Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raphanus_20raphanistrum_20subsp._20raphanistrum_20[genbank_20GCA_5F0 00769845.1_202014-10-28] 64,732 sequences; 253,833,977 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq11485 136 4e-27 seq964 132 5e-26 seq7912 116 4e-21 seq37186 114 1e-20 seq23940 114 1e-20 seq6096 114 1e-20 seq1703 113 5e-20 seq14782 109 5e-19 seq7348 109 5e-19 seq806 109 5e-19 seq4396 105 7e-18 seq12662 104 2e-17 seq24793 100 3e-16 seq3667 95.1 1e-14 seq1045 95.1 1e-14 seq526 95.1 1e-14 >seq11485 Length=6519 Score = 136 bits (150), Expect = 4e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || ||||| | || || || || || ||||||||||| || | |||||| |||| Sbjct 4690 AAGTACGAGATGGAGAGTTGACTCCTTCTGGATGTTGTAATCGGCCAGGGTGCGTCCGTC 4631 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||| |||||||| || || | ||||||| ||||||||||||||| || ||||| || || Sbjct 4630 TTCTAGCTGCTTCCCAGCGAAGATGAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTGTC 4571 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || ||| ||| ||| || | || || | || || || | ||| | ||| Sbjct 4570 CTGGATCTTTGCCTTGACATTGTCTATAGTGTCGGAGCTCTCGACCTCGAGAGTGATGGT 4511 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||||||| | ||||| |||||||||||||| Sbjct 4510 CTTGCCGGTGAGTGTTTTCACGAAAATTTGCAT 4478 Score = 125 bits (138), Expect = 7e-24 Identities = 157/213 (74%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||||| ||| || || || ||||| |||||||| || | ||||| | || Sbjct 4917 AGGACGAGATGAAGCGTAGACTCCTTCTGAATATTGTAATCCGCAAGCGTGCGTCCATCC 4858 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 |||||||| || || || | ||||| | ||||||||| |||||||||||||| || || Sbjct 4857 TCAAGCTGTTTACCAGCGAAGATGAGTCTCTGCTGGTCCGGAGGAATTCCTTCCTTGTCC 4798 Query 64352 TGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || | | |||||||| ||| || | || || | || || || | ||| | ||| Sbjct 4797 TGGA-TCTTTGCTTTCACATTGTCAATAGTGTCGGAGCTCTCAACCTCCAAAGTGATGGT 4739 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||| |||||||| || || ||||| ||||| Sbjct 4738 CTTGCCTGTCAAAGTCTTGACAAAAATCTGCAT 4706 Score = 86.0 bits (94), Expect = 6e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| || || || || || ||||||||||| || | || || | || || ||||| Sbjct 5136 TGAAGAGTAGACTCCTTCTGGATGTTGTAATCAGCCAAAGTCCGACCATCCTCGAGCTGT 5077 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 || || || | ||||| | ||||||||| ||||| || ||||| || || || | | || Sbjct 5076 TTCCCAGCGAAGATGAGTCTCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTG-AATCTT 5018 Query 64361 TGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGT 64419 ||||| ||| || | || ||| | |||||||| | || | ||| || ||||| Sbjct 5017 CGCTTTCACATTGTCGATCGTGTCAGAGCTCTCCACTTCAAGGGTAATGGTTTTACCGGT 4958 Query 64420 CAAAGTTTTTACGAAAATTTGCAT 64443 | || || |||||||| ||||| Sbjct 4957 GAGTGTCTTGACGAAAATCTGCAT 4934 >seq964 Length=27231 Score = 132 bits (146), Expect = 5e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | ||| || || || ||||| | ||||| || || || || |||||||| || Sbjct 9720 ACCACCTCTCAACCTGAGAACGAGATGGAGAGTCGACTCCTTCTGGATATTGTAATCGGC 9661 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||| || | || || ||||| || ||||| | ||||||| ||||||||| ||||| Sbjct 9660 CAAGGTACGTCCATCCTCGAGCTGTTTACCGGCGAAGATGAGCCTCTGCTGGTCCGGAGG 9601 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| ||||| || || || || || ||| || || | ||||| | || || Sbjct 9600 AATACCTTCCTTGTCCTGGATCTTAGCCTTGACGTTATCGATGGTATCGGAGCTCTCGAC 9541 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| | ||| | |||||||||||| | |||||| |||||||||||||| Sbjct 9540 TTCGAGAGTGATGGTCTTGCCGGTGAGAGTTTTCACGAAAATTTGCAT 9493 Score = 105 bits (116), Expect = 7e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 64228 TCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGC 64287 || |||||| ||||| | ||| || ||||| ||||||||||| || || | ||||| | Sbjct 10164 TCGAAGCACAAGATGCAGCGTAGACTCTTTCTGAATGTTGTAGTCAGCTAGCGTGCGTCC 10105 Query 64288 GTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTT 64347 || || |||||||| |||||| | ||||||| ||||||||| || || || || ||||| Sbjct 10104 ATCCTCCAGCTGCTTACCGGCAAAGATGAGCCTCTGCTGGTCCGGTGGGATACCCTCTTT 10045 Query 64348 TTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTAC 64407 || || || || ||| || || | || || | || || || | ||| | Sbjct 10044 ATCCTGGATCTTAGCCTTGACGTTGTCAATGGTGTCTGAGCTCTCAACCTCCAAAGTGAT 9985 Query 64408 GGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| || ||||| | || || || || |||||||| Sbjct 9984 GGTTTTACCGGTGAGGGTCTTGACAAAGATTTGCAT 9949 Score = 100 bits (110), Expect = 3e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| |||||| || || || || ||||| || || | ||||| | || ||||||||| Sbjct 10607 TGAAGCGTCGACTCCTTCTGGATATTGTAGTCAGCAAGCGTGCGACCATCCTCAAGCTGC 10548 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 || || || | ||||| | ||| ||||| ||||| || ||||| || || || ||||| Sbjct 10547 TTACCAGCGAAGATGAGTCTCTGTTGGTCCGGAGGGATCCCTTCCTTGTCCTGAATTTTA 10488 Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420 ||| ||| || | ||| || | || ||||| | || | |||||||| ||| Sbjct 10487 GCCTTCACATTGTCGATTGTGTCTGAGCTCTCAACTTCCAAGGTAATAGTCTTGCCTGTC 10428 Query 64421 AAAGTTTTTACGAAAATTTGCAT 64443 | ||| || || || |||||||| Sbjct 10427 AGAGTCTTCACAAAGATTTGCAT 10405 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 64234 CACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTC 64293 ||| || |||| ||||| || || || || ||||||||||| | || || | || || Sbjct 10386 CACAAGGTGAAGGGTCGACTCCTTCTGGATATTGTAATCTGCAAGCGTACGACCATCCTC 10327 Query 64294 AAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTG 64353 |||||| || || || | ||||| | ||||||||| || || || ||||| || || || Sbjct 10326 AAGCTGTTTCCCAGCGAAGATGAGTCTCTGCTGGTCCGGTGGGATCCCTTCCTTGTCCTG 10267 Query 64354 TATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTT 64413 || || ||| || || | || ||| | ||||| || | ||| | ||| || Sbjct 10266 AATCTTAGCCTTGACGTTATCGATCGTGTCAGAGCTCTCCACCTCCAAAGTGATGGTTTT 10207 Query 64414 GCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| || | || || || ||||| ||||| Sbjct 10206 GCCAGTGAGGGTCTTCACAAAAATCTGCAT 10177 >seq7912 Length=9007 Score = 116 bits (128), Expect = 4e-21 Identities = 157/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 64229 CTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCG 64288 || || || ||||||| ||| || || ||||| |||||||| ||||| | || | || Sbjct 6576 CTGAGAACGAGATGAAGCGTAGACTCCTTTTGGATGTTGTAGTCTGCCAATGTTCTGCCG 6635 Query 64289 TCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTT 64348 ||||| |||||||||||||| | ||||||| |||||| |||||||| || ||||| || Sbjct 6636 TCTTCGAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGATCGGGAGGGATACCTTCCTTG 6695 Query 64349 TCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTAC 64407 || || | | || ||||| || || | ||| || | ||||| || | || | Sbjct 6696 TCCTG-AATCTTGGCTTTGACGTTGTCGATTGTGTCGGAGCTTTCCACCTCGAGGGTGAT 6754 Query 64408 GGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||| || || | ||| || ||||| || ||||| Sbjct 6755 GGTCTTTCCCGTGAGAGTCTTAACGAAGATCTGCAT 6790 Score = 105 bits (116), Expect = 7e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| || || || ||||| || ||||| || || | |||||| | || ||||||||| Sbjct 6132 TGAAGTGTGGACTCCTTTTGGATATTGTAGTCGGCTAAGGTGCGACCATCCTCAAGCTGC 6191 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 ||||| || | ||||| ||||||||||| ||||| || ||||| || || || || || Sbjct 6192 TTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTATCCTGGATCTTG 6251 Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420 ||| ||| || | || ||| | ||||| || | || | |||||||||||| Sbjct 6252 GCCTTGACATTGTCAATGGTGTCAGAGCTCTCCACCTCCAACGTGATGGTCTTGCCGGTA 6311 Query 64421 AAAGTTTTTACGAAAATTTGCAT 64443 | || || || || || ||||| Sbjct 6312 AGTGTCTTGACAAAGATCTGCAT 6334 >seq37186 Length=985 Score = 114 bits (126), Expect = 1e-20 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294 || ||||| | || || || || || |||||||| || || | || | |||||||| Sbjct 1 ACGAGATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCCGCCAATGTTCTGCCGTCTTCA 60 Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354 |||||||||||||| | || | || ||||||||| ||||| || || || || ||||| Sbjct 61 AGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATACCCTCCTTGTCTTGG 120 Query 64355 ATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTT 64413 | | || ||||| ||| || | || || | ||||| || | ||| | |||||| Sbjct 121 A-TCTTAGCTTTGACATTGTCAATGGTGTCGGAGCTCTCCACCTCCAAAGTAATGGTCTT 179 Query 64414 GCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||||||| || || |||||||| ||||| Sbjct 180 GCCGGTCAATGTCTTAACGAAAATCTGCAT 209 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || || | || || || ||||| | || || || ||||| |||||||| || || Sbjct 210 ACCACCACGGAGCCTGAGAACGAGATGCAAAGTTGACTCCTTTTGGATGTTGTAGTCAGC 269 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || || | || | || ||||||||||||||| | || | || ||||||||| || || Sbjct 270 GAGAGTCCTGCCGACCTCGAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCCGGTGG 329 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||||| || || || || || || ||| ||| || | || || | ||||| Sbjct 330 GATTCCCTCCTTGTCCTGAATCTTAGCCTTGACATTATCGATGGTGTCCGAGCTCTCCAC 389 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | ||| | |||||| ||||| | || || ||||| || ||||| Sbjct 390 CTCGAGAGTGATGGTCTTTCCGGTAAGGGTCTTGACGAAGATCTGCAT 437 >seq23940 Length=2465 Score = 114 bits (126), Expect = 1e-20 Identities = 102/128 (80%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || || |||| |||||| || || || |||||||| || |||| |||||| |||| Sbjct 2316 AGAACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGTCCGTCC 2375 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || |||||||| ||||| ||||||| ||||||||||| ||||| || ||||| || ||| Sbjct 2376 TCGAGCTGCTTTCCGGCGAAAATGAGGCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCT 2435 Query 64352 TGTATTTT 64359 || || || Sbjct 2436 TGGATCTT 2443 >seq6096 Length=10951 Score = 114 bits (126), Expect = 1e-20 Identities = 102/128 (80%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || || |||| |||||| || || || |||||||| || |||| |||||| |||| Sbjct 10790 AGAACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGTCCGTCC 10849 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || |||||||| ||||| ||||||| ||||||||||| ||||| || ||||| || ||| Sbjct 10850 TCGAGCTGCTTTCCGGCGAAAATGAGGCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCT 10909 Query 64352 TGTATTTT 64359 || || || Sbjct 10910 TGGATCTT 10917 >seq1703 Length=21771 Score = 113 bits (124), Expect = 5e-20 Identities = 149/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| ||||| ||||| |||||||||||||| || | |||||| | || || |||||| Sbjct 18164 TGAAGGGTCGACTCTTTCTGAATGTTGTAATCAGCCAAGGTGCGACCATCCTCGAGCTGC 18223 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 || || || | || |||| ||||||||| ||||| || || ||||| ||||| | |||| Sbjct 18224 TTCCCAGCGAATATCAGCCTCTGCTGGTCCGGAGGGATACCCTCTTTGTCTTGGA-TTTT 18282 Query 64361 TGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGT 64419 ||||| || || | || || ||||| |||| ||| | ||||| || || Sbjct 18283 CGCTTTCACGTTGTCAATGGTGTCGGAACTCTCCACCTCTAAAGTGATCGTCTTTCCTGT 18342 Query 64420 CAAAGTTTTTACGAAAATTTGCAT 64443 ||| || || ||||| || ||||| Sbjct 18343 CAACGTCTTAACGAAGATCTGCAT 18366 >seq14782 Length=4961 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || || |||| ||||| || || || ||||||||||| |||| ||| | ||||| Sbjct 1984 AGAACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCCGCGAGGGTCCTTCCGTCT 2043 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || |||||||| ||||| | || || ||||||||||| || || || ||||| || || Sbjct 2044 TCCAGCTGCTTCCCGGCGAAGATCAGACGCTGCTGGTCCGGTGGGATCCCTTCCTTGTCC 2103 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| || | || || | || || |||| |||| ||| Sbjct 2104 TGAATCTTGGCCTTGACATTGTCGATCGTGTCGGATGATTCGACCTCTAGGGTTATCGTC 2163 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 || || || | ||||| ||||| || |||||||| Sbjct 2164 TTCCCCGTTAGGGTTTTCACGAAGATCTGCATTTT 2198 >seq7348 Length=9517 Score = 109 bits (120), Expect = 5e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| ||||| || || || |||||||| ||||| | |||||| | || ||||||||| Sbjct 427 TGAAGGGTCGACTCCTTCTGGATGTTGTAGTCTGCTAAGGTGCGACCATCCTCAAGCTGC 368 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 || || || | ||||| |||||||| || ||||| || ||||| || || || || || Sbjct 367 TTTCCAGCGAAGATGAGACGCTGCTGATCCGGAGGGATGCCTTCCTTGTCCTGGATCTTG 308 Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420 |||||| || | || ||| | ||||| || | || | |||||| || ||| Sbjct 307 GCCTTTACGTTGTCAATGGTGTCAGAGCTCTCCACCTCAAGTGTGATGGTCTTACCAGTC 248 Query 64421 AAAGTTTTTACGAAAATTTGCAT 64443 || || || ||||| || ||||| Sbjct 247 AAGGTCTTCACGAATATCTGCAT 225 Score = 95.1 bits (104), Expect = 1e-14 Identities = 154/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || || | || ||||| | |||| ||||| || || || |||||||| || || Sbjct 224 ACCACCACGAAGCCTGAGCACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGC 165 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| | || || |||||||| || || | ||||| ||||||||||| ||||| Sbjct 164 AAGAGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGG 105 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || ||||| || || || || || ||| || || | || || | || || Sbjct 104 GATACCTTCCTTGTCCTGGATCTTAGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCAAC 45 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAAT 64437 ||| | || | |||||||||||| | ||| || ||||| || Sbjct 44 TTCCAATGTGATGGTCTTGCCGGTAAGAGTCTTCACGAAGAT 3 >seq806 Length=29032 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||||| |||||| || || || |||||||| || |||| ||||| ||||| Sbjct 17965 AGGACGAGATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGTGTGCGGCCGTCT 18024 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || |||||||| ||||| | || || ||||||||||| || || || ||||| || || Sbjct 18025 TCGAGCTGCTTCCCGGCGAAGATCAGTCGCTGCTGGTCCGGCGGGATCCCTTCCTTGTCC 18084 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| || || | || || || || || || | |||| ||| Sbjct 18085 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTTATCGTC 18144 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 || || || | ||||| ||||| || ||||| || Sbjct 18145 TTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 18179 >seq4396 Length=13502 Score = 105 bits (116), Expect = 7e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| || || ||||| |||||||||||||| || | |||||| | || ||||||||| Sbjct 12693 TGAAGGGTTGACTCTTTCTGAATGTTGTAATCAGCCAAGGTGCGACCATCCTCAAGCTGC 12634 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 ||||| || | ||||| ||||||||||| || || || || || || || || || || Sbjct 12633 TTGCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGGATCCCCTCCTTGTCCTGAATCTTG 12574 Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420 ||| || || | || || | ||||| || | ||| | ||||| |||||| Sbjct 12573 GCCTTGACGTTGTCAATGGTGTCGGAGCTCTCCACCTCCAAAGTGATAGTCTTCCCGGTC 12514 Query 64421 AAAGTTTTTACGAAAATTTGCAT 64443 | || || || ||||| ||||| Sbjct 12513 AGTGTCTTAACAAAAATCTGCAT 12491 Score = 93.3 bits (102), Expect = 4e-14 Identities = 145/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| || || || || || || ||||| || |||| || | |||| || |||||| Sbjct 532 TGAAGTGTAGACTCCTTCTGGATATTGTAGTCAGCGAGAGTCCTGCCGTCCTCGAGCTGC 473 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 || || || | ||||| ||||||||||| ||||| || ||||| || ||||| | | || Sbjct 472 TTTCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGGATCCCTTCCTTATCTTGGA-TCTT 414 Query 64361 TGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGT 64419 ||||| || || | || || | ||||| || | || | |||||| || || Sbjct 413 GGCTTTCACGTTATCAATCGTGTCCGAGCTCTCCACCTCCAGTGTGATGGTCTTACCAGT 354 Query 64420 CAAAGTTTTTACGAAAATTTGCATT 64444 ||| || || ||||| ||||||||| Sbjct 353 CAAGGTCTTGACGAAGATTTGCATT 329 >seq12662 Length=5898 Score = 104 bits (114), Expect = 2e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 ||||| || || || || || |||||||| || || | |||||| | || ||||||||| Sbjct 3919 TGAATGGTTGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGACCATCCTCAAGCTGC 3860 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 || || || | ||||| ||||||||||| ||||| || ||||| || ||||| | | || Sbjct 3859 TTTCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGGATGCCTTCCTTATCTTGGA-TCTT 3801 Query 64361 TGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGT 64419 ||||| || || | || || | || ||||| | || | |||||| || || Sbjct 3800 GGCTTTCACGTTATCAATCGTGTCCGAGCTCTCAACTTCGAGGGTGATGGTCTTACCAGT 3741 Query 64420 CAAAGTTTTTACGAAAATTTGCAT 64443 ||| || || ||||| || ||||| Sbjct 3740 CAAGGTCTTCACGAAGATCTGCAT 3717 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || || | || || || ||||| | || || || || || |||||||| || || Sbjct 3716 ACCACCACGGAGCCTGAGAACGAGATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCAGC 3657 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || || | ||||||||||||||||||| || | || | || ||||||||| || || Sbjct 3656 GAGAGTTCTGCCGTCTTCAAGCTGCTTGCCTGCGAAGATCAACCTCTGCTGGTCCGGTGG 3597 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCA 64394 || || || || ||||| | | |||||||| || || | || || | |||| Sbjct 3596 GATCCCCTCCTTGTCTTGGA-TCTTTGCTTTGACGTTGTCGATGGTGTCGGAGCTCTCCA 3538 Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 | |||| || | ||||| || ||||| || || ||||| || ||||| Sbjct 3537 CCTCTAGGGTAATCGTCTTTCCCGTCAAGGTCTTAACGAAGATCTGCAT 3489 Score = 86.0 bits (94), Expect = 6e-12 Identities = 111/152 (73%), Gaps = 1/152 (1%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || || | || || || ||||||| ||||| || || || ||||||||||| || Sbjct 3488 ACCACCACGGAGCCTGAGAACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAATCAGC 3429 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || || | |||| || |||||||| ||||| | || |||| |||||| || || || Sbjct 3428 GAGAGTCCTGCCGTCCTCGAGCTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGGGG 3369 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTA 64367 ||| || || || || || | | || |||||| Sbjct 3368 AATGCCCTCCTTGTCCTG-AATCTTGGCTTTA 3338 >seq24793 Length=2311 Score = 100 bits (110), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || || | || || || ||||| | || || || || || |||||||| || || Sbjct 1386 ACCACCACGGAGCCTGAGAACGAGATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCCGC 1445 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || | |||||||||||||||||||||| | || | || ||||||||| ||||| Sbjct 1446 CAATGTTCTGCCGTCTTCAAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCCGGAGG 1505 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCA 64394 || || || || ||||| | | |||||||| || || | || || | |||| Sbjct 1506 GATACCCTCCTTGTCTTGGA-TCTTTGCTTTGACGTTGTCGATGGTGTCGGAGCTCTCCA 1564 Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 | |||| || | ||||| || ||||| || || ||||| || ||||| Sbjct 1565 CCTCTAGGGTAATCGTCTTTCCCGTCAAGGTCTTAACGAAGATCTGCAT 1613 Score = 86.0 bits (94), Expect = 6e-12 Identities = 111/152 (73%), Gaps = 1/152 (1%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || || | || || || ||||||| ||||| || || || ||||||||||| || Sbjct 1614 ACCACCACGGAGCCTGAGAACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAATCAGC 1673 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || || | |||| || |||||||| ||||| | || |||| |||||| || || || Sbjct 1674 GAGAGTCCTGCCGTCCTCGAGCTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGGGG 1733 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTA 64367 ||| || || || || || | | || |||||| Sbjct 1734 AATGCCCTCCTTGTCCTG-AATCTTGGCTTTA 1764 Score = 82.4 bits (90), Expect = 8e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| || || || || || || ||||| || |||| || || | || || |||||| Sbjct 1183 TGAAGTGTAGACTCCTTCTGGATATTGTAGTCAGCGAGAGTCCGACCATCCTCGAGCTGC 1242 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 || || || | ||||| ||||||||||| ||||| || ||||| || ||||| | | || Sbjct 1243 TTTCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGGATCCCTTCCTTATCTTGGA-TCTT 1301 Query 64361 TGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGT 64419 ||||| || || | || || | || ||||| | || | |||||| || || Sbjct 1302 GGCTTTCACGTTATCAATCGTGTCCGAGCTCTCAACTTCGAGGGTGATGGTCTTACCAGT 1361 Query 64420 CAAAGTTTTTACGAAAATTTGCAT 64443 ||| || || || || || ||||| Sbjct 1362 CAAGGTCTTCACAAAGATCTGCAT 1385 >seq3667 Length=14967 Score = 95.1 bits (104), Expect = 1e-14 Identities = 143/201 (71%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || |||||||| || |||| ||||||| |||| || ||||| || ||| Sbjct 5525 GTAGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCCTCGAGCTGTTTCCCG 5584 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | || |||||||||||||| ||||| || ||||| || || || | | || ||||| Sbjct 5585 GCGAAGATCAGCCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGA-TCTTGGCTTT 5643 Query 64367 -ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGT 64425 ||| || | || || | || || || | || | ||||| || || | || Sbjct 5644 GACATTGTCGATGGTGTCGGAAGATTCGACCTCGAGGGTGATCGTCTTCCCCGTTAGGGT 5703 Query 64426 TTTTACGAAAATTTGCATTTT 64446 ||| ||||| || ||||| || Sbjct 5704 TTTCACGAAGATCTGCATCTT 5724 >seq1045 Length=26565 Score = 95.1 bits (104), Expect = 1e-14 Identities = 141/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || |||||||| || |||| ||||||| |||| || ||||| || ||| Sbjct 2822 GTAGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCCTCGAGCTGTTTCCCG 2881 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | || |||||||||||||| ||||| || ||||| || || || || || ||| Sbjct 2882 GCGAAGATCAGCCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTG 2941 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | || || || || || || | || | ||||| || || | ||| Sbjct 2942 ACGTTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATTGTCTTCCCCGTTAGGGTT 3001 Query 64427 TTTACGAAAATTTGCATTTT 64446 || ||||| || ||||| || Sbjct 3002 TTCACGAAGATCTGCATCTT 3021 >seq526 Length=33339 Score = 95.1 bits (104), Expect = 1e-14 Identities = 93/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294 || ||||| | || || ||||| || ||||||||||| || | ||| || |||||||| Sbjct 23182 ACGAGATGGAGAGTAGACTCTTTCTGGATGTTGTAATCGGCTAGGGTTCGGCCGTCTTCA 23123 Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354 |||||||| ||||| | ||||||| || ||||| || || || |||||||| || ||| Sbjct 23122 AGCTGCTTACCGGCGAAGATGAGCCTTTGTTGGTCCGGTGGTATACCTTCTTTGTCCTGT 23063 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499240512410080