = 114 bits (126), Expect = 1e-20
Identities = 161/226 (71%), Gaps = 0/226 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || || | || || || | || || || || || |||||||| |||
Sbjct 226 ATACCACCACGAAGCCTGAGCACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCG 167
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| ||| ||| ||| || || || || |||||| ||||||||||||| |||||||||
Sbjct 166 GCAAGAGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGA 107
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || ||||| ||||| ||||| || | | |||| |||||||| | ||
Sbjct 106 GGGATACCTTCCTTGTCCTGGATCTTAGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCA 47
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCT 114378
|| |||| || | || |||||||| ||||| || || || ||||
Sbjct 46 ACTTCCAATGTGATGGTCTTGCCGGTAAGAGTCTTCACGAAGATCT 1
Score = 95.1 bits (104), Expect = 1e-14
Identities = 161/231 (70%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATC- 114211
||||| ||||| || | | | || || | || || || || || |||||||| ||
Sbjct 454 ATACCACCACGGAGACGGAGGGCCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCT 395
Query 114212 GCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGG 114271
||| | || ||| ||| ||||| || || |||||| ||||||||||||| || |||||
Sbjct 394 GCTAAG-GTGCGACCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCCGG 336
Query 114272 AGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTC 114331
||| |||||||| ||||| ||||| |||| | |||| |||||| | | ||
Sbjct 335 AGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTGTCAATGGTGTCAGAGCTCTC 276
Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | || | || || || |||| || || || || ||||||||
Sbjct 275 CACCTCAAGTGTGATGGTCTTACCAGTCAAGGTCTTCACGAATATCTGCAT 225
>seq964
Length=27231
Score = 111 bits (122), Expect = 1e-19
Identities = 163/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | ||| || | || | || || || || || || ||||||||
Sbjct 10406 ATACCACCACGGAGACGCAACACAAGGTGAAGGGTCGACTCCTTCTGGATATTGTAATCT 10347
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| |||||| ||| ||||| ||||| |||||| ||||||| | ||| ||||||||
Sbjct 10346 GCAAGCGTACGACCATCCTCAAGCTGTTTCCCAGCGAAGATGAGTCTCTGCTGGTCCGGT 10287
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || ||||| ||||| |||||| || | | || | ||||| | | ||
Sbjct 10286 GGGATCCCTTCCTTGTCCTGAATCTTAGCCTTGACGTTATCGATCGTGTCAGAGCTCTCC 10227
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383
|| |||| || | |||||||| || || || || |||||||||||||||
Sbjct 10226 ACCTCCAAAGTGATGGTTTTGCCAGTGAGGGTCTTCACAAAAATCTGCATG 10176
Score = 109 bits (120), Expect = 5e-19
Identities = 150/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 114173 AACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTC 114232
||| | ||| | || || || || || || ||||||||| || ||||| ||| ||
Sbjct 9702 AACGAGATGGAGAGTCGACTCCTTCTGGATATTGTAATCGGCCAAGGTACGTCCATCCTC 9643
Query 114233 AAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGC 114292
|| |||||||| ||| ||||||| | ||| |||||||||||||| ||||| |||||
Sbjct 9642 GAGCTGTTTACCGGCGAAGATGAGCCTCTGCTGGTCCGGAGGAATACCTTCCTTGTCCTG 9583
Query 114293 AATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTT 114352
||||| || | | || | ||| |||| | ||||| || | || | || ||
Sbjct 9582 GATCTTAGCCTTGACGTTATCGATGGTATCGGAGCTCTCGACTTCGAGAGTGATGGTCTT 9523
Query 114353 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|||||| |||||||| || ||||| |||||
Sbjct 9522 GCCGGTGAGAGTTTTCACGAAAATTTGCAT 9493
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215
|| ||||| || | | ||| || || | ||| || || || || || ||||| ||
Sbjct 10631 CCACCACGAAGACGAAGAACCAAGTGAAGCGTCGACTCCTTCTGGATATTGTAGTCAGCA 10572
Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275
| || ||| ||| ||||| || ||||||||| ||||||| | |||||||||||||||
Sbjct 10571 AGCGTGCGACCATCCTCAAGCTGCTTACCAGCGAAGATGAGTCTCTGTTGGTCCGGAGGG 10512
Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335
|| ||||| ||||| ||| || || | | || | ||||| | | || ||
Sbjct 10511 ATCCCTTCCTTGTCCTGAATTTTAGCCTTCACATTGTCGATTGTGTCTGAGCTCTCAACT 10452
Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|||| ||| | || ||||| |||||||| || ||||| || |||||
Sbjct 10451 TCCAAGGTAATAGTCTTGCCTGTCAGAGTCTTCACAAAGATTTGCAT 10405
Score = 87.8 bits (96), Expect = 2e-12
Identities = 144/205 (70%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 114179 ATGTATCGTAGATTCTTTTTGAATGTTGTAATC-GCTCATAGTACGAGAATCTTCAAGTT 114237
||| | |||||| ||||| ||||||||||| || ||| | || || ||| || || |
Sbjct 10152 ATGCAGCGTAGACTCTTTCTGAATGTTGTAGTCAGCT-AGCGTGCGTCCATCCTCCAGCT 10094
Query 114238 GTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCT 114297
| ||||| || ||||||| | ||| |||||||| || || || ||||| || ||||
Sbjct 10093 GCTTACCGGCAAAGATGAGCCTCTGCTGGTCCGGTGGGATACCCTCTTTATCCTGGATCT 10034
Query 114298 TTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGG 114357
| || | | |||| |||||| | | || || |||| || | ||||| ||||
Sbjct 10033 TAGCCTTGACGTTGTCAATGGTGTCTGAGCTCTCAACCTCCAAAGTGATGGTTTTACCGG 9974
Query 114358 TCAGAGTTTTTACAAAAATCTGCAT 114382
| || || || ||||| || |||||
Sbjct 9973 TGAGGGTCTTGACAAAGATTTGCAT 9949
>seq12662
Length=5898
Score = 107 bits (118), Expect = 2e-18
Identities = 163/232 (70%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 114151 AAATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAAT 114210
||| ||| ||||| || | ||| || || || || || || || || || |||||||| |
Sbjct 3948 AAAAACCACCACGGAGACGCAACACCAAGTGAATGGTTGACTCCTTCTGGATGTTGTAGT 3889
Query 114211 CGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCG 114270
|| | || ||| ||| ||||| || || |||||| ||||||||||||| ||||| |
Sbjct 3888 CGGCAAGGGTGCGACCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTG 3829
Query 114271 GAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATT 114330
|||| |||||||| || || ||||| ||| | | |||| ||||| | | |
Sbjct 3828 GAGGGATGCCTTCCTTATCTTGGATCTTGGCTTTCACGTTATCAATCGTGTCCGAGCTCT 3769
Query 114331 CGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
| || || | ||| | || || || |||| || || || || ||||||||
Sbjct 3768 CAACTTCGAGGGTGATGGTCTTACCAGTCAAGGTCTTCACGAAGATCTGCAT 3717
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || || | ||| | ||| | || || || || || |||||||||||
Sbjct 3490 ATACCACCACGGAGCCTGAGAACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAATCA 3431
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| ||| | || || || || || || ||| |||| || | ||| || |||||
Sbjct 3430 GCGAGAGTCCTGCCGTCCTCGAGCTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGG 3371
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|||||||| || ||||| |||||| ||| | | || | |||||| | | |||
Sbjct 3370 GGAATGCCCTCCTTGTCCTGAATCTTGGCTTTAACGTTGTCGATGGTGTCTGAGCTTTCC 3311
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | ||| | || || || || ||||| || ||||||||||||||
Sbjct 3310 ACCTCGAGGGTGATTGTCTTTCCCGTGAGAGTCTTAACAAAAATCTGCAT 3261
>seq3667
Length=14967
Score = 107 bits (118), Expect = 2e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
||||| || || || |||||||| ||| | || || || || || ||||| ||
Sbjct 5525 GTAGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCCTCGAGCTGTTTCCCG 5584
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
||| |||| || ||||| ||||||||||| |||||||| ||||| ||||| |||
Sbjct 5585 GCGAAGATCAGCCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCTTTG 5644
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | || | |||||||| |||||||| || | ||| | ||| || || || || |||
Sbjct 5645 ACATTGTCGATGGTGTCGGAAGATTCGACCTCGAGGGTGATCGTCTTCCCCGTTAGGGTT 5704
Query 114366 TTTACAAAAATCTGCAT 114382
|| || || ||||||||
Sbjct 5705 TTCACGAAGATCTGCAT 5721
>seq2054
Length=20018
Score = 104 bits (114), Expect = 2e-17
Identities = 137/190 (72%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 114193 CTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGA 114252
|||| || |||||||| || || |||||| |||||| || |||||||| ||| |||
Sbjct 3204 CTTTCTGGATGTTGTAGTCAGCCAAAGTACGGCCATCTTCGAGCTGTTTACCGGCGAAGA 3263
Query 114253 TGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTT 114312
| | | ||| || || ||||| || ||||||||||| ||||| || | | |
Sbjct 3264 TCAATCTCTGCTGATCTGGAGGGATACCTTCTTTGTCTTGGATCTTGGCCTTGACATTGT 3323
Query 114313 CAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 114372
| | |||||||| ||| ||||| || | ||| | || || ||||| || ||||| || |
Sbjct 3324 CGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTTCCGGTTAGGGTTTTCACGA 3383
Query 114373 AAATCTGCAT 114382
| ||||||||
Sbjct 3384 AGATCTGCAT 3393
>seq24793
Length=2311
Score = 98.7 bits (108), Expect = 8e-16
Identities = 161/232 (69%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 114151 AAATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAAT 114210
||| ||| ||||| || | ||| || || || | ||||| || || || || ||||| |
Sbjct 1154 AAAAACCACCACGCAGACGCAAGACCAAGTGAAGTGTAGACTCCTTCTGGATATTGTAGT 1213
Query 114211 CGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCG 114270
| | ||| ||| ||| || || || || |||||| ||||||||||||| ||||| |
Sbjct 1214 CAGCGAGAGTCCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTG 1273
Query 114271 GAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATT 114330
|||| || ||||| || || ||||| ||| | | |||| ||||| | | |
Sbjct 1274 GAGGGATCCCTTCCTTATCTTGGATCTTGGCTTTCACGTTATCAATCGTGTCCGAGCTCT 1333
Query 114331 CGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
| || || | ||| | || || || |||| || || ||||| ||||||||
Sbjct 1334 CAACTTCGAGGGTGATGGTCTTACCAGTCAAGGTCTTCACAAAGATCTGCAT 1385
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || || | ||| | ||| | || || || || || |||||||||||
Sbjct 1612 ATACCACCACGGAGCCTGAGAACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAATCA 1671
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| ||| | || || || || || || ||| |||| || | ||| || |||||
Sbjct 1672 GCGAGAGTCCTGCCGTCCTCGAGCTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGG 1731
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|||||||| || ||||| |||||| ||| | | || | |||||| | | |||
Sbjct 1732 GGAATGCCCTCCTTGTCCTGAATCTTGGCTTTAACGTTGTCGATGGTGTCTGAGCTTTCC 1791
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | ||| | || || || || ||||| || ||||||||||||||
Sbjct 1792 ACCTCGAGGGTGATTGTCTTTCCCGTGAGAGTCTTAACAAAAATCTGCAT 1841
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || || | ||| | ||| | ||||| || || || |||||||| ||
Sbjct 1384 ATACCACCACGGAGCCTGAGAACGAGATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCC 1443
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| || | |||||||| || || || ||| |||| | | ||| |||||||||
Sbjct 1444 GCCAATGTTCTGCCGTCTTCAAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCCGGA 1503
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || || || ||||| |||||| ||| | | || | |||||||| | ||
Sbjct 1504 GGGATACCCTCCTTGTCTTGGATCTTTGCTTTGACGTTGTCGATGGTGTCGGAGCTCTCC 1563
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | ||| | ||| || || |||| || || || || ||||||||
Sbjct 1564 ACCTCTAGGGTAATCGTCTTTCCCGTCAAGGTCTTAACGAAGATCTGCAT 1613
>seq1045
Length=26565
Score = 98.7 bits (108), Expect = 8e-16
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
||||| || || || |||||||| ||| | || || || || || ||||| ||
Sbjct 2822 GTAGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCCTCGAGCTGTTTCCCG 2881
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
||| |||| || ||||| ||||||||||| |||||||| ||||| ||||| ||
Sbjct 2882 GCGAAGATCAGCCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTG 2941
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | || | |||||||| ||| ||||| || | ||| | || || || || || |||
Sbjct 2942 ACGTTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATTGTCTTCCCCGTTAGGGTT 3001
Query 114366 TTTACAAAAATCTGCAT 114382
|| || || ||||||||
Sbjct 3002 TTCACGAAGATCTGCAT 3018
>seq526
Length=33339
Score = 91.5 bits (100), Expect = 1e-13
Identities = 95/125 (76%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 114165 AGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGA 114224
|| ||||| || | ||| | ||||| ||||| || |||||||||||| | || ||
Sbjct 23191 AGCCTCAAGACGAGATGGAGAGTAGACTCTTTCTGGATGTTGTAATCGGCTAGGGTTCGG 23132
Query 114225 GAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCT 114284
|||||||| || ||||| ||| ||||||| | ||||||||||| || || ||||||
Sbjct 23131 CCGTCTTCAAGCTGCTTACCGGCGAAGATGAGCCTTTGTTGGTCCGGTGGTATACCTTCT 23072
Query 114285 TTGTC 114289
|||||
Sbjct 23071 TTGTC 23067
>seq37186
Length=985
Score = 86.0 bits (94), Expect = 5e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
||||| || || || |||||||| || || || | |||||||| || || ||
Sbjct 13 GTAGACTCCTTCTGGATGTTGTAGTCCGCCAATGTTCTGCCGTCTTCAAGCTGCTTGCCG 72
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
||| |||| | | ||| ||||||||||| || || || ||||| ||||| |||
Sbjct 73 GCGAAGATCAACCTCTGCTGGTCCGGAGGGATACCCTCCTTGTCTTGGATCTTAGCTTTG 132
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | |||| |||||||| | || || |||| || | || |||||||||| ||
Sbjct 133 ACATTGTCAATGGTGTCGGAGCTCTCCACCTCCAAAGTAATGGTCTTGCCGGTCAATGTC 192
Query 114366 TTTACAAAAATCTGCAT 114382
|| || |||||||||||
Sbjct 193 TTAACGAAAATCTGCAT 209
>seq20570
Length=3172
Score = 86.0 bits (94), Expect = 5e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| |||||||| | ||| || || || | ||||| || || || |||||||| ||
Sbjct 289 ATACCACCACGTAGACGCAACACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCA 348
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| || | || || | || || || ||| |||| || | ||| || ||||||
Sbjct 349 GCCAAGGTTCTCCCGTCCTCCAACTGCTTTCCTGCGAAGATAAGCCTCTGCTGATCCGGA 408
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||| ||||| ||||| ||||| || | | || | |||||| | | |||
Sbjct 409 GGAATCCCTTCCTTGTCCTGGATCTTGGCCTTAACGTTGTCGATGGTGTCAGAGCTTTCC 468
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | ||| | || || || || |||||||| || || ||||||||
Sbjct 469 ACCTCGAGGGTGATTGTCTTTCCTGTGAGAGTTTTCACGAAGATCTGCAT 518
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419802947043984
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |