Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raphanus_20raphanistrum_20subsp._20raphanistrum_20[genbank_20GCA_5F0 00769845.1_202014-10-28] 64,732 sequences; 253,833,977 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq11485 159 7e-34 seq24793 158 2e-33 seq4396 156 8e-33 seq1703 156 8e-33 seq964 150 4e-31 seq14782 138 2e-27 seq37186 136 8e-27 seq12662 129 1e-24 seq7912 123 5e-23 seq7348 120 6e-22 seq4867 118 2e-21 seq3737 109 1e-18 seq10768 102 2e-16 seq2054 95.1 2e-14 seq806 84.2 4e-11 >seq11485 Length=6519 Score = 159 bits (176), Expect = 7e-34 Identities = 175/230 (76%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || | || || ||||| || ||||| ||||| ||||| | Sbjct 4934 TACCACCACGGAGACGGAGGACGAGATGAAGCGTAGACTCCTTCTGAATATTGTAATCCG 4875 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 || | | || || || || ||||| ||||| ||||| ||||| || || || |||| Sbjct 4874 CAAGCGTGCGTCCATCCTCAAGCTGTTTACCAGCGAAGATGAGTCTCTGCTGGTCCGGAG 4815 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCT 82760 | ||||||||||| || || ||||||||||| ||||| ||||| || || || | || Sbjct 4814 GAATTCCTTCCTTGTCCTGGATCTTTGCTTTCACATTGTCAATAGTGTCGG-AGCTCTCA 4756 Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || |||||||| || |||||||||||||| ||||| ||||| |||||||| Sbjct 4755 ACCTCCAAAGTGATGGTCTTGCCTGTCAAAGTCTTGACAAAAATCTGCAT 4706 Score = 111 bits (122), Expect = 3e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || | || ||||| || || ||||| || || ||||| | Sbjct 4706 TACCACCACGGAGACGAAGTACGAGATGGAGAGTTGACTCCTTCTGGATGTTGTAATCGG 4647 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 || | | ||||||||||| || || ||||| ||||| || || || || || |||| Sbjct 4646 CCAGGGTGCGTCCGTCTTCTAGCTGCTTCCCAGCGAAGATGAGCCTCTGCTGGTCGGGAG 4587 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCT 82760 | || |||||||| || || |||||||| || ||||| || || || || || | || Sbjct 4586 GGATGCCTTCCTTGTCCTGGATCTTTGCCTTGACATTGTCTATAGTGTC-GGAGCTCTCG 4528 Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || | ||| || |||||||| || | || || || || || ||||| Sbjct 4527 ACCTCGAGAGTGATGGTCTTGCCGGTGAGTGTTTTCACGAAAATTTGCAT 4478 >seq24793 Length=2311 Score = 158 bits (174), Expect = 2e-33 Identities = 174/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| || | || ||||| || ||||| || ||||| || ||||| ||||| || |||| Sbjct 1158 ACCACCACGCAGACGCAAGACCAAGTGAAGTGTAGACTCCTTCTGGATATTGTAGTCAGC 1217 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 ||| | | ||| || || || || |||||||| ||||| || | || || |||||||| Sbjct 1218 GAGAGTCCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGAGG 1277 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTA 82761 || |||||||||||||| ||||| ||||| || || |||||||| || || | || | Sbjct 1278 GATCCCTTCCTTATCTTGGATCTTGGCTTTCACGTTATCAATCGTGTC-CGAGCTCTCAA 1336 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| | || || ||||| || ||||| ||||| ||||| |||||||| Sbjct 1337 CTTCGAGGGTGATGGTCTTACCAGTCAAGGTCTTCACAAAGATCTGCAT 1385 Score = 120 bits (132), Expect = 6e-22 Identities = 156/213 (73%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658 ||||| | ||||||||||| || ||||| || || || || | | |||| |||||| Sbjct 1402 AGAACGAGATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCCGCCAATGTTCTGCCGTCT 1461 Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718 || || || || || || ||||| | || || || || ||||| || || ||||| ||| Sbjct 1462 TCAAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATACCCTCCTTGTCT 1521 Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTATCGT 82777 || ||||||||||| || || || || || || || | || || || | || ||||| Sbjct 1522 TGGATCTTTGCTTTGACGTTGTCGATGGTGTC-GGAGCTCTCCACCTCTAGGGTAATCGT 1580 Query 82778 CTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||| || ||||| ||||| || || |||||||| Sbjct 1581 CTTTCCCGTCAAGGTCTTAACGAAGATCTGCAT 1613 >seq4396 Length=13502 Score = 156 bits (172), Expect = 8e-33 Identities = 174/230 (76%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| || | || ||||| || ||||| || ||||| || ||||| ||||| || |||| Sbjct 557 ACCACCACGCAGACGCAAGACCAAGTGAAGTGTAGACTCCTTCTGGATATTGTAGTCAGC 498 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 ||| | || ||||| || || || |||||||| ||||| || | || || |||||||| Sbjct 497 GAGAGTCCTGCCGTCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGAGG 438 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTA 82761 || |||||||||||||| ||||| ||||| || || |||||||| || || | || | Sbjct 437 GATCCCTTCCTTATCTTGGATCTTGGCTTTCACGTTATCAATCGTGTC-CGAGCTCTCCA 379 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 | |||| || || ||||| || ||||| ||||| || || || |||||| Sbjct 378 CCTCCAGTGTGATGGTCTTACCAGTCAAGGTCTTGACGAAGATTTGCATT 329 Score = 113 bits (124), Expect = 9e-20 Identities = 149/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || || || || ||||| || || || || |||| ||| | | || ||||| ||||| Sbjct 12033 TGAAGGGTCGACTCTTTTTGGATGTTGTAGTCAGCGAGAGTACGCCCATCTTCAAGTTGC 11974 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || || || ||||| || || || ||||| || || || |||||||| || |||||||| Sbjct 11973 TTCCCGGCGAAGATAAGCCTCTGCTGATCCGGGGGAATGCCTTCCTTGTCCTGAATCTTG 11914 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTT-CTACTTCCAAAGTTATCGTCTTGCCTGT 82786 ||||| || || || || || || | || || | || || | || |||||||| || || Sbjct 11913 GCTTTAACGTTGTCGATGGTGTC-TGAGCTTTCCACCTCGAGGGTGATCGTCTTTCCGGT 11855 Query 82787 CAACGTCTTTACAAATATCTGCAT 82810 | ||||| || ||||||||||| Sbjct 11854 GAGAGTCTTAACGAATATCTGCAT 11831 >seq1703 Length=21771 Score = 156 bits (172), Expect = 8e-33 Identities = 164/213 (77%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658 ||||| | |||||||| || || ||||||||||||||||||| ||| | || || || Sbjct 18611 AGAACGAGATGCAGAGTCGACTCCTTCTGTATATTATAATCAGCAAGAGTCCTCCCATCC 18670 Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718 || | || ||||| |||||||| || || || ||||| ||||| || |||||||||||| Sbjct 18671 TCCAACTGCTTTCCCGCAAAGATCAGCCTCTGCTGATCCGGAGGGATCCCTTCCTTATCT 18730 Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTATCGT 82777 || ||||| || || || || || || |||||| || | || || |||||||| || || Sbjct 18731 TGTATCTTAGCCTTGACGTTGTCGATTGTATCA-GAGCTCTCCACCTCCAAAGTGATAGT 18789 Query 82778 CTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||| || || | ||||| || || |||||||| Sbjct 18790 CTTTCCGGTAAGAGTCTTGACGAAGATCTGCAT 18822 Score = 152 bits (168), Expect = 1e-31 Identities = 172/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||| | | ||||| || ||||| || |||||||||||||| || || || |||| Sbjct 18368 CCTCCACGTAGACGCAAGACCAAGTGAAGCGTAGATTCTTTCTGGATGTTGTAGTCAGCA 18427 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 ||| | || || || || | || || || |||||||| | || || || || || || Sbjct 18428 AGAGTCCTCCCATCCTCCAACTGCTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGTGGG 18487 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTAC 82762 || ||||||||||| |||||||| || || ||||| ||||| ||||| || | || || Sbjct 18488 ATCCCTTCCTTATCCTGAATCTTAGCCTTGACATTGTCAATAGTATC-GGAGCTCTCCAC 18546 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||| || ||||| || ||||| ||||| ||||| |||||||| Sbjct 18547 CTCCAAAGTAATAGTCTTTCCAGTCAAAGTCTTGACAAAGATCTGCAT 18594 Score = 125 bits (138), Expect = 1e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 82602 ACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCT 82661 || ||||| || || || |||||||| || || ||||||| | | | ||| || || Sbjct 18158 ACCAAGTGAAGGGTCGACTCTTTCTGAATGTTGTAATCAGCCAAGGTGCGACCATCCTCG 18217 Query 82662 AGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGA 82721 || || || ||||| || || || || || || || ||||| || || || || ||||| Sbjct 18218 AGCTGCTTCCCAGCGAATATCAGCCTCTGCTGGTCCGGAGGGATACCCTCTTTGTCTTGG 18277 Query 82722 ATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTG 82781 || || ||||| || || ||||| || || | || || || ||||| |||||||| Sbjct 18278 ATTTTCGCTTTCACGTTGTCAATGGTGTCGGAACTCTCCACCTCTAAAGTGATCGTCTTT 18337 Query 82782 CCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||||||||| || || |||||||| Sbjct 18338 CCTGTCAACGTCTTAACGAAGATCTGCAT 18366 >seq964 Length=27231 Score = 150 bits (166), Expect = 4e-31 Identities = 165/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| ||||| ||||| || || || || ||||| ||||| || |||| || | | ||| Sbjct 10620 ACGAAGAACCAAGTGAAGCGTCGACTCCTTCTGGATATTGTAGTCAGCAAGCGTGCGACC 10561 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 || || || || || ||||| ||||| ||||| ||||| || ||||| || |||||||| Sbjct 10560 ATCCTCAAGCTGCTTACCAGCGAAGATGAGTCTCTGTTGGTCCGGAGGGATCCCTTCCTT 10501 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTA 82773 || ||||| || || || ||||| || || || || | || | || |||||||| || | Sbjct 10500 GTCCTGAATTTTAGCCTTCACATTGTCGATTGTGTC-TGAGCTCTCAACTTCCAAGGTAA 10442 Query 82774 TCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | ||||||||||||| ||||| ||||| || ||||| Sbjct 10441 TAGTCTTGCCTGTCAGAGTCTTCACAAAGATTTGCAT 10405 >seq14782 Length=4961 Score = 138 bits (152), Expect = 2e-27 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 |||||||||| ||| ||||| | ||| ||||| || || ||||| || || ||||| | Sbjct 1969 CCTCCTCTCAGACGGAGAACCAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCCGCG 2028 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | || |||||||| || || || || || ||||| || | || || || || || Sbjct 2029 AGGGTCCTTCCGTCTTCCAGCTGCTTCCCGGCGAAGATCAGACGCTGCTGGTCCGGTGGG 2088 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || |||||||| || |||||||| || || ||||| || ||||| || | ||| || Sbjct 2089 ATCCCTTCCTTGTCCTGAATCTTGGCCTTGACATTGTCGATCGTGTCGGATGATTCGACC 2148 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTATT 82814 || | ||||||||||| || || | || || || || ||||||||| || Sbjct 2149 TCTAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATTTTT 2199 >seq37186 Length=985 Score = 136 bits (150), Expect = 8e-27 Identities = 154/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 ||||||||||| || ||||| || || || || | | |||| |||||||| || || Sbjct 7 TGCAGAGTAGACTCCTTCTGGATGTTGTAGTCCGCCAATGTTCTGCCGTCTTCAAGCTGC 66 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || || || ||||| | || || || || ||||| || || ||||| ||||| ||||| Sbjct 67 TTGCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATACCCTCCTTGTCTTGGATCTTA 126 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTATCGTCTTGCCTGT 82786 ||||| ||||| ||||| || || || | || || |||||||| || |||||||| || Sbjct 127 GCTTTGACATTGTCAATGGTGTC-GGAGCTCTCCACCTCCAAAGTAATGGTCTTGCCGGT 185 Query 82787 CAACGTCTTTACAAATATCTGCAT 82810 ||| ||||| || || |||||||| Sbjct 186 CAATGTCTTAACGAAAATCTGCAT 209 >seq12662 Length=5898 Score = 129 bits (142), Expect = 1e-24 Identities = 158/213 (74%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658 ||||| | ||||||||||| || ||||| || || || |||| ||| |||| |||||| Sbjct 3700 AGAACGAGATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCAGCGAGAGTTCTGCCGTCT 3641 Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718 || || || || || || ||||| | || || || || || || || || ||||| ||| Sbjct 3640 TCAAGCTGCTTGCCTGCGAAGATCAACCTCTGCTGGTCCGGTGGGATCCCCTCCTTGTCT 3581 Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTATCGT 82777 || ||||||||||| || || || || || || || | || || || | || ||||| Sbjct 3580 TGGATCTTTGCTTTGACGTTGTCGATGGTGTC-GGAGCTCTCCACCTCTAGGGTAATCGT 3522 Query 82778 CTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||| || ||||| ||||| || || |||||||| Sbjct 3521 CTTTCCCGTCAAGGTCTTAACGAAGATCTGCAT 3489 Score = 127 bits (140), Expect = 4e-24 Identities = 160/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||||| || ||||| | || || || ||||| || || || || | || | | ||| Sbjct 3932 ACGCAACACCAAGTGAATGGTTGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGACC 3873 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 || || || || |||||||| ||||| || | || || |||||||| || |||||||| Sbjct 3872 ATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGGATGCCTTCCTT 3813 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTA 82773 |||||| ||||| ||||| || || |||||||| || || | || ||||| | || | Sbjct 3812 ATCTTGGATCTTGGCTTTCACGTTATCAATCGTGTC-CGAGCTCTCAACTTCGAGGGTGA 3754 Query 82774 TCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | ||||| || ||||| ||||| || || |||||||| Sbjct 3753 TGGTCTTACCAGTCAAGGTCTTCACGAAGATCTGCAT 3717 >seq7912 Length=9007 Score = 123 bits (136), Expect = 5e-23 Identities = 159/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||||| || ||||| || || || || || || ||||| || || | || | | ||| Sbjct 6119 ACGCAACACCAAGTGAAGTGTGGACTCCTTTTGGATATTGTAGTCGGCTAAGGTGCGACC 6178 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 || || || || || ||||| ||||| || | || || || ||||| || |||||||| Sbjct 6179 ATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTT 6238 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTA 82773 ||| || ||||| || || ||||| ||||| || ||| || | || || ||||| || | Sbjct 6239 ATCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCA-GAGCTCTCCACCTCCAACGTGA 6297 Query 82774 TCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | |||||||| || | ||||| ||||| |||||||| Sbjct 6298 TGGTCTTGCCGGTAAGTGTCTTGACAAAGATCTGCAT 6334 >seq7348 Length=9517 Score = 120 bits (132), Expect = 6e-22 Identities = 166/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || | ||||| || || || || ||||| || || || || | Sbjct 453 TACCACCACGGAGACGGAGGGCCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCTG 394 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 || | | ||| || || || || |||||||| ||||| || | || ||||| |||| Sbjct 393 CTAAGGTGCGACCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCCGGAG 334 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCT 82760 | || |||||||| || || ||||| || ||||| || ||||| || ||| || | || Sbjct 333 GGATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTGTCAATGGTGTCAG-AGCTCTCC 275 Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || | || || ||||| || ||||| ||||| || ||||||||||| Sbjct 274 ACCTCAAGTGTGATGGTCTTACCAGTCAAGGTCTTCACGAATATCTGCAT 225 >seq4867 Length=12713 Score = 118 bits (130), Expect = 2e-21 Identities = 100/123 (81%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 82598 CAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTC 82657 |||||| ||||| ||||| || |||||||| || || || ||||| || ||| ||| || Sbjct 7594 CAGAACCAAGTGAAGAGTGGACTCTTTCTGAATGTTGTAGTCAGAAAGCGTTCGACCATC 7653 Query 82658 TTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATC 82717 ||||||||||| ||||||||||| ||||| ||||||||||| ||||| || || || || Sbjct 7654 CTCTAGTTGTTTCCCAGCAAAGATGAGTCTCTGTTGATCTGGTGGTATCCCCTCTTTGTC 7713 Query 82718 TTG 82720 || Sbjct 7714 CTG 7716 >seq3737 Length=14779 Score = 109 bits (120), Expect = 1e-18 Identities = 138/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 82621 CTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGA 82680 |||| || || || ||||||| ||| | || || ||||| || || || || || |||| Sbjct 9320 CTTTGTGGATGTTGTAATCAGCAAGAGTCCTGCCATCTTCGAGCTGCTTACCGGCGAAGA 9379 Query 82681 TTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTT 82740 | | || || ||||| ||||| || ||||||||||| || ||||| ||| | || || | Sbjct 9380 TCAACCTCTGCTGATCGGGAGGGATACCTTCCTTATCGTGGATCTTGGCTGTAACGTTGT 9439 Query 82741 CAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAA 82800 | ||||| || ||| || || | || |||||||| || || | ||||| || | Sbjct 9440 CGATCGTGTCGGAGCTTTCAACCTCGAGGGTGATCGTCTTTCCGGTAAGAGTCTTAACGA 9499 Query 82801 ATATCTGCAT 82810 |||||||||| Sbjct 9500 ATATCTGCAT 9509 >seq10768 Length=6938 Score = 102 bits (112), Expect = 2e-16 Identities = 94/119 (79%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 82602 ACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCT 82661 || ||||| ||||| || |||||||| || || || |||| || ||| || || ||| Sbjct 3331 ACCAAGTGAAGAGTGGACTCTTTCTGGATGTTGTAGTCAGCGAGCGTTCGGCCATCCTCT 3390 Query 82662 AGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTG 82720 || ||||| |||||||||||||| || ||||||||||| ||||| || || ||||| || Sbjct 3391 AGCTGTTTCCCAGCAAAGATTAGCCTCTGTTGATCTGGTGGTATCCCCTCTTTATCCTG 3449 >seq2054 Length=20018 Score = 95.1 bits (104), Expect = 2e-14 Identities = 135/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 82621 CTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGA 82680 ||||||| || || || |||| | | | | || ||||| || ||||| || || |||| Sbjct 3204 CTTTCTGGATGTTGTAGTCAGCCAAAGTACGGCCATCTTCGAGCTGTTTACCGGCGAAGA 3263 Query 82681 TTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTT 82740 | | ||| || ||||||||||| || ||||| || ||||| ||||| || || ||||| | Sbjct 3264 TCAATCTCTGCTGATCTGGAGGGATACCTTCTTTGTCTTGGATCTTGGCCTTGACATTGT 3323 Query 82741 CAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAA 82800 | || || || | || || || | || || ||||| || || | || || || | Sbjct 3324 CGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTTCCGGTTAGGGTTTTCACGA 3383 Query 82801 ATATCTGCAT 82810 | |||||||| Sbjct 3384 AGATCTGCAT 3393 >seq806 Length=29032 Score = 84.2 bits (92), Expect = 4e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || | || || || || || ||||| || || || || | || | | || Sbjct 17961 ACGGAGGACGAGATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGTGTGCGGCC 18020 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 |||||| || || || || || ||||| |||| || || || || || || |||||||| Sbjct 18021 GTCTTCGAGCTGCTTCCCGGCGAAGATCAGTCGCTGCTGGTCCGGCGGGATCCCTTCCTT 18080 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 || || ||||| || || || || || || || || | || || || | ||||| Sbjct 18081 GTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTTAT 18140 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||| || || | || || || || |||||||| Sbjct 18141 CGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 18176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981012893384148