Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raphanus_20raphanistrum_20subsp._20raphanistrum_20[genbank_20GCA_5F0 00769845.1_202014-10-28] 64,732 sequences; 253,833,977 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq19602 174 1e-37 seq4396 114 8e-20 seq11485 111 1e-18 seq5834 107 1e-17 seq1703 102 5e-16 seq38054 98.7 6e-15 seq24793 98.7 6e-15 seq12662 98.7 6e-15 seq47 98.7 6e-15 seq8506 95.1 8e-14 seq27532 93.3 3e-13 seq7912 93.3 3e-13 seq964 93.3 3e-13 seq533 93.3 3e-13 seq5186 91.5 1e-12 seq1397 89.7 3e-12 >seq19602 Length=3420 Score = 174 bits (192), Expect = 1e-37 Identities = 554/842 (66%), Gaps = 18/842 (2%) Strand=Plus/Minus Query 475340 GAAGATGGTCTTTTCTCTGTAAGAGCAACAGCTGGAGATTCACATCTTGGTGGTGAAGAT 475399 ||||| ||| | || || | ||| || || ||||| | |||||||||||||||||| Sbjct 1378 GAAGAAGGTATCTTTGAGGTGAAAGCTACCGCCGGAGACACTCATCTTGGTGGTGAAGAT 1319 Query 475400 TTTGATAATAGACTTGT--ATCATGGTGTGTTGAAGATTTCAAGAGGAAAAATAAAGTTG 475457 ||||| || ||| | || | ||| | |||| |||| || |||||||| | || | Sbjct 1318 TTTGACAACAGAATGGTCAACCAT--TTTGTTCAAGAGTTTAAGAGGAAGAGCAAGAAGG 1261 Query 475458 ATCTTT-CAACATCTGCTAAAGCA-TTAAGACGTCTTAGAACTGCTTGTGAACGTGCTAA 475515 | || | | | ||| ||| ||| || || | || || || || || | || || Sbjct 1260 ACATTAGCGGTAACC-CTAGAGCTCTTAGGAGGT-TGAGGACGGCCTGCGAGAGAGCCAA 1203 Query 475516 GCGAGCTCTTTCTTCTGCTACTCAAACTACTGTTGAAGTTGATTCTCTTTTTGAAGGAAT 475575 | | |||||||||| | | ||||| || | || |||| ||||| ||||| || || Sbjct 1202 GAGGACTCTTTCTTCCACCGCGCAAACCACCATCGAGATTGACTCTCTCTTTGAGGGGAT 1143 Query 475576 TGATTATAATACTCTTATTACAAGGGCTAAATTTGAAGATATTTGTTCTGATCTCTTTAG 475635 ||||| || || | ||| | |||| ||||| || | |||||| || || Sbjct 1142 TGATTTCTATTCTGCACTCACACGTGCTAGGTTTGAGGAACTCAACATTGATCTTTTCAG 1083 Query 475636 AAAAACAATTGAACCCGTTGAACAAGT-TCTCAGAGATTCTAAACTTGACAA-ATCACAA 475693 || || || || ||||| |||| ||| | ||| |||| | ||||| | ||| Sbjct 1082 GAAGTGTATGGAGCCTGTTGAG-AAGTGTCTACGTGATGCTAAGATGGACAAGAGCACG- 1025 Query 475694 GTCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTCCAAAAATAAGAGAAATGCTT 475753 |||||||| |||| ||||| || ||||| ||| | || || ||| | | | | || Sbjct 1024 GTCCATGATGTTGTACTTGTCGGTGGTTCTACACGTATCCCCAAAGTTCAACAGCTTCTC 965 Query 475754 TCATCATATTTT-AATGGTAAAAAGTTAAATGAAAGTGTA--AATCCTGATGAAGCTGTT 475810 || || | || ||||||||| || | || |||| | || ||||| || |||||| Sbjct 964 -CAAGATTTCTTCAATGGTAAAGAGCTC--TGCAAGTCCATTAACCCTGACGAGGCTGTT 908 Query 475811 GCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAATCAGACGAGAAACTAAAT 475870 || ||||| || || || || | |||||| || ||| || | ||||| | | Sbjct 907 GCTTATGGTGCAGCGGTTCAGGGTGCTATTCTAAGCGGTGAAGGGAATGAGAAGGTGCAA 848 Query 475871 AATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATT 475930 | || |||| | ||||| ||||| ||||| | ||||||||||||| || || | Sbjct 847 GACCTTCTACTCTTGGACGTGACTCCCCTTTCTCTTGGTCTTGAAACAGCCGGTGGAGTC 788 Query 475931 ATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCC 475990 ||||| | | || | ||||| || | || ||| ||| || | | || || || Sbjct 787 ATGACCACCTTGATCCAGAGAAACACAACCATTCCAACCAAGAAGGAACAGGTCTTCTCT 728 Query 475991 ACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTC 476050 ||||| || || || || | ||| || ||| ||| |||||||| | | Sbjct 727 ACTTACTCAGACAACCAGCCTGGTGTGTTGATTCAAGTCTACGAAGGTGAGATAGCCAGA 668 Query 476051 ACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGA 476110 || ||||| || ||| || |||| || | || ||||| ||||| |||||| | Sbjct 667 ACCAAAGACAACAACCTCCTCGGAAAGTTCGAGCTCTCTGGTATCCCTCCGGCTCCCCGT 608 Query 476111 GGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTACT 476170 || || ||||| || ||| ||| || ||||||||||| ||||| || ||||| || Sbjct 607 GGTGTCCCTCAGATCACAGTGTGTTTCGACATTGATGCAAACGGTATACTCAATGTGTCT 548 Query 476171 GC 476172 || Sbjct 547 GC 546 Score = 96.9 bits (106), Expect = 2e-14 Identities = 100/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805 ||||||||||| ||||| || || ||||| |||||||| || ||||| || || || Sbjct 1588 ACTGTTCCAGCTTATTTCAACGACTCTCAGCGTCAAGCCACAAAAGACGCTGGTGTCATC 1529 Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865 || ||| | ||||| | ||||| || || || || || ||||| || |||| |||||| Sbjct 1528 GCTGGTTTGAATGTGATGCGTATCATCAACGAGCCCACTGCAGCTGCCATTGCCTATGGT 1469 Query 474866 CTTGATAAGAA 474876 ||||| ||||| Sbjct 1468 CTTGACAAGAA 1458 >seq4396 Length=13502 Score = 114 bits (126), Expect = 8e-20 Identities = 159/221 (72%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGT--ACTTTCTTTAGAAACATTATAATCAGCTAGA 480608 ||| || | ||| ||||||||||| || ||| | ||| || || || ||||| ||| Sbjct 12052 ACGGAGCCTGAGGACAAGATGAAGGGTCGACTCTTTTTGGATG--TTGTAGTCAGCGAGA 11995 Query 480609 GTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATT 480668 || | ||||||||||||||| || || || ||||| | || ||||| || ||||| Sbjct 11994 GTACGCCCATCTTCAAGTTGCTTCCCGGCGAAGATAAGCCTCTGCTGATCCGGGGGAATG 11935 Query 480669 CCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCA 480728 ||||||||||| |||||||| ||| || || || || || | | | || Sbjct 11934 CCTTCCTTGTCCTGAATCTTGGCTTTAACGTTGTCGATGGTGTCTGAGCTTTCCACCTCG 11875 Query 480729 AGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| || || || |||||||||||||||||||| || || Sbjct 11874 AGGGTGATCGTCTTTCCGGTGAGAGTCTTAACGAATATCTG 11834 Score = 87.8 bits (96), Expect = 1e-11 Identities = 153/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| ||||| | || | ||||||||| || || | ||| || ||||| ||||| Sbjct 551 ACGCAGACGCAAGACCAAGTGAAGTGTAGACTCCTTCTGGATATTGTAGTCAGCGAGAGT 492 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 ||| || || || ||||||||||| || || ||||| || || || ||||| || || Sbjct 491 CCTGCCGTCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGGATCCC 432 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAA 480729 |||||| ||||| ||||| ||| || ||||| || || | | | | | || | Sbjct 431 TTCCTTATCTTGGATCTTGGCTTTCACGTTATCAATCGTGTCCGAGCTCTCCA-CCTCCA 373 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || || || ||||| || | ||||| ||||| ||||| Sbjct 372 GTGTGATGGTCTTACCAGTCAAGGTCTTGACGAAGATTTG 333 >seq11485 Length=6519 Score = 111 bits (122), Expect = 1e-18 Identities = 158/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||||||||| || || | ||||| ||| || || | || |||||||| | ||| Sbjct 5155 ACGAAGACGAAGAACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCAGCCAAAGT 5096 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | ||| || || || || ||||| || || || | || || || ||||| || || Sbjct 5095 CCGACCATCCTCGAGCTGTTTCCCAGCGAAGATGAGTCTCTGCTGGTCCGGAGGGATGCC 5036 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAA 480729 ||||||||| |||||||| ||| ||| || || || |||| | | | | ||||| Sbjct 5035 TTCCTTGTCCTGAATCTTCGCTTTCACATTGTCGATCGTGTCAGAGCTCTCCA-CTTCAA 4977 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||||| |||||||||||||| ||||| |||||||| || Sbjct 4976 GGGTAATGGTTTTACCGGTGAGTGTCTTGACGAAAATCTG 4937 Score = 105 bits (116), Expect = 4e-17 Identities = 157/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| |||||||| || |||||||| ||| || || || ||| ||||| || || || Sbjct 4927 ACGGAGACGGAGGACGAGATGAAGCGTAGACTCCTTCTGAATATTGTAATCCGCAAGCGT 4868 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | ||| ||||| || || ||||| || || || | || || || ||||||||||| Sbjct 4867 GCGTCCATCCTCAAGCTGTTTACCAGCGAAGATGAGTCTCTGCTGGTCCGGAGGAATTCC 4808 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAA 480729 ||||||||| || |||||| ||| ||| |||||||| || | | | | || | ||| Sbjct 4807 TTCCTTGTCCTGGATCTTTGCTTTCACATTGTCAATAGTGTCGGAGCTCTCAACCTCCAA 4748 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || || || | |||||| || ||||| || Sbjct 4747 -AGTGATGGTCTTGCCTGTCAAAGTCTTGACAAAAATCTG 4709 >seq5834 Length=11305 Score = 107 bits (118), Expect = 1e-17 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 474332 ATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTA 474391 || || || ||| | || ||||||||| ||||| | ||||| | |||||| | || Sbjct 1935 ATAGGGATAGATCTTGGTACTACTTACTCATGTGTTGGTGTTTACAAGAATGGTCATGTT 1876 Query 474392 GAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAA 474451 || || ||||||||||||||||| || | | ||||| || | ||| ||| ||||| Sbjct 1875 GAGATCATTGCCAATGACCAAGGAAACCGTATTACACCTTCGTGGGTTGGTTTCACTGAC 1816 Query 474452 ACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACT 474511 | ||| || ||||| || |||||||| | || || || |||||||| | ||| Sbjct 1815 AATGAGAGGCTCATTGGTGAGGCTGCTAAGAACCAGGCGGCTGTTAATCCTGAGAGGACT 1756 Query 474512 ATTTTTGATGCTAAAAGATTGATTGGTCGTAA 474543 | ||||||| || ||||||||||| || || Sbjct 1755 GTCTTTGATGTCAAGAGATTGATTGGGCGAAA 1724 >seq1703 Length=21771 Score = 102 bits (112), Expect = 5e-16 Identities = 160/224 (71%), Gaps = 10/224 (4%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGT--ACT--TTCTTTAGAAACATTATAATCAGCTA 480606 |||||| | ||| || ||||| || || ||| |||| || | ||||||||||| | Sbjct 18601 ACGAAGCCTGAGAACGAGATGCAGAGTCGACTCCTTCTGTATA----TTATAATCAGCAA 18656 Query 480607 GAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAA 480666 |||| || ||| || | |||||||| ||||| || || | || ||||| ||||| | Sbjct 18657 GAGTCCTCCCATCCTCCAACTGCTTTCCCGCAAAGATCAGCCTCTGCTGATCCGGAGGGA 18716 Query 480667 TTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTT 480725 | |||||||| ||||| ||||| ||||| || || ||||||| | | | | | Sbjct 18717 TCCCTTCCTTATCTTGTATCTTAGCCTTGACGTTGTCGATTGTATCAGAGCTCTCCACCT 18776 Query 480726 TCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| || ||||| || ||||| |||||||| ||||| || || Sbjct 18777 CCAA-AGTGATAGTCTTTCCGGTAAGAGTCTTGACGAAGATCTG 18819 Score = 91.5 bits (100), Expect = 1e-12 Identities = 114/154 (74%), Gaps = 2/154 (1%) Strand=Plus/Plus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 ||| || || ||||||||||| || || ||||| || ||||| ||||| || |||||||| Sbjct 17983 ATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCCGGAGGGATACCTTCCTT 18042 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAAGGGTAA 480735 ||| || ||||| || || |||||||| |||| | | | || | ||| || | Sbjct 18043 GTCCTGGATCTTAGCCTTCACGTTGTCAATAGTGTCAGAGCTCTCAACCTCCAA-TGTGA 18101 Query 480736 TAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 |||| || ||||| |||||||| || || || || Sbjct 18102 TAGTCTTCCCGGTAAGAGTCTTGACAAAGATCTG 18135 >seq38054 Length=942 Score = 98.7 bits (108), Expect = 6e-15 Identities = 540/849 (64%), Gaps = 26/849 (3%) Strand=Plus/Minus Query 475338 TCGAAGATGGTCTTTTCTCTGTAAGAGCAACAGCTGGAGATTCACATCTTGGTGGTGAAG 475397 ||||||| ||| | ||| || | || || |||||||| | |||||||||||||||| Sbjct 892 TCGAAGAAGGTATCTTCGAGGTGAAGGCTACCGCTGGAGACACTCATCTTGGTGGTGAAG 833 Query 475398 ATTTTGATAATAGACTTGT--ATCATGGTGTGTTGAAGATTTCAAGAGGAAAAATAAAGT 475455 | ||||| || || | || | ||| | ||| |||| || |||||||| | || Sbjct 832 ACTTTGACAACAGGATGGTCAACCAT--TTTGTCCAAGAGTTTAAGAGGAAGAGCAAGAA 775 Query 475456 TGATCTTTCAACATCTG-----CTAAAGCATTAAGACGTCTTAGAACTGCTTGTGAACGT 475510 || || | | | | | ||| || || | | |||||||| || || | Sbjct 774 GGA-----CATAAGCGGTAACCCGAGAGCTTTGAGGAGGTTGAGAACTGCCTGCGAGAGA 720 Query 475511 GCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACTGTTGAAGTTGATTCTCTTTTTGAA 475570 || ||| | |||| ||||| | |||| || || | || | || ||||| |||||| Sbjct 719 GCAAAGAGGACTCTCTCTTCCACCGCTCAGACCACCATCGAGATCGACTCTCTCTTTGAA 660 Query 475571 GGAATTGA-TTATAATACTCTTATTACAAGGGCTAAATTTGAAGATATTTGTTCTGATCT 475629 || ||||| || || | || | || | |||| || || || | ||||| Sbjct 659 GGGATTGACTTCTACT-CTGCACTCACGCGCGCTAGGTTCGAGGAGCTCAACATGGATCT 601 Query 475630 CTTTAGAAAAACAATTGAACCCGTTGAACAAGT-TCTCAGAGATTCTAAACTTGACAA-A 475687 || || || || || || ||||| |||| ||| | ||| |||| | ||||| | Sbjct 600 ATTCAGGAAGTGTATGGAGCCTGTTGAG-AAGTGTCTACGTGATGCTAAGATGGACAAGA 542 Query 475688 TCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTCCAAAAATAAGAGAA 475747 |||| ||||| || | || || || || || || || | || || || | | | Sbjct 541 GCACA-GTCCACGATGTCGTCCTCGTCGGCGGCTCCACGCGTATCCCCAAGGTTCAACAG 483 Query 475748 ATGCTTTCATCATATTTTAATGGTAAAAAGTTAAATGAAAGTGTA--AATCCTGATGAAG 475805 | || | | || ||||||||| || | || |||| | || ||||| || | Sbjct 482 CTTCTCCAAGACTTCTTCAATGGTAAAGAGCTC--TGCAAGTCCATTAACCCTGACGAGG 425 Query 475806 CTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATT-TTATCAGGTCAATCAGACGAGAAA 475864 | || || || ||||| ||||| |||| ||||||| ||| | || || ||||||| Sbjct 424 CCGTGGCTTACGGAGCAGCTGTTCAAGGAGCTATTCTTAGC-GGCGAAGGGAACGAGAAG 366 Query 475865 CTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGA 475924 | | | || | || | ||||| ||||| || || | ||||| ||||| | || Sbjct 365 GTGCAAGACCTTCTTCTGTTGGACGTGACTCCTCTCTCTCTCGGTCTCGAAACCGCCGGT 306 Query 475925 GGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTA 475984 || | ||||||| | || | || || ||| | ||||| ||| || | | || Sbjct 305 GGAGTCATGACTACGTTGATCCAGAGGAACACTACGATCCCCACCAAGAAGGAACAGGTC 246 Query 475985 TTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGA 476044 || |||||||| ||||| || || | ||| || ||| ||| |||||||| ||| Sbjct 245 TTCTCCACTTACTCTGACAACCAGCCTGGTGTGTTGATTCAAGTCTACGAAGGTGAGAGA 186 Query 476045 AAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCT 476104 || ||||| || ||| || |||| || | || || || ||||||||| Sbjct 185 GCCAGAACCAAAGACAACAACCTCCTCGGAAAATTCGAGCTCTCTGGCATCCCTCCTGCT 126 Query 476105 CCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAAT 476164 || | || || ||||| || ||| || || || || || || || || || ||| Sbjct 125 CCACGTGGCGTCCCTCAGATCACAGTCTGCTTCGACATCGACGCCAACGGGATCCTGAAT 66 Query 476165 GTTACTGCT 476173 || ||||| Sbjct 65 GTCTCTGCT 57 >seq24793 Length=2311 Score = 98.7 bits (108), Expect = 6e-15 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| || | ||| ||||||||||| || || || | || |||||||| ||||| Sbjct 1620 ACGGAGCCTGAGAACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAATCAGCGAGAGT 1679 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 ||| || || || |||||||| || || ||||| | || ||||| || ||||| || Sbjct 1680 CCTGCCGTCCTCGAGCTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGGGGAATGCC 1739 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 |||||||| |||||||| ||| || || || || || | | | || || Sbjct 1740 CTCCTTGTCCTGAATCTTGGCTTTAACGTTGTCGATGGTGTCTGAGCTTTCCACCTCGAG 1799 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| || || || || |||||||||||||| ||||| || Sbjct 1800 GGTGATTGTCTTTCCCGTGAGAGTCTTAACAAAAATCTG 1838 Score = 87.8 bits (96), Expect = 1e-11 Identities = 153/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| ||||| | || | ||||||||| || || | ||| || ||||| ||||| Sbjct 1164 ACGCAGACGCAAGACCAAGTGAAGTGTAGACTCCTTCTGGATATTGTAGTCAGCGAGAGT 1223 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | ||| || || ||||||||||| || || ||||| || || || ||||| || || Sbjct 1224 CCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGGATCCC 1283 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAA 480729 |||||| ||||| ||||| ||| || ||||| || || | | | | || ||| | Sbjct 1284 TTCCTTATCTTGGATCTTGGCTTTCACGTTATCAATCGTGTCCGAGCTCTCAA-CTTCGA 1342 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 |||| || || ||||| || | ||||| || || || || Sbjct 1343 GGGTGATGGTCTTACCAGTCAAGGTCTTCACAAAGATCTG 1382 >seq12662 Length=5898 Score = 98.7 bits (108), Expect = 6e-15 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| || | ||| ||||||||||| || || || | || |||||||| ||||| Sbjct 3482 ACGGAGCCTGAGAACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAATCAGCGAGAGT 3423 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 ||| || || || |||||||| || || ||||| | || ||||| || ||||| || Sbjct 3422 CCTGCCGTCCTCGAGCTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGGGGAATGCC 3363 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 |||||||| |||||||| ||| || || || || || | | | || || Sbjct 3362 CTCCTTGTCCTGAATCTTGGCTTTAACGTTGTCGATGGTGTCTGAGCTTTCCACCTCGAG 3303 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| || || || || |||||||||||||| ||||| || Sbjct 3302 GGTGATTGTCTTTCCCGTGAGAGTCTTAACAAAAATCTG 3264 Score = 86.0 bits (94), Expect = 4e-11 Identities = 113/154 (73%), Gaps = 2/154 (1%) Strand=Plus/Minus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 ||| ||||| ||||||||||| || || ||||| || || || ||||| || |||||||| Sbjct 3872 ATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGGATGCCTTCCTT 3813 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAAGGGTAA 480735 ||||| ||||| ||| || ||||| || || | | | | || ||| ||||| | Sbjct 3812 ATCTTGGATCTTGGCTTTCACGTTATCAATCGTGTCCGAGCTCTCAA-CTTCGAGGGTGA 3754 Query 480736 TAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || ||||| || | ||||| ||||| || || Sbjct 3753 TGGTCTTACCAGTCAAGGTCTTCACGAAGATCTG 3720 >seq47 Length=58161 Score = 98.7 bits (108), Expect = 6e-15 Identities = 387/588 (66%), Gaps = 23/588 (4%) Strand=Plus/Plus Query 475359 TAAGAGCAACAGCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGT-- 475416 |||| || || || ||||| | ||||| ||||| |||||||| || || || | || Sbjct 44301 TAAG-GCCACTGCCGGAGACACTCATCTCGGTGGGGAAGATTTCGACAACAGGATGGTCA 44359 Query 475417 ATCATGGTGTGTTGAAGATTTCAAGAGGAAAAATAAAGTTGATCTTTCAACATCTGCTAA 475476 | || | |||| | || || |||||||| | || || || | | | | Sbjct 44360 ACCAC--TTTGTTCAGGAGTTTAAGAGGAAGAGCAAGAAGGACATTACTGGAAACCCCAG 44417 Query 475477 AGCA-TTAAGACGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTA 475535 ||| ||| || || | || || || ||||| | || ||| | ||||||| || || Sbjct 44418 AGCTCTTAGGAGGT-TGAGGACAGCCTGTGAGAGGGCAAAGAGGACTCTTTCCTCCACTG 44476 Query 475536 CTCAAACTACTGTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTA--T 475593 |||| || || | || |||| ||||| ||||| |||||||||| |||||| | Sbjct 44477 CTCAGACCACCATCGAGATTGACTCTCTCTTTGAGGGAATTGATTTC--TACTCTGCACT 44534 Query 475594 TACAAGGGCTAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGT 475653 || | |||| ||| || || | ||||||||||| || || || || || Sbjct 44535 CACCCGTGCTAGATTCGAGGAGCTCAACATGGATCTCTTTAGGAAGTGTATGGAGCCAGT 44594 Query 475654 TGAACAAGT-TCTCAGAGATTCTAAACTTGACAA-ATCACAAGTCCATGAAATTGTTCTT 475711 || |||| |||| | ||| |||| | ||||| | ||| ||||| || |||| ||| Sbjct 44595 AGAG-AAGTGTCTCCGTGATGCTAAGATGGACAAGAGCACC-GTCCACGATGTTGTCCTT 44652 Query 475712 GTAGGAGGTTCAACAAGAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTT-AATGG 475770 || || || || || | ||||| || | || ||||| || | | || || || Sbjct 44653 GTCGGTGGCTCCACCCGTATTCCCAAGGTTCAGCAATTGCTT-CAGGACTTCTTCAACGG 44711 Query 475771 TAAAAAGTTAAATGAAAGTGTA--AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTC 475828 ||| || | || |||| || || ||||| || |||||||| || || ||||||||| Sbjct 44712 CAAAGAGCTT--TGCAAGTCTATTAACCCTGACGAGGCTGTTGCTTACGGTGCTGCTGTC 44769 Query 475829 CAAGCAGCTATTTTATCAGGTCAATCAGACGAGAAACTAAATAATATTGTACTTG-TTGA 475887 || | |||||| | ||| || | ||||||| | | || || | |||| |||| Sbjct 44770 CAGGGTGCTATTCTCAGCGGTGAAGGAAACGAGAAGGTCCAAGATCTTCT-CTTGCTTGA 44828 Query 475888 CGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGAC 475935 || || || || ||| | ||||||||||| | || || | ||||| Sbjct 44829 TGTCACACCTCTCTCACTCGGTCTTGAAACCGCCGGTGGTGTCATGAC 44876 >seq8506 Length=8498 Score = 95.1 bits (104), Expect = 8e-14 Identities = 131/182 (72%), Gaps = 10/182 (5%) Strand=Plus/Plus Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805 || ||||| || || || ||||| ||||| |||||||| ||||| || || || ||| Sbjct 7630 ACAGTTCCTGCTTACTTCAATGACTCTCAGCGTCAAGCTACTAAGGACGCTGGTGTGATT 7689 Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865 || ||| | ||||| | ||||| || || || || || ||||| || |||| |||||| Sbjct 7690 GCTGGTTTGAATGTGATGCGTATCATCAACGAGCCTACTGCAGCAGCCATTGCCTATGGT 7749 Query 474866 CTTGATAAGAATTC------TGAC--AAAGAAGTAAATGTTTTAATCTTTGATTGTGGAG 474917 ||||| ||||| | || | | ||||| ||||| || ||||||||| ||| | Sbjct 7750 CTTGACAAGAAGGCGACCAGTGTCGGAGAGAAG--AATGTGTTGATCTTTGATCTTGGTG 7807 Query 474918 GT 474919 || Sbjct 7808 GT 7809 >seq27532 Length=1859 Score = 93.3 bits (102), Expect = 3e-13 Identities = 131/183 (72%), Gaps = 12/183 (7%) Strand=Plus/Plus Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805 ||||| ||||| || || || || ||||| |||||||| || || || || || || Sbjct 869 ACTGTCCCAGCTTACTTCAACGACTCTCAGCGTCAAGCTACAAAGGACGCTGGTGTGATC 928 Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865 || ||||| ||||| | ||||| || || || || || || || || ||||||||||| Sbjct 929 GCCGGTCTGAATGTGATGCGTATCATCAACGAGCCGACTGCTGCAGCCATTGCTTATGGT 988 Query 474866 CTTGATAAGAATTCTGACAA---------AGAAGTAAATGTTTTAATCTTTGATTGTGGA 474916 ||||| ||||| | ||| | ||||| |||||||| ||||||||| ||| Sbjct 989 CTTGACAAGAAGGC-GACCAGTGTTGGGGAGAAG--AATGTTTTGATCTTTGATCTTGGT 1045 Query 474917 GGT 474919 ||| Sbjct 1046 GGT 1048 >seq7912 Length=9007 Score = 93.3 bits (102), Expect = 3e-13 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||| | ||| || |||||||| ||| || || | || || || || | || Sbjct 6569 ACGAAGCCTGAGAACGAGATGAAGCGTAGACTCCTTTTGGATGTTGTAGTCTGCCAATGT 6628 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 |||| ||||| || ||||| || || || || || | || ||||| ||||| || || Sbjct 6629 TCTGCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGATCGGGAGGGATACC 6688 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 ||||||||| |||||||| |||||| || || || || | | | || || Sbjct 6689 TTCCTTGTCCTGAATCTTGGCTTTGACGTTGTCGATTGTGTCGGAGCTTTCCACCTCGAG 6748 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| || || || || ||||||||||||||||| || || Sbjct 6749 GGTGATGGTCTTTCCCGTGAGAGTCTTAACGAAGATCTG 6787 >seq964 Length=27231 Score = 93.3 bits (102), Expect = 3e-13 Identities = 154/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||||||||| || || | ||||| || || || | ||| || ||||| || || Sbjct 10626 ACGAAGACGAAGAACCAAGTGAAGCGTCGACTCCTTCTGGATATTGTAGTCAGCAAGCGT 10567 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | ||| ||||| ||||| ||||| || || || | ||||| || ||||| || || Sbjct 10566 GCGACCATCCTCAAGCTGCTTACCAGCGAAGATGAGTCTCTGTTGGTCCGGAGGGATCCC 10507 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAA 480729 ||||||||| ||||| || || ||| || || || || | | | | || || ||| Sbjct 10506 TTCCTTGTCCTGAATTTTAGCCTTCACATTGTCGATTGTGTCTGAGCTCTCAACTTCCAA 10447 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||||||| || || || |||||||| || || ||||| Sbjct 10446 -GGTAATAGTCTTGCCTGTCAGAGTCTTCACAAAGATTTG 10408 Score = 87.8 bits (96), Expect = 1e-11 Identities = 153/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||||||||| | ||||| ||||| || || || | || || ||||| || || Sbjct 9942 ACGAAGACGCAAGACAAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCAGCGAGCGT 9883 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | ||| || || ||||| |||||||||||||| | || ||||| ||||| || || Sbjct 9882 GCGACCATCCTCCAGCTGCTTACCAGCAAAAATAAGCCTCTGCTGATCCGGAGGGATGCC 9823 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAA 480729 |||||||| || ||||| |||||| |||||||| || | | | | || || | Sbjct 9822 CTCCTTGTCCTGGATCTTCGCCTTGACATTGTCAATAGTGTCGGAGCTCTCAA-CCTCCA 9764 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || || || || || || | |||||| ||||| || || Sbjct 9763 GAGTGATGGTCTTTCCCGTCAAAGTCTTGACGAAGATCTG 9724 >seq533 Length=33188 Score = 93.3 bits (102), Expect = 3e-13 Identities = 111/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 474726 AAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAA 474785 ||||||| | || || |||||||| || || || ||||| || || || | ||| | Sbjct 26731 AAGTAACCAAGGCTGTTATTACTGTGCCTGCTTACTTTAACGACTCGCAGAGGACAGCTA 26790 Query 474786 CTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAG 474845 |||||||||| || | ||||| ||| | ||||| |||||||||| ||||| || || | Sbjct 26791 CTAAAGATGCTGGTCGCATTGCTGGTTTGGATGTTCTACGTATTATCAATGAGCCCACTG 26850 Query 474846 CAGCCGCACTTGCTTATGGTCTTGATAAGAA 474876 | || | | ||||||||| |||| | ||| Sbjct 26851 CTGCTTCTTTGGCTTATGGTTTTGAGAGGAA 26881 >seq5186 Length=12202 Score = 91.5 bits (100), Expect = 1e-12 Identities = 92/120 (77%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805 || ||||| || |||||||||||| |||| | || || ||||||||||| || ||||| Sbjct 4136 ACCGTTCCGGCTTATTTTAATGATGCTCAGAGGCAGGCTACTAAAGATGCTGGTAGAATC 4077 Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865 || ||| | |||| | ||||||||||||||||| || || || ||| | |||||| Sbjct 4076 GCTGGTTTGGATGTGGAGAGGATTATTAATGAACCAACGGCTGCTGCTCTTTCGTATGGT 4017 >seq1397 Length=23532 Score = 89.7 bits (98), Expect = 3e-12 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 474332 ATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTA 474391 || || |||||| | || ||||| ||| ||||| | ||||| | |||||| | || Sbjct 18913 ATAGGGATTGATCTTGGTACTACCTACTCCTGTGTTGGTGTTTACAAGAATGGTCATGTT 18972 Query 474392 GAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAA 474451 || || || || ||||||||||| || | | ||||| || | ||| ||| || || Sbjct 18973 GAGATCATAGCTAATGACCAAGGAAACCGTATTACACCTTCCTGGGTTGGTTTCACCGAC 19032 Query 474452 ACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACT 474511 | ||| |||||||| || |||||||| | || || || |||||| | | ||| Sbjct 19033 AATGAGAGGCTTATTGGTGAGGCTGCTAAGAACCAGGCGGCTGTTAATCCCGAGAGGACT 19092 Query 474512 ATTTTTGATGCTAAAAGATTGATTGGTCGTAA 474543 | ||||||| || ||| ||||||| || || Sbjct 19093 GTCTTTGATGTCAAGAGACTGATTGGGCGAAA 19124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3265402530440336