Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Raphanus_20raphanistrum_20subsp._20raphanistrum_20[genbank_20GCA_5F0
00769845.1_202014-10-28] 64,732 sequences; 253,833,977 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq41676 87.8 1e-12
>seq41676
Length=800
Score = 87.8 bits (96), Expect = 1e-12
Identities = 129/183 (70%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 40982 GATTAAATCCGATCCCGATAGCCGACGTATAATATTGTGCGCGTGGAACCCAACGGACGT 41041
||| ||| | |||| ||| || || |||||| ||| || ||||| || | ||| |
Sbjct 751 GATCAAAAACAATCCTGATGATCGCCGGATAATAATGTCAGCTTGGAATCCTTCTGACCT 692
Query 41042 ACATTTGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCAATGGTGA 41101
| |||||||| | || ||||| || |||| ||||||||| ||| ||||| ||
Sbjct 691 TAAGCTGATGGCACTTCCTCCTTGCCACATGTTTCCTCAGTTTTATGTTGCAAATGGAGA 632
Query 41102 ACTGTCATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACAT 41161
| || |||||| ||||||| | |||| ||| || | || || || |||||||||||
Sbjct 631 GTTTTCGTGTCAAATGTATCAGTGCTCAGCTGATATCAGTCTTGGTGTACCGTTTAACAT 572
Query 41162 AGc 41164
||
Sbjct 571 TGC 569
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397142438515660
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |