Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Raphanus_20raphanistrum_20subsp._20raphanistrum_20[genbank_20GCA_5F0
00769845.1_202014-10-28] 64,732 sequences; 253,833,977 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq7912 147 2e-30
seq3667 145 8e-30
seq1703 140 3e-28
seq1045 136 4e-27
seq37186 129 6e-25
seq25552 129 6e-25
seq806 127 2e-24
seq11485 125 7e-24
seq12662 122 9e-23
seq2054 122 9e-23
seq24793 120 3e-22
seq964 118 1e-21
seq6096 113 5e-20
seq4396 109 6e-19
seq23940 107 2e-18
seq7348 102 8e-17
seq20570 100 3e-16
seq3737 91.5 1e-13
>seq7912
Length=9007
Score = 147 bits (162), Expect = 2e-30
Identities = 160/210 (76%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTC 134563
||||| || ||||| || |||||||| ||||||||||| ||||| | | || ||| ||
Sbjct 6582 ACGAGATGAAGCGTAGACTCCTTTTGGATGTTGTAGTCTGCCAATGTTCTGCC-GTCTTC 6640
Query 134564 GAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTG 134623
|||||| ||||| || || || | | |||||||||||| || || ||||| || || ||
Sbjct 6641 GAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGATCGGGAGGGATACCTTCCTTGTCCTG 6700
Query 134624 AATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTT 134683
||| || |||||| ||| | ||||||||| |||||| ||||| || ||||| ||
Sbjct 6701 AATCTTGGCTTTGACGTTGTCGATTGTGTCGGAGCTTTCCACCTCGAGGGTGATGGTCTT 6760
Query 134684 ACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || | ||| |||||||| || |||||
Sbjct 6761 TCCCGTGAGAGTCTTAACGAAGATCTGCAT 6790
Score = 122 bits (134), Expect = 9e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
||||| | || |||||||| | ||| || ||||| |||||||| |||||||||||| |
Sbjct 6336 CCTCCACGCAGACGCAACACCAAGTGAAGTGTGGACTCCTTTTGGATGTTGTAGTCGGCT 6395
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| || || || |||||||| || || || || | | |||||| || || ||
Sbjct 6396 AAGGTGCGACCATCCTCAAGCTGTTTCCCAGCGAAGATGAGCCTCTGCTGGTCCGGAGGG 6455
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| || || || ||||| || || ||||| ||| | |||||||| || ||
Sbjct 6456 ATACCCTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCAACC 6515
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| | ||||||||| || || || ||||| || || || || |||||
Sbjct 6516 TCCAAAGTAATGGTCTTTCCAGTCAAAGTCTTGACAAAGATCTGCAT 6562
>seq3667
Length=14967
Score = 145 bits (160), Expect = 8e-30
Identities = 170/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | |||||||| || || || ||||| || |||||||||||| |
Sbjct 5495 CCACCGCGGAGACGGAGGACGAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCG 5554
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | ||| ||||||||||| || || || |||| |||||||| || || ||
Sbjct 5555 AGGGTGCGCCCGTCCTCGAGCTGTTTCCCGGCGAAGATCAGCCGCTGCTGGTCCGGAGGG 5614
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|||||||| || || || || || |||||| ||| | |||||||| ||||| ||
Sbjct 5615 ATGCCTTCCTTGTCCTGGATCTTGGCTTTGACATTGTCGATGGTGTCGGAAGATTCGACC 5674
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716
||||| || || || || || |||| ||||| ||||| || ||||| ||
Sbjct 5675 TCGAGGGTGATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 5724
>seq1703
Length=21771
Score = 140 bits (154), Expect = 3e-28
Identities = 177/241 (73%), Gaps = 3/241 (1%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
||||| | || ||||| || | ||| ||||| || ||||| || || ||||| ||| |
Sbjct 18824 CCTCCACGTAGACGCAAGACCAAGTGAAGCGTAGACTCCTTCTGGATATTGTAATCGGCC 18883
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| || || |||||||| || || || || || | |||||||||||| || ||
Sbjct 18884 AAGGTGCGACCATCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGAGGG 18943
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| ||||| || || || || || ||| || ||| | |||||||| ||||||
Sbjct 18944 ATCCCTTCCTTGTCCTGGATCTTGGCTTTCACGTTGTCGATGGTGTCGGAGCTTTCCACC 19003
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT-TTTGTT--TTTG 134723
||||| || || || || ||||| | |||||| ||||| |||||||| |||||| ||||
Sbjct 19004 TCGAGGGTGATTGTCTTCCCGGTGAGAGTTTTCACGAAGATTTGCATCTTTGTTGGTTTG 19063
Query 134724 T 134724
|
Sbjct 19064 T 19064
Score = 116 bits (128), Expect = 4e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| || | ||| || ||||| | ||| || || || || || ||||||||||| || |||
Sbjct 18140 CCACCACGGAGACGTAACACCAAGTGAAGGGTCGACTCTTTCTGAATGTTGTAATCAGCC 18199
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| |||| || || |||||||| || || || || |||| | |||||| || || ||
Sbjct 18200 AA-GGTGCGACCATCCTCGAGCTGCTTCCCAGCGAATATCAGCCTCTGCTGGTCCGGAGG 18258
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| || ||||| ||||| ||||| ||| || ||| | |||||||| |||||
Sbjct 18259 GATACCCTCTTTGTCTTGGATTTTCGCTTTCACGTTGTCAATGGTGTCGGAACTCTCCAC 18318
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| | ||| || || || || || || || |||||||| || |||||
Sbjct 18319 CTCTAAAGTGATCGTCTTTCCTGTCAACGTCTTAACGAAGATCTGCAT 18366
Score = 98.7 bits (108), Expect = 1e-15
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
||||| | || ||||| || | ||| ||||| ||||| || || ||||||||||| ||
Sbjct 18368 CCTCCACGTAGACGCAAGACCAAGTGAAGCGTAGATTCTTTCTGGATGTTGTAGTCAGCA 18427
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| || || || | ||| || || ||||| ||||| | |||||| || || ||
Sbjct 18428 AGAGTCCTCCCATCCTCCAACTGCTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGTGGG 18487
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| ||||| || || ||||| || ||||| ||| | || ||||| |||||
Sbjct 18488 ATCCCTTCCTTATCCTGAATCTTAGCCTTGACATTGTCAATAGTATCGGAGCTCTCCACC 18547
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| | |||||| || || || || ||||| || || || || |||||
Sbjct 18548 TCCAAAGTAATAGTCTTTCCAGTCAAAGTCTTGACAAAGATCTGCAT 18594
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| || | ||| || | || | ||| || || || ||||| || || |||||||| |||
Sbjct 17912 CCACCACGGAGACGGAGGACCAAGTGAAGAGTCGACTCCTTCTGGATATTGTAGTCTGCC 17971
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| |||| || || |||||||| || || || || || | |||||||||||| || ||
Sbjct 17972 AA-GGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCCGGAGG 18030
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| ||||| || || || || || || || ||| | ||||| || || ||
Sbjct 18031 GATACCTTCCTTGTCCTGGATCTTAGCCTTCACGTTGTCAATAGTGTCAGAGCTCTCAAC 18090
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| | || || || || ||||| | ||| || || || || |||||
Sbjct 18091 CTCCAATGTGATAGTCTTCCCGGTAAGAGTCTTGACAAAGATCTGCAT 18138
>seq1045
Length=26565
Score = 136 bits (150), Expect = 4e-27
Identities = 168/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | |||||||| || || || ||||| || |||||||||||| |
Sbjct 2792 CCACCGCGGAGACGGAGGACGAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCG 2851
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | ||| ||||||||||| || || || |||| |||||||| || || ||
Sbjct 2852 AGGGTGCGCCCGTCCTCGAGCTGTTTCCCGGCGAAGATCAGCCGCTGCTGGTCCGGAGGG 2911
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|||||||| || || || || || ||||| ||| | |||||||| || || ||
Sbjct 2912 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGACTCGACC 2971
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716
||||| || || || || || |||| ||||| ||||| || ||||| ||
Sbjct 2972 TCGAGGGTGATTGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 3021
>seq37186
Length=985
Score = 129 bits (142), Expect = 6e-25
Identities = 156/210 (74%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTC 134563
||||| || || || || ||||| || ||||||||||| ||||| | | || ||| ||
Sbjct 1 ACGAGATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCCGCCAATGTTCTGCC-GTCTTC 59
Query 134564 GAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTG 134623
||||| ||||| || || ||||| | |||||| || || || || || || || |||||
Sbjct 60 AAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATACCCTCCTTGTCTTG 119
Query 134624 AATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTT 134683
|| || |||||| ||| | |||||||| ||||| || | ||||||||| ||
Sbjct 120 GATCTTAGCTTTGACATTGTCAATGGTGTCGGAGCTCTCCACCTCCAAAGTAATGGTCTT 179
Query 134684 ACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || || ||||||||||| |||||
Sbjct 180 GCCGGTCAATGTCTTAACGAAAATCTGCAT 209
Score = 111 bits (122), Expect = 2e-19
Identities = 145/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 134517 GTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCC 134575
|| || || ||||| ||||||||||| ||||| | | || ||| || | |||||| ||
Sbjct 470 GTCGACTCTTTTTGGATGTTGTAGTCAGCCAATGTTCTGCC-GTCCTCCAACTGTTTCCC 528
Query 134576 TGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTT 134635
|| || || | | |||||||||||| || || || ||||| || ||||| || |||
Sbjct 529 GGCGAAGATAAGCCTCTGCTGATCGGGAGGGATACCCTCTTTGTCCTGAATCTTGGCTTT 588
Query 134636 GACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGT 134695
|| ||| | |||||||| |||||| ||||| || || || || || || | |||
Sbjct 589 AACGTTGTCGATGGTGTCGGAGCTTTCCACCTCGAGGGTGATCGTCTTCCCAGTGAGAGT 648
Query 134696 TTTAACGAAAATTTGCAT 134713
|||||||| ||||||||
Sbjct 649 CTTAACGAAGATTTGCAT 666
Score = 98.7 bits (108), Expect = 1e-15
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
||||| || | || || |||||||| ||||||||||| | | || | | |||
Sbjct 229 ACGAGATGCAAAGTTGACTCCTTTTGGATGTTGTAGTCAGCGAGAGTCCTGCCGACCTCG 288
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
||||| ||||| ||||| ||||| | |||||| || || || || || || || || |||
Sbjct 289 AGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGA 348
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684
|| || ||||| || | ||||| || ||||| |||||||| ||||| ||
Sbjct 349 ATCTTAGCCTTGACATTATCGATGGTGTCCGAGCTCTCCACCTCGAGAGTGATGGTCTTT 408
Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| | || || ||||| || |||||
Sbjct 409 CCGGTAAGGGTCTTGACGAAGATCTGCAT 437
>seq25552
Length=2169
Score = 129 bits (142), Expect = 6e-25
Identities = 148/195 (76%), Gaps = 3/195 (2%)
Strand=Plus/Minus
Query 134521 ATTCCTTT-TGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGC 134578
|| ||||| || ||||||||||| ||||| | | | || ||||||||||| || ||
Sbjct 438 ATACCTTTCTGGATGTTGTAGTCAGCCAAAGTACGGCCA-TCTTCGAGCTGTTTACCGGC 380
Query 134579 AAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGAC 134638
|| |||| |||||||||||| || || || |||||||| ||||| || || ||||||
Sbjct 379 GAAGATCAGACGCTGCTGATCCGGAGGGATACCTTCTTTGTCTTGGATCTTGGCTTTGAC 320
Query 134639 CGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTT 134698
||| | |||||||| || || || |||||||| ||||| || || |||| |||||
Sbjct 319 ATTGTCGATGGTGTCGGAGGACTCGACTTCGAGAGTGATGGTCTTGCCCGTTAGGGTTTT 260
Query 134699 AACGAAAATTTGCAT 134713
||||| || |||||
Sbjct 259 CACGAAGATCTGCAT 245
>seq806
Length=29032
Score = 127 bits (140), Expect = 2e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | ||||| || ||||| || ||||| || |||||||||||| |
Sbjct 17950 CCACCACGGAGACGGAGGACGAGATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 18009
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | ||| |||||||| || || || || |||| |||||||| || |||||
Sbjct 18010 AGTGTGCGGCCGTCTTCGAGCTGCTTCCCGGCGAAGATCAGTCGCTGCTGGTCCGGCGGG 18069
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| ||||| || || || || || ||||| ||| | |||||||| || || ||
Sbjct 18070 ATCCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGACTCGACC 18129
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716
||||| || || || || || |||| ||||| ||||| || ||||| ||
Sbjct 18130 TCGAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 18179
>seq11485
Length=6519
Score = 125 bits (138), Expect = 7e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | ||||| || || || || ||||| || |||||||| ||| |
Sbjct 4704 CCACCACGGAGACGAAGTACGAGATGGAGAGTTGACTCCTTCTGGATGTTGTAATCGGCC 4645
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | ||| || ||||| || || || || || | | |||||| ||||| ||
Sbjct 4644 AGGGTGCGTCCGTCTTCTAGCTGCTTCCCAGCGAAGATGAGCCTCTGCTGGTCGGGAGGG 4585
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|||||||| || || || || ||| ||||| ||| | |||||||| || ||
Sbjct 4584 ATGCCTTCCTTGTCCTGGATCTTTGCCTTGACATTGTCTATAGTGTCGGAGCTCTCGACC 4525
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|||||||| ||||| || ||||| | ||||| ||||||||||||||
Sbjct 4524 TCGAGAGTGATGGTCTTGCCGGTGAGTGTTTTCACGAAAATTTGCAT 4478
Score = 111 bits (122), Expect = 2e-19
Identities = 149/205 (73%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTCGAGCT 134568
||| || || || ||||| || |||||||| || ||||| | | || || |||||||
Sbjct 5137 GTGAAGAGTAGACTCCTTCTGGATGTTGTAATCAGCCAAAG-TCCGACCATCCTCGAGCT 5079
Query 134569 GTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTT 134628
|||| || || || || | | |||||| || || || |||||||| || || ||||| |
Sbjct 5078 GTTTCCCAGCGAAGATGAGTCTCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGAATCT 5019
Query 134629 TTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGG 134688
| ||| || ||| | ||||| || ||||| || || ||||||||||||||||
Sbjct 5018 TCGCTTTCACATTGTCGATCGTGTCAGAGCTCTCCACTTCAAGGGTAATGGTTTTACCGG 4959
Query 134689 TTAAAGTTTTAACGAAAATTTGCAT 134713
| | || || |||||||| |||||
Sbjct 4958 TGAGTGTCTTGACGAAAATCTGCAT 4934
>seq12662
Length=5898
Score = 122 bits (134), Expect = 9e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| |||||||| | ||| | || || ||||| || |||||||||||| ||
Sbjct 3943 CCACCACGGAGACGCAACACCAAGTGAATGGTTGACTCCTTCTGGATGTTGTAGTCGGCA 3884
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| || || || ||||| || || || || || | ||||||||| || || ||
Sbjct 3883 AGGGTGCGACCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGG 3824
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|||||||| || ||||| || || ||| || || | ||||| || || ||
Sbjct 3823 ATGCCTTCCTTATCTTGGATCTTGGCTTTCACGTTATCAATCGTGTCCGAGCTCTCAACT 3764
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || ||||| ||||| || || || || ||||| || |||||
Sbjct 3763 TCGAGGGTGATGGTCTTACCAGTCAAGGTCTTCACGAAGATCTGCAT 3717
Score = 114 bits (126), Expect = 1e-20
Identities = 153/210 (73%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTC 134563
||||| || || || || ||||| || ||||||||||| || | | | || ||| ||
Sbjct 3697 ACGAGATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCAGCGAGAGTTCTG-CCGTCTTC 3639
Query 134564 GAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTG 134623
||||| |||||||| || ||||| | |||||| || || || || || || || |||||
Sbjct 3638 AAGCTGCTTGCCTGCGAAGATCAACCTCTGCTGGTCCGGTGGGATCCCCTCCTTGTCTTG 3579
Query 134624 AATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTT 134683
|| ||| |||||| ||| | |||||||| ||||| || || ||||| || ||
Sbjct 3578 GATCTTTGCTTTGACGTTGTCGATGGTGTCGGAGCTCTCCACCTCTAGGGTAATCGTCTT 3519
Query 134684 ACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || || |||||||| || |||||
Sbjct 3518 TCCCGTCAAGGTCTTAACGAAGATCTGCAT 3489
>seq2054
Length=20018
Score = 122 bits (134), Expect = 9e-23
Identities = 153/205 (75%), Gaps = 4/205 (2%)
Strand=Plus/Plus
Query 134524 CCTTT-TGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAA 134581
||||| || ||||||||||| ||||| | | | || ||||||||||| || || ||
Sbjct 3203 CCTTTCTGGATGTTGTAGTCAGCCAAAGTACGGCCA-TCTTCGAGCTGTTTACCGGCGAA 3261
Query 134582 AATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGC 134641
||||| | ||||||||| || || || |||||||| ||||| || || |||||
Sbjct 3262 GATCAATCTCTGCTGATCTGGAGGGATACCTTCTTTGTCTTGGATCTTGGCCTTGACATT 3321
Query 134642 GTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAAC 134701
||| | |||||||| || || || ||||| || ||||| || ||||||| ||||| ||
Sbjct 3322 GTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTTCCGGTTAGGGTTTTCAC 3381
Query 134702 GAAAATTTGCAT-TTTGTTTTTGTT 134725
||| || ||||| |||| || |||
Sbjct 3382 GAAGATCTGCATCTTTGAGTTAGTT 3406
>seq24793
Length=2311
Score = 120 bits (132), Expect = 3e-22
Identities = 154/210 (73%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGT-CGCCAACGGTGTGAGAGTCGTC 134563
||||| || || || || ||||| || |||||||||| |||||| | | || ||| ||
Sbjct 1405 ACGAGATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCCGCCAATGTTCTG-CCGTCTTC 1463
Query 134564 GAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTG 134623
||||| ||||| || || ||||| | |||||| || || || || || || || |||||
Sbjct 1464 AAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATACCCTCCTTGTCTTG 1523
Query 134624 AATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTT 134683
|| ||| |||||| ||| | |||||||| ||||| || || ||||| || ||
Sbjct 1524 GATCTTTGCTTTGACGTTGTCGATGGTGTCGGAGCTCTCCACCTCTAGGGTAATCGTCTT 1583
Query 134684 ACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || || |||||||| || |||||
Sbjct 1584 TCCCGTCAAGGTCTTAACGAAGATCTGCAT 1613
>seq964
Length=27231
Score = 118 bits (130), Expect = 1e-21
Identities = 157/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| ||||| || ||||| ||||| || ||||| || ||||||||||| | | ||| ||
Sbjct 9938 AGACGCAAGACAAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCAGCGAGCGTGCGA 9879
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| || ||||| || || |||||||| | | ||||||||| || || ||||| ||
Sbjct 9878 CCATCCTCCAGCTGCTTACCAGCAAAAATAAGCCTCTGCTGATCCGGAGGGATGCCCTCC 9819
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || || || || ||||| ||| | |||||||| || || || |||||
Sbjct 9818 TTGTCCTGGATCTTCGCCTTGACATTGTCAATAGTGTCGGAGCTCTCAACCTCCAGAGTG 9759
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || || || ||||| || ||||| || |||||
Sbjct 9758 ATGGTCTTTCCCGTCAAAGTCTTGACGAAGATCTGCAT 9721
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| ||||||||||| | ||| || || ||||| || || || |||||||||||||| |
Sbjct 10175 CCACCTCTGAGTCGAAGCACAAGATGCAGCGTAGACTCTTTCTGAATGTTGTAGTCAGCT 10116
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | || || ||||| || || ||||| || | | |||||| || || ||
Sbjct 10115 AGCGTGCGTCCATCCTCCAGCTGCTTACCGGCAAAGATGAGCCTCTGCTGGTCCGGTGGG 10056
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| || ||||| || || || || ||||| ||| | ||||| || || ||
Sbjct 10055 ATACCCTCTTTATCCTGGATCTTAGCCTTGACGTTGTCAATGGTGTCTGAGCTCTCAACC 9996
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| | ||| |||||||||||||| | || || || || ||||||||
Sbjct 9995 TCCAAAGTGATGGTTTTACCGGTGAGGGTCTTGACAAAGATTTGCAT 9949
Score = 102 bits (112), Expect = 8e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
||||| || || || || ||||| || || ||||| ||| | | ||| | || |||
Sbjct 9701 ACGAGATGGAGAGTCGACTCCTTCTGGATATTGTAATCGGCCAAGGTACGTCCATCCTCG 9642
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
|||||||| || || || || | | |||||| || || || || ||||| || || ||
Sbjct 9641 AGCTGTTTACCGGCGAAGATGAGCCTCTGCTGGTCCGGAGGAATACCTTCCTTGTCCTGG 9582
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684
|| || ||||| || | || ||||| || || |||||||| ||||| ||
Sbjct 9581 ATCTTAGCCTTGACGTTATCGATGGTATCGGAGCTCTCGACTTCGAGAGTGATGGTCTTG 9522
Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| | |||||| ||||||||||||||
Sbjct 9521 CCGGTGAGAGTTTTCACGAAAATTTGCAT 9493
>seq6096
Length=10951
Score = 113 bits (124), Expect = 5e-20
Identities = 131/177 (74%), Gaps = 0/177 (0%)
Strand=Plus/Plus
Query 134486 TCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCC 134545
||||||||| || || | || ||||| ||||| || ||||| || |||||||||||| |
Sbjct 10774 TCCTCCTCTCAGACGGAGAACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 10833
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
| |||| | ||| |||||||| || || || ||||| | |||||||| || || ||
Sbjct 10834 GAGGGTGCGTCCGTCCTCGAGCTGCTTTCCGGCGAAAATGAGGCGCTGCTGGTCCGGAGG 10893
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTC 134662
|||||||| || ||||| || || ||||| ||| | |||||||| || ||
Sbjct 10894 GATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGACTC 10950
>seq4396
Length=13502
Score = 109 bits (120), Expect = 6e-19
Identities = 157/219 (72%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554
|| || ||||| | ||| || || || || || ||||||||||| || ||||| |||| |
Sbjct 12708 AGACGTAACACCAAGTGAAGGGTTGACTCTTTCTGAATGTTGTAATCAGCCAA-GGTGCG 12650
Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614
| || || ||||| ||||| || || || | ||||||||| || || || || || ||
Sbjct 12649 ACCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGGATCCCCTC 12590
Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674
|| || ||||| || ||||| ||| | |||||||| ||||| || | |||
Sbjct 12589 CTTGTCCTGAATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCCACCTCCAAAGT 12530
Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || ||||| | || ||||| ||||| |||||
Sbjct 12529 GATAGTCTTCCCGGTCAGTGTCTTAACAAAAATCTGCAT 12491
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
|| || || || || || || ||||| ||||||||||| | | || | || ||
Sbjct 12039 ACAAGATGAAGGGTCGACTCTTTTTGGATGTTGTAGTCAGCGAGAGTACGCCCATCTTCA 11980
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
|| || || || || || || | | ||||||||| || || |||||||| || || |||
Sbjct 11979 AGTTGCTTCCCGGCGAAGATAAGCCTCTGCTGATCCGGGGGAATGCCTTCCTTGTCCTGA 11920
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684
|| || ||| || ||| | ||||| || |||||| ||||| || || || ||
Sbjct 11919 ATCTTGGCTTTAACGTTGTCGATGGTGTCTGAGCTTTCCACCTCGAGGGTGATCGTCTTT 11860
Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716
||||| | ||| |||||||| || ||||| ||
Sbjct 11859 CCGGTGAGAGTCTTAACGAATATCTGCATCTT 11828
>seq23940
Length=2465
Score = 107 bits (118), Expect = 2e-18
Identities = 110/144 (76%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 134486 TCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCC 134545
||||||||| || || | || ||||| ||||| || ||||| || |||||||||||| |
Sbjct 2300 TCCTCCTCTCAGACGGAGAACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 2359
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
| |||| | ||| |||||||| || || || ||||| | |||||||| || || ||
Sbjct 2360 GAGGGTGCGTCCGTCCTCGAGCTGCTTTCCGGCGAAAATGAGGCGCTGCTGGTCCGGAGG 2419
Query 134606 TATGCCTTCTTTTTCTTGAATTTT 134629
|||||||| || ||||| || ||
Sbjct 2420 GATGCCTTCCTTGTCTTGGATCTT 2443
>seq7348
Length=9517
Score = 102 bits (112), Expect = 8e-17
Identities = 145/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569
||| || || || ||||| || ||||||||||| | | |||| || || || |||||
Sbjct 428 GTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCTGCTAAGGTGCGACCATCCTCAAGCTG 369
Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629
|| || || || || | |||||||||||| || || |||||||| || || || || ||
Sbjct 368 CTTTCCAGCGAAGATGAGACGCTGCTGATCCGGAGGGATGCCTTCCTTGTCCTGGATCTT 309
Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689
|| || ||| | ||||| || ||||| || || || ||||| ||||| ||
Sbjct 308 GGCCTTTACGTTGTCAATGGTGTCAGAGCTCTCCACCTCAAGTGTGATGGTCTTACCAGT 249
Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713
|| || || ||||| || |||||
Sbjct 248 CAAGGTCTTCACGAATATCTGCAT 225
Score = 93.3 bits (102), Expect = 4e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 134504 CACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTC 134563
||| | ||| || || || ||||| || |||||||||||| ||| ||| || || ||
Sbjct 206 CACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCAAGAGTGCGACCATCCTC 147
Query 134564 GAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTG 134623
|||||| || || || || || | ||||||||| || || || || ||||| || || ||
Sbjct 146 GAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTGTCCTG 87
Query 134624 AATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTT 134683
|| || || || ||| | |||||||| || || || | || ||||| ||
Sbjct 86 GATCTTAGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCAACTTCCAATGTGATGGTCTT 27
Query 134684 ACCGGTTAAAGTTTTAACGAAAAT 134707
||||| | ||| || ||||| ||
Sbjct 26 GCCGGTAAGAGTCTTCACGAAGAT 3
>seq20570
Length=3172
Score = 100 bits (110), Expect = 3e-16
Identities = 155/219 (71%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554
|| |||||||| | ||| || || || ||||| || ||||||||||| ||||| |||
Sbjct 301 AGACGCAACACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCCAA-GGTTCT 359
Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614
||| || | ||| || ||||| || || | | ||||||||| || || || |||||
Sbjct 360 CCCGTCCTCCAACTGCTTTCCTGCGAAGATAAGCCTCTGCTGATCCGGAGGAATCCCTTC 419
Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674
|| || || || || || || ||| | ||||| || |||||| ||||| ||
Sbjct 420 CTTGTCCTGGATCTTGGCCTTAACGTTGTCGATGGTGTCAGAGCTTTCCACCTCGAGGGT 479
Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || || || | |||||| ||||| || |||||
Sbjct 480 GATTGTCTTTCCTGTGAGAGTTTTCACGAAGATCTGCAT 518
>seq3737
Length=14779
Score = 91.5 bits (100), Expect = 1e-13
Identities = 113/155 (73%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 134559 TCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTT 134618
|| |||||||| || || || || ||||| | |||||||||||| || || ||||| ||
Sbjct 9355 TCTTCGAGCTGCTTACCGGCGAAGATCAACCTCTGCTGATCGGGAGGGATACCTTCCTTA 9414
Query 134619 TCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATG 134678
|| || || || | | || ||| | |||||||| ||| || ||||| || ||
Sbjct 9415 TCGTGGATCTTGGCTGTAACGTTGTCGATCGTGTCGGAGCTTTCAACCTCGAGGGTGATC 9474
Query 134679 GTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || ||||| | ||| |||||||| || |||||
Sbjct 9475 GTCTTTCCGGTAAGAGTCTTAACGAATATCTGCAT 9509
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 504989456884640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |