Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Raphanus_20raphanistrum_20subsp._20raphanistrum_20[genbank_20GCA_5F0
00769845.1_202014-10-28] 64,732 sequences; 253,833,977 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq27908 95.1 6e-15
>seq27908
Length=1802
Score = 95.1 bits (104), Expect = 6e-15
Identities = 153/220 (70%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 26064 TACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCA 26123
|||| ||||| || ||||| ||||| || || || | ||||| ||||||||||| ||
Sbjct 692 TACCCTTTCTCTTGCCTCCTCCTTGGTCGACATAACGAGCAGTATCATTGAAAACCCGCA 751
Query 26124 ACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATC 26183
||||||||| | ||| |||| ||| || |||| | | || | ||| | | |
Sbjct 752 GCATTGGAACAATACCATTTGATTCTCCATTAGTGCCACGGATGTAACTTCCAGAAGCAC 811
Query 26184 TAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTG 26243
|| | |||| | || ||| || || ||||| |||| |||| ||||||| |||
Sbjct 812 GGATGTTGTGAACCGAAACACCTATACCCCCAGCTGATTTACTAATAACTGCACACTCTT 871
Query 26244 AAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCAT 26283
| |||||| | ||||||| ||||||||| | |||||
Sbjct 872 TCAATGTATCATATATTCCTTCAATGCTATCATCCTTCAT 911
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 252840371366900
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |