Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raphanus_20raphanistrum_20subsp._20raphanistrum_20[genbank_20GCA_5F0 00769845.1_202014-10-28] 64,732 sequences; 253,833,977 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq3667 123 2e-23 seq25552 120 3e-22 seq1045 116 4e-21 seq549 109 5e-19 seq7912 107 2e-18 seq4396 102 8e-17 seq2054 102 8e-17 seq806 102 8e-17 seq1703 98.7 1e-15 seq964 98.7 1e-15 seq37186 96.9 3e-15 seq12662 95.1 1e-14 seq11485 93.3 4e-14 seq24793 89.7 5e-13 seq20570 87.8 2e-12 seq7348 87.8 2e-12 >seq3667 Length=14967 Score = 123 bits (136), Expect = 2e-23 Identities = 146/195 (75%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | || ||| ||||||||| ||||| |||| Sbjct 5528 GACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCCTCGAGCTGTTTCCCGGCG 5587 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| || ||||| ||||||||||| || ||||| ||||| ||| || ||| | | Sbjct 5588 AAGATCAGCCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCTTTGACA 5647 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | |||||||| || || ||||||| || | ||| || || || || ||||| Sbjct 5648 TTG-TCGATGGTGTCGGAAGATTCGACCTCGAGGGTGATCGTCTTCCCCGTTAGGGTTTT 5706 Query 138600 TACAAAAATCTGCAT 138614 || || |||||||| Sbjct 5707 CACGAAGATCTGCAT 5721 >seq25552 Length=2169 Score = 120 bits (132), Expect = 3e-22 Identities = 144/192 (75%), Gaps = 3/192 (2%) Strand=Plus/Minus Query 138425 CCTTT-TGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAG 138483 ||||| || ||||||||||| || |||||| || ||||| |||||||||| || Sbjct 435 CCTTTCTGGATGTTGTAGTCAGCCAAAGTACGGCCATCTTCGAGCTGTTTACCGGCGAAG 376 Query 138484 ATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTG 138542 || |||||||| || |||||||| |||||||||||||| ||| || ||| | |||| Sbjct 375 ATCAGACGCTGCTGATCCGGAGGGATACCTTCTTTGTCTTGGATCTTGGCTTTGACATTG 316 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | |||||||| ||||| || |||| || | || || || || || ||||| || Sbjct 315 -TCGATGGTGTCGGAGGACTCGACTTCGAGAGTGATGGTCTTGCCCGTTAGGGTTTTCAC 257 Query 138603 AAAAATCTGCAT 138614 || |||||||| Sbjct 256 GAAGATCTGCAT 245 >seq1045 Length=26565 Score = 116 bits (128), Expect = 4e-21 Identities = 142/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | || ||| ||||||||| ||||| |||| Sbjct 2825 GACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCCTCGAGCTGTTTCCCGGCG 2884 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||| ||||||||||| || ||||| ||||| ||| || || | Sbjct 2885 AAGATCAGCCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTGACG 2944 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||||| ||||| ||||||| || | || || || || || ||||| Sbjct 2945 TTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATTGTCTTCCCCGTTAGGGTTTTC 3004 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 3005 ACGAAGATCTGCAT 3018 >seq549 Length=32968 Score = 109 bits (120), Expect = 5e-19 Identities = 402/615 (65%), Gaps = 20/615 (3%) Strand=Plus/Plus Query 52230 ATCGAGTGCGTGCACACGGAGATGTACAATCTGCTCATTGAGCAGCTG-ATAAAAGATGA 52288 |||||| | | ||| | |||||||||| ||| ||| | || || | || ||||| | Sbjct 20023 ATCGAGAACATCCACTCCGAGATGTACAGTCTCCTCTTAGA-CACTTACATCAAAGACAA 20081 Query 52289 GCACGAGCGCGACACGCTGCTGAATGCGTTCGAGCACG-TGCCGTGCGTTCGCAAAAAGG 52347 | ||| | ||| || | ||| ||||| ||| | || ||||| ||||||| Sbjct 20082 CAAGGAGAGGGACCATCTCTTCCGCGCGATCGAG-ACGATCCCTTGCGTAAAGAAAAAGG 20140 Query 52348 CTCAGTGGGCAATGAAGTGGATCGA-GAGCGACACCGCCACGCTGGCCGAGCGCATGGTG 52406 | || ||||| ||||||||||||| | || || ||| | |||||| | || ||| Sbjct 20141 CCCAATGGGCCTTGAAGTGGATCGATGGGCCTCA-GGCC---TTCGCCGAGAGGATCGTG 20196 Query 52407 GCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTTACATT 52466 || ||||| || || || | || || || |||||||| | | ||||| | | Sbjct 20197 GCGTTCGCTTGCGTGGAAGGGATCTTCTTCTCGGGCAGCTTCTGCTCGATCTTCTGGCTG 20256 Query 52467 AAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGACGAA 52526 || | | || | ||||| || || || ||| ||||||| |||| ||| | |||||| Sbjct 20257 AAGAAGCGTGGGCTCATGCCGGGTCTCACCTTCTCCAACGAGCTGATCTCGAGAGACGAA 20316 Query 52527 GGACTGCACACGGACTTTGCGTGCCTCTACTACAAGACGCGCGTGACCGAAAAATTGGAT 52586 || || ||| ||||| |||||||| |||| | | | | | || || | Sbjct 20317 GGCCTCCACTGCGACTTCGCGTGCCTGATCTAC---TCCCTCCTTA-GGACGAA--GCTC 20370 Query 52587 TCGGACACGATCCTGAGCATGTTCAAG---GAGGCGGTGGCTATCGAAAAGGAGTTTTTT 52643 ||||| | | |||| | || | || ||||||| ||||| | ||||||| | Sbjct 20371 TCGGAGGAGCGCGTGAGGTCGATCGTGTGCGACGCGGTGGAGATCGAGAGGGAGTTTGTG 20430 Query 52644 ACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCGAGTACATC 52703 | |||||| ||| || | || |||| |||||| | ||| ||| | |||| || Sbjct 20431 TGCGACGCGCTCCCGTGCGCGTTGGTGGGGATGAACCGGGAGTTGATGAGTCAGTATATT 20490 Query 52704 GAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCAAAGTACTTCAACGCTCGC 52763 ||||| ||||||||| | || |||| | ||||||| ||| | | | | || Sbjct 20491 GAGTTCGTGGCGGATAGGCTTTTGGGGGCGCTCGGGTGCGGGAAGGTGTACGGTG-TGGC 20549 Query 52764 -AATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGAGAA 52822 ||||| ||||| | ||| | || |||||| |||| || || || || |||||||| Sbjct 20550 GAATCCTTTTGATTGGATGGAGTTGATCTCGCTTCAGGGTAAAACGAATTTCTTCGAGAA 20609 Query 52823 GCGAGTCGGCGAGTA 52837 | | || || || || Sbjct 20610 GAGGGTTGGTGATTA 20624 >seq7912 Length=9007 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || |||| |||||| || || || | | ||||||||||| |||||||||||| Sbjct 6335 GCCTCCACGCAGACGCAACACCAAGTGAAGTGTGGACTCCTTTTGGATGTTGTAGTCGGC 6394 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || || ||||| || ||||| || | |||| || | ||| ||||||||||| Sbjct 6395 TAAGGTGCGACCATCCTCAAGCTGTTTCCCAGCGAAGATGAGCCTCTGCTGGTCCGGAGG 6454 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 ||||| || ||||| ||| || || | | || | |||||||| ||| || Sbjct 6455 GATACCCTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCAAC 6514 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||| | || | || || ||||||| ||| || ||||| ||||||||| Sbjct 6515 CTCCAAAGTAATGGTCTTTCCAGTCAAAGTCTTGACAAAGATCTGCATG 6563 Score = 100 bits (110), Expect = 3e-16 Identities = 163/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | |||||| || || || | | ||||||||||| || ||||||||| Sbjct 6108 CCACCACGAAGACGCAACACCAAGTGAAGTGTGGACTCCTTTTGGATATTGTAGTCGGCT 6167 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||||| || || || || | |||| |||||||| ||||||||||| Sbjct 6168 AAGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 6227 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 |||||||| || || ||| || || | |||| || | |||||| | |||||| Sbjct 6228 ATACCTTCCTTATCCTGGATCTTGGCCTTGACATTG-TCAATGGTGTCAGAGCTCTCCAC 6286 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGCT 138618 ||| | ||| | || || || || || || || ||||| ||||||||| || Sbjct 6287 CTCCAACGTGATGGTCTTGCCGGTAAGTGTCTTGACAAAGATCTGCATGCCT 6338 Score = 87.8 bits (96), Expect = 2e-12 Identities = 139/196 (71%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||||||||| ||||||||||| || || | ||| ||||| || || |||| Sbjct 6597 GACTCCTTTTGGATGTTGTAGTCTGCCAATGTTCTGCCGTCTTCGAGCTGCTTGCCGGCG 6656 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 |||| || | ||| || || ||||| |||||||| ||||| ||| | || | ||| | Sbjct 6657 AAGATGAGCCTCTGCTGATCGGGAGGGATACCTTCCTTGTC-CTGAATCTTGGCTTTGAC 6715 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 ||| || | ||||||| |||||||||| || | || || || || ||||| | Sbjct 6716 GTTG-TCGATTGTGTCGGAGCTTTCCACCTCGAGGGTGATGGTCTTTCCCGTGAGAGTCT 6774 Query 138599 TTACAAAAATCTGCAT 138614 | || || |||||||| Sbjct 6775 TAACGAAGATCTGCAT 6790 >seq4396 Length=13502 Score = 102 bits (112), Expect = 8e-17 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| ||| || || || || | | ||||||| || ||||||||||| || | Sbjct 12717 CCACCACGCAGACGTAACACCAAGTGAAGGGTTGACTCTTTCTGAATGTTGTAATCAGCC 12658 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||||| || || || || | |||| |||||||| |||||||| || Sbjct 12657 AAGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGG 12598 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 || || || ||||| ||| | || | || | ||| || | |||||||| ||||| Sbjct 12597 ATCCCCTCCTTGTC-CTGAATCTTGGCCTTGACGTTG-TCAATGGTGTCGGAGCTCTCCA 12540 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| | || | || || || ||||| || || |||||||||||||| Sbjct 12539 CCTCCAAAGTGATAGTCTTCCCGGTCAGTGTCTTAACAAAAATCTGCAT 12491 Score = 96.9 bits (106), Expect = 3e-15 Identities = 141/196 (72%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||| ||||| ||||||||||| | ||||||| || || ||||| || |||| Sbjct 12024 GACTCTTTTTGGATGTTGTAGTCAGCGAGAGTACGCCCATCTTCAAGTTGCTTCCCGGCG 11965 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 |||| || | ||| || ||||| || || ||||| ||||| ||| | || | ||||| Sbjct 11964 AAGATAAGCCTCTGCTGATCCGGGGGAATGCCTTCCTTGTC-CTGAATCTTGGCTTTAAC 11906 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 ||| || | |||||| | |||||||||| || | ||| || || || ||||| | Sbjct 11905 GTTG-TCGATGGTGTCTGAGCTTTCCACCTCGAGGGTGATCGTCTTTCCGGTGAGAGTCT 11847 Query 138599 TTACAAAAATCTGCAT 138614 | || || |||||||| Sbjct 11846 TAACGAATATCTGCAT 11831 >seq2054 Length=20018 Score = 102 bits (112), Expect = 8e-17 Identities = 140/192 (73%), Gaps = 3/192 (2%) Strand=Plus/Plus Query 138425 CCTTT-TGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAG 138483 ||||| || ||||||||||| || |||||| || ||||| |||||||||| || Sbjct 3203 CCTTTCTGGATGTTGTAGTCAGCCAAAGTACGGCCATCTTCGAGCTGTTTACCGGCGAAG 3262 Query 138484 ATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTG 138542 || | | ||| || || ||||| |||||||||||||| ||| || || | |||| Sbjct 3263 ATCAATCTCTGCTGATCTGGAGGGATACCTTCTTTGTCTTGGATCTTGGCCTTGACATTG 3322 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | |||||||| ||||| ||||||| || | || || || || || ||||| || Sbjct 3323 -TCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTTCCGGTTAGGGTTTTCAC 3381 Query 138603 AAAAATCTGCAT 138614 || |||||||| Sbjct 3382 GAAGATCTGCAT 3393 >seq806 Length=29032 Score = 102 bits (112), Expect = 8e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | || || ||| ||||| || || |||| Sbjct 17983 GACTCCTTCTGGATGTTGTAGTCGGCGAGTGTGCGGCCGTCTTCGAGCTGCTTCCCGGCG 18042 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||| |||||||| || || ||||| ||||| ||| || || | Sbjct 18043 AAGATCAGTCGCTGCTGGTCCGGCGGGATCCCTTCCTTGTCCTGGATCTTGGCCTTGACG 18102 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||||| ||||| ||||||| || | ||| || || || || ||||| Sbjct 18103 TTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTTATCGTCTTCCCCGTTAGGGTTTTC 18162 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 18163 ACGAAGATCTGCAT 18176 >seq1703 Length=21771 Score = 98.7 bits (108), Expect = 1e-15 Identities = 161/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || || | ||| || || || || | | | ||||| || ||||||||||| || Sbjct 18139 GCCACCACGGAGACGTAACACCAAGTGAAGGGTCGACTCTTTCTGAATGTTGTAATCAGC 18198 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || || || |||||||| || || || | | || || | ||| ||||||||||| Sbjct 18199 CAAGGTGCGACCATCCTCGAGCTGCTTCCCAGCGAATATCAGCCTCTGCTGGTCCGGAGG 18258 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 ||||| |||||||| |||||| ||| | | || | |||||||| |||||| Sbjct 18259 GATACCCTCTTTGTCTTGGATTTTCGCTTTCACGTTGTCAATGGTGTCGGAACTCTCCAC 18318 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGCT 138618 ||| | || | ||| || || |||| || || || || ||||||||| || Sbjct 18319 CTCTAAAGTGATCGTCTTTCCTGTCAACGTCTTAACGAAGATCTGCATGCCT 18370 >seq964 Length=27231 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | | ||| | ||| | | |||||||| || || ||||| ||| | Sbjct 9719 CCACCTCTCAACCTGAGAACGAGATGGAGAGTCGACTCCTTCTGGATATTGTAATCGGCC 9660 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| |||||||| |||||||||| |||| || | ||| ||||||||||| Sbjct 9659 AAGGTACGTCCATCCTCGAGCTGTTTACCGGCGAAGATGAGCCTCTGCTGGTCCGGAGGA 9600 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 |||||||| ||||| ||| || || | | || | ||| |||| ||| || Sbjct 9599 ATACCTTCCTTGTCCTGGATCTTAGCCTTGACGTTATCGATGGTATCGGAGCTCTCGACT 9540 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| || | || || || || |||||||| || ||||| ||||| Sbjct 9539 TCGAGAGTGATGGTCTTGCCGGTGAGAGTTTTCACGAAAATTTGCAT 9493 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/195 (70%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTC-GCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGA 138479 ||||| || |||||||||||||| ||| | || || ||||| || || ||||||| Sbjct 10142 GACTCTTTCTGAATGTTGTAGTCAGCT-AGCGTGCGTCCATCCTCCAGCTGCTTACCGGC 10084 Query 138480 ATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA 138539 | |||| || | ||| |||||||| || ||||| ||||| || ||| || || | Sbjct 10083 AAAGATGAGCCTCTGCTGGTCCGGTGGGATACCCTCTTTATCCTGGATCTTAGCCTTGAC 10024 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | || | |||||| | ||| ||||| | || | |||||||| || || || || Sbjct 10023 GTTGTCAATGGTGTCTGAGCTCTCAACCTCCAAAGTGATGGTTTTACCGGTGAGGGTCTT 9964 Query 138600 TACAAAAATCTGCAT 138614 ||||| || ||||| Sbjct 9963 GACAAAGATTTGCAT 9949 Score = 82.4 bits (90), Expect = 8e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | |||||| || | || | | | |||||||| || || ||||| || Sbjct 10403 CCACCACGGAGACGCAACACAAGGTGAAGGGTCGACTCCTTCTGGATATTGTAATCTGCA 10344 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| ||||| || ||||| || | |||| || | ||| |||||||| || Sbjct 10343 AGCGTACGACCATCCTCAAGCTGTTTCCCAGCGAAGATGAGTCTCTGCTGGTCCGGTGGG 10284 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGT-TCCACGGTGTCGGTCGACTCCAC 138566 || ||||| ||||| ||| | || | || | | || | ||||| | |||||| Sbjct 10283 ATCCCTTCCTTGTCC-TGAATCTTAGCCTTGACGTTATCGATCGTGTCAGAGCTCTCCAC 10225 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||| | || | ||||| ||||| || || || ||||||||||||||| Sbjct 10224 CTCCAAAGTGATGGTTTTGCCAGTGAGGGTCTTCACAAAAATCTGCATG 10176 >seq37186 Length=985 Score = 96.9 bits (106), Expect = 3e-15 Identities = 141/196 (72%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||| ||||| ||||||||||| || || | |||||| | ||||| |||| Sbjct 473 GACTCTTTTTGGATGTTGTAGTCAGCCAATGTTCTGCCGTCCTCCAACTGTTTCCCGGCG 532 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 |||| || | ||| || || ||||| ||||| |||||||| ||| | || | ||||| Sbjct 533 AAGATAAGCCTCTGCTGATCGGGAGGGATACCCTCTTTGTC-CTGAATCTTGGCTTTAAC 591 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 ||| || | |||||||| |||||||||| || | ||| || ||||| ||||| | Sbjct 592 GTTG-TCGATGGTGTCGGAGCTTTCCACCTCGAGGGTGATCGTCTTCCCAGTGAGAGTCT 650 Query 138599 TTACAAAAATCTGCAT 138614 | || || || ||||| Sbjct 651 TAACGAAGATTTGCAT 666 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/195 (70%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| || || | ||| || || || || |||| Sbjct 16 GACTCCTTCTGGATGTTGTAGTCCGCCAATGTTCTGCCGTCTTCAAGCTGCTTGCCGGCG 75 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| | | ||| ||||||||||| ||||| || ||||| ||| || ||| | | Sbjct 76 AAGATCAACCTCTGCTGGTCCGGAGGGATACCCTCCTTGTCTTGGATCTTAGCTTTGACA 135 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | |||||||| ||||||||| | || | || || || |||| || || Sbjct 136 TTG-TCAATGGTGTCGGAGCTCTCCACCTCCAAAGTAATGGTCTTGCCGGTCAATGTCTT 194 Query 138600 TACAAAAATCTGCAT 138614 || ||||||||||| Sbjct 195 AACGAAAATCTGCAT 209 >seq12662 Length=5898 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | |||||| || || || ||| |||||||||| || |||||||||||| Sbjct 3943 CCACCACGGAGACGCAACACCAAGTGAATGGTTGACTCCTTCTGGATGTTGTAGTCGGCA 3884 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||||| || || || || | |||| |||||||| ||||| ||||| Sbjct 3883 AGGGTGCGACCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGG 3824 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||| || || ||| || ||| | | || | ||||| | ||| || Sbjct 3823 ATGCCTTCCTTATCTTGGATCTTGGCTTTCACGTTATCAATCGTGTCCGAGCTCTCAACT 3764 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| || | || |||||||||| || || || || |||||||| Sbjct 3763 TCGAGGGTGATGGTCTTACCAGTCAAGGTCTTCACGAAGATCTGCAT 3717 Score = 89.7 bits (98), Expect = 5e-13 Identities = 149/212 (70%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 138405 AACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTC 138464 ||| | ||| | | | |||||||| || |||||||| || | ||| | |||||| Sbjct 3470 AACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAATCAGCGAGAGTCCTGCCGTCCTC 3411 Query 138465 GAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGT 138524 ||| || || |||| |||| || | ||| || ||||| || || || || ||||| | Sbjct 3410 GAGCTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGGGGAATGCCCTCCTTGTCC-T 3352 Query 138525 GATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTT 138582 || | || | ||||| |||| | | |||||| | |||||||||| || | || Sbjct 3351 GAATCTTGGCTTTAACGTTGT-CGATGGTGTCTGAGCTTTCCACCTCGAGGGTGATTGTC 3293 Query 138583 TTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || || || ||||| || |||||||||||||| Sbjct 3292 TTTCCCGTGAGAGTCTTAACAAAAATCTGCAT 3261 >seq11485 Length=6519 Score = 93.3 bits (102), Expect = 4e-14 Identities = 139/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| ||||| ||||| || | || || ||||| || |||||||| | Sbjct 4899 GACTCCTTCTGAATATTGTAATCCGCAAGCGTGCGTCCATCCTCAAGCTGTTTACCAGCG 4840 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| || | ||| ||||||||||| || ||||| ||||| ||| ||| ||| | | Sbjct 4839 AAGATGAGTCTCTGCTGGTCCGGAGGAATTCCTTCCTTGTCCTGGATCTTTGCTTTCACA 4780 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 |||| | | ||||||| ||| ||||| | || | || || || |||| ||| || Sbjct 4779 TTGT-CAATAGTGTCGGAGCTCTCAACCTCCAAAGTGATGGTCTTGCCTGTCAAAGTCTT 4721 Query 138600 TACAAAAATCTGCAT 138614 |||||||||||||| Sbjct 4720 GACAAAAATCTGCAT 4706 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | ||| || || | | |||||||| || |||||||| || | Sbjct 5160 CCACCACGAAGACGAAGAACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCAGCC 5101 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || |||||||| ||||| || | |||| || | ||| ||||||||||| Sbjct 5100 AAAGTCCGACCATCCTCGAGCTGTTTCCCAGCGAAGATGAGTCTCTGCTGGTCCGGAGGG 5041 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTT--AATTGTTCCACGGTGTCGGTCGACTCCA 138565 || ||||| ||||| ||| | || | ||| |||| || | ||||| | ||||| Sbjct 5040 ATGCCTTCCTTGTC-CTGAATCTTCGCTTTCACATTG-TCGATCGTGTCAGAGCTCTCCA 4983 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | || | || | |||||||| || || || || || ||||||||||| Sbjct 4982 CTTCAAGGGTAATGGTTTTACCGGTGAGTGTCTTGACGAAAATCTGCAT 4934 >seq24793 Length=2311 Score = 89.7 bits (98), Expect = 5e-13 Identities = 149/212 (70%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 138405 AACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTC 138464 ||| | ||| | | | |||||||| || |||||||| || | ||| | |||||| Sbjct 1632 AACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAATCAGCGAGAGTCCTGCCGTCCTC 1691 Query 138465 GAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGT 138524 ||| || || |||| |||| || | ||| || ||||| || || || || ||||| | Sbjct 1692 GAGCTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGGGGAATGCCCTCCTTGTCC-T 1750 Query 138525 GATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTT 138582 || | || | ||||| |||| | | |||||| | |||||||||| || | || Sbjct 1751 GAATCTTGGCTTTAACGTTGT-CGATGGTGTCTGAGCTTTCCACCTCGAGGGTGATTGTC 1809 Query 138583 TTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || || || ||||| || |||||||||||||| Sbjct 1810 TTTCCCGTGAGAGTCTTAACAAAAATCTGCAT 1841 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| || || | ||| || || || || |||| Sbjct 1420 GACTCCTTCTGGATGTTGTAGTCCGCCAATGTTCTGCCGTCTTCAAGCTGCTTGCCGGCG 1479 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| | | ||| ||||||||||| ||||| || ||||| ||| ||| ||| | Sbjct 1480 AAGATCAACCTCTGCTGGTCCGGAGGGATACCCTCCTTGTCTTGGATCTTTGCTTTGACG 1539 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||||| ||||||||| | || | ||| || || |||| || || Sbjct 1540 TTGTCGATGGTGTCGGAGCTCTCCACCTCTAGGGTAATCGTCTTTCCCGTCAAGGTCTTA 1599 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 1600 ACGAAGATCTGCAT 1613 >seq20570 Length=3172 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | |||||| || || || | | | |||||||| || ||||||||||| | Sbjct 292 CCACCACGTAGACGCAACACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCC 351 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || | | |||||| | || || || | |||| || | ||| || |||||||| Sbjct 352 AAGGTTCTCCCGTCCTCCAACTGCTTTCCTGCGAAGATAAGCCTCTGCTGATCCGGAGGA 411 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 || ||||| ||||| || | || | |||| ||| || | |||||| | |||| Sbjct 412 ATCCCTTCCTTGTC-CTGGATCTTGGCCTTAACGTTG-TCGATGGTGTCAGAGCTTTCCA 469 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||||| || | || || || || |||||||| || || |||||||| Sbjct 470 CCTCGAGGGTGATTGTCTTTCCTGTGAGAGTTTTCACGAAGATCTGCAT 518 >seq7348 Length=9517 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTC-GCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGA 138479 |||||||| || ||||||||||| ||| | || || ||||| || || || || | Sbjct 418 GACTCCTTCTGGATGTTGTAGTCTGCT-AAGGTGCGACCATCCTCAAGCTGCTTTCCAGC 360 Query 138480 ATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA 138539 |||| |||||||| || |||||||| || ||||| ||||| ||| || |||| Sbjct 359 GAAGATGAGACGCTGCTGATCCGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTTAC 300 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | || | |||||| | ||||||||| | || | || |||||||||| || || Sbjct 299 GTTGTCAATGGTGTCAGAGCTCTCCACCTCAAGTGTGATGGTCTTACCAGTCAAGGTCTT 240 Query 138600 TACAAAAATCTGCAT 138614 || || |||||||| Sbjct 239 CACGAATATCTGCAT 225 Score = 86.0 bits (94), Expect = 6e-12 Identities = 133/190 (70%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | ||| || |||||||| || || || | Sbjct 190 GACTCCTTCTGGATGTTGTAGTCGGCAAGAGTGCGACCATCCTCGAGCTGCTTTCCAGCG 131 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| |||||||| ||||||||||| |||||||| ||||| ||| || || | Sbjct 130 AAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTGTCCTGGATCTTAGCCTTCACG 71 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||||| ||| || || | || | || || || || ||||| || Sbjct 70 TTGTCAATGGTGTCGGAGCTCTCAACTTCCAATGTGATGGTCTTGCCGGTAAGAGTCTTC 11 Query 138601 ACAAAAATCT 138610 || || |||| Sbjct 10 ACGAAGATCT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495860849279040