Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raphanus_20raphanistrum_20subsp._20raphanistrum_20[genbank_20GCA_5F0 00769845.1_202014-10-28] 64,732 sequences; 253,833,977 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq1703 152 5e-32 seq4396 143 3e-29 seq7912 138 1e-27 seq11485 132 5e-26 seq964 131 2e-25 seq12662 125 7e-24 seq20570 120 3e-22 seq7348 109 5e-19 seq24793 105 6e-18 seq37186 102 8e-17 seq25552 100 3e-16 seq3737 93.3 4e-14 seq549 89.7 5e-13 seq13321 82.4 7e-11 >seq1703 Length=21771 Score = 152 bits (168), Expect = 5e-32 Identities = 172/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 || || |||| ||||| ||||| || | ||||||||| || || |||||||||||| || Sbjct 18824 CCTCCACGTAGACGCAAGACCAAGTGAAGCGTAGACTCCTTCTGGATATTGTAATCGGCC 18883 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || ||||| ||||| ||| |||| | ||||||||||| ||||| Sbjct 18884 AAGGTGCGACCATCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGAGGG 18943 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || ||||||||| ||| || || | |||| |||| |||||| | || || || Sbjct 18944 ATCCCTTCCTTGTCCTGGATCTTGGCTTTCACGTTG-TCGATGGTGTCGGAGCTTTCCAC 19002 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| ||| | || || ||||| |||||||| || || || ||||| Sbjct 19003 CTCGAGGGTGATTGTCTTCCCGGTGAGAGTTTTCACGAAGATTTGCAT 19050 Score = 127 bits (140), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | || ||||| || || |||||||| || || Sbjct 17912 CCACCACGGAGACGGAGGACCAAGTGAAGAGTCGACTCCTTCTGGATATTGTAGTCTGCC 17971 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || ||||| ||||||||| |||| | ||||||||||| ||||| Sbjct 17972 AAGGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCCGGAGGG 18031 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || ||||||||| ||| || ||| | |||| || | ||||| | ||||| || Sbjct 18032 ATACCTTCCTTGTCCTGGATCTTAGCCTTCACGTTG-TCAATAGTGTCAGAGCTCTCAAC 18090 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || | || | || || ||||| ||||| || ||||| ||||||||| Sbjct 18091 CTCCAATGTGATAGTCTTCCCGGTAAGAGTCTTGACAAAGATCTGCATG 18139 >seq4396 Length=13502 Score = 143 bits (158), Expect = 3e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || |||||||| || | || |||||||| ||||| |||||||| || Sbjct 12717 CCACCACGCAGACGTAACACCAAGTGAAGGGTTGACTCTTTCTGAATGTTGTAATCAGCC 12658 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || ||||| || |||||| |||| | |||||||| || || || Sbjct 12657 AAGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGG 12598 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || |||||||||||| || || ||||| ||||| | | |||||| | ||||| || Sbjct 12597 ATCCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGT-CAATGGTGTCGGAGCTCTCCAC 12539 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || || |||||||| || || |||||||||||||| Sbjct 12538 CTCCAAAGTGATAGTCTTCCCGGTCAGTGTCTTAACAAAAATCTGCAT 12491 Score = 136 bits (150), Expect = 4e-27 Identities = 169/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 ||| || || | ||||||||||| || | |||||||| || || || || || || | Sbjct 329 TCCTCCACGCAGACGCAACACCAAGTGAAGTGTAGACTCCTTCTGGATGTTATAGTCAGC 270 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 || |||||| ||| || ||||| || |||||| |||| | |||||||| || || || Sbjct 269 CAAGGTGCGACCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGTGG 210 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGA 127064 || |||||||||||| || || ||||| |||| || | |||||| | ||||| | Sbjct 209 GATTCCCTCCTTGTCCTGAATCTTAGCCTTGACGTTG-TCAATGGTGTCGGAGCTCTCAA 151 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||||| ||| | || || ||||| || || || ||||| |||||||| Sbjct 150 CTTCGAGGGTGATTGTCTTTCCGGTTAGTGTCTTGACAAAGATCTGCAT 102 Score = 105 bits (116), Expect = 6e-18 Identities = 145/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||||||||| || ||||| || | | || || ||| || || || || || Sbjct 12027 GTCGACTCTTTTTGGATGTTGTAGTCAGCGAGAGTACGCCCATCTTCAAGTTGCTTCCCG 11968 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | | ||||||||| || || ||||| ||||||||| ||| | | |||| Sbjct 11967 GCGAAGATAAGCCTCTGCTGATCCGGGGGAATGCCTTCCTTGTCC-TGAATCTTGGCTTT 11909 Query 127037 A--GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAG 127094 | |||| |||| |||||| | || || || |||| ||| | ||| || ||||| |||| Sbjct 11908 AACGTTG-TCGATGGTGTCTGAGCTTTCCACCTCGAGGGTGATCGTCTTTCCGGTGAGAG 11850 Query 127095 TTTTTACAAAAATCTGCAT 127113 | || || || |||||||| Sbjct 11849 TCTTAACGAATATCTGCAT 11831 Score = 91.5 bits (100), Expect = 1e-13 Identities = 79/98 (81%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| |||| || ||||||||||| | || |||||||||||||| |||||||| || Sbjct 100 CCACCACGTAGACGTAACACCAAATGAAGAGTCGACTCTTTTTGAATGTTGTAATCTGCC 41 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGAT 126984 | |||||| ||| || ||||| ||||||||| |||| Sbjct 40 AAAGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGAT 3 >seq7912 Length=9007 Score = 138 bits (152), Expect = 1e-27 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | ||||||||||| || | || ||||| ||||| |||||||| ||| | Sbjct 6108 CCACCACGAAGACGCAACACCAAGTGAAGTGTGGACTCCTTTTGGATATTGTAGTCGGCT 6167 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || ||||| || |||||| |||| | |||||||| || ||||| Sbjct 6168 AAGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 6227 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || || ||||| ||| ||| || ||||| | || | |||||| | ||||| || Sbjct 6228 ATACCTTCCTTATCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCAGAGCTCTCCACC 6287 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117 || | || | || |||||||| || || || ||||| ||||||||| || Sbjct 6288 TCCAACGTGATGGTCTTGCCGGTAAGTGTCTTGACAAAGATCTGCATGCCT 6338 Score = 132 bits (146), Expect = 5e-26 Identities = 161/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 ||||||||||| || | || ||||| ||||| || ||||| ||| | | |||||| | Sbjct 6348 CGCAACACCAAGTGAAGTGTGGACTCCTTTTGGATGTTGTAGTCGGCTAAGGTGCGACCA 6407 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || |||||||| |||||| |||| | | |||||| || ||||| || ||||||||| Sbjct 6408 TCCTCAAGCTGTTTCCCAGCGAAGATGAGCCTCTGCTGGTCCGGAGGGATACCCTCCTTG 6467 Query 127019 TCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077 || ||| || ||||| |||| || | |||||| | ||||| || || | || | Sbjct 6468 TCTTGGATCTTGGCCTTGACGTTG-TCAATGGTGTCGGAGCTCTCAACCTCCAAAGTAAT 6526 Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || || || |||| ||| || ||||| ||||||||| Sbjct 6527 GGTCTTTCCAGTCAAAGTCTTGACAAAGATCTGCATG 6563 Score = 100 bits (110), Expect = 3e-16 Identities = 149/206 (72%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 126910 ATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTG 126969 ||| | ||||||||| ||||| || ||||| || ||| || | || || ||||| Sbjct 6587 ATGAAGCGTAGACTCCTTTTGGATGTTGTAGTCTGCCAATGTTCTGCCGTCTTCGAGCTG 6646 Query 126970 TTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTT 127029 || || ||| |||| | | ||||||||||||||| || || ||||||||| ||| | | Sbjct 6647 CTTGCCGGCGAAGATGAGCCTCTGCTGATCGGGAGGGATACCTTCCTTGTCC-TGAATCT 6705 Query 127030 CTGC-TTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCG 127087 || |||| |||| |||| ||||| | || || || |||| ||| | || || || Sbjct 6706 TGGCTTTGACGTTG-TCGATTGTGTCGGAGCTTTCCACCTCGAGGGTGATGGTCTTTCCC 6764 Query 127088 GTCAGAGTTTTTACAAAAATCTGCAT 127113 || ||||| || || || |||||||| Sbjct 6765 GTGAGAGTCTTAACGAAGATCTGCAT 6790 >seq11485 Length=6519 Score = 132 bits (146), Expect = 5e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| || | || | ||||| || | |||||||| || || || |||||||| | Sbjct 5161 TCCACCACGAAGACGAAGAACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCAGC 5102 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 || || ||| ||| || |||||||| |||||| |||| | || |||||| || ||||| Sbjct 5101 CAAAGTCCGACCATCCTCGAGCTGTTTCCCAGCGAAGATGAGTCTCTGCTGGTCCGGAGG 5042 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||| ||||||||| || ||| || | | |||| ||||| | ||||| || Sbjct 5041 GATGCCTTCCTTGTCCTGAATCTTCGCTTTCACATTGTCGATCGTGTCAGAGCTCTCCAC 4982 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| | ||| | ||||| ||||| || || || || ||||||||||| Sbjct 4981 TTCAAGGGTAATGGTTTTACCGGTGAGTGTCTTGACGAAAATCTGCAT 4934 Score = 129 bits (142), Expect = 6e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | || | ||| | ||||||||| || |||||||||||||| | Sbjct 4932 CCACCACGGAGACGGAGGACGAGATGAAGCGTAGACTCCTTCTGAATATTGTAATCCGCA 4873 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || |||||||| |||||| |||| | || |||||| || ||||| Sbjct 4872 AGCGTGCGTCCATCCTCAAGCTGTTTACCAGCGAAGATGAGTCTCTGCTGGTCCGGAGGA 4813 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTG-AGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || ||||||||| ||| || ||||| | | || | ||||| | ||||| || Sbjct 4812 ATTCCTTCCTTGTCCTGGATCTT-TGCTTTCACATTGTCAATAGTGTCGGAGCTCTCAAC 4754 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || ||||| |||| ||| || |||||||||||||| Sbjct 4753 CTCCAAAGTGATGGTCTTGCCTGTCAAAGTCTTGACAAAAATCTGCAT 4706 >seq964 Length=27231 Score = 131 bits (144), Expect = 2e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || |||||||||||| ||| || || ||| || |||||||| || Sbjct 9689 GTCGACTCCTTCTGGATATTGTAATCGGCCAAGGTACGTCCATCCTCGAGCTGTTTACCG 9630 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | | |||||| || ||||| || || ||||||||| ||| || |||| Sbjct 9629 GCGAAGATGAGCCTCTGCTGGTCCGGAGGAATACCTTCCTTGTCCTGGATCTTAGCCTTG 9570 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| ||| || | ||||||||||||| || | || |||||||| |||||| Sbjct 9569 ACGTTATCGATGGTATCGGAGCTCTCGACTTCGAGAGTGATGGTCTTGCCGGTGAGAGTT 9510 Query 127097 TTTACAAAAATCTGCAT 127113 || || ||||| ||||| Sbjct 9509 TTCACGAAAATTTGCAT 9493 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||||||| | || | || ||||| || || ||||||||||| | Sbjct 10403 CCACCACGGAGACGCAACACAAGGTGAAGGGTCGACTCCTTCTGGATATTGTAATCTGCA 10344 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||| ||| ||| || |||||||| |||||| |||| | || |||||| || || || Sbjct 10343 AGCGTACGACCATCCTCAAGCTGTTTCCCAGCGAAGATGAGTCTCTGCTGGTCCGGTGGG 10284 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || || ||||||||| || || ||||| | |||| ||||| | ||||| || Sbjct 10283 ATCCCTTCCTTGTCCTGAATCTTAGCCTTGACGTTATCGATCGTGTCAGAGCTCTCCACC 10224 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || | || | |||||||| || || || || ||||||||||||||| Sbjct 10223 TCCAAAGTGATGGTTTTGCCAGTGAGGGTCTTCACAAAAATCTGCATG 10176 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | ||||| || | || | ||| ||||| || || || ||||| || | Sbjct 9947 CCACCACGAAGACGCAAGACAAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCAGCG 9888 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||||| ||| || ||||| || ||||| | || | | ||||||||| ||||| Sbjct 9887 AGCGTGCGACCATCCTCCAGCTGCTTACCAGCAAAAATAAGCCTCTGCTGATCCGGAGGG 9828 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||||||| ||| ||| ||||| | || | ||||| | ||||| || Sbjct 9827 ATGCCCTCCTTGTCCTGGATCTTCGCCTTGACATTGTCAATAGTGTCGGAGCTCTCAACC 9768 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || || || |||| ||| || || || |||||||| Sbjct 9767 TCCAGAGTGATGGTCTTTCCCGTCAAAGTCTTGACGAAGATCTGCAT 9721 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| | | ||| | ||| | ||| | |||||||||||| ||||| ||||| || | Sbjct 10175 CCACCTCTGAGTCGAAGCACAAGATGCAGCGTAGACTCTTTCTGAATGTTGTAGTCAGCT 10116 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || ||||| || || || |||| | | |||||| || || || Sbjct 10115 AGCGTGCGTCCATCCTCCAGCTGCTTACCGGCAAAGATGAGCCTCTGCTGGTCCGGTGGG 10056 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || ||||| || ||| ||| || ||||| |||| || | |||||| | ||||| || Sbjct 10055 ATACCCTCTTTATCCTGGATCTTAGCCTTGACGTTG-TCAATGGTGTCTGAGCTCTCAAC 9997 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | ||||| ||||| || || || ||||| || ||||| Sbjct 9996 CTCCAAAGTGATGGTTTTACCGGTGAGGGTCTTGACAAAGATTTGCAT 9949 >seq12662 Length=5898 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | ||||||||||| || || || ||||| || || || ||||| ||| | Sbjct 3943 CCACCACGGAGACGCAACACCAAGTGAATGGTTGACTCCTTCTGGATGTTGTAGTCGGCA 3884 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || ||||| ||||||||| |||| | |||||||| || ||||| Sbjct 3883 AGGGTGCGACCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGG 3824 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||| ||||| || ||| || || | | || | ||||||| ||||| ||| Sbjct 3823 ATGCCTTCCTTATCTTGGATCTTGGCTTTCACGTTATCAATCGTGTCCGAGCTCTCAACT 3764 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| ||| | || || || |||| || || || || |||||||| Sbjct 3763 TCGAGGGTGATGGTCTTACCAGTCAAGGTCTTCACGAAGATCTGCAT 3717 Score = 105 bits (116), Expect = 6e-18 Identities = 145/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || |||||||| | | || | || || ||||| ||||| Sbjct 3457 GTCGACTCCTTCTGGATGTTGTAATCAGCGAGAGTCCTGCCGTCCTCGAGCTGCTTTCCG 3398 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | | ||||||||| || || ||||||||||||||| ||| | | |||| Sbjct 3397 GCGAAGATAAGCCTCTGCTGATCCGGGGGAATGCCCTCCTTGTCC-TGAATCTTGGCTTT 3339 Query 127037 A--GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAG 127094 | |||| |||| |||||| | || || || |||| ||| | || || || || |||| Sbjct 3338 AACGTTG-TCGATGGTGTCTGAGCTTTCCACCTCGAGGGTGATTGTCTTTCCCGTGAGAG 3280 Query 127095 TTTTTACAAAAATCTGCAT 127113 | || |||||||||||||| Sbjct 3279 TCTTAACAAAAATCTGCAT 3261 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/199 (72%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 |||||||| || || || ||||| || | | || | || || ||||| || || Sbjct 3685 GTAGACTCCTTCTGGATGTTGTAGTCAGCGAGAGTTCTGCCGTCTTCAAGCTGCTTGCCT 3626 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGC-TT 127035 ||| ||||||| | |||||| || || || || ||||||||||| ||| || ||| || Sbjct 3625 GCGAAGATCAACCTCTGCTGGTCCGGTGGGATCCCCTCCTTGTCTTGGATCTT-TGCTTT 3567 Query 127036 GA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAG 127094 || |||| |||| |||||| | ||||| || || | ||| | ||| || || |||| | Sbjct 3566 GACGTTG-TCGATGGTGTCGGAGCTCTCCACCTCTAGGGTAATCGTCTTTCCCGTCAAGG 3508 Query 127095 TTTTTACAAAAATCTGCAT 127113 | || || || |||||||| Sbjct 3507 TCTTAACGAAGATCTGCAT 3489 >seq20570 Length=3172 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| |||| ||||||||||| || | |||||||| || || || ||||| || || Sbjct 292 CCACCACGTAGACGCAACACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCC 351 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || | || || | ||| ||||| ||| |||| | | ||||||||| ||||| Sbjct 352 AAGGTTCTCCCGTCCTCCAACTGCTTTCCTGCGAAGATAAGCCTCTGCTGATCCGGAGGA 411 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || ||||||||| ||| || ||| | |||| |||| |||||| | || || || Sbjct 412 ATCCCTTCCTTGTCCTGGATCTTGGCCTTAACGTTG-TCGATGGTGTCAGAGCTTTCCAC 470 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| ||| | || || || || |||||||| || || |||||||| Sbjct 471 CTCGAGGGTGATTGTCTTTCCTGTGAGAGTTTTCACGAAGATCTGCAT 518 >seq7348 Length=9517 Score = 109 bits (120), Expect = 5e-19 Identities = 151/209 (72%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 126906 CCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTA 126965 |||| || | || ||||| || || || ||||| || | | |||||| ||| || | Sbjct 432 CCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCTGCTAAGGTGCGACCATCCTCAA 373 Query 126966 GCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGA 127025 |||| ||||||||| |||| | ||||||||||| ||||| ||||| ||||||||| || Sbjct 372 GCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCCGGAGGGATGCCTTCCTTGTCCTGGA 313 Query 127026 TTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084 | || ||| | |||| || | |||||| | ||||| || || | || | || || Sbjct 312 TCTTGGCCTTTACGTTG-TCAATGGTGTCAGAGCTCTCCACCTCAAGTGTGATGGTCTTA 254 Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || |||| || || || || |||||||| Sbjct 253 CCAGTCAAGGTCTTCACGAATATCTGCAT 225 >seq24793 Length=2311 Score = 105 bits (116), Expect = 6e-18 Identities = 145/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || |||||||| | | || | || || ||||| ||||| Sbjct 1645 GTCGACTCCTTCTGGATGTTGTAATCAGCGAGAGTCCTGCCGTCCTCGAGCTGCTTTCCG 1704 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | | ||||||||| || || ||||||||||||||| ||| | | |||| Sbjct 1705 GCGAAGATAAGCCTCTGCTGATCCGGGGGAATGCCCTCCTTGTCC-TGAATCTTGGCTTT 1763 Query 127037 A--GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAG 127094 | |||| |||| |||||| | || || || |||| ||| | || || || || |||| Sbjct 1764 AACGTTG-TCGATGGTGTCTGAGCTTTCCACCTCGAGGGTGATTGTCTTTCCCGTGAGAG 1822 Query 127095 TTTTTACAAAAATCTGCAT 127113 | || |||||||||||||| Sbjct 1823 TCTTAACAAAAATCTGCAT 1841 Score = 102 bits (112), Expect = 8e-17 Identities = 145/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 |||||||| || || || ||||| || ||| || | || || ||||| || || Sbjct 1417 GTAGACTCCTTCTGGATGTTGTAGTCCGCCAATGTTCTGCCGTCTTCAAGCTGCTTGCCG 1476 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGC-TT 127035 ||| ||||||| | |||||| || ||||| || ||||||||||| ||| || ||| || Sbjct 1477 GCGAAGATCAACCTCTGCTGGTCCGGAGGGATACCCTCCTTGTCTTGGATCTT-TGCTTT 1535 Query 127036 GA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAG 127094 || |||| |||| |||||| | ||||| || || | ||| | ||| || || |||| | Sbjct 1536 GACGTTG-TCGATGGTGTCGGAGCTCTCCACCTCTAGGGTAATCGTCTTTCCCGTCAAGG 1594 Query 127095 TTTTTACAAAAATCTGCAT 127113 | || || || |||||||| Sbjct 1595 TCTTAACGAAGATCTGCAT 1613 >seq37186 Length=985 Score = 102 bits (112), Expect = 8e-17 Identities = 144/199 (72%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||||||||| || ||||| || ||| || | || || | |||||| || Sbjct 470 GTCGACTCTTTTTGGATGTTGTAGTCAGCCAATGTTCTGCCGTCCTCCAACTGTTTCCCG 529 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | | ||||||||||||||| || ||||| |||||| ||| | | |||| Sbjct 530 GCGAAGATAAGCCTCTGCTGATCGGGAGGGATACCCTCTTTGTCC-TGAATCTTGGCTTT 588 Query 127037 A--GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAG 127094 | |||| |||| |||||| | || || || |||| ||| | ||| || || || |||| Sbjct 589 AACGTTG-TCGATGGTGTCGGAGCTTTCCACCTCGAGGGTGATCGTCTTCCCAGTGAGAG 647 Query 127095 TTTTTACAAAAATCTGCAT 127113 | || || || || ||||| Sbjct 648 TCTTAACGAAGATTTGCAT 666 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 |||||||| || || || ||||| || ||| || | || || ||||| || || Sbjct 13 GTAGACTCCTTCTGGATGTTGTAGTCCGCCAATGTTCTGCCGTCTTCAAGCTGCTTGCCG 72 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| ||||||| | |||||| || ||||| || ||||||||||| ||| || ||| Sbjct 73 GCGAAGATCAACCTCTGCTGGTCCGGAGGGATACCCTCCTTGTCTTGGATCTTAGCTTTG 132 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | || | |||||| | ||||| || || | || | || |||||||||| || Sbjct 133 ACATTGTCAATGGTGTCGGAGCTCTCCACCTCCAAAGTAATGGTCTTGCCGGTCAATGTC 192 Query 127097 TTTACAAAAATCTGCAT 127113 || || ||||||||||| Sbjct 193 TTAACGAAAATCTGCAT 209 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/200 (71%), Gaps = 6/200 (3%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCA---TCGTGCGAGAATCGTCTAGCTGTTTT 126973 || ||||| ||||| || ||||| || | | || ||| || | || ||||| || Sbjct 241 GTTGACTCCTTTTGGATGTTGTAGTCAGCGAGAGTCCTGCC-GA--CCTCGAGCTGCTTG 297 Query 126974 CCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGC 127033 || || ||||||| | |||||| || || || || |||||||||||| || || | Sbjct 298 CCGGCAAAGATCAACCTCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGAATCTTAGCC 357 Query 127034 TTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGA 127093 |||| | |||| |||||||| ||||| || |||| || | || || ||||| || Sbjct 358 TTGACATTATCGATGGTGTCCGAGCTCTCCACCTCGAGAGTGATGGTCTTTCCGGTAAGG 417 Query 127094 GTTTTTACAAAAATCTGCAT 127113 || || || || |||||||| Sbjct 418 GTCTTGACGAAGATCTGCAT 437 >seq25552 Length=2169 Score = 100 bits (110), Expect = 3e-16 Identities = 136/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 126924 CTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGA 126983 |||| || || ||||| || ||| || || ||| || |||||||| || ||| ||| Sbjct 434 CTTTCTGGATGTTGTAGTCAGCCAAAGTACGGCCATCTTCGAGCTGTTTACCGGCGAAGA 375 Query 126984 TCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTT 127043 ||| ||||||||||| ||||| || || || ||||| ||| || |||| | | Sbjct 374 TCAGACGCTGCTGATCCGGAGGGATACCTTCTTTGTCTTGGATCTTGGCTTTGACATTGT 315 Query 127044 CGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 127103 ||| |||||| | ||||||||||| || | || ||||| || || ||||| || | Sbjct 314 CGATGGTGTCGGAGGACTCGACTTCGAGAGTGATGGTCTTGCCCGTTAGGGTTTTCACGA 255 Query 127104 AAATCTGCAT 127113 | |||||||| Sbjct 254 AGATCTGCAT 245 >seq3737 Length=14779 Score = 93.3 bits (102), Expect = 4e-14 Identities = 138/192 (72%), Gaps = 4/192 (2%) Strand=Plus/Plus Query 126924 CTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGA 126983 |||| || || |||||||| | | || | ||| || ||||| || || ||| ||| Sbjct 9320 CTTTGTGGATGTTGTAATCAGCAAGAGTCCTGCCATCTTCGAGCTGCTTACCGGCGAAGA 9379 Query 126984 TCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTT--CTGCTTGAGTTG 127041 |||| | ||||||||||||||| || || ||||| || ||| || ||| | |||| Sbjct 9380 TCAACCTCTGCTGATCGGGAGGGATACCTTCCTTATCGTGGATCTTGGCTG-TAACGTTG 9438 Query 127042 TTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101 |||| ||||| | || || || |||| ||| | ||| || ||||| ||||| || || Sbjct 9439 -TCGATCGTGTCGGAGCTTTCAACCTCGAGGGTGATCGTCTTTCCGGTAAGAGTCTTAAC 9497 Query 127102 AAAAATCTGCAT 127113 || |||||||| Sbjct 9498 GAATATCTGCAT 9509 >seq549 Length=32968 Score = 89.7 bits (98), Expect = 5e-13 Identities = 220/328 (67%), Gaps = 13/328 (4%) Strand=Plus/Plus Query 46971 ATCGAATGCATCCACACGGAAATGTACAACCTTCTCATACACGCCCTCATCAAAGACGAA 47030 ||||| ||||||| | || ||||||| || ||| || || | |||||||||| | Sbjct 20023 ATCGAGAACATCCACTCCGAGATGTACAGTCTCCTCTTAGACACTTACATCAAAGACAAC 20082 Query 47031 GAGAAGCAAGCGACG--CTTTTGAACGGTTTCGAGAGCATGCCCTGCGTGCGCAGAAAGG 47088 || || || ||| || || || |||||| || || ||||| | ||||| Sbjct 20083 AAGGAG--AGGGACCATCTCTTCCGCGCGATCGAGACGATCCCTTGCGTAAAGAAAAAGG 20140 Query 47089 CCGAGTGGGCCATGAAGTACATTGAAAACGAAAACGTCACTC--TGGCCGAACGTTTGAT 47146 || | |||||| |||||| || || | ||| | | ||||| | | | Sbjct 20141 CCCAATGGGCCTTGAAGTGGATCGATGGG-----CCTCAGGCCTTCGCCGAGAGGATCGT 20195 Query 47147 CGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTT-TGCGGCGATATTTTACA 47205 || ||||| ||| || || ||||||||||||||||||| ||| |||| || | Sbjct 20196 GGCGTTCGCTTGCGTGGAAGGGATCTTCTTCTCGGGCAGCTTCTGCT-CGATCTTCTGGC 20254 Query 47206 TGAAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGACG 47265 |||| | || | ||||| || ||||| || ||||||||| ||||||||||||| Sbjct 20255 TGAAGAAGCGTGGGCTCATGCCGGGTCTCACCTTCTCCAACGAGCTGATCTCGAGAGACG 20314 Query 47266 AAGGCCTGCACACCAACTTTGCCTGTCT 47293 ||||||| ||| | |||| || || || Sbjct 20315 AAGGCCTCCACTGCGACTTCGCGTGCCT 20342 >seq13321 Length=5581 Score = 82.4 bits (90), Expect = 7e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 126898 TCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGA 126957 || ||| ||||| |||| || || |||||||||||||||||||| ||| ||| || Sbjct 3672 TCCCAAAACCAAGTGTAGAGTTGAATCTTTTTGAATATTGTAATCATCCAACGTACGGTG 3613 Query 126958 ATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTT 127017 ||| || | ||||||||| || |||| | || ||||| ||| ||| || || ||||| Sbjct 3612 ATCCTCCATCTGTTTTCCGGCAAAGATAAGTCTCTGCTTGTCGCTAGGGATTCCTTCCTT 3553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475116048527680