Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raphanus_20raphanistrum_20subsp._20raphanistrum_20[genbank_20GCA_5F0 00769845.1_202014-10-28] 64,732 sequences; 253,833,977 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq11485 136 3e-27 seq4396 132 4e-26 seq1703 127 2e-24 seq25552 122 7e-23 seq7912 116 3e-21 seq7348 114 1e-20 seq964 111 1e-19 seq12662 107 2e-18 seq3667 107 2e-18 seq2054 104 2e-17 seq24793 98.7 8e-16 seq1045 98.7 8e-16 seq526 91.5 1e-13 seq37186 86.0 5e-12 seq20570 86.0 5e-12 >seq11485 Length=6519 Score = 136 bits (150), Expect = 3e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || | ||| | |||||| || || ||||| |||||||| Sbjct 4935 ATACCACCACGGAGACGGAGGACGAGATGAAGCGTAGACTCCTTCTGAATATTGTAATCC 4876 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || ||| ||||| |||||||||||| ||||||| | ||| ||||||||| Sbjct 4875 GCAAGCGTGCGTCCATCCTCAAGCTGTTTACCAGCGAAGATGAGTCTCTGCTGGTCCGGA 4816 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||| ||||| |||||| ||| | | |||| ||||||| | || Sbjct 4815 GGAATTCCTTCCTTGTCCTGGATCTTTGCTTTCACATTGTCAATAGTGTCGGAGCTCTCA 4756 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | || ||||| |||| ||| || |||||||||||||| Sbjct 4755 ACCTCCAAAGTGATGGTCTTGCCTGTCAAAGTCTTGACAAAAATCTGCAT 4706 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 || ||||| || | | ||| || || | ||||| || || || ||||||||||| | Sbjct 5160 CCACCACGAAGACGAAGAACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCAGCC 5101 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | ||| ||| ||| || || ||||| |||||| ||||||| | ||| ||||||||||| Sbjct 5100 AAAGTCCGACCATCCTCGAGCTGTTTCCCAGCGAAGATGAGTCTCTGCTGGTCCGGAGGG 5041 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 |||||||| ||||| |||||| ||| | | || | ||||| | | || || Sbjct 5040 ATGCCTTCCTTGTCCTGAATCTTCGCTTTCACATTGTCGATCGTGTCAGAGCTCTCCACT 4981 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | ||| | ||||| ||||| || || || || ||||||||||| Sbjct 4980 TCAAGGGTAATGGTTTTACCGGTGAGTGTCTTGACGAAAATCTGCAT 4934 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || | ||| | || || || || || |||||||||||| Sbjct 4707 ATACCACCACGGAGACGAAGTACGAGATGGAGAGTTGACTCCTTCTGGATGTTGTAATCG 4648 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || || ||||| || || || |||||| ||||||| | ||| ||||| ||| Sbjct 4647 GCCAGGGTGCGTCCGTCTTCTAGCTGCTTCCCAGCGAAGATGAGCCTCTGCTGGTCGGGA 4588 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || |||||||| ||||| |||||| || | | || | ||||||| | ||| Sbjct 4587 GGGATGCCTTCCTTGTCCTGGATCTTTGCCTTGACATTGTCTATAGTGTCGGAGCTCTCG 4528 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || |||||||| || ||||| || ||||| ||||| Sbjct 4527 ACCTCGAGAGTGATGGTCTTGCCGGTGAGTGTTTTCACGAAAATTTGCAT 4478 >seq4396 Length=13502 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| || | || || || || | || || ||||| |||||||||||||| Sbjct 12718 ACCACCACGCAGACGTAACACCAAGTGAAGGGTTGACTCTTTCTGAATGTTGTAATCAGC 12659 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 || || ||| ||| ||||| || || |||||| ||||||||||||| |||||||| || Sbjct 12658 CAAGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGTGG 12599 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 || || || ||||| |||||| || | | |||| |||||||| | || || Sbjct 12598 GATCCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCCAC 12539 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 |||| || | || || |||||||| || || |||||||||||||| Sbjct 12538 CTCCAAAGTGATAGTCTTCCCGGTCAGTGTCTTAACAAAAATCTGCAT 12491 Score = 125 bits (138), Expect = 6e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 114154 TACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGC 114213 |||| ||||| || || | || | ||| | || || |||||||| |||||||| || Sbjct 12059 TACCACCACGGAGCCTGAGGACAAGATGAAGGGTCGACTCTTTTTGGATGTTGTAGTCAG 12000 Query 114214 TCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAG 114273 | |||||| |||||||||||| || || ||| |||| || | ||| || ||||| | Sbjct 11999 CGAGAGTACGCCCATCTTCAAGTTGCTTCCCGGCGAAGATAAGCCTCTGCTGATCCGGGG 11940 Query 114274 GAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGA 114333 |||||||||| ||||| |||||| ||| | | || | |||||| | | ||| | Sbjct 11939 GAATGCCTTCCTTGTCCTGAATCTTGGCTTTAACGTTGTCGATGGTGTCTGAGCTTTCCA 11880 Query 114334 CGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | || | ||| | ||| || ||||| ||||| || || || |||||||| Sbjct 11879 CCTCGAGGGTGATCGTCTTTCCGGTGAGAGTCTTAACGAATATCTGCAT 11831 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | ||| || || || | ||||| || || || ||||| || || Sbjct 331 ATTCCTCCACGCAGACGCAACACCAAGTGAAGTGTAGACTCCTTCTGGATGTTATAGTCA 272 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || ||| ||| || || || || |||||| ||||||||||||| |||||||| Sbjct 271 GCCAAGGTGCGACCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGT 212 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || || ||||| |||||| || | | |||| |||||||| | || Sbjct 211 GGGATTCCCTCCTTGTCCTGAATCTTAGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCA 152 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || || ||||| || || || ||||| |||||||| Sbjct 151 ACTTCGAGGGTGATTGTCTTTCCGGTTAGTGTCTTGACAAAGATCTGCAT 102 >seq1703 Length=21771 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || |||||||| | ||| || || || | |||||| || || || || ||||||||| Sbjct 18821 ATGCCTCCACGTAGACGCAAGACCAAGTGAAGCGTAGACTCCTTCTGGATATTGTAATCG 18880 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || ||| ||| || || || || || ||| ||||||||||||| || |||||| Sbjct 18881 GCCAAGGTGCGACCATCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGA 18940 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || ||||| ||||| ||||| ||| | | || | |||||||| | ||| Sbjct 18941 GGGATCCCTTCCTTGTCCTGGATCTTGGCTTTCACGTTGTCGATGGTGTCGGAGCTTTCC 19000 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || || ||||| |||||||| || || || ||||| Sbjct 19001 ACCTCGAGGGTGATTGTCTTCCCGGTGAGAGTTTTCACGAAGATTTGCAT 19050 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || || || | || || || || || || ||||| || Sbjct 17909 ATACCACCACGGAGACGGAGGACCAAGTGAAGAGTCGACTCCTTCTGGATATTGTAGTCT 17968 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || ||| ||| || || || || |||||| ||||||||||||| || |||||| Sbjct 17969 GCCAAGGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCCGGA 18028 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || ||||| ||||| ||||| || | | |||| ||||| | | || Sbjct 18029 GGGATACCTTCCTTGTCCTGGATCTTAGCCTTCACGTTGTCAATAGTGTCAGAGCTCTCA 18088 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || |||| || | || || ||||| ||||| || ||||| ||||||||| Sbjct 18089 ACCTCCAATGTGATAGTCTTCCCGGTAAGAGTCTTGACAAAGATCTGCATG 18139 Score = 93.3 bits (102), Expect = 4e-14 Identities = 161/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | || || || || | || || ||||| |||||||||||||| Sbjct 18137 ATGCCACCACGGAGACGTAACACCAAGTGAAGGGTCGACTCTTTCTGAATGTTGTAATCA 18196 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || ||| ||| || || || || |||||| | || || | ||| ||||||||| Sbjct 18197 GCCAAGGTGCGACCATCCTCGAGCTGCTTCCCAGCGAATATCAGCCTCTGCTGGTCCGGA 18256 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || |||||||| || || ||| | | |||| |||||||| || Sbjct 18257 GGGATACCCTCTTTGTCTTGGATTTTCGCTTTCACGTTGTCAATGGTGTCGGAACTCTCC 18316 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 114386 || || | || | ||| || || |||| || || || || ||||||||| || Sbjct 18317 ACCTCTAAAGTGATCGTCTTTCCTGTCAACGTCTTAACGAAGATCTGCATGCCT 18370 >seq25552 Length=2169 Score = 122 bits (134), Expect = 7e-23 Identities = 141/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 114193 CTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGA 114252 |||| || |||||||| || || |||||| |||||| || |||||||| ||| ||| Sbjct 434 CTTTCTGGATGTTGTAGTCAGCCAAAGTACGGCCATCTTCGAGCTGTTTACCGGCGAAGA 375 Query 114253 TGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTT 114312 | |||||||| || |||||||| || ||||||||||| ||||| ||| | | | Sbjct 374 TCAGACGCTGCTGATCCGGAGGGATACCTTCTTTGTCTTGGATCTTGGCTTTGACATTGT 315 Query 114313 CAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 114372 | | |||||||| ||| ||||| || | || | || ||||| || || ||||| || | Sbjct 314 CGATGGTGTCGGAGGACTCGACTTCGAGAGTGATGGTCTTGCCCGTTAGGGTTTTCACGA 255 Query 114373 AAATCTGCAT 114382 | |||||||| Sbjct 254 AGATCTGCAT 245 >seq7912 Length=9007 Score = 116 bits (128), Expect = 3e-21 Identities = 165/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| || | ||| || || || | || || || ||||| || ||||| ||| Sbjct 6107 ACCACCACGAAGACGCAACACCAAGTGAAGTGTGGACTCCTTTTGGATATTGTAGTCGGC 6166 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 | || ||| ||| ||||| || || |||||| ||||||||||||| ||||||||||| Sbjct 6167 TAAGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGG 6226 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 || ||||| || || ||||| || | | |||| |||||| | | || || Sbjct 6227 GATACCTTCCTTATCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCAGAGCTCTCCAC 6286 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 114386 |||| || | || |||||||| || || || ||||| ||||||||| || Sbjct 6287 CTCCAACGTGATGGTCTTGCCGGTAAGTGTCTTGACAAAGATCTGCATGCCT 6338 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | ||| || || || | || || || ||||| |||||||| ||| Sbjct 6333 ATGCCTCCACGCAGACGCAACACCAAGTGAAGTGTGGACTCCTTTTGGATGTTGTAGTCG 6392 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || ||| ||| ||||| ||||| |||||| ||||||| | ||| ||||||||| Sbjct 6393 GCTAAGGTGCGACCATCCTCAAGCTGTTTCCCAGCGAAGATGAGCCTCTGCTGGTCCGGA 6452 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || || ||||| ||||| || | | |||| |||||||| | || Sbjct 6453 GGGATACCCTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCA 6512 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || |||| || | || || || |||| ||| || ||||| ||||||||| Sbjct 6513 ACCTCCAAAGTAATGGTCTTTCCAGTCAAAGTCTTGACAAAGATCTGCATG 6563 >seq7348 Length=9517 Score = 114 bits (126), Expect = 1e-20 Identities = 161/226 (71%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || || | || || || | || || || || || |||||||| ||| Sbjct 226 ATACCACCACGAAGCCTGAGCACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCG 167 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| ||| ||| || || || || |||||| ||||||||||||| ||||||||| Sbjct 166 GCAAGAGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGA 107 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || ||||| ||||| ||||| || | | |||| |||||||| | || Sbjct 106 GGGATACCTTCCTTGTCCTGGATCTTAGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCA 47 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCT 114378 || |||| || | || |||||||| ||||| || || || |||| Sbjct 46 ACTTCCAATGTGATGGTCTTGCCGGTAAGAGTCTTCACGAAGATCT 1 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATC- 114211 ||||| ||||| || | | | || || | || || || || || |||||||| || Sbjct 454 ATACCACCACGGAGACGGAGGGCCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCT 395 Query 114212 GCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGG 114271 ||| | || ||| ||| ||||| || || |||||| ||||||||||||| || ||||| Sbjct 394 GCTAAG-GTGCGACCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCCGG 336 Query 114272 AGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTC 114331 ||| |||||||| ||||| ||||| |||| | |||| |||||| | | || Sbjct 335 AGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTGTCAATGGTGTCAGAGCTCTC 276 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || || || |||| || || || || |||||||| Sbjct 275 CACCTCAAGTGTGATGGTCTTACCAGTCAAGGTCTTCACGAATATCTGCAT 225 >seq964 Length=27231 Score = 111 bits (122), Expect = 1e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | ||| || | || | || || || || || || |||||||| Sbjct 10406 ATACCACCACGGAGACGCAACACAAGGTGAAGGGTCGACTCCTTCTGGATATTGTAATCT 10347 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | |||||| ||| ||||| ||||| |||||| ||||||| | ||| |||||||| Sbjct 10346 GCAAGCGTACGACCATCCTCAAGCTGTTTCCCAGCGAAGATGAGTCTCTGCTGGTCCGGT 10287 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || ||||| ||||| |||||| || | | || | ||||| | | || Sbjct 10286 GGGATCCCTTCCTTGTCCTGAATCTTAGCCTTGACGTTATCGATCGTGTCAGAGCTCTCC 10227 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || |||| || | |||||||| || || || || ||||||||||||||| Sbjct 10226 ACCTCCAAAGTGATGGTTTTGCCAGTGAGGGTCTTCACAAAAATCTGCATG 10176 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 114173 AACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTC 114232 ||| | ||| | || || || || || || ||||||||| || ||||| ||| || Sbjct 9702 AACGAGATGGAGAGTCGACTCCTTCTGGATATTGTAATCGGCCAAGGTACGTCCATCCTC 9643 Query 114233 AAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGC 114292 || |||||||| ||| ||||||| | ||| |||||||||||||| ||||| ||||| Sbjct 9642 GAGCTGTTTACCGGCGAAGATGAGCCTCTGCTGGTCCGGAGGAATACCTTCCTTGTCCTG 9583 Query 114293 AATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTT 114352 ||||| || | | || | ||| |||| | ||||| || | || | || || Sbjct 9582 GATCTTAGCCTTGACGTTATCGATGGTATCGGAGCTCTCGACTTCGAGAGTGATGGTCTT 9523 Query 114353 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 |||||| |||||||| || ||||| ||||| Sbjct 9522 GCCGGTGAGAGTTTTCACGAAAATTTGCAT 9493 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 || ||||| || | | ||| || || | ||| || || || || || ||||| || Sbjct 10631 CCACCACGAAGACGAAGAACCAAGTGAAGCGTCGACTCCTTCTGGATATTGTAGTCAGCA 10572 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | || ||| ||| ||||| || ||||||||| ||||||| | ||||||||||||||| Sbjct 10571 AGCGTGCGACCATCCTCAAGCTGCTTACCAGCGAAGATGAGTCTCTGTTGGTCCGGAGGG 10512 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 || ||||| ||||| ||| || || | | || | ||||| | | || || Sbjct 10511 ATCCCTTCCTTGTCCTGAATTTTAGCCTTCACATTGTCGATTGTGTCTGAGCTCTCAACT 10452 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 |||| ||| | || ||||| |||||||| || ||||| || ||||| Sbjct 10451 TCCAAGGTAATAGTCTTGCCTGTCAGAGTCTTCACAAAGATTTGCAT 10405 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 114179 ATGTATCGTAGATTCTTTTTGAATGTTGTAATC-GCTCATAGTACGAGAATCTTCAAGTT 114237 ||| | |||||| ||||| ||||||||||| || ||| | || || ||| || || | Sbjct 10152 ATGCAGCGTAGACTCTTTCTGAATGTTGTAGTCAGCT-AGCGTGCGTCCATCCTCCAGCT 10094 Query 114238 GTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCT 114297 | ||||| || ||||||| | ||| |||||||| || || || ||||| || |||| Sbjct 10093 GCTTACCGGCAAAGATGAGCCTCTGCTGGTCCGGTGGGATACCCTCTTTATCCTGGATCT 10034 Query 114298 TTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGG 114357 | || | | |||| |||||| | | || || |||| || | ||||| |||| Sbjct 10033 TAGCCTTGACGTTGTCAATGGTGTCTGAGCTCTCAACCTCCAAAGTGATGGTTTTACCGG 9974 Query 114358 TCAGAGTTTTTACAAAAATCTGCAT 114382 | || || || ||||| || ||||| Sbjct 9973 TGAGGGTCTTGACAAAGATTTGCAT 9949 >seq12662 Length=5898 Score = 107 bits (118), Expect = 2e-18 Identities = 163/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 114151 AAATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAAT 114210 ||| ||| ||||| || | ||| || || || || || || || || || |||||||| | Sbjct 3948 AAAAACCACCACGGAGACGCAACACCAAGTGAATGGTTGACTCCTTCTGGATGTTGTAGT 3889 Query 114211 CGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCG 114270 || | || ||| ||| ||||| || || |||||| ||||||||||||| ||||| | Sbjct 3888 CGGCAAGGGTGCGACCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTG 3829 Query 114271 GAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATT 114330 |||| |||||||| || || ||||| ||| | | |||| ||||| | | | Sbjct 3828 GAGGGATGCCTTCCTTATCTTGGATCTTGGCTTTCACGTTATCAATCGTGTCCGAGCTCT 3769 Query 114331 CGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | || || | ||| | || || || |||| || || || || |||||||| Sbjct 3768 CAACTTCGAGGGTGATGGTCTTACCAGTCAAGGTCTTCACGAAGATCTGCAT 3717 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || || | ||| | ||| | || || || || || ||||||||||| Sbjct 3490 ATACCACCACGGAGCCTGAGAACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAATCA 3431 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| | || || || || || || ||| |||| || | ||| || ||||| Sbjct 3430 GCGAGAGTCCTGCCGTCCTCGAGCTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGG 3371 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| || ||||| |||||| ||| | | || | |||||| | | ||| Sbjct 3370 GGAATGCCCTCCTTGTCCTGAATCTTGGCTTTAACGTTGTCGATGGTGTCTGAGCTTTCC 3311 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || || || || ||||| || |||||||||||||| Sbjct 3310 ACCTCGAGGGTGATTGTCTTTCCCGTGAGAGTCTTAACAAAAATCTGCAT 3261 >seq3667 Length=14967 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 ||||| || || || |||||||| ||| | || || || || || ||||| || Sbjct 5525 GTAGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCCTCGAGCTGTTTCCCG 5584 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||| || ||||| ||||||||||| |||||||| ||||| ||||| ||| Sbjct 5585 GCGAAGATCAGCCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCTTTG 5644 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | |||||||| |||||||| || | ||| | ||| || || || || ||| Sbjct 5645 ACATTGTCGATGGTGTCGGAAGATTCGACCTCGAGGGTGATCGTCTTCCCCGTTAGGGTT 5704 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 5705 TTCACGAAGATCTGCAT 5721 >seq2054 Length=20018 Score = 104 bits (114), Expect = 2e-17 Identities = 137/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 114193 CTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGA 114252 |||| || |||||||| || || |||||| |||||| || |||||||| ||| ||| Sbjct 3204 CTTTCTGGATGTTGTAGTCAGCCAAAGTACGGCCATCTTCGAGCTGTTTACCGGCGAAGA 3263 Query 114253 TGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTT 114312 | | | ||| || || ||||| || ||||||||||| ||||| || | | | Sbjct 3264 TCAATCTCTGCTGATCTGGAGGGATACCTTCTTTGTCTTGGATCTTGGCCTTGACATTGT 3323 Query 114313 CAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 114372 | | |||||||| ||| ||||| || | ||| | || || ||||| || ||||| || | Sbjct 3324 CGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTTCCGGTTAGGGTTTTCACGA 3383 Query 114373 AAATCTGCAT 114382 | |||||||| Sbjct 3384 AGATCTGCAT 3393 >seq24793 Length=2311 Score = 98.7 bits (108), Expect = 8e-16 Identities = 161/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 114151 AAATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAAT 114210 ||| ||| ||||| || | ||| || || || | ||||| || || || || ||||| | Sbjct 1154 AAAAACCACCACGCAGACGCAAGACCAAGTGAAGTGTAGACTCCTTCTGGATATTGTAGT 1213 Query 114211 CGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCG 114270 | | ||| ||| ||| || || || || |||||| ||||||||||||| ||||| | Sbjct 1214 CAGCGAGAGTCCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTG 1273 Query 114271 GAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATT 114330 |||| || ||||| || || ||||| ||| | | |||| ||||| | | | Sbjct 1274 GAGGGATCCCTTCCTTATCTTGGATCTTGGCTTTCACGTTATCAATCGTGTCCGAGCTCT 1333 Query 114331 CGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | || || | ||| | || || || |||| || || ||||| |||||||| Sbjct 1334 CAACTTCGAGGGTGATGGTCTTACCAGTCAAGGTCTTCACAAAGATCTGCAT 1385 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || || | ||| | ||| | || || || || || ||||||||||| Sbjct 1612 ATACCACCACGGAGCCTGAGAACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAATCA 1671 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| | || || || || || || ||| |||| || | ||| || ||||| Sbjct 1672 GCGAGAGTCCTGCCGTCCTCGAGCTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGG 1731 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| || ||||| |||||| ||| | | || | |||||| | | ||| Sbjct 1732 GGAATGCCCTCCTTGTCCTGAATCTTGGCTTTAACGTTGTCGATGGTGTCTGAGCTTTCC 1791 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || || || || ||||| || |||||||||||||| Sbjct 1792 ACCTCGAGGGTGATTGTCTTTCCCGTGAGAGTCTTAACAAAAATCTGCAT 1841 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || || | ||| | ||| | ||||| || || || |||||||| || Sbjct 1384 ATACCACCACGGAGCCTGAGAACGAGATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCC 1443 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || | |||||||| || || || ||| |||| | | ||| ||||||||| Sbjct 1444 GCCAATGTTCTGCCGTCTTCAAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCCGGA 1503 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || || ||||| |||||| ||| | | || | |||||||| | || Sbjct 1504 GGGATACCCTCCTTGTCTTGGATCTTTGCTTTGACGTTGTCGATGGTGTCGGAGCTCTCC 1563 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | ||| || || |||| || || || || |||||||| Sbjct 1564 ACCTCTAGGGTAATCGTCTTTCCCGTCAAGGTCTTAACGAAGATCTGCAT 1613 >seq1045 Length=26565 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 ||||| || || || |||||||| ||| | || || || || || ||||| || Sbjct 2822 GTAGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCCTCGAGCTGTTTCCCG 2881 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||| || ||||| ||||||||||| |||||||| ||||| ||||| || Sbjct 2882 GCGAAGATCAGCCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTG 2941 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | |||||||| ||| ||||| || | ||| | || || || || || ||| Sbjct 2942 ACGTTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATTGTCTTCCCCGTTAGGGTT 3001 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 3002 TTCACGAAGATCTGCAT 3018 >seq526 Length=33339 Score = 91.5 bits (100), Expect = 1e-13 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 114165 AGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGA 114224 || ||||| || | ||| | ||||| ||||| || |||||||||||| | || || Sbjct 23191 AGCCTCAAGACGAGATGGAGAGTAGACTCTTTCTGGATGTTGTAATCGGCTAGGGTTCGG 23132 Query 114225 GAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCT 114284 |||||||| || ||||| ||| ||||||| | ||||||||||| || || |||||| Sbjct 23131 CCGTCTTCAAGCTGCTTACCGGCGAAGATGAGCCTTTGTTGGTCCGGTGGTATACCTTCT 23072 Query 114285 TTGTC 114289 ||||| Sbjct 23071 TTGTC 23067 >seq37186 Length=985 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 ||||| || || || |||||||| || || || | |||||||| || || || Sbjct 13 GTAGACTCCTTCTGGATGTTGTAGTCCGCCAATGTTCTGCCGTCTTCAAGCTGCTTGCCG 72 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||| | | ||| ||||||||||| || || || ||||| ||||| ||| Sbjct 73 GCGAAGATCAACCTCTGCTGGTCCGGAGGGATACCCTCCTTGTCTTGGATCTTAGCTTTG 132 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| |||||||| | || || |||| || | || |||||||||| || Sbjct 133 ACATTGTCAATGGTGTCGGAGCTCTCCACCTCCAAAGTAATGGTCTTGCCGGTCAATGTC 192 Query 114366 TTTACAAAAATCTGCAT 114382 || || ||||||||||| Sbjct 193 TTAACGAAAATCTGCAT 209 >seq20570 Length=3172 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| |||||||| | ||| || || || | ||||| || || || |||||||| || Sbjct 289 ATACCACCACGTAGACGCAACACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCA 348 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || | || || | || || || ||| |||| || | ||| || |||||| Sbjct 349 GCCAAGGTTCTCCCGTCCTCCAACTGCTTTCCTGCGAAGATAAGCCTCTGCTGATCCGGA 408 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||| ||||| ||||| || | | || | |||||| | | ||| Sbjct 409 GGAATCCCTTCCTTGTCCTGGATCTTGGCCTTAACGTTGTCGATGGTGTCAGAGCTTTCC 468 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || || || || |||||||| || || |||||||| Sbjct 469 ACCTCGAGGGTGATTGTCTTTCCTGTGAGAGTTTTCACGAAGATCTGCAT 518 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419802947043984