Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raphanus_20raphanistrum_20subsp._20raphanistrum_20[genbank_20GCA_5F0 00769845.1_202014-10-28] 64,732 sequences; 253,833,977 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq7912 147 2e-30 seq3667 145 8e-30 seq1703 140 3e-28 seq1045 136 4e-27 seq37186 129 6e-25 seq25552 129 6e-25 seq806 127 2e-24 seq11485 125 7e-24 seq12662 122 9e-23 seq2054 122 9e-23 seq24793 120 3e-22 seq964 118 1e-21 seq6096 113 5e-20 seq4396 109 6e-19 seq23940 107 2e-18 seq7348 102 8e-17 seq20570 100 3e-16 seq3737 91.5 1e-13 >seq7912 Length=9007 Score = 147 bits (162), Expect = 2e-30 Identities = 160/210 (76%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTC 134563 ||||| || ||||| || |||||||| ||||||||||| ||||| | | || ||| || Sbjct 6582 ACGAGATGAAGCGTAGACTCCTTTTGGATGTTGTAGTCTGCCAATGTTCTGCC-GTCTTC 6640 Query 134564 GAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTG 134623 |||||| ||||| || || || | | |||||||||||| || || ||||| || || || Sbjct 6641 GAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGATCGGGAGGGATACCTTCCTTGTCCTG 6700 Query 134624 AATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTT 134683 ||| || |||||| ||| | ||||||||| |||||| ||||| || ||||| || Sbjct 6701 AATCTTGGCTTTGACGTTGTCGATTGTGTCGGAGCTTTCCACCTCGAGGGTGATGGTCTT 6760 Query 134684 ACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | ||| |||||||| || ||||| Sbjct 6761 TCCCGTGAGAGTCTTAACGAAGATCTGCAT 6790 Score = 122 bits (134), Expect = 9e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | || |||||||| | ||| || ||||| |||||||| |||||||||||| | Sbjct 6336 CCTCCACGCAGACGCAACACCAAGTGAAGTGTGGACTCCTTTTGGATGTTGTAGTCGGCT 6395 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| || || || |||||||| || || || || | | |||||| || || || Sbjct 6396 AAGGTGCGACCATCCTCAAGCTGTTTCCCAGCGAAGATGAGCCTCTGCTGGTCCGGAGGG 6455 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || ||||| || || ||||| ||| | |||||||| || || Sbjct 6456 ATACCCTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCAACC 6515 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | ||||||||| || || || ||||| || || || || ||||| Sbjct 6516 TCCAAAGTAATGGTCTTTCCAGTCAAAGTCTTGACAAAGATCTGCAT 6562 >seq3667 Length=14967 Score = 145 bits (160), Expect = 8e-30 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | |||||||| || || || ||||| || |||||||||||| | Sbjct 5495 CCACCGCGGAGACGGAGGACGAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCG 5554 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | ||| ||||||||||| || || || |||| |||||||| || || || Sbjct 5555 AGGGTGCGCCCGTCCTCGAGCTGTTTCCCGGCGAAGATCAGCCGCTGCTGGTCCGGAGGG 5614 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || || || || || |||||| ||| | |||||||| ||||| || Sbjct 5615 ATGCCTTCCTTGTCCTGGATCTTGGCTTTGACATTGTCGATGGTGTCGGAAGATTCGACC 5674 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 ||||| || || || || || |||| ||||| ||||| || ||||| || Sbjct 5675 TCGAGGGTGATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 5724 >seq1703 Length=21771 Score = 140 bits (154), Expect = 3e-28 Identities = 177/241 (73%), Gaps = 3/241 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | || ||||| || | ||| ||||| || ||||| || || ||||| ||| | Sbjct 18824 CCTCCACGTAGACGCAAGACCAAGTGAAGCGTAGACTCCTTCTGGATATTGTAATCGGCC 18883 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| || || |||||||| || || || || || | |||||||||||| || || Sbjct 18884 AAGGTGCGACCATCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGAGGG 18943 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || || || || || ||| || ||| | |||||||| |||||| Sbjct 18944 ATCCCTTCCTTGTCCTGGATCTTGGCTTTCACGTTGTCGATGGTGTCGGAGCTTTCCACC 19003 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT-TTTGTT--TTTG 134723 ||||| || || || || ||||| | |||||| ||||| |||||||| |||||| |||| Sbjct 19004 TCGAGGGTGATTGTCTTCCCGGTGAGAGTTTTCACGAAGATTTGCATCTTTGTTGGTTTG 19063 Query 134724 T 134724 | Sbjct 19064 T 19064 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || || | ||| || ||||| | ||| || || || || || ||||||||||| || ||| Sbjct 18140 CCACCACGGAGACGTAACACCAAGTGAAGGGTCGACTCTTTCTGAATGTTGTAATCAGCC 18199 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || |||| || || |||||||| || || || || |||| | |||||| || || || Sbjct 18200 AA-GGTGCGACCATCCTCGAGCTGCTTCCCAGCGAATATCAGCCTCTGCTGGTCCGGAGG 18258 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || || ||||| ||||| ||||| ||| || ||| | |||||||| ||||| Sbjct 18259 GATACCCTCTTTGTCTTGGATTTTCGCTTTCACGTTGTCAATGGTGTCGGAACTCTCCAC 18318 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | ||| || || || || || || || |||||||| || ||||| Sbjct 18319 CTCTAAAGTGATCGTCTTTCCTGTCAACGTCTTAACGAAGATCTGCAT 18366 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | || ||||| || | ||| ||||| ||||| || || ||||||||||| || Sbjct 18368 CCTCCACGTAGACGCAAGACCAAGTGAAGCGTAGATTCTTTCTGGATGTTGTAGTCAGCA 18427 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || || || | ||| || || ||||| ||||| | |||||| || || || Sbjct 18428 AGAGTCCTCCCATCCTCCAACTGCTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGTGGG 18487 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || || ||||| || ||||| ||| | || ||||| ||||| Sbjct 18488 ATCCCTTCCTTATCCTGAATCTTAGCCTTGACATTGTCAATAGTATCGGAGCTCTCCACC 18547 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | |||||| || || || || ||||| || || || || ||||| Sbjct 18548 TCCAAAGTAATAGTCTTTCCAGTCAAAGTCTTGACAAAGATCTGCAT 18594 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || || | ||| || | || | ||| || || || ||||| || || |||||||| ||| Sbjct 17912 CCACCACGGAGACGGAGGACCAAGTGAAGAGTCGACTCCTTCTGGATATTGTAGTCTGCC 17971 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || |||| || || |||||||| || || || || || | |||||||||||| || || Sbjct 17972 AA-GGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCCGGAGG 18030 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || ||||| || || || || || || || ||| | ||||| || || || Sbjct 18031 GATACCTTCCTTGTCCTGGATCTTAGCCTTCACGTTGTCAATAGTGTCAGAGCTCTCAAC 18090 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || || || || ||||| | ||| || || || || ||||| Sbjct 18091 CTCCAATGTGATAGTCTTCCCGGTAAGAGTCTTGACAAAGATCTGCAT 18138 >seq1045 Length=26565 Score = 136 bits (150), Expect = 4e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | |||||||| || || || ||||| || |||||||||||| | Sbjct 2792 CCACCGCGGAGACGGAGGACGAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCG 2851 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | ||| ||||||||||| || || || |||| |||||||| || || || Sbjct 2852 AGGGTGCGCCCGTCCTCGAGCTGTTTCCCGGCGAAGATCAGCCGCTGCTGGTCCGGAGGG 2911 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || || || || || ||||| ||| | |||||||| || || || Sbjct 2912 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGACTCGACC 2971 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 ||||| || || || || || |||| ||||| ||||| || ||||| || Sbjct 2972 TCGAGGGTGATTGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 3021 >seq37186 Length=985 Score = 129 bits (142), Expect = 6e-25 Identities = 156/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTC 134563 ||||| || || || || ||||| || ||||||||||| ||||| | | || ||| || Sbjct 1 ACGAGATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCCGCCAATGTTCTGCC-GTCTTC 59 Query 134564 GAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTG 134623 ||||| ||||| || || ||||| | |||||| || || || || || || || ||||| Sbjct 60 AAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATACCCTCCTTGTCTTG 119 Query 134624 AATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTT 134683 || || |||||| ||| | |||||||| ||||| || | ||||||||| || Sbjct 120 GATCTTAGCTTTGACATTGTCAATGGTGTCGGAGCTCTCCACCTCCAAAGTAATGGTCTT 179 Query 134684 ACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || ||||||||||| ||||| Sbjct 180 GCCGGTCAATGTCTTAACGAAAATCTGCAT 209 Score = 111 bits (122), Expect = 2e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 134517 GTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCC 134575 || || || ||||| ||||||||||| ||||| | | || ||| || | |||||| || Sbjct 470 GTCGACTCTTTTTGGATGTTGTAGTCAGCCAATGTTCTGCC-GTCCTCCAACTGTTTCCC 528 Query 134576 TGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTT 134635 || || || | | |||||||||||| || || || ||||| || ||||| || ||| Sbjct 529 GGCGAAGATAAGCCTCTGCTGATCGGGAGGGATACCCTCTTTGTCCTGAATCTTGGCTTT 588 Query 134636 GACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGT 134695 || ||| | |||||||| |||||| ||||| || || || || || || | ||| Sbjct 589 AACGTTGTCGATGGTGTCGGAGCTTTCCACCTCGAGGGTGATCGTCTTCCCAGTGAGAGT 648 Query 134696 TTTAACGAAAATTTGCAT 134713 |||||||| |||||||| Sbjct 649 CTTAACGAAGATTTGCAT 666 Score = 98.7 bits (108), Expect = 1e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 ||||| || | || || |||||||| ||||||||||| | | || | | ||| Sbjct 229 ACGAGATGCAAAGTTGACTCCTTTTGGATGTTGTAGTCAGCGAGAGTCCTGCCGACCTCG 288 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| ||||| ||||| ||||| | |||||| || || || || || || || || ||| Sbjct 289 AGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGA 348 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || ||||| || | ||||| || ||||| |||||||| ||||| || Sbjct 349 ATCTTAGCCTTGACATTATCGATGGTGTCCGAGCTCTCCACCTCGAGAGTGATGGTCTTT 408 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| | || || ||||| || ||||| Sbjct 409 CCGGTAAGGGTCTTGACGAAGATCTGCAT 437 >seq25552 Length=2169 Score = 129 bits (142), Expect = 6e-25 Identities = 148/195 (76%), Gaps = 3/195 (2%) Strand=Plus/Minus Query 134521 ATTCCTTT-TGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGC 134578 || ||||| || ||||||||||| ||||| | | | || ||||||||||| || || Sbjct 438 ATACCTTTCTGGATGTTGTAGTCAGCCAAAGTACGGCCA-TCTTCGAGCTGTTTACCGGC 380 Query 134579 AAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGAC 134638 || |||| |||||||||||| || || || |||||||| ||||| || || |||||| Sbjct 379 GAAGATCAGACGCTGCTGATCCGGAGGGATACCTTCTTTGTCTTGGATCTTGGCTTTGAC 320 Query 134639 CGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTT 134698 ||| | |||||||| || || || |||||||| ||||| || || |||| ||||| Sbjct 319 ATTGTCGATGGTGTCGGAGGACTCGACTTCGAGAGTGATGGTCTTGCCCGTTAGGGTTTT 260 Query 134699 AACGAAAATTTGCAT 134713 ||||| || ||||| Sbjct 259 CACGAAGATCTGCAT 245 >seq806 Length=29032 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||||| || ||||| || ||||| || |||||||||||| | Sbjct 17950 CCACCACGGAGACGGAGGACGAGATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 18009 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | ||| |||||||| || || || || |||| |||||||| || ||||| Sbjct 18010 AGTGTGCGGCCGTCTTCGAGCTGCTTCCCGGCGAAGATCAGTCGCTGCTGGTCCGGCGGG 18069 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || || || || || ||||| ||| | |||||||| || || || Sbjct 18070 ATCCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGACTCGACC 18129 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 ||||| || || || || || |||| ||||| ||||| || ||||| || Sbjct 18130 TCGAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 18179 >seq11485 Length=6519 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||||| || || || || ||||| || |||||||| ||| | Sbjct 4704 CCACCACGGAGACGAAGTACGAGATGGAGAGTTGACTCCTTCTGGATGTTGTAATCGGCC 4645 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | ||| || ||||| || || || || || | | |||||| ||||| || Sbjct 4644 AGGGTGCGTCCGTCTTCTAGCTGCTTCCCAGCGAAGATGAGCCTCTGCTGGTCGGGAGGG 4585 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || || || || ||| ||||| ||| | |||||||| || || Sbjct 4584 ATGCCTTCCTTGTCCTGGATCTTTGCCTTGACATTGTCTATAGTGTCGGAGCTCTCGACC 4525 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 |||||||| ||||| || ||||| | ||||| |||||||||||||| Sbjct 4524 TCGAGAGTGATGGTCTTGCCGGTGAGTGTTTTCACGAAAATTTGCAT 4478 Score = 111 bits (122), Expect = 2e-19 Identities = 149/205 (73%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTCGAGCT 134568 ||| || || || ||||| || |||||||| || ||||| | | || || ||||||| Sbjct 5137 GTGAAGAGTAGACTCCTTCTGGATGTTGTAATCAGCCAAAG-TCCGACCATCCTCGAGCT 5079 Query 134569 GTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTT 134628 |||| || || || || | | |||||| || || || |||||||| || || ||||| | Sbjct 5078 GTTTCCCAGCGAAGATGAGTCTCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGAATCT 5019 Query 134629 TTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGG 134688 | ||| || ||| | ||||| || ||||| || || |||||||||||||||| Sbjct 5018 TCGCTTTCACATTGTCGATCGTGTCAGAGCTCTCCACTTCAAGGGTAATGGTTTTACCGG 4959 Query 134689 TTAAAGTTTTAACGAAAATTTGCAT 134713 | | || || |||||||| ||||| Sbjct 4958 TGAGTGTCTTGACGAAAATCTGCAT 4934 >seq12662 Length=5898 Score = 122 bits (134), Expect = 9e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| |||||||| | ||| | || || ||||| || |||||||||||| || Sbjct 3943 CCACCACGGAGACGCAACACCAAGTGAATGGTTGACTCCTTCTGGATGTTGTAGTCGGCA 3884 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| || || || ||||| || || || || || | ||||||||| || || || Sbjct 3883 AGGGTGCGACCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGG 3824 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || ||||| || || ||| || || | ||||| || || || Sbjct 3823 ATGCCTTCCTTATCTTGGATCTTGGCTTTCACGTTATCAATCGTGTCCGAGCTCTCAACT 3764 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || ||||| ||||| || || || || ||||| || ||||| Sbjct 3763 TCGAGGGTGATGGTCTTACCAGTCAAGGTCTTCACGAAGATCTGCAT 3717 Score = 114 bits (126), Expect = 1e-20 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTC 134563 ||||| || || || || ||||| || ||||||||||| || | | | || ||| || Sbjct 3697 ACGAGATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCAGCGAGAGTTCTG-CCGTCTTC 3639 Query 134564 GAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTG 134623 ||||| |||||||| || ||||| | |||||| || || || || || || || ||||| Sbjct 3638 AAGCTGCTTGCCTGCGAAGATCAACCTCTGCTGGTCCGGTGGGATCCCCTCCTTGTCTTG 3579 Query 134624 AATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTT 134683 || ||| |||||| ||| | |||||||| ||||| || || ||||| || || Sbjct 3578 GATCTTTGCTTTGACGTTGTCGATGGTGTCGGAGCTCTCCACCTCTAGGGTAATCGTCTT 3519 Query 134684 ACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || |||||||| || ||||| Sbjct 3518 TCCCGTCAAGGTCTTAACGAAGATCTGCAT 3489 >seq2054 Length=20018 Score = 122 bits (134), Expect = 9e-23 Identities = 153/205 (75%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 134524 CCTTT-TGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAA 134581 ||||| || ||||||||||| ||||| | | | || ||||||||||| || || || Sbjct 3203 CCTTTCTGGATGTTGTAGTCAGCCAAAGTACGGCCA-TCTTCGAGCTGTTTACCGGCGAA 3261 Query 134582 AATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGC 134641 ||||| | ||||||||| || || || |||||||| ||||| || || ||||| Sbjct 3262 GATCAATCTCTGCTGATCTGGAGGGATACCTTCTTTGTCTTGGATCTTGGCCTTGACATT 3321 Query 134642 GTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAAC 134701 ||| | |||||||| || || || ||||| || ||||| || ||||||| ||||| || Sbjct 3322 GTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTTCCGGTTAGGGTTTTCAC 3381 Query 134702 GAAAATTTGCAT-TTTGTTTTTGTT 134725 ||| || ||||| |||| || ||| Sbjct 3382 GAAGATCTGCATCTTTGAGTTAGTT 3406 >seq24793 Length=2311 Score = 120 bits (132), Expect = 3e-22 Identities = 154/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGT-CGCCAACGGTGTGAGAGTCGTC 134563 ||||| || || || || ||||| || |||||||||| |||||| | | || ||| || Sbjct 1405 ACGAGATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCCGCCAATGTTCTG-CCGTCTTC 1463 Query 134564 GAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTG 134623 ||||| ||||| || || ||||| | |||||| || || || || || || || ||||| Sbjct 1464 AAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATACCCTCCTTGTCTTG 1523 Query 134624 AATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTT 134683 || ||| |||||| ||| | |||||||| ||||| || || ||||| || || Sbjct 1524 GATCTTTGCTTTGACGTTGTCGATGGTGTCGGAGCTCTCCACCTCTAGGGTAATCGTCTT 1583 Query 134684 ACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || |||||||| || ||||| Sbjct 1584 TCCCGTCAAGGTCTTAACGAAGATCTGCAT 1613 >seq964 Length=27231 Score = 118 bits (130), Expect = 1e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || ||||| || ||||| ||||| || ||||| || ||||||||||| | | ||| || Sbjct 9938 AGACGCAAGACAAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCAGCGAGCGTGCGA 9879 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||| || || |||||||| | | ||||||||| || || ||||| || Sbjct 9878 CCATCCTCCAGCTGCTTACCAGCAAAAATAAGCCTCTGCTGATCCGGAGGGATGCCCTCC 9819 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || ||||| ||| | |||||||| || || || ||||| Sbjct 9818 TTGTCCTGGATCTTCGCCTTGACATTGTCAATAGTGTCGGAGCTCTCAACCTCCAGAGTG 9759 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || || ||||| || ||||| || ||||| Sbjct 9758 ATGGTCTTTCCCGTCAAAGTCTTGACGAAGATCTGCAT 9721 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || ||||||||||| | ||| || || ||||| || || || |||||||||||||| | Sbjct 10175 CCACCTCTGAGTCGAAGCACAAGATGCAGCGTAGACTCTTTCTGAATGTTGTAGTCAGCT 10116 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || || ||||| || || ||||| || | | |||||| || || || Sbjct 10115 AGCGTGCGTCCATCCTCCAGCTGCTTACCGGCAAAGATGAGCCTCTGCTGGTCCGGTGGG 10056 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || ||||| || || || || ||||| ||| | ||||| || || || Sbjct 10055 ATACCCTCTTTATCCTGGATCTTAGCCTTGACGTTGTCAATGGTGTCTGAGCTCTCAACC 9996 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | ||| |||||||||||||| | || || || || |||||||| Sbjct 9995 TCCAAAGTGATGGTTTTACCGGTGAGGGTCTTGACAAAGATTTGCAT 9949 Score = 102 bits (112), Expect = 8e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 ||||| || || || || ||||| || || ||||| ||| | | ||| | || ||| Sbjct 9701 ACGAGATGGAGAGTCGACTCCTTCTGGATATTGTAATCGGCCAAGGTACGTCCATCCTCG 9642 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 |||||||| || || || || | | |||||| || || || || ||||| || || || Sbjct 9641 AGCTGTTTACCGGCGAAGATGAGCCTCTGCTGGTCCGGAGGAATACCTTCCTTGTCCTGG 9582 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || ||||| || | || ||||| || || |||||||| ||||| || Sbjct 9581 ATCTTAGCCTTGACGTTATCGATGGTATCGGAGCTCTCGACTTCGAGAGTGATGGTCTTG 9522 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| | |||||| |||||||||||||| Sbjct 9521 CCGGTGAGAGTTTTCACGAAAATTTGCAT 9493 >seq6096 Length=10951 Score = 113 bits (124), Expect = 5e-20 Identities = 131/177 (74%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 134486 TCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCC 134545 ||||||||| || || | || ||||| ||||| || ||||| || |||||||||||| | Sbjct 10774 TCCTCCTCTCAGACGGAGAACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 10833 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 | |||| | ||| |||||||| || || || ||||| | |||||||| || || || Sbjct 10834 GAGGGTGCGTCCGTCCTCGAGCTGCTTTCCGGCGAAAATGAGGCGCTGCTGGTCCGGAGG 10893 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTC 134662 |||||||| || ||||| || || ||||| ||| | |||||||| || || Sbjct 10894 GATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGACTC 10950 >seq4396 Length=13502 Score = 109 bits (120), Expect = 6e-19 Identities = 157/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554 || || ||||| | ||| || || || || || ||||||||||| || ||||| |||| | Sbjct 12708 AGACGTAACACCAAGTGAAGGGTTGACTCTTTCTGAATGTTGTAATCAGCCAA-GGTGCG 12650 Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614 | || || ||||| ||||| || || || | ||||||||| || || || || || || Sbjct 12649 ACCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGGATCCCCTC 12590 Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674 || || ||||| || ||||| ||| | |||||||| ||||| || | ||| Sbjct 12589 CTTGTCCTGAATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCCACCTCCAAAGT 12530 Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| | || ||||| ||||| ||||| Sbjct 12529 GATAGTCTTCCCGGTCAGTGTCTTAACAAAAATCTGCAT 12491 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || || || || || || || ||||| ||||||||||| | | || | || || Sbjct 12039 ACAAGATGAAGGGTCGACTCTTTTTGGATGTTGTAGTCAGCGAGAGTACGCCCATCTTCA 11980 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 || || || || || || || | | ||||||||| || || |||||||| || || ||| Sbjct 11979 AGTTGCTTCCCGGCGAAGATAAGCCTCTGCTGATCCGGGGGAATGCCTTCCTTGTCCTGA 11920 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || ||| || ||| | ||||| || |||||| ||||| || || || || Sbjct 11919 ATCTTGGCTTTAACGTTGTCGATGGTGTCTGAGCTTTCCACCTCGAGGGTGATCGTCTTT 11860 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 ||||| | ||| |||||||| || ||||| || Sbjct 11859 CCGGTGAGAGTCTTAACGAATATCTGCATCTT 11828 >seq23940 Length=2465 Score = 107 bits (118), Expect = 2e-18 Identities = 110/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 134486 TCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCC 134545 ||||||||| || || | || ||||| ||||| || ||||| || |||||||||||| | Sbjct 2300 TCCTCCTCTCAGACGGAGAACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 2359 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 | |||| | ||| |||||||| || || || ||||| | |||||||| || || || Sbjct 2360 GAGGGTGCGTCCGTCCTCGAGCTGCTTTCCGGCGAAAATGAGGCGCTGCTGGTCCGGAGG 2419 Query 134606 TATGCCTTCTTTTTCTTGAATTTT 134629 |||||||| || ||||| || || Sbjct 2420 GATGCCTTCCTTGTCTTGGATCTT 2443 >seq7348 Length=9517 Score = 102 bits (112), Expect = 8e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || || || ||||| || ||||||||||| | | |||| || || || ||||| Sbjct 428 GTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCTGCTAAGGTGCGACCATCCTCAAGCTG 369 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 || || || || || | |||||||||||| || || |||||||| || || || || || Sbjct 368 CTTTCCAGCGAAGATGAGACGCTGCTGATCCGGAGGGATGCCTTCCTTGTCCTGGATCTT 309 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 || || ||| | ||||| || ||||| || || || ||||| ||||| || Sbjct 308 GGCCTTTACGTTGTCAATGGTGTCAGAGCTCTCCACCTCAAGTGTGATGGTCTTACCAGT 249 Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| || ||||| Sbjct 248 CAAGGTCTTCACGAATATCTGCAT 225 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 134504 CACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTC 134563 ||| | ||| || || || ||||| || |||||||||||| ||| ||| || || || Sbjct 206 CACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCAAGAGTGCGACCATCCTC 147 Query 134564 GAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTG 134623 |||||| || || || || || | ||||||||| || || || || ||||| || || || Sbjct 146 GAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTGTCCTG 87 Query 134624 AATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTT 134683 || || || || ||| | |||||||| || || || | || ||||| || Sbjct 86 GATCTTAGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCAACTTCCAATGTGATGGTCTT 27 Query 134684 ACCGGTTAAAGTTTTAACGAAAAT 134707 ||||| | ||| || ||||| || Sbjct 26 GCCGGTAAGAGTCTTCACGAAGAT 3 >seq20570 Length=3172 Score = 100 bits (110), Expect = 3e-16 Identities = 155/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554 || |||||||| | ||| || || || ||||| || ||||||||||| ||||| ||| Sbjct 301 AGACGCAACACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCCAA-GGTTCT 359 Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614 ||| || | ||| || ||||| || || | | ||||||||| || || || ||||| Sbjct 360 CCCGTCCTCCAACTGCTTTCCTGCGAAGATAAGCCTCTGCTGATCCGGAGGAATCCCTTC 419 Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674 || || || || || || || ||| | ||||| || |||||| ||||| || Sbjct 420 CTTGTCCTGGATCTTGGCCTTAACGTTGTCGATGGTGTCAGAGCTTTCCACCTCGAGGGT 479 Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || | |||||| ||||| || ||||| Sbjct 480 GATTGTCTTTCCTGTGAGAGTTTTCACGAAGATCTGCAT 518 >seq3737 Length=14779 Score = 91.5 bits (100), Expect = 1e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 134559 TCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTT 134618 || |||||||| || || || || ||||| | |||||||||||| || || ||||| || Sbjct 9355 TCTTCGAGCTGCTTACCGGCGAAGATCAACCTCTGCTGATCGGGAGGGATACCTTCCTTA 9414 Query 134619 TCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATG 134678 || || || || | | || ||| | |||||||| ||| || ||||| || || Sbjct 9415 TCGTGGATCTTGGCTGTAACGTTGTCGATCGTGTCGGAGCTTTCAACCTCGAGGGTGATC 9474 Query 134679 GTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || ||||| | ||| |||||||| || ||||| Sbjct 9475 GTCTTTCCGGTAAGAGTCTTAACGAATATCTGCAT 9509 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 504989456884640