Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raphanus_20raphanistrum_20subsp._20raphanistrum_20[genbank_20GCA_5F0 00769845.1_202014-10-28] 64,732 sequences; 253,833,977 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq4396 140 3e-28 seq25552 131 2e-25 seq20570 127 2e-24 seq3667 127 2e-24 seq7912 123 2e-23 seq2054 122 8e-23 seq1045 122 8e-23 seq37186 118 1e-21 seq14782 116 3e-21 seq24793 114 1e-20 seq1703 113 4e-20 seq11485 111 1e-19 seq12662 109 5e-19 seq3737 104 2e-17 seq806 98.7 9e-16 seq964 89.7 5e-13 >seq4396 Length=13502 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || |||||||| || || || || |||||||| || | || Sbjct 102 ATGCAGATCTTTGTCAAGACACTAACCGGAAAGACAATCACCCTCGAAGTTGAGAGCTCC 161 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || ||||| || ||||| || || || || Sbjct 162 GACACCATTGACAACGTCAAGGCTAAGATTCAGGACAAGGAGGGAATCCCACCGGACCAG 221 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||| || || || ||||| |||||| | | | || | || |||||| Sbjct 222 CAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAGGATGGTCGCACCTTGGCTGACTATAAC 281 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| || ||||| |||||||||||||| |||| ||||| Sbjct 282 ATCCAGAAGGAGTCTACACTTCACTTGGTGTTGCGTCTGCGTGGAGG 328 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| |||| || || ||||| || ||||| || | || || || | || Sbjct 12491 ATGCAGATTTTTGTTAAGACACTGACCGGGAAGACTATCACTTTGGAGGTGGAGAGCTCC 12550 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || ||||| || || || || || || || Sbjct 12551 GACACCATTGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGGATCCCACCGGACCAG 12610 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||| || || || ||||| |||||| | | | || | ||||| ||| Sbjct 12611 CAGCGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGTCGCACCTTGGCTGATTACAAC 12670 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| || || || || || ||||||||||| || |||| || || Sbjct 12671 ATTCAGAAAGAGTCAACCCTTCACTTGGTGTTACGTCTGCGTGGTGG 12717 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || | || ||||| || || || || || || || | | Sbjct 330 ATGCAAATCTTCGTCAAGACCTTGACTGGTAAGACCATCACACTGGAGGTGGAGAGCTCG 389 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| ||||||||||| || ||||| || ||||| || || Sbjct 390 GACACGATTGATAACGTGAAAGCCAAGATCCAAGATAAGGAAGGGATCCCTCCAGACCAG 449 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||| || || || ||||| ||||| || | | | || || || Sbjct 450 CAGCGTCTCATCTTCGCTGGAAAGCAGCTCGAGGACGGCAGGACTCTCGCTGACTACAAT 509 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| || ||||| |||||||| ||||| |||| || || Sbjct 510 ATCCAGAAGGAGTCTACACTTCACTTGGTCTTGCGTCTGCGTGGTGG 556 >seq25552 Length=2169 Score = 131 bits (144), Expect = 2e-25 Identities = 123/157 (78%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | ||||| ||||| || || || || || |||||||| || || | Sbjct 244 GATGCAGATCTTCGTGAAAACCCTAACGGGCAAGACCATCACTCTCGAAGTCGAGTCCTC 303 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | || | || ||| |||||||||||||||||||| || ||||| ||||| Sbjct 304 CGACACCATCGACAATGTCAAAGCCAAGATCCAAGACAAAGAAGGTATCCCTCCGGATCA 363 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT 24859 || ||| ||||||| ||||| |||||||| || ||| Sbjct 364 GCAGCGTCTGATCTTCGCCGGTAAACAGCTCGAAGAT 400 >seq20570 Length=3172 Score = 127 bits (140), Expect = 2e-24 Identities = 160/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | ||||| || || || || || || || ||||| || ||| | | Sbjct 519 GATGCAGATCTTCGTGAAAACTCTCACAGGAAAGACAATCACCCTCGAGGTGGAAAGCTC 460 Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 ||||| | || |||| ||| | || |||||| ||||| ||||| || ||||| |||| Sbjct 459 TGACACCATCGACAACGTTAAGGCCAA-GATCCAGGACAAGGAAGGGATTCCTCCGGATC 401 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881 | || | | ||||| || || || ||| ||||||| ||||| | || | || || | Sbjct 400 AGCAGAGGCTTATCTTCGCAGGAAAGCAGTTGGAGGACGGGAGAACCTTGGCTGACTACA 341 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 |||| || ||||| || || || |||||||||||||| Sbjct 340 ACATCCAGAAGGAGTCTACCCTTCACTTGGTGTTGCG 304 >seq3667 Length=14967 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | ||||| ||||| || || || || || ||||| || ||| | | Sbjct 5722 GATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATCACCCTCGAGGTCGAATCTTC 5663 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | || | || ||| |||||||| ||||| ||||| || ||||| || || Sbjct 5662 CGACACCATCGACAATGTCAAAGCCAAGATCCAGGACAAGGAAGGCATCCCTCCGGACCA 5603 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || || ||||||| |||||||||||||| ||||| | | | | | | || || || Sbjct 5602 GCAGCGGCTGATCTTCGCCGGGAAACAGCTCGAGGACGGGCGCACCCTCGCCGACTACAA 5543 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCG 24932 ||| || ||||| || || || ||| | || | || | ||||| |||| Sbjct 5542 CATCCAGAAGGAGTCTACTCTCCACCTCGTCCTCCGTCTCCGCGGTGGCG 5493 >seq7912 Length=9007 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || | || || || || ||||| | || || || | || Sbjct 6562 ATGCAGATCTTTGTCAAGACTTTGACTGGAAAGACCATTACTTTGGAGGTTGAGAGCTCC 6503 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||||||||| || || || ||||| || || Sbjct 6502 GACACCATTGACAACGTCAAGGCCAAGATCCAAGACAAGGAGGGTATCCCTCCGGACCAG 6443 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | | ||||| || ||||||||||| |||||| | | | | | || || ||| Sbjct 6442 CAGAGGCTCATCTTCGCTGGGAAACAGCTTGAGGATGGTCGCACCTTAGCCGACTACAAC 6383 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || |||||||| || ||||| |||||||||||||| |||| |||||| Sbjct 6382 ATCCAAAAGGAGTCCACACTTCACTTGGTGTTGCGTCTGCGTGGAGGC 6335 Score = 116 bits (128), Expect = 3e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| |||| || || || || || || || || ||||| || ||| | | Sbjct 6791 GATGCAGATCTTCGTTAAGACTCTCACGGGAAAGACCATCACCCTCGAGGTGGAAAGCTC 6732 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||||| | || | || ||| ||||| || ||||| ||||| || ||||||||||| Sbjct 6731 CGACACAATCGACAACGTCAAAGCCAAGATTCAGGACAAGGAAGGTATCCCTCCCGATCA 6672 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | | ||||| ||||| || ||||| || || |||| || |||| || || Sbjct 6671 GCAGAGGCTCATCTTCGCCGGCAAGCAGCTCGAAGACGGCAGAACATTGGCAGACTACAA 6612 Query 24883 CATTCAAAAGGAATCGACACTACA 24906 ||| |||||||| || || || || Sbjct 6611 CATCCAAAAGGAGTCTACGCTTCA 6588 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || ||||| || || || ||| | || || || | | Sbjct 6334 ATGCAGATCTTTGTCAAGACACTTACCGGCAAGACCATCACGTTGGAGGTGGAGAGCTCT 6275 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| || || ||||| || ||||| || || Sbjct 6274 GACACCATTGACAATGTCAAGGCCAAGATCCAGGATAAGGAAGGTATCCCTCCGGACCAG 6215 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||| || || || ||||| |||||| | | | | | || || || Sbjct 6214 CAGCGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGTCGCACCTTAGCCGACTACAAT 6155 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 || |||||||| || ||||| |||||||||||||| Sbjct 6154 ATCCAAAAGGAGTCCACACTTCACTTGGTGTTGCG 6120 >seq2054 Length=20018 Score = 122 bits (134), Expect = 8e-23 Identities = 121/157 (77%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | ||||| |||||||| || || || || ||||| || || || | Sbjct 3394 GATGCAGATCTTCGTGAAAACCCTAACCGGAAAGACCATCACCCTCGAGGTCGAGTCCTC 3335 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | || | || || |||||||||||||||||||| || ||||| ||||| Sbjct 3334 CGACACCATCGACAATGTCAAGGCCAAGATCCAAGACAAAGAAGGTATCCCTCCAGATCA 3275 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT 24859 || | |||||||| ||||| |||||||| || ||| Sbjct 3274 GCAGAGATTGATCTTCGCCGGTAAACAGCTCGAAGAT 3238 >seq1045 Length=26565 Score = 122 bits (134), Expect = 8e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | ||||| ||||| || || || || || ||||| || || || | Sbjct 3019 GATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACAATCACCCTCGAGGTCGAGTCCTC 2960 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | || | || || |||||||| ||||| ||||| || ||||| || || Sbjct 2959 CGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATCCCTCCGGACCA 2900 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || || ||||||| |||||||||||||| ||||| | | | | | | || || || Sbjct 2899 GCAGCGGCTGATCTTCGCCGGGAAACAGCTCGAGGACGGGCGCACCCTCGCCGACTACAA 2840 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCG 24932 ||| || ||||| || || || ||| | || | || | ||||| |||| Sbjct 2839 CATCCAGAAGGAGTCTACTCTCCACCTCGTCCTCCGTCTCCGCGGTGGCG 2790 >seq37186 Length=985 Score = 118 bits (130), Expect = 1e-21 Identities = 147/199 (74%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||| ||||| |||| || || || || || || || || ||||| || ||| | | Sbjct 667 GATGCAAATCTTCGTTAAGACTCTCACTGGGAAGACGATCACCCTCGAGGTGGAAAGCTC 608 Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 |||||| | || |||| |||| | || ||| || |||||||| || || |||||||||| Sbjct 607 CGACACCATCGACAACGTTAAAGCCAA-GATTCAGGACAAAGAGGGTATCCCTCCCGATC 549 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881 | || | | ||||| |||||||||||| ||||||| |||| || | || || | Sbjct 548 AGCAGAGGCTTATCTTCGCCGGGAAACAGTTGGAGGACGGCAGAACATTGGCTGACTACA 489 Query 24882 ACATTCAAAAGGAATCGAC 24900 |||| ||||| || ||||| Sbjct 488 ACATCCAAAAAGAGTCGAC 470 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || |||| || | ||||| || || ||||| | || || || | || Sbjct 209 ATGCAGATTTTCGTTAAGACATTGACCGGCAAGACCATTACTTTGGAGGTGGAGAGCTCC 150 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| |||||||||||||| || || || ||||| || || Sbjct 149 GACACCATTGACAATGTCAAAGCTAAGATCCAAGACAAGGAGGGTATCCCTCCGGACCAG 90 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||| ||||| || ||||| || || |||| || | || || ||| Sbjct 89 CAGAGGTTGATCTTCGCCGGCAAGCAGCTTGAAGACGGCAGAACATTGGCGGACTACAAC 30 Query 24884 ATTCAAAAGGAATCGACACTACA 24906 || || ||||| || || || || Sbjct 29 ATCCAGAAGGAGTCTACTCTGCA 7 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/199 (70%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || ||||| || || || || ||||| || || | | Sbjct 437 ATGCAGATCTTCGTCAAGACCCTTACCGGAAAGACCATCACTCTCGAGGTGGAGAGCTCG 378 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || ||||| || ||||| || || || || Sbjct 377 GACACCATCGATAATGTCAAGGCTAAGATTCAGGACAAGGAGGGAATCCCACCGGACCAG 318 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCG--AGAAACATGTCAGATTATA 24881 || | |||||||||||||| || ||||| |||| ||| || | | | || || | Sbjct 317 CAGAGGTTGATCTTTGCCGGCAAGCAGCTCGAGG--TCGGCAGGACTCTCGCTGACTACA 260 Query 24882 ACATTCAAAAGGAATCGAC 24900 |||| |||||||| || || Sbjct 259 ACATCCAAAAGGAGTCAAC 241 >seq14782 Length=4961 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | ||||| ||||| || || || || || || || || ||| | || Sbjct 2195 ATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATAACCCTAGAGGTCGAATCATCC 2136 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || ||||| ||||| || || || || || Sbjct 2135 GACACGATCGACAATGTCAAGGCCAAGATTCAGGACAAGGAAGGGATCCCACCGGACCAG 2076 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| ||||||| |||||||| |||||||| || || | | | | ||||| ||| Sbjct 2075 CAGCGTCTGATCTTCGCCGGGAAGCAGCTGGAAGACGGAAGGACCCTCGCGGATTACAAC 2016 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| ||||| || ||| |||| | || || | ||||| Sbjct 2015 ATCCAGAAGGAGTCGACTCTTCACCTGGTTCTCCGTCTGAGAGGAGG 1969 >seq24793 Length=2311 Score = 114 bits (126), Expect = 1e-20 Identities = 165/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || | || ||||| || || || |||||||| || | | Sbjct 1385 ATGCAGATCTTTGTGAAGACCTTGACTGGTAAGACCATCACCCTCGAAGTTGAGAGCTCG 1326 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| ||||||||||| || ||||| || ||||| || || Sbjct 1325 GACACGATTGATAACGTGAAAGCCAAGATCCAAGATAAGGAAGGGATCCCTCCAGACCAG 1266 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTATA 24881 || ||| | ||||| || || || ||||| |||||| ||| || | | | || || | Sbjct 1265 CAGCGTCTCATCTTCGCTGGAAAGCAGCTCGAGGATGGTCG-GACTC-TCGCTGACTACA 1208 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 | || || ||||| || ||||| |||||||| ||||| |||| || || Sbjct 1207 ATATCCAGAAGGAGTCTACACTTCACTTGGTCTTGCGTCTGCGTGGTGG 1159 Score = 100 bits (110), Expect = 3e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| |||| || | || || || || ||||| || || || || | || Sbjct 1613 ATGCAGATCTTCGTTAAGACCTTGACGGGAAAGACGATTACCCTAGAGGTGGAGAGCTCC 1554 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| ||||||||||||||| || || || ||||| || || Sbjct 1553 GACACCATCGACAACGTCAAAGCAAAGATCCAAGACAAGGAGGGTATCCCTCCGGACCAG 1494 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||| ||||| || ||||| || || |||| || | || || ||| Sbjct 1493 CAGAGGTTGATCTTCGCCGGCAAGCAGCTTGAAGACGGCAGAACATTGGCGGACTACAAC 1434 Query 24884 ATTCAAAAGGAATCGACACTACA 24906 || || ||||| || || || || Sbjct 1433 ATCCAGAAGGAGTCTACTCTGCA 1411 >seq1703 Length=21771 Score = 113 bits (124), Expect = 4e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| |||| ||| | || || || || || || | || || || || Sbjct 18366 ATGCAGATCTTCGTTAAGACGTTGACAGGAAAGACGATCACTTTAGAGGTGGAGAGTTCC 18307 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| ||| | ||| |||||||||||||| || || ||||| || || Sbjct 18306 GACACCATTGACAACGTGAAAGCGAAA-ATCCAAGACAAAGAGGGTATCCCTCCGGACCA 18248 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | |||| || || ||||| ||||| |||||| | | | || | ||||| || Sbjct 18247 GCAGAGGCTGATATTCGCTGGGAAGCAGCTCGAGGATGGTCGCACCTTGGCTGATTACAA 18188 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 |||||| || || ||||| || ||||||||||| || | || || ||| Sbjct 18187 CATTCAGAAAGAGTCGACCCTTCACTTGGTGTTACGTCTCCGTGGTGGC 18139 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || ||||| || ||||| || | || || || | | Sbjct 18138 ATGCAGATCTTTGTCAAGACTCTTACCGGGAAGACTATCACATTGGAGGTTGAGAGCTCT 18079 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| ||||| || ||||| ||||| Sbjct 18078 GACACTATTGACAACGTGAAGGCTAAGATCCAGGACAAGGAAGGTATCCCTCCGGATCAG 18019 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||| || || || ||||| |||||| | | | || |||| || || Sbjct 18018 CAGCGTCTCATCTTCGCTGGAAAGCAGCTCGAGGATGGTCGCACCTTGGCAGACTACAAT 17959 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || ||||| ||||| || |||||||| Sbjct 17958 ATCCAGAAGGAGTCGACTCTTCACTTGGT 17930 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || | || || || |||||||| | || || || | || Sbjct 18594 ATGCAGATCTTTGTCAAGACTTTGACTGGAAAGACTATTACTTTGGAGGTGGAGAGCTCC 18535 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || ||||| || || || ||||| || || || || || Sbjct 18534 GATACTATTGACAATGTCAAGGCTAAGATTCAGGATAAGGAAGGGATCCCACCTGACCAG 18475 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | ||||||||||||||||| ||| |||||||| ||| | | | || || ||| Sbjct 18474 CAGAGGTTGATCTTTGCCGGGAAGCAGTTGGAGGATGGGAGGACTCTTGCTGACTACAAC 18415 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || || ||||| || || |||||||| ||||| | || |||||| Sbjct 18414 ATCCAGAAAGAATCTACGCTTCACTTGGTCTTGCGTCTACGTGGAGGC 18367 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || ||||| || ||||| || | || || || | | Sbjct 18822 ATGCAGATCTTCGTCAAGACTCTTACCGGAAAGACTATCACTTTGGAGGTGGAGAGCTCT 18763 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| | || | || || ||||| ||||| || ||||| || ||||| ||||| Sbjct 18762 GATACAATCGACAACGTCAAGGCTAAGATACAAGATAAGGAAGGGATCCCTCCGGATCAG 18703 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||||| || || ||| |||||||| ||| | | | |||||||| Sbjct 18702 CAGAGGCTGATCTTTGCGGGAAAGCAGTTGGAGGATGGGAGGACTCTTGCTGATTATAAT 18643 Query 24884 ATTCAAAAGGAATCGACACTACA 24906 || || ||||| ||||| || || Sbjct 18642 ATACAGAAGGAGTCGACTCTGCA 18620 >seq11485 Length=6519 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || || ||||||||||| ||||| || ||||| || | | Sbjct 4934 ATGCAGATTTTCGTCAAGACACTCACCGGTAAAACCATTACCCTTGAAGTGGAGAGCTCT 4993 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| ||||| || ||||| ||||| || ||||| || || Sbjct 4994 GACACGATCGACAATGTGAAAGCGAAGATTCAGGACAAGGAAGGCATCCCTCCGGACCAG 5053 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | | ||||| || ||||||||||| |||||| | | || | ||||| ||| Sbjct 5054 CAGAGACTCATCTTCGCTGGGAAACAGCTCGAGGATGGTCGGACTTTGGCTGATTACAAC 5113 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || ||||| || || || |||||||| Sbjct 5114 ATCCAGAAGGAGTCTACTCTTCACTTGGT 5142 >seq12662 Length=5898 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || | || ||||| || || || |||||||| || | | Sbjct 3717 ATGCAGATCTTCGTGAAGACCTTGACTGGTAAGACCATCACCCTCGAAGTTGAGAGCTCG 3776 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| ||||||||||| || ||||| || ||||| || || Sbjct 3777 GACACGATTGATAACGTGAAAGCCAAGATCCAAGATAAGGAAGGCATCCCTCCAGACCAG 3836 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||| || || || ||||| |||||| | | | | | || || ||| Sbjct 3837 CAGCGTCTCATCTTCGCTGGAAAGCAGCTTGAGGATGGTCGCACCCTTGCCGACTACAAC 3896 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 || || ||||| || || | |||||||||||||| Sbjct 3897 ATCCAGAAGGAGTCAACCATTCACTTGGTGTTGCG 3931 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| |||| || | || || || || ||||| || || || || | || Sbjct 3489 ATGCAGATCTTCGTTAAGACCTTGACGGGAAAGACGATTACCCTAGAGGTGGAGAGCTCC 3548 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| ||||||||||||||| || || || || || || || Sbjct 3549 GACACCATCGACAACGTCAAAGCAAAGATCCAAGACAAGGAGGGGATCCCACCGGACCAG 3608 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||| || || || ||||| || || |||| | | || || ||| Sbjct 3609 CAGAGGTTGATCTTCGCAGGCAAGCAGCTTGAAGACGGCAGAACTCTCGCTGACTACAAC 3668 Query 24884 ATTCAAAAGGAATCGACACTACA 24906 || || ||||| || || || || Sbjct 3669 ATCCAGAAGGAGTCTACTCTGCA 3691 >seq3737 Length=14779 Score = 104 bits (114), Expect = 2e-17 Identities = 124/166 (75%), Gaps = 2/166 (1%) Strand=Plus/Minus Query 24695 ATTGATACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTA 24754 ||| || ||||||||| || |||| || || ||||| || || || || ||||| || Sbjct 9518 ATTTATCAGATGCAGATATTCGTTAAGACTCTTACCGGAAAGACGATCACCCTCGAGGTT 9459 Query 24755 GAAGCCACCGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACC 24813 ||| | ||||||| | || |||| || | | || |||||| || || ||||| || || Sbjct 9458 GAAAGCTCCGACACGATCGACAACGTTACAGCCAA-GATCCACGATAAGGAAGGTATCCC 9400 Query 24814 TCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT 24859 ||||||||| || | |||||||| ||||| || ||||| || ||| Sbjct 9399 TCCCGATCAGCAGAGGTTGATCTTCGCCGGTAAGCAGCTCGAAGAT 9354 >seq806 Length=29032 Score = 98.7 bits (108), Expect = 9e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | ||||| ||||| || || || || || ||||| || || || | Sbjct 18177 GATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATAACCCTCGAGGTCGAGTCCTC 18118 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | || | || || |||||||| ||||| ||||| || || || || || Sbjct 18117 CGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGGATCCCGCCGGACCA 18058 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || || ||||||| |||||||| ||||| || || | | | | || || || Sbjct 18057 GCAGCGACTGATCTTCGCCGGGAAGCAGCTCGAAGACGGCCGCACACTCGCCGACTACAA 17998 Query 24883 CATTCAAAAGGAATCGACACTACA 24906 ||| || ||||| ||||| || || Sbjct 17997 CATCCAGAAGGAGTCGACGCTTCA 17974 >seq964 Length=27231 Score = 89.7 bits (98), Expect = 5e-13 Identities = 152/217 (70%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | || || || || || ||||| || || | || || || | | Sbjct 10177 ATGCAGATTTTTGTGAAGACCCTCACTGGCAAAACCATCACTTTGGAGGTGGAGAGCTCT 10236 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || ||||| ||||| || || || || || Sbjct 10237 GACACGATCGATAACGTCAAGGCTAAGATTCAGGACAAGGAAGGGATCCCACCGGACCAG 10296 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTATA 24881 || | | ||||| || ||||||||||| |||||| ||| | | || ||||||| | Sbjct 10297 CAGAGACTCATCTTCGCTGGGAAACAGCTTGAGGATGGTCG-TACGCTTG-CAGATTACA 10354 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 | || || ||||| ||||| || ||| | |||||||| Sbjct 10355 ATATCCAGAAGGAGTCGACCCTTCACCTTGTGTTGCG 10391 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || | || || || || || || || || || || | || Sbjct 9721 ATGCAGATCTTCGTCAAGACTTTGACGGGAAAGACCATCACTCTGGAGGTTGAGAGCTCC 9780 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || ||||| ||||| Sbjct 9781 GACACTATTGACAATGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCTCCGGATCAG 9840 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | | || ||||| || || |||||||||||| | | | | || || ||| Sbjct 9841 CAGAGGCTTATTTTTGCTGGTAAGCAGCTGGAGGATGGTCGCACGCTCGCTGACTACAAC 9900 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 || || ||||| ||||| || ||| | || ||||| Sbjct 9901 ATCCAGAAGGAGTCGACGCTTCACCTTGTCTTGCG 9935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449533565356960