Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raphanus_20raphanistrum_20subsp._20raphanistrum_20[genbank_20GCA_5F0 00769845.1_202014-10-28] 64,732 sequences; 253,833,977 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq4396 118 7e-22 seq12662 111 1e-19 seq24793 107 1e-18 seq4867 102 5e-17 seq7912 98.7 6e-16 seq964 98.7 6e-16 seq806 98.7 6e-16 seq14782 96.9 2e-15 seq11485 95.1 8e-15 seq1703 89.7 3e-13 seq1045 89.7 3e-13 seq1346 84.2 1e-11 seq20570 82.4 5e-11 seq7348 82.4 5e-11 seq2054 82.4 5e-11 >seq4396 Length=13502 Score = 118 bits (130), Expect = 7e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812 ||||||| | || | ||| |||||||||| ||| || ||||| ||||||||||| | Sbjct 330 TTCCTCCACGCAGACGCAACACCAAGTGAAGTGTAGACTCCTTCTGGATGTTATAGTCAG 271 Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872 | | | || |||| || ||||| || || || || || || || |||||||| | | Sbjct 270 CCAAGGTGCGACCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGTG 211 Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAA 34932 | | ||||||||||| |||||| |||||| | || | || | ||||| Sbjct 210 GGATTCCCTCCTTGTCCTGAATCTTAGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCAA 151 Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | |||| ||| || || ||||| || || ||||| ||||||||||||||| Sbjct 150 CTTCGAGGGTGATTGTCTTTCCGGTTAGTGTCTTGACAAAGATCTGCATA 101 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34770 AAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCA 34829 || |||||||||| || |||||||||||||| || || | | | | || |||| Sbjct 12702 AACACCAAGTGAAGGGTTGACTCTTTCTGAATGTTGTAATCAGCCAAGGTGCGACCATCC 12643 Query 34830 TCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34889 || ||||| || || || || || || || |||||||| | || | |||||||||||| Sbjct 12642 TCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGGATCCCCTCCTTGTCC 12583 Query 34890 CTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTT 34949 |||||| |||||| | || | || | ||| || || | || || || Sbjct 12582 TGAATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCCACCTCCAAAGTGATAGTC 12523 Query 34950 TTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || || ||||| ||||| ||||||||| Sbjct 12522 TTCCCGGTCAGTGTCTTAACAAAAATCTGCATA 12490 >seq12662 Length=5898 Score = 111 bits (122), Expect = 1e-19 Identities = 153/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| ||||||||||| || || ||||| ||||| ||||| | |||| | || |||| Sbjct 3929 CAACACCAAGTGAATGGTTGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGACCATC 3870 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 || ||||| ||||| || || || || || ||||||||| | || | || ||||| || Sbjct 3869 CTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGGATGCCTTCCTTATC 3810 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 ||||| ||| ||| | |||| || | |||||| |||| ||| ||||| Sbjct 3809 TTGGATCTTGGCTTTCACGTTATCAATCGTGTCCGAGCTCTCAACTTCGAGGGTGATGGT 3750 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || | |||||||| |||||||||||| Sbjct 3749 CTTACCAGTCAAGGTCTTCACGAAGATCTGCATA 3716 >seq24793 Length=2311 Score = 107 bits (118), Expect = 1e-18 Identities = 152/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||||| ||| || ||||| || || ||||| | || | || |||| Sbjct 1173 CAAGACCAAGTGAAGTGTAGACTCCTTCTGGATATTGTAGTCAGCGAGAGTCCGACCATC 1232 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 || ||||| ||||| || || || || || ||||||||| | || | ||| ||||| || Sbjct 1233 CTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGGATCCCTTCCTTATC 1292 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 ||||| ||| ||| | |||| || | |||||| |||| ||| ||||| Sbjct 1293 TTGGATCTTGGCTTTCACGTTATCAATCGTGTCCGAGCTCTCAACTTCGAGGGTGATGGT 1352 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || | ||||||||||||||||||||| Sbjct 1353 CTTACCAGTCAAGGTCTTCACAAAGATCTGCATA 1386 >seq4867 Length=12713 Score = 102 bits (112), Expect = 5e-17 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || ||||| | ||||| ||||||||||| ||| |||||||||||||| ||||| ||| Sbjct 7580 CCACCCCTAAGCCTCAGAACCAAGTGAAGAGTGGACTCTTTCTGAATGTTGTAGTCAGAA 7639 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || |||| |||| || || ||||| || ||||| || |||| || || ||| | || Sbjct 7640 AGCGTTCGACCATCCTCTAGTTGTTTCCCAGCAAAGATGAGTCTCTGTTGATCTGGTGGT 7699 Query 34875 ACCCCCTCCTTGTC 34888 | |||||| ||||| Sbjct 7700 ATCCCCTCTTTGTC 7713 >seq7912 Length=9007 Score = 98.7 bits (108), Expect = 6e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||| | || | ||| |||||||||| |||| || || || ||||| ||||| | Sbjct 6336 CCTCCACGCAGACGCAACACCAAGTGAAGTGTGGACTCCTTTTGGATGTTGTAGTCGGCT 6395 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 | | | || |||| || |||||||| || || || || || | |||||||| | || Sbjct 6396 AAGGTGCGACCATCCTCAAGCTGTTTCCCAGCGAAGATGAGCCTCTGCTGGTCCGGAGGG 6455 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | ||||||||||| ||||| |||||| | || | || | |||||| Sbjct 6456 ATACCCTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCAACC 6515 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || | || ||||| ||||| || | |||||| |||||||||||||| Sbjct 6516 TCCAAAGTAATGGTCTTTCCAGTCAAAGTCTTGACAAAGATCTGCAT 6562 >seq964 Length=27231 Score = 98.7 bits (108), Expect = 6e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 |||||||||||||| ||||| | || | ||| |||| |||||||| || |||||||| Sbjct 10139 TCTTTCTGAATGTTGTAGTCAGCTAGCGTGCGTCCATCCTCCAGCTGCTTACCGGCAAAG 10080 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || | |||||||| | || | ||||| || || ||||| |||||| Sbjct 10079 ATGAGCCTCTGCTGGTCCGGTGGGATACCCTCTTTATCCTGGATCTTAGCCTTGACGTTG 10020 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || | |||||| || | || |||||||| || ||||| ||||| ||| Sbjct 10019 TCAATGGTGTCTGAGCTCTCAACCTCCAAAGTGATGGTTTTACCGGTGAGGGTCTTGACA 9960 Query 34971 AAGATCTGCATA 34982 ||||| |||||| Sbjct 9959 AAGATTTGCATA 9948 Score = 96.9 bits (106), Expect = 2e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| || || || || | ||| | || |||| || |||||||| || || || Sbjct 10367 TCCTTCTGGATATTGTAATCTGCAAGCGTACGACCATCCTCAAGCTGTTTCCCAGCGAAG 10308 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || |||| |||||||| | || | ||| |||||||| |||||| |||||| Sbjct 10307 ATGAGTCTCTGCTGGTCCGGTGGGATCCCTTCCTTGTCCTGAATCTTAGCCTTGACGTTA 10248 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| ||| | ||| || || | || |||||||| || ||||| ||||||||| Sbjct 10247 TCGATCGTGTCAGAGCTCTCCACCTCCAAAGTGATGGTTTTGCCAGTGAGGGTCTTCACA 10188 Query 34971 AAGATCTGCAT 34981 || |||||||| Sbjct 10187 AAAATCTGCAT 10177 Score = 86.0 bits (94), Expect = 4e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | || | || |||| |||||||| || || ||||| Sbjct 9911 TCCTTCTGGATGTTGTAGTCAGCGAGCGTGCGACCATCCTCCAGCTGCTTACCAGCAAAA 9852 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || | ||||| || | || | ||||||||||| |||||| ||||| Sbjct 9851 ATAAGCCTCTGCTGATCCGGAGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACATTG 9792 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || | |||||| || | || ||||| |||||||| | |||||| || Sbjct 9791 TCAATAGTGTCGGAGCTCTCAACCTCCAGAGTGATGGTCTTTCCCGTCAAAGTCTTGACG 9732 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 9731 AAGATCTGCATA 9720 >seq806 Length=29032 Score = 98.7 bits (108), Expect = 6e-16 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | || | || | || || ||||| || ||||| || Sbjct 17986 TCCTTCTGGATGTTGTAGTCGGCGAGTGTGCGGCCGTCTTCGAGCTGCTTCCCGGCGAAG 18045 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || ||||| |||||||| |||| | ||| |||||||| ||||| |||||| Sbjct 18046 ATCAGTCGCTGCTGGTCCGGCGGGATCCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTG 18105 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || || ||| || |||| |||||| || || ||||| || || ||||| Sbjct 18106 TCGATGGTGTCGGAGGACTCGACCTCGAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACG 18165 Query 34971 AAGATCTGCATATT 34984 ||||||||||| || Sbjct 18166 AAGATCTGCATCTT 18179 >seq14782 Length=4961 Score = 96.9 bits (106), Expect = 2e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 34754 TCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGA 34813 |||||| |||| | | ||||| ||||| || || ||||| ||||| || |||| Sbjct 1968 TCCTCCTCTCAGACGGAGAACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCCGC 2027 Query 34814 AAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGG 34873 ||| | | | | || |||||||| || ||||| || || || || |||||||| | || Sbjct 2028 GAGGGTCCTTCCGTCTTCCAGCTGCTTCCCGGCGAAGATCAGACGCTGCTGGTCCGGTGG 2087 Query 34874 CACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAAC 34933 | ||| |||||||| |||||| ||||| | |||| || | || || Sbjct 2088 GATCCCTTCCTTGTCCTGAATCTTGGCCTTGACATTGTCGATCGTGTCGGATGATTCGAC 2147 Query 34934 ATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 || | |||||| || || ||||| || || ||||| ||||||||||| || Sbjct 2148 CTCTAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATTTT 2198 >seq11485 Length=6519 Score = 95.1 bits (104), Expect = 8e-15 Identities = 150/213 (70%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTC--CGAAAGGCTTCGTTCATCA 34829 ||||||||||| || || ||||| ||||| || || | |||| | || |||| Sbjct 5143 AACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCAGCCAAAG--TCCGACCATCC 5086 Query 34830 TCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34889 || |||||||| || || || || |||| |||||||| | || | || |||||||| Sbjct 5085 TCGAGCTGTTTCCCAGCGAAGATGAGTCTCTGCTGGTCCGGAGGGATGCCTTCCTTGTCC 5026 Query 34890 CTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTT 34949 ||||||| ||| || | |||| ||| | ||| || || | ||| |||||| Sbjct 5025 TGAATCTTCGCTTTCACATTGTCGATCGTGTCAGAGCTCTCCACTTCAAGGGTAATGGTT 4966 Query 34950 TTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || ||||| ||||| || || ||||||||| Sbjct 4965 TTACCGGTGAGTGTCTTGACGAAAATCTGCATA 4933 >seq1703 Length=21771 Score = 89.7 bits (98), Expect = 3e-13 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||||| || ||||||||| ||||| ||||| | ||| | | |||| Sbjct 18382 CAAGACCAAGTGAAGCGTAGATTCTTTCTGGATGTTGTAGTCAGCAAGAGTCCTCCCATC 18441 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 |||| ||| || |||||||| || | | |||||||| | || | ||| ||||| || Sbjct 18442 CTCCAACTGCTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGTGGGATCCCTTCCTTATC 18501 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 |||||| ||||| | || | || | ||| || || | || || || Sbjct 18502 CTGAATCTTAGCCTTGACATTGTCAATAGTATCGGAGCTCTCCACCTCCAAAGTAATAGT 18561 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 ||||| || | |||||| ||||||||||||||| Sbjct 18562 CTTTCCAGTCAAAGTCTTGACAAAGATCTGCATA 18595 >seq1045 Length=26565 Score = 89.7 bits (98), Expect = 3e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | ||| | || | || || |||||||| ||||| || Sbjct 2828 TCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCCTCGAGCTGTTTCCCGGCGAAG 2887 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | || |||||||| ||||| |||||| Sbjct 2888 ATCAGCCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTG 2947 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || || ||| || |||| ||| || || || ||||| || || ||||| Sbjct 2948 TCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATTGTCTTCCCCGTTAGGGTTTTCACG 3007 Query 34971 AAGATCTGCATATT 34984 ||||||||||| || Sbjct 3008 AAGATCTGCATCTT 3021 >seq1346 Length=23970 Score = 84.2 bits (92), Expect = 1e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || ||||| | |||||| |||||||||| || |||||||| ||||| ||||||| | Sbjct 5917 CCACCCCTAAGCCTCAAGACCAAGTGAAGAGTTGACTCTTTCTGGATGTTGTAGTCCGCA 5858 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| ||| |||| || || ||||| || || ||||| || | || || || | || Sbjct 5857 AGGGTTCTACCATCTTCAAGTTGTTTGCCAGCGAATATCAGCCTCTGTTGATCCGGTGGT 5798 Query 34875 ACCCCCTCCTTGTC 34888 | ||||||||||| Sbjct 5797 ATTCCCTCCTTGTC 5784 >seq20570 Length=3172 Score = 82.4 bits (90), Expect = 5e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||||| || || ||||| ||||| ||||| | | | ||| | || Sbjct 306 CAACACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCCAAGGTTCTCCCGTC 365 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 |||| ||| ||||| || || || || | ||||| || | || | ||| |||||||| Sbjct 366 CTCCAACTGCTTTCCTGCGAAGATAAGCCTCTGCTGATCCGGAGGAATCCCTTCCTTGTC 425 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 ||||| || ||| | || | ||| | || || |||| ||| || || Sbjct 426 CTGGATCTTGGCCTTAACGTTGTCGATGGTGTCAGAGCTTTCCACCTCGAGGGTGATTGT 485 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||||| |||||||| ||||| ||||||||||| Sbjct 486 CTTTCCTGTGAGAGTTTTCACGAAGATCTGCAT 518 >seq7348 Length=9517 Score = 82.4 bits (90), Expect = 5e-11 Identities = 141/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| || || ||||| ||||| ||||| | ||| | || |||| || Sbjct 205 ACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCAAGAGTGCGACCATCCTCG 146 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| ||||| || || || || || |||||||| | || | || |||||||| Sbjct 145 AGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTGTCCTGG 86 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| || ||| | || | || | |||||| || | || ||||| || Sbjct 85 ATCTTAGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCAACTTCCAATGTGATGGTCTTG 26 Query 34953 CCCGTGAGAGTCTTCACAAAGATCT 34977 || || ||||||||||| ||||||| Sbjct 25 CCGGTAAGAGTCTTCACGAAGATCT 1 >seq2054 Length=20018 Score = 82.4 bits (90), Expect = 5e-11 Identities = 140/199 (70%), Gaps = 12/199 (6%) Strand=Plus/Plus Query 34792 CTTTCTGAATGTTATAGTCCG--AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||||||| ||||| ||||| | |||| | || |||| || |||||||| ||||| || Sbjct 3204 CTTTCTGGATGTTGTAGTCAGCCAAAG--TACGGCCATCTTCGAGCTGTTTACCGGCGAA 3261 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || | || ||||| ||| | || | || || ||||| ||||| ||||| | Sbjct 3262 GATCAATCTCTGCTGATCTGGAGGGATACCTTCTTTGTCTTGGATCTTGGCCTTGAC--A 3319 Query 34910 TGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCT 34965 | | ||||| || || ||| || |||| ||| ||||| ||||| || || || | Sbjct 3320 T--TGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTTCCGGTTAGGGTTT 3377 Query 34966 TCACAAAGATCTGCATATT 34984 |||| ||||||||||| || Sbjct 3378 TCACGAAGATCTGCATCTT 3396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324377489654496