Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raphanus_20raphanistrum_20subsp._20raphanistrum_20[genbank_20GCA_5F0 00769845.1_202014-10-28] 64,732 sequences; 253,833,977 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq1703 141 7e-29 seq25552 109 4e-19 seq14782 109 4e-19 seq964 109 4e-19 seq4867 100 2e-16 seq2054 100 2e-16 seq1346 100 2e-16 seq7348 96.9 3e-15 seq4396 95.1 9e-15 seq24793 84.2 2e-11 seq14792 84.2 2e-11 seq13765 84.2 2e-11 seq12662 84.2 2e-11 >seq1703 Length=21771 Score = 141 bits (156), Expect = 7e-29 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| | |||||| ||||| || || ||||| |||||||| ||||| || | ||||||| Sbjct 18151 ACGTAACACCAAGTGAAGGGTCGACTCTTTCTGAATGTTGTAATCAGCCAAGGTGCGACC 18210 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| ||||| || || ||||| |||||| || ||||| ||||| || ||||||||||| Sbjct 18211 ATCCTCGAGCTGCTTCCCAGCGAATATCAGCCTCTGCTGGTCCGGAGGGATACCCTCTTT 18270 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 |||||| | ||| ||| || | || | ||||| ||| || || || | ||| || Sbjct 18271 GTCTTGGATTTTCGCTTTCACGTTGTCAATGGTGTCGGAACTCTCCACCTCTAAAGTGAT 18330 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || || ||||| || |||||||| Sbjct 18331 CGTCTTTCCTGTCAACGTCTTAACGAAGATCTGCAT 18366 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || ||||| ||||| || || || || || || || || || || | ||||||| Sbjct 17923 ACGGAGGACCAAGTGAAGAGTCGACTCCTTCTGGATATTGTAGTCTGCCAAGGTGCGACC 17982 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| ||||| || || ||||| | || | | ||||||||||| || ||||| || || Sbjct 17983 ATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCCGGAGGGATACCTTCCTT 18042 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || || || | || | ||||||||| || || || | || || Sbjct 18043 GTCCTGGATCTTAGCCTTCACGTTGTCAATAGTGTCAGAGCTCTCAACCTCCAATGTGAT 18102 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| || || || | || || ||||| |||||||| Sbjct 18103 AGTCTTCCCGGTAAGAGTCTTGACAAAGATCTGCAT 18138 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | | ||||| ||||| |||||||| || || || || || || ||||| || Sbjct 18824 CCTCCACGTAGACGCAAGACCAAGTGAAGCGTAGACTCCTTCTGGATATTGTAATCGGCC 18883 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||||| ||| ||||| || || || || | || | | ||||||||||| || Sbjct 18884 AAGGTGCGACCATCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGAGGG 18943 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || || ||||| || | || ||| || | || | ||||| || ||| || Sbjct 18944 ATCCCTTCCTTGTCCTGGATCTTGGCTTTCACGTTGTCGATGGTGTCGGAGCTTTCCACC 19003 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || || || || || || || || | ||||| || || || ||||| || Sbjct 19004 TCGAGGGTGATTGTCTTCCCGGTGAGAGTTTTCACGAAGATTTGCATCTT 19053 >seq25552 Length=2169 Score = 109 bits (120), Expect = 4e-19 Identities = 138/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 29597 CTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATA 29656 |||| || ||||| || || || | || || ||| ||||| ||||| || || | | Sbjct 434 CTTTCTGGATGTTGTAGTCAGCCAAAGTACGGCCATCTTCGAGCTGTTTACCGGCGAAGA 375 Query 29657 TCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTT 29716 ||| | ||||||||||| || ||||| ||||||||||| | || ||||||| | | Sbjct 374 TCAGACGCTGCTGATCCGGAGGGATACCTTCTTTGTCTTGGATCTTGGCTTTGACATTGT 315 Query 29717 CTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAA 29776 | | ||||| || || ||||| ||||| || || ||||| |||| |||||| || | Sbjct 314 CGATGGTGTCGGAGGACTCGACTTCGAGAGTGATGGTCTTGCCCGTTAGGGTTTTCACGA 255 Query 29777 ATATCTGCAT 29786 | |||||||| Sbjct 254 AGATCTGCAT 245 >seq14782 Length=4961 Score = 109 bits (120), Expect = 4e-19 Identities = 165/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 |||||| |||| ||| || |||| ||||| || || || || || ||||| |||||||| Sbjct 1968 TCCTCCTCTCAGACGGAGAACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCCGC 2027 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | ||| | || || || || || || || | |||| | ||||| ||||| || Sbjct 2028 GAGGGTCCTTCCGTCTTCCAGCTGCTTCCCGGCGAAGATCAGACGCTGCTGGTCCGGTGG 2087 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 || || || ||||| || ||| || | |||||| | || | ||||| || ||| | Sbjct 2088 GATCCCTTCCTTGTCCTG-AATCTTGGCCTTGACATTGTCGATCGTGTCGGATGATTCGA 2146 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 | || || ||||| || || || |||| |||||| || || ||||||||||| Sbjct 2147 CCTCTAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATTTT 2198 >seq964 Length=27231 Score = 109 bits (120), Expect = 4e-19 Identities = 156/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||||| ||| | ||||| || || || || || || || ||||| |||| || ||| Sbjct 10392 ACGCAACACAAGGTGAAGGGTCGACTCCTTCTGGATATTGTAATCTGCAAGCGTACGACC 10333 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || ||||| ||||| | || | ||| ||||| ||||| || || || || || Sbjct 10332 ATCCTCAAGCTGTTTCCCAGCGAAGATGAGTCTCTGCTGGTCCGGTGGGATCCCTTCCTT 10273 Query 29691 GTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 ||| || ||| || | ||||| | || | |||||||| || || || | ||| | Sbjct 10272 GTCCTG-AATCTTAGCCTTGACGTTATCGATCGTGTCAGAGCTCTCCACCTCCAAAGTGA 10214 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | ||||||||||| | ||| || ||||| |||||||| Sbjct 10213 TGGTTTTGCCAGTGAGGGTCTTCACAAAAATCTGCAT 10177 Score = 102 bits (112), Expect = 6e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||||| || | |||||||| || || || || ||||| || || || | |||||| Sbjct 9936 ACGCAAGACAAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCAGCGAGCGTGCGACC 9877 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || || |||||| | || | || ||||||||||| || || ||||| || Sbjct 9876 ATCCTCCAGCTGCTTACCAGCAAAAATAAGCCTCTGCTGATCCGGAGGGATGCCCTCCTT 9817 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || |||||| | || | |||||| || || || || ||||| || Sbjct 9816 GTCCTGGATCTTCGCCTTGACATTGTCAATAGTGTCGGAGCTCTCAACCTCCAGAGTGAT 9757 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || || || || || |||||||| Sbjct 9756 GGTCTTTCCCGTCAAAGTCTTGACGAAGATCTGCAT 9721 Score = 95.1 bits (104), Expect = 9e-15 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || ||||| | ||| ||||| || ||||| |||||||| || || || | ||||| | Sbjct 10163 CGAAGCACAAGATGCAGCGTAGACTCTTTCTGAATGTTGTAGTCAGCTAGCGTGCGTCCA 10104 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || || || || || ||| | || | || ||||| ||||| || ||||||||||| Sbjct 10103 TCCTCCAGCTGCTTACCGGCAAAGATGAGCCTCTGCTGGTCCGGTGGGATACCCTCTTTA 10044 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 || || | || ||||| | || | ||||| || || || || | ||| || Sbjct 10043 TCCTGGATCTTAGCCTTGACGTTGTCAATGGTGTCTGAGCTCTCAACCTCCAAAGTGATG 9984 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || || | ||| || ||||| || ||||| Sbjct 9983 GTTTTACCGGTGAGGGTCTTGACAAAGATTTGCAT 9949 >seq4867 Length=12713 Score = 100 bits (110), Expect = 2e-16 Identities = 105/138 (76%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || ||||| | | ||| ||||| ||||| ||||| ||||| |||||||| || || | | Sbjct 7580 CCACCCCTAAGCCTCAGAACCAAGTGAAGAGTGGACTCTTTCTGAATGTTGTAGTCAGAA 7639 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || ||| ||| || |||||||| |||||| | || | ||| || ||||| || || Sbjct 7640 AGCGTTCGACCATCCTCTAGTTGTTTCCCAGCAAAGATGAGTCTCTGTTGATCTGGTGGT 7699 Query 29680 ATACCCTCTTTGTCTTGT 29697 || ||||||||||| ||| Sbjct 7700 ATCCCCTCTTTGTCCTGT 7717 >seq2054 Length=20018 Score = 100 bits (110), Expect = 2e-16 Identities = 138/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 29597 CTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATA 29656 |||| || ||||| || || || | || || ||| ||||| ||||| || || | | Sbjct 3204 CTTTCTGGATGTTGTAGTCAGCCAAAGTACGGCCATCTTCGAGCTGTTTACCGGCGAAGA 3263 Query 29657 TCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTT 29716 ||||||| |||||||| || || ||||| ||||||||||| | || |||||| | | Sbjct 3264 TCAATCTCTGCTGATCTGGAGGGATACCTTCTTTGTCTTGGATCTTGGCCTTGACATTGT 3323 Query 29717 CTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAA 29776 | | ||||| || || || || || || || || || || |||| |||||| || | Sbjct 3324 CGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTTCCGGTTAGGGTTTTCACGA 3383 Query 29777 ATATCTGCATTTT 29789 | |||||||| || Sbjct 3384 AGATCTGCATCTT 3396 >seq1346 Length=23970 Score = 100 bits (110), Expect = 2e-16 Identities = 105/138 (76%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || ||||| | | || ||||| ||||| || || ||||| || ||||| || |||||| Sbjct 5917 CCACCCCTAAGCCTCAAGACCAAGTGAAGAGTTGACTCTTTCTGGATGTTGTAGTCCGCA 5858 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| | | ||| || |||||||||||||| |||||| || || |||||||| || Sbjct 5857 AGGGTTCTACCATCTTCAAGTTGTTTGCCAGCGAATATCAGCCTCTGTTGATCCGGTGGT 5798 Query 29680 ATACCCTCTTTGTCTTGT 29697 || ||||| ||||| ||| Sbjct 5797 ATTCCCTCCTTGTCCTGT 5780 >seq7348 Length=9517 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || |||| ||||| || || || || || ||||| || || || | ||||||| Sbjct 440 ACGGAGGGCCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCTGCTAAGGTGCGACC 381 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || || ||||| | || | | ||||||||||| || || || || || Sbjct 380 ATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCCGGAGGGATGCCTTCCTT 321 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || || || | || | |||||||| || || ||||| || || Sbjct 320 GTCCTGGATCTTGGCCTTTACGTTGTCAATGGTGTCAGAGCTCTCCACCTCAAGTGTGAT 261 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || ||||| ||||| || || ||||||||||| Sbjct 260 GGTCTTACCAGTCAAGGTCTTCACGAATATCTGCAT 225 >seq4396 Length=13502 Score = 95.1 bits (104), Expect = 9e-15 Identities = 159/225 (71%), Gaps = 5/225 (2%) Strand=Plus/Minus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 || || | |||||| || || |||||||| ||||| || || || | || || ||| Sbjct 12042 AGGACAAGATGAAGGGTCGACTCTTTTTGGATGTTGTAGTCAGCGAGAGTACGCCCATCT 11983 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || ||||| || || || | || | || ||||||||||| ||||| || || ||||| Sbjct 11982 TCAAGTTGCTTCCCGGCGAAGATAAGCCTCTGCTGATCCGGGGGAATGCCTTCCTTGTCC 11923 Query 29695 TGTAATTTTTGTTTGACAGTT-TCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 || ||| || | || | ||| || | ||||| || ||| || || || || || || Sbjct 11922 TG-AATCTTGGCTTTAACGTTGTCGATGGTGTCTGAGCTTTCCACCTCGAGGGTGATCGT 11864 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCAT-TTTA--AAACG 29795 || || || | || ||||| ||||||||||| |||| ||||| Sbjct 11863 CTTTCCGGTGAGAGTCTTAACGAATATCTGCATCTTTAGTAAACG 11819 >seq24793 Length=2311 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 || || | |||||| || || || || || ||||| ||||| || | || | || Sbjct 1630 AGAACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAATCAGCGAGAGTCCTGCCGTCC 1689 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 ||||| || || || || | || | || ||||||||||| ||||| ||||| ||||| Sbjct 1690 TCGAGCTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGGGGAATGCCCTCCTTGTCC 1749 Query 29695 TGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 || ||| || | ||| || | || | ||||| || ||| || || || || || || Sbjct 1750 TG-AATCTTGGCTTTAACGTTGTCGATGGTGTCTGAGCTTTCCACCTCGAGGGTGATTGT 1808 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || | || |||||||| |||||||| Sbjct 1809 CTTTCCCGTGAGAGTCTTAACAAAAATCTGCAT 1841 >seq14792 Length=4957 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 ||||| |||| || || || || | || || || || || | || ||| ||| || Sbjct 2956 ACCAAGTGAATGGTTGAATCCTTCTTGATATTGTAGTCAGCCAATGTCCGACCATCCTCA 2897 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTG 29696 || ||| |||||||| |||||| ||| ||||| |||||||||||||||||||| || || Sbjct 2896 AGCTGTCTGCCAGCAAATATCAGTCTCTGCTGGTCCGGCGGAATACCCTCTTTATCCTG 2838 >seq13765 Length=5394 Score = 84.2 bits (92), Expect = 2e-11 Identities = 151/218 (69%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| ||||| | ||||| || || || ||||| ||||||||||| |||| || | Sbjct 2939 ACGAAGCACAAGGTGAAGTGTTGACTCCTTTTGGATGTTATAATCTGCAAGCCTGTAACC 2998 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || |||||| | | |||| |||| | ||| ||||| || || | || || || | Sbjct 2999 ATCCTCCAGTTGTCTACTAGCAAATATGAGTCTCTGCTGGTCTGGTGCGATTCCTTCCAT 3058 Query 29691 GTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 ||| || ||| ||||| || ||| | | || ||||| || || ||||| | | | Sbjct 3059 GTCCTG-AATCTTTGTCTTTACACTGTAAACGGTGTCTGAGCTATCAACTTCTAAGGCAA 3117 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 | ||| ||| | ||||| |||||||| |||||| Sbjct 3118 TGACTTTAGAAGTGATTGTTTTCACAAATATTTGCATT 3155 >seq12662 Length=5898 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 || || | |||||| || || || || || ||||| ||||| || | || | || Sbjct 3472 AGAACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAATCAGCGAGAGTCCTGCCGTCC 3413 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 ||||| || || || || | || | || ||||||||||| ||||| ||||| ||||| Sbjct 3412 TCGAGCTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGGGGAATGCCCTCCTTGTCC 3353 Query 29695 TGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 || ||| || | ||| || | || | ||||| || ||| || || || || || || Sbjct 3352 TG-AATCTTGGCTTTAACGTTGTCGATGGTGTCTGAGCTTTCCACCTCGAGGGTGATTGT 3294 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || | || |||||||| |||||||| Sbjct 3293 CTTTCCCGTGAGAGTCTTAACAAAAATCTGCAT 3261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 384915292387212