Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raphanus_20raphanistrum_20subsp._20raphanistrum_20[genbank_20GCA_5F0 00769845.1_202014-10-28] 64,732 sequences; 253,833,977 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq1703 143 2e-29 seq25552 122 7e-23 seq964 113 4e-20 seq24793 109 5e-19 seq7912 105 6e-18 seq3667 104 2e-17 seq1045 104 2e-17 seq12662 102 7e-17 seq806 102 7e-17 seq4396 100 2e-16 seq37186 98.7 8e-16 seq11485 95.1 1e-14 seq7348 87.8 2e-12 seq20570 86.0 5e-12 seq2054 82.4 6e-11 >seq1703 Length=21771 Score = 143 bits (158), Expect = 2e-29 Identities = 169/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 ||||||| || | ||||| ||||| || | |||||| || || || |||||||| ||| Sbjct 18822 TGCCTCCACGTAGACGCAAGACCAAGTGAAGCGTAGACTCCTTCTGGATATTGTAATCGG 18881 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 || | |||| | || |||||||| || |||||| | ||||||||||| |||||||| | Sbjct 18882 CCAAGGTGCGACCATCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGAG 18941 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | || || || || ||||||| ||||| | | || | ||||| | | ||| | Sbjct 18942 GGATCCCTTCCTTGTCCTGGATCTTGGCTTTCACGTTGTCGATGGTGTCGGAGCTTTCCA 19001 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || || || || | || || || ||||||||||| ||||||||||| Sbjct 19002 CCTCGAGGGTGATTGTCTTCCCGGTGAGAGTTTTCACGAAGATTTGCAT 19050 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | || || || || || ||||||||||| || | |||| | || ||| Sbjct 17930 ACCAAGTGAAGAGTCGACTCCTTCTGGATATTGTAGTCTGCCAAGGTGCGACCATCCTCG 17989 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| || || ||| | ||||||||||| |||||||| || | ||| || || || | Sbjct 17990 AGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCCGGAGGGATACCTTCCTTGTCCTGG 18049 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| |||| | | || | |||||| | | ||||| || | || |||| || Sbjct 18050 ATCTTAGCCTTCACGTTGTCAATAGTGTCAGAGCTCTCAACCTCCAATGTGATAGTCTTC 18109 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || ||||| || |||||||| ||||| Sbjct 18110 CCGGTAAGAGTCTTGACAAAGATCTGCAT 18138 >seq25552 Length=2169 Score = 122 bits (134), Expect = 7e-23 Identities = 141/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 27058 CTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAA 27117 |||| || || |||||||| || | || | ||||||||||||||||||||| | | Sbjct 434 CTTTCTGGATGTTGTAGTCAGCCAAAGTACGGCCATCTTCGAGCTGTTTACCGGCGAAGA 375 Query 27118 TGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTT 27177 | |||||||| |||||||| || | ||| ||||| || ||||||| ||| | | | Sbjct 374 TCAGACGCTGCTGATCCGGAGGGATACCTTCTTTGTCTTGGATCTTGGCTTTGACATTGT 315 Query 27178 CTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAA 27237 | | ||||| | || || ||||| ||||| || | |||||||| || |||||||| | Sbjct 314 CGATGGTGTCGGAGGACTCGACTTCGAGAGTGATGGTCTTGCCCGTTAGGGTTTTCACGA 255 Query 27238 AGATTTGCAT 27247 |||| ||||| Sbjct 254 AGATCTGCAT 245 >seq964 Length=27231 Score = 113 bits (124), Expect = 4e-20 Identities = 150/206 (73%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 27044 ATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTCGAGCT 27102 ||| | |||||| ||||| ||||| |||||||| ||| || ||| | || || |||| Sbjct 10152 ATGCAGCGTAGACTCTTTCTGAATGTTGTAGTCAGCTAGCGT-GCGTCCATCCTCCAGCT 10094 Query 27103 GTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCT 27162 | |||||||| | ||||| | ||| || ||||| || | |||||||||||| ||||| Sbjct 10093 GCTTACCGGCAAAGATGAGCCTCTGCTGGTCCGGTGGGATACCCTCTTTATCCTGGATCT 10034 Query 27163 TGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCG 27222 | || | | | || | ||||||| | ||||| || | ||| || | ||| || | Sbjct 10033 TAGCCTTGACGTTGTCAATGGTGTCTGAGCTCTCAACCTCCAAAGTGATGGTTTTACCGG 9974 Query 27223 TCAGAGTTTTCACAAAGATTTGCATA 27248 | || || || ||||||||||||||| Sbjct 9973 TGAGGGTCTTGACAAAGATTTGCATA 9948 Score = 100 bits (110), Expect = 2e-16 Identities = 147/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || |||||||| ||| || | | || | || ||||||||||||||| Sbjct 9689 GTCGACTCCTTCTGGATATTGTAATCGGCCAAGGTACGTCCATCCTCGAGCTGTTTACCG 9630 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | ||||| | ||| || ||||| || | ||| || || || |||||| || Sbjct 9629 GCGAAGATGAGCCTCTGCTGGTCCGGAGGAATACCTTCCTTGTCCTGGATCTTAGCCTTG 9570 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | || || | | || ||||| ||||| || | ||||| || |||||| Sbjct 9569 ACGTTATCGATGGTATCGGAGCTCTCGACTTCGAGAGTGATGGTCTTGCCGGTGAGAGTT 9510 Query 27231 TTCACAAAGATTTGCATAGCTGCTAAA 27257 ||||| || |||||||| |||| ||| Sbjct 9509 TTCACGAAAATTTGCAT--CTGCAAAA 9485 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | ||| || || || || ||||||||||| | |||| | || || Sbjct 10613 ACCAAGTGAAGCGTCGACTCCTTCTGGATATTGTAGTCAGCAAGCGTGCGACCATCCTCA 10554 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| ||||| ||| | ||||| | |||||| ||||| || | || || || || Sbjct 10553 AGCTGCTTACCAGCGAAGATGAGTCTCTGTTGGTCCGGAGGGATCCCTTCCTTGTCCTGA 10494 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 || || |||| | || | ||||||| | |||||||| | || |||| ||| Sbjct 10493 ATTTTAGCCTTCACATTGTCGATTGTGTCTGAGCTCTCAACTTCCAAGGTAATAGTCTTG 10434 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || |||||||| |||||||||||||||||| Sbjct 10433 CCTGTCAGAGTCTTCACAAAGATTTGCATA 10404 >seq24793 Length=2311 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || |||| ||||| ||||| || | ||||| || || || ||||||||||| Sbjct 1159 CCACCACGCAGACGCAAGACCAAGTGAAGTGTAGACTCCTTCTGGATATTGTAGTCAGCG 1218 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | || | || |||||||| || || ||| | ||||||||||| || || || || Sbjct 1219 AGAGTCCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGG 1278 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | || || ||||| ||||||| ||||| | | || | ||||| | | |||||| Sbjct 1279 ATCCCTTCCTTATCTTGGATCTTGGCTTTCACGTTATCAATCGTGTCCGAGCTCTCAACT 1338 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || | || || |||| || ||||||||||| |||||| Sbjct 1339 TCGAGGGTGATGGTCTTACCAGTCAAGGTCTTCACAAAGATCTGCATA 1386 >seq7912 Length=9007 Score = 105 bits (116), Expect = 6e-18 Identities = 148/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 27044 ATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTCGAGCT 27102 ||| | |||||| || ||||| || |||||||| || ||||| || |||||||||||| Sbjct 6587 ATGAAGCGTAGACTCCTTTTGGATGTTGTAGTCTGCCAATGTTCTGC-CGTCTTCGAGCT 6645 Query 27103 GTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCT 27162 | || |||||| | ||||| | ||| ||||| || || | ||| || || || |||| Sbjct 6646 GCTTGCCGGCGAAGATGAGCCTCTGCTGATCGGGAGGGATACCTTCCTTGTCCTGAATCT 6705 Query 27163 TGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCG 27222 || ||| | | | || | ||||| | | ||| || || || || || | || |||| Sbjct 6706 TGGCTTTGACGTTGTCGATTGTGTCGGAGCTTTCCACCTCGAGGGTGATGGTCTTTCCCG 6765 Query 27223 TCAGAGTTTTCACAAAGATTTGCAT 27247 | ||||| || || ||||| ||||| Sbjct 6766 TGAGAGTCTTAACGAAGATCTGCAT 6790 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 ||||| ||||| || | || || || ||||| |||||||||||| | | |||| | Sbjct 6120 CGCAACACCAAGTGAAGTGTGGACTCCTTTTGGATATTGTAGTCGGCTAAGGTGCGACCA 6179 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 || || ||||| || || ||| | ||||||||||| || ||||| || | ||| || ||| Sbjct 6180 TCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTA 6239 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||||||| || | | || | ||||| | | || || || | || || Sbjct 6240 TCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCAGAGCTCTCCACCTCCAACGTGATG 6299 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | ||||| || || || || |||||||| ||||| Sbjct 6300 GTCTTGCCGGTAAGTGTCTTGACAAAGATCTGCAT 6334 >seq3667 Length=14967 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 ||||| || || || || ||||||||| | | ||||| |||| ||||||||||| ||| Sbjct 5525 GTAGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCCTCGAGCTGTTTCCCG 5584 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | || || ||||| || ||||| || | || || || || ||||||| ||| Sbjct 5585 GCGAAGATCAGCCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCTTTG 5644 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | ||||| | | ||| || || || || || | || ||||| || ||| Sbjct 5645 ACATTGTCGATGGTGTCGGAAGATTCGACCTCGAGGGTGATCGTCTTCCCCGTTAGGGTT 5704 Query 27231 TTCACAAAGATTTGCAT 27247 ||||| ||||| ||||| Sbjct 5705 TTCACGAAGATCTGCAT 5721 >seq1045 Length=26565 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 ||||| || || || || ||||||||| | | ||||| |||| ||||||||||| ||| Sbjct 2822 GTAGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCCTCGAGCTGTTTCCCG 2881 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | || || ||||| || ||||| || | || || || || ||||||| || Sbjct 2882 GCGAAGATCAGCCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTG 2941 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||| | || || || || || || || | || ||||| || ||| Sbjct 2942 ACGTTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATTGTCTTCCCCGTTAGGGTT 3001 Query 27231 TTCACAAAGATTTGCAT 27247 ||||| ||||| ||||| Sbjct 3002 TTCACGAAGATCTGCAT 3018 >seq12662 Length=5898 Score = 102 bits (112), Expect = 7e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 ||||| ||||| || | || || || || || || ||||||||| | | |||| | Sbjct 3931 CGCAACACCAAGTGAATGGTTGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGACCA 3872 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 || || ||||| || || ||| | ||||||||||| || || || || | || || ||| Sbjct 3871 TCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGGATGCCTTCCTTA 3812 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||||||| ||||| | | || | ||||| | | |||||||| || || || Sbjct 3811 TCTTGGATCTTGGCTTTCACGTTATCAATCGTGTCCGAGCTCTCAACTTCGAGGGTGATG 3752 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 | || || |||| || ||||| ||||| |||||| Sbjct 3751 GTCTTACCAGTCAAGGTCTTCACGAAGATCTGCATA 3716 >seq806 Length=29032 Score = 102 bits (112), Expect = 7e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 27044 ATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTG 27103 ||| | ||| || || || || || ||||||||| | |||| ||||||||||||| Sbjct 17973 ATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGTGTGCGGCCGTCTTCGAGCTG 18032 Query 27104 TTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTT 27163 || |||||| | || || ||||| || |||||||| | || || || || |||||| Sbjct 18033 CTTCCCGGCGAAGATCAGTCGCTGCTGGTCCGGCGGGATCCCTTCCTTGTCCTGGATCTT 18092 Query 27164 GTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGT 27223 | || | | | || | ||||| | || || || || || ||||| | || ||||| Sbjct 18093 GGCCTTGACGTTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTTATCGTCTTCCCCGT 18152 Query 27224 CAGAGTTTTCACAAAGATTTGCAT 27247 || |||||||| ||||| ||||| Sbjct 18153 TAGGGTTTTCACGAAGATCTGCAT 18176 >seq4396 Length=13502 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| |||| ||||| ||||| || | ||||| || || || || || ||||| | Sbjct 328 CCTCCACGCAGACGCAACACCAAGTGAAGTGTAGACTCCTTCTGGATGTTATAGTCAGCC 269 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | |||| | || |||||||| || || ||| | ||||||||||| || ||||| || Sbjct 268 AAGGTGCGACCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGG 209 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| || || ||||| || | | | || | ||||| | | |||||| Sbjct 208 ATTCCCTCCTTGTCCTGAATCTTAGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCAACT 149 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || | || || || || || || |||||||| |||||| Sbjct 148 TCGAGGGTGATTGTCTTTCCGGTTAGTGTCTTGACAAAGATCTGCATA 101 Score = 98.7 bits (108), Expect = 8e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCT 27079 || || |||| ||||| ||||| || | ||||| || || || ||||||||||| || Sbjct 556 CCACCACGCAGACGCAAGACCAAGTGAAGTGTAGACTCCTTCTGGATATTGTAGTCAGCG 497 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 || || |||| |||||||| || || ||| | ||||||||||| || || || || Sbjct 496 AGAGTCCTGC-CGTCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGAGG 438 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | || || ||||| ||||||| ||||| | | || | ||||| | | || || Sbjct 437 GATCCCTTCCTTATCTTGGATCTTGGCTTTCACGTTATCAATCGTGTCCGAGCTCTCCAC 378 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || | || || |||| || || || ||||||||||| Sbjct 377 CTCCAGTGTGATGGTCTTACCAGTCAAGGTCTTGACGAAGATTTGCAT 330 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || |||| || || ||||| || | || || ||||| ||||| ||||| || | Sbjct 12717 CCACCACGCAGACGTAACACCAAGTGAAGGGTTGACTCTTTCTGAATGTTGTAATCAGCC 12658 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | |||| | || || ||||| || || ||| | ||||||||||| || ||||| || Sbjct 12657 AAGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGG 12598 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| || || |||||| || | | | || | ||||| | | || || Sbjct 12597 ATCCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCCACC 12538 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCT 27251 || | ||| |||| || || ||||| || || ||||| || |||||| || Sbjct 12537 TCCAAAGTGATAGTCTTCCCGGTCAGTGTCTTAACAAAAATCTGCATACCT 12487 >seq37186 Length=985 Score = 98.7 bits (108), Expect = 8e-16 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTCGAGCTGTTTACC 27109 || || |||||||| || |||||||| || ||||| || |||| || | |||||| || Sbjct 470 GTCGACTCTTTTTGGATGTTGTAGTCAGCCAATGTTCTGC-CGTCCTCCAACTGTTTCCC 528 Query 27110 GGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTT 27169 |||| | || || | ||| ||||| || || | ||||||||| || |||||| ||| Sbjct 529 GGCGAAGATAAGCCTCTGCTGATCGGGAGGGATACCCTCTTTGTCCTGAATCTTGGCTTT 588 Query 27170 CAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGT 27229 | | | || | ||||| | | ||| || || || || || | || || || ||||| Sbjct 589 AACGTTGTCGATGGTGTCGGAGCTTTCCACCTCGAGGGTGATCGTCTTCCCAGTGAGAGT 648 Query 27230 TTTCACAAAGATTTGCAT 27247 || || ||||||||||| Sbjct 649 CTTAACGAAGATTTGCAT 666 >seq11485 Length=6519 Score = 95.1 bits (104), Expect = 1e-14 Identities = 146/206 (71%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 27044 ATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGT-TGCGCTCGTCTTCGAGCT 27102 ||| | |||||| || || ||||||||||| || | || | |||| | || || |||| Sbjct 4909 ATGAAGCGTAGACTCCTTCTGAATATTGTAATC-CGCAAGCGTGCGTCCATCCTCAAGCT 4851 Query 27103 GTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCT 27162 ||||||| ||| | ||||| | ||| || ||||| || | || || || || ||||| Sbjct 4850 GTTTACCAGCGAAGATGAGTCTCTGCTGGTCCGGAGGAATTCCTTCCTTGTCCTGGATCT 4791 Query 27163 TGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCG 27222 | ||||| | || | |||||| | | ||||| || | ||| || | ||||| | Sbjct 4790 TTGCTTTCACATTGTCAATAGTGTCGGAGCTCTCAACCTCCAAAGTGATGGTCTTGCCTG 4731 Query 27223 TCAGAGTTTTCACAAAGATTTGCATA 27248 ||| ||| || ||||| || |||||| Sbjct 4730 TCAAAGTCTTGACAAAAATCTGCATA 4705 >seq7348 Length=9517 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | || || || || || || ||||||||| | |||| | || ||| Sbjct 205 ACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCAAGAGTGCGACCATCCTCG 146 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| || || ||| | ||||||||||| || ||||| || | ||| || || || | Sbjct 145 AGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTGTCCTGG 86 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| |||| | | || | ||||| | | |||||||| | || || | ||| Sbjct 85 ATCTTAGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCAACTTCCAATGTGATGGTCTTG 26 Query 27219 CCCGTCAGAGTTTTCACAAAGAT 27241 || || ||||| ||||| ||||| Sbjct 25 CCGGTAAGAGTCTTCACGAAGAT 3 >seq20570 Length=3172 Score = 86.0 bits (94), Expect = 5e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 ||||| ||||| || | ||||| || || || || |||||||| || | | | | || Sbjct 304 CGCAACACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCCAAGGTTCTCCCG 363 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 || || | ||| || || ||| | || || | ||| |||||||| || | || || || Sbjct 364 TCCTCCAACTGCTTTCCTGCGAAGATAAGCCTCTGCTGATCCGGAGGAATCCCTTCCTTG 423 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||||||| || | | | || | ||||| | | ||| || || || || || Sbjct 424 TCCTGGATCTTGGCCTTAACGTTGTCGATGGTGTCAGAGCTTTCCACCTCGAGGGTGATT 483 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || || || ||||||||||| ||||| ||||| Sbjct 484 GTCTTTCCTGTGAGAGTTTTCACGAAGATCTGCAT 518 >seq2054 Length=20018 Score = 82.4 bits (90), Expect = 6e-11 Identities = 132/190 (69%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 27058 CTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAA 27117 |||| || || |||||||| || | || | ||||||||||||||||||||| | | Sbjct 3204 CTTTCTGGATGTTGTAGTCAGCCAAAGTACGGCCATCTTCGAGCTGTTTACCGGCGAAGA 3263 Query 27118 TGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTT 27177 | | | ||| ||||| || || | ||| ||||| || ||||||| || | | | Sbjct 3264 TCAATCTCTGCTGATCTGGAGGGATACCTTCTTTGTCTTGGATCTTGGCCTTGACATTGT 3323 Query 27178 CTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAA 27237 | | ||||| | || || || || || || || | || || || || |||||||| | Sbjct 3324 CGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTTCCGGTTAGGGTTTTCACGA 3383 Query 27238 AGATTTGCAT 27247 |||| ||||| Sbjct 3384 AGATCTGCAT 3393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424599160221984