Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Raphanus_20raphanistrum_20subsp._20raphanistrum_20[genbank_20GCA_5F0
00769845.1_202014-10-28] 64,732 sequences; 253,833,977 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq4396 134 1e-26
seq14782 131 1e-25
seq7912 120 3e-22
seq1703 120 3e-22
seq11485 113 4e-20
seq25552 109 5e-19
seq964 105 6e-18
seq37186 104 2e-17
seq24793 104 2e-17
seq12662 104 2e-17
seq7348 104 2e-17
seq806 96.9 3e-15
seq3737 93.3 4e-14
seq2054 91.5 1e-13
>seq4396
Length=13502
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || || |||||||| ||| |||| ||| | || ||||| |||
Sbjct 12491 ATGCAGATTTTTGTTAAGACACTGACCGGGAAGACTATCACTTTGGAGGTGGAGAGCTCC 12550
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | ||||| || ||||| ||||| || || || ||||| || ||
Sbjct 12551 GACACCATTGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGGATCCCACCGGACCAG 12610
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | ||| ||||| || | || || || ||| | | |||||||||
Sbjct 12611 CAGCGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGTCGCACCTTGGCTGATTACAAC 12670
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
||||| || ||||| ||| | || ||||| || ||| |||| |||||
Sbjct 12671 ATTCAGAAAGAGTCAACCCTTCACTTGGTGTTACGTCTGCGTGGTGG 12717
Score = 107 bits (118), Expect = 2e-18
Identities = 146/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||||||||| || || ||||| ||||| ||| | || || || || |||||| ||
Sbjct 11831 ATGCAGATATTCGTTAAGACTCTCACCGGAAAGACGATCACCCTCGAGGTGGAAAGCTCA 11890
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | || ||| || ||||| ||||| |||||||| || || |||||
Sbjct 11891 GACACCATCGACAACGTTAAAGCCAAGATTCAGGACAAGGAAGGCATTCCCCCGGATCAG 11950
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | |||||| || ||| | ||||| | || | | || ||||||
Sbjct 11951 CAGAGGCTTATCTTCGCCGGGAAGCAACTTGAAGATGGGCGTACTCTCGCTGACTACAAC 12010
Query 27168 ATTCAAAAGGAGTCGACCTTACAT 27191
|| ||||| ||||||||| | |||
Sbjct 12011 ATCCAAAAAGAGTCGACCCTTCAT 12034
>seq14782
Length=4961
Score = 131 bits (144), Expect = 1e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || ||||| || || || ||| | || || || || || ||| | |||
Sbjct 2195 ATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATAACCCTAGAGGTCGAATCATCC 2136
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| |||| || | ||||| || ||||| ||||| ||||| || ||||| || ||
Sbjct 2135 GACACGATCGACAATGTCAAGGCCAAGATTCAGGACAAGGAAGGGATCCCACCGGACCAG 2076
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | |||||| || || |||||||| | |||| | | |||||||||
Sbjct 2075 CAGCGTCTGATCTTCGCCGGGAAGCAGCTGGAAGACGGAAGGACCCTCGCGGATTACAAC 2016
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| || ||||||||||| | || ||||| | ||| || | || ||
Sbjct 2015 ATCCAGAAGGAGTCGACTCTTCACCTGGTTCTCCGTCTGAGAGGAGG 1969
>seq7912
Length=9007
Score = 120 bits (132), Expect = 3e-22
Identities = 165/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| ||||| || ||| |||| || ||| | |||||| | || || || ||
Sbjct 6563 CATGCAGATCTTTGTCAAGACTTTGACTGGAAAGACCATTACTTTGGAGGTTGAGAGCTC 6504
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|||| | ||||| | ||||| || || |||||||| || || || || || || ||
Sbjct 6503 CGACACCATTGACAACGTCAAGGCCAAGATCCAAGACAAGGAGGGTATCCCTCCGGACCA 6444
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | | || | ||| || ||||| | || || || ||| | |||| |||||
Sbjct 6443 GCAGAGGCTCATCTTCGCTGGGAAACAGCTTGAGGATGGTCGCACCTTAGCCGACTACAA 6384
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||| ||||||||||| || | || ||||| |||||| |||| || |||||
Sbjct 6383 CATCCAAAAGGAGTCCACACTTCACTTGGTGTTGCGTCTGCGTGGAGGCAT 6333
Score = 113 bits (124), Expect = 4e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || ||||| || || ||| | || || || || |||||| |||
Sbjct 6790 ATGCAGATCTTCGTTAAGACTCTCACGGGAAAGACCATCACCCTCGAGGTGGAAAGCTCC 6731
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | |||||| || ||||| ||||| ||||| || || ||||||||
Sbjct 6730 GACACAATCGACAACGTCAAAGCCAAGATTCAGGACAAGGAAGGTATCCCTCCCGATCAG 6671
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | ||||||||| || | |||||| | || | | || ||||||
Sbjct 6670 CAGAGGCTCATCTTCGCCGGCAAGCAGCTCGAAGACGGCAGAACATTGGCAGACTACAAC 6611
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| ||||||||||| || | ||| | ||| | | | || ||||||||
Sbjct 6610 ATCCAAAAGGAGTCTACGCTTCATCTCGTTCTCAGGCTTCGTGGTGGCAT 6561
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| ||||| || || || ||||||||| | || || | || ||||| ||
Sbjct 6335 CATGCAGATCTTTGTCAAGACACTTACCGGCAAGACCATCACGTTGGAGGTGGAGAGCTC 6276
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | ||||| | ||||| || || || || || ||||| || || || || ||
Sbjct 6275 TGACACCATTGACAATGTCAAGGCCAAGATCCAGGATAAGGAAGGTATCCCTCCGGACCA 6216
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
|||||| | || | ||| ||||| || | || || || ||| | |||| |||||
Sbjct 6215 GCAGCGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGTCGCACCTTAGCCGACTACAA 6156
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| ||||||||||| || | || ||||| |||||| | || |||||
Sbjct 6155 TATCCAAAAGGAGTCCACACTTCACTTGGTGTTGCGTCTTCGTGGTGG 6108
>seq1703
Length=21771
Score = 120 bits (132), Expect = 3e-22
Identities = 165/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || || || |||| || ||| | || ||| | || ||||| ||
Sbjct 18367 CATGCAGATCTTCGTTAAGACGTTGACAGGAAAGACGATCACTTTAGAGGTGGAGAGTTC 18308
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|||| | ||||| | || ||| ||||| ||||||||||| || || || || || ||
Sbjct 18307 CGACACCATTGACAACGTGAAAGCGAAAATCCAAGACAAAGAGGGTATCCCTCCGGACCA 18248
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | | |||| ||| || || || | || || || ||| | | ||||||||
Sbjct 18247 GCAGAGGCTGATATTCGCTGGGAAGCAGCTCGAGGATGGTCGCACCTTGGCTGATTACAA 18188
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|||||| || ||||||||| | || ||||| || ||| | || ||||||||
Sbjct 18187 CATTCAGAAAGAGTCGACCCTTCACTTGGTGTTACGTCTCCGTGGTGGCAT 18137
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| ||||| || ||||| ||||| ||| |||| || | || || || ||
Sbjct 18139 CATGCAGATCTTTGTCAAGACTCTTACCGGGAAGACTATCACATTGGAGGTTGAGAGCTC 18080
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | ||||| | || || || || || ||||| ||||| || || || |||||
Sbjct 18079 TGACACTATTGACAACGTGAAGGCTAAGATCCAGGACAAGGAAGGTATCCCTCCGGATCA 18020
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
|||||| | || | ||| || || || | || || || ||| | | || |||||
Sbjct 18019 GCAGCGTCTCATCTTCGCTGGAAAGCAGCTCGAGGATGGTCGCACCTTGGCAGACTACAA 17960
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || ||||||||||| | || ||||| | ||| | || ||||| ||
Sbjct 17959 TATCCAGAAGGAGTCGACTCTTCACTTGGTCCTCCGTCTCCGTGGTGGTAT 17909
Score = 84.2 bits (92), Expect = 2e-11
Identities = 145/211 (69%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || || ||||| ||||| ||| |||| ||| | || ||||| ||
Sbjct 18823 CATGCAGATCTTCGTCAAGACTCTTACCGGAAAGACTATCACTTTGGAGGTGGAGAGCTC 18764
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|| | || || | ||||| || || ||||| || ||||| || || || |||||
Sbjct 18763 TGATACAATCGACAACGTCAAGGCTAAGATACAAGATAAGGAAGGGATCCCTCCGGATCA 18704
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | | || | || || || || ||||| || | ||| || | ||||| ||
Sbjct 18703 GCAGAGGCTGATCTTTGCGGGAAAGCAGTTGGAGGATGGGAGGACTCTTGCTGATTATAA 18644
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTT 27197
|| || ||||||||||| | ||| | |||
Sbjct 18643 TATACAGAAGGAGTCGACTCTGCATCTCGTT 18613
>seq11485
Length=6519
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || || ||||| || | ||||| ||||||||||| ||
Sbjct 4934 ATGCAGATTTTCGTCAAGACACTCACCGGTAAAACCATTACCCTTGAAGTGGAGAGCTCT 4993
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| |||| || | || ||| || ||||| ||||| |||||||| || || || ||
Sbjct 4994 GACACGATCGACAATGTGAAAGCGAAGATTCAGGACAAGGAAGGCATCCCTCCGGACCAG 5053
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | ||| || ||||| | || || || ||| | | |||||||||
Sbjct 5054 CAGAGACTCATCTTCGCTGGGAAACAGCTCGAGGATGGTCGGACTTTGGCTGATTACAAC 5113
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| || |||||||| || | || |||||| | ||| | || |||||
Sbjct 5114 ATCCAGAAGGAGTCTACTCTTCACTTGGTTCTTCGTCTTCGTGGTGG 5160
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || ||||| || ||||||||| | || ||||| || || || |||
Sbjct 4478 ATGCAAATTTTCGTGAAAACACTCACCGGCAAGACCATCACTCTCGAGGTCGAGAGCTCC 4537
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| ||| || || ||||| |||||||| || ||||| ||
Sbjct 4538 GACACTATAGACAATGTCAAGGCAAAGATCCAGGACAAGGAAGGCATCCCTCCCGACCAG 4597
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | ||| || || || | |||||| | ||| | |||||||||||
Sbjct 4598 CAGAGGCTCATCTTCGCTGGGAAGCAGCTAGAAGACGGACGCACCCTGGCCGATTACAAC 4657
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||| || | ||| | || | ||| | || ||||| ||
Sbjct 4658 ATCCAGAAGGAGTCAACTCTCCATCTCGTACTTCGTCTCCGTGGTGGTAT 4707
>seq25552
Length=2169
Score = 109 bits (120), Expect = 5e-19
Identities = 117/155 (75%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || ||||| || || |||||| | || ||||| ||||| || | |||
Sbjct 245 ATGCAGATCTTCGTGAAAACCCTAACGGGCAAGACCATCACTCTCGAAGTCGAGTCCTCC 304
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | |||||| || || |||||||||||||| || || || |||||
Sbjct 305 GACACCATCGACAATGTCAAAGCCAAGATCCAAGACAAAGAAGGTATCCCTCCGGATCAG 364
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGA 27142
|||||| | || | |||||| ||||| | |||||
Sbjct 365 CAGCGTCTGATCTTCGCCGGTAAACAGCTCGAAGA 399
>seq964
Length=27231
Score = 105 bits (116), Expect = 6e-18
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| ||||| || || || || ||||| | || ||| | || ||||| ||
Sbjct 10176 CATGCAGATTTTTGTGAAGACCCTCACTGGCAAAACCATCACTTTGGAGGTGGAGAGCTC 10235
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| |||| || | ||||| || ||||| ||||| ||||| || ||||| || ||
Sbjct 10236 TGACACGATCGATAACGTCAAGGCTAAGATTCAGGACAAGGAAGGGATCCCACCGGACCA 10295
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | | || | ||| || ||||| | || || || || || | ||||||||
Sbjct 10296 GCAGAGACTCATCTTCGCTGGGAAACAGCTTGAGGATGGTCGTACGCTTGCAGATTACAA 10355
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||||||| | || | || |||||| | || ||||| ||
Sbjct 10356 TATCCAGAAGGAGTCGACCCTTCACCTTGTGTTGCGTCTCCGTGGTGGTAT 10406
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||| || |||||||| |||||| ||||||| | ||||| || ||
Sbjct 10405 ATGCAAATCTTTGTGAAGACTCTGACAGGCAAGACTATTACCTTGGAAGTTGAGAGCTCA 10464
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | || || |||||||| ||||| ||||| || || || || |||
Sbjct 10465 GACACAATCGACAATGTGAAGGCTAAAATTCAGGACAAGGAAGGGATCCCTCCGGACCAA 10524
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | ||| || || || | || || || || || | || |||||
Sbjct 10525 CAGAGACTCATCTTCGCTGGTAAGCAGCTTGAGGATGGTCGCACGCTTGCTGACTACAAT 10584
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| || ||||||||||| | || |||||| | ||| | || |||||
Sbjct 10585 ATCCAGAAGGAGTCGACGCTTCACTTGGTTCTTCGTCTTCGTGGTGG 10631
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || |||||||| ||||||||| | || ||||| ||||| || |||
Sbjct 9493 ATGCAAATTTTCGTGAAAACTCTCACCGGCAAGACCATCACTCTCGAAGTCGAGAGCTCC 9552
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || || | ||||| || || || ||||| ||||| || || || || ||
Sbjct 9553 GATACCATCGATAACGTCAAGGCTAAGATCCAGGACAAGGAAGGTATTCCTCCGGACCAG 9612
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | |||||| ||||| | || || | ||| | ||||||||||
Sbjct 9613 CAGAGGCTCATCTTCGCCGGTAAACAGCTCGAGGATGGACGTACCTTGGCCGATTACAAT 9672
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || ||||||||||| | ||| | ||| | | ||| | ||||| ||
Sbjct 9673 ATCCAGAAGGAGTCGACTCTCCATCTCGTTCTCAGGTTGAGAGGTGGTAT 9722
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || ||| |||| || ||| | || ||||| || || || |||
Sbjct 9721 ATGCAGATCTTCGTCAAGACTTTGACGGGAAAGACCATCACTCTGGAGGTTGAGAGCTCC 9780
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | ||||| || || || ||||| || ||||| || || |||||
Sbjct 9781 GACACTATTGACAATGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCTCCGGATCAG 9840
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | || || || || |||| || || || | | || ||||||
Sbjct 9841 CAGAGGCTTATTTTTGCTGGTAAGCAGCTGGAGGATGGTCGCACGCTCGCTGACTACAAC 9900
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || ||||||||||| | || | || |||||| | || ||||| ||
Sbjct 9901 ATCCAGAAGGAGTCGACGCTTCACCTTGTCTTGCGTCTTCGTGGTGGTAT 9950
>seq37186
Length=985
Score = 104 bits (114), Expect = 2e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || ||||||||||| | |||||| | || ||||| |||
Sbjct 209 ATGCAGATTTTCGTTAAGACATTGACCGGCAAGACCATTACTTTGGAGGTGGAGAGCTCC 150
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | |||||| || || |||||||| || || || || || || ||
Sbjct 149 GACACCATTGACAATGTCAAAGCTAAGATCCAAGACAAGGAGGGTATCCCTCCGGACCAG 90
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | ||||||||| || | |||||| | || | | || ||||||
Sbjct 89 CAGAGGTTGATCTTCGCCGGCAAGCAGCTTGAAGACGGCAGAACATTGGCGGACTACAAC 30
Query 27168 ATTCAAAAGGAGTCGAC 27184
|| || |||||||| ||
Sbjct 29 ATCCAGAAGGAGTCTAC 13
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || || ||||| ||| | || ||||| || ||||| ||
Sbjct 437 ATGCAGATCTTCGTCAAGACCCTTACCGGAAAGACCATCACTCTCGAGGTGGAGAGCTCG 378
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| || ||||| ||||| || || || ||||| || ||
Sbjct 377 GACACCATCGATAATGTCAAGGCTAAGATTCAGGACAAGGAGGGAATCCCACCGGACCAG 318
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | |||||||| || | || | | | ||| | | || ||||||
Sbjct 317 CAGAGGTTGATCTTTGCCGGCAAGCAGCTCGAGGTCGGCAGGACTCTCGCTGACTACAAC 258
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTT 27197
|| ||||||||||| || || ||| | |||
Sbjct 257 ATCCAAAAGGAGTCAACTTTGCATCTCGTT 228
>seq24793
Length=2311
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || ||||| || || ||| | || || || || |||||| ||
Sbjct 1841 ATGCAGATTTTTGTTAAGACTCTCACGGGAAAGACAATCACCCTCGAGGTGGAAAGCTCA 1782
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | || ||| || ||||| ||||| || ||||| || || |||||
Sbjct 1781 GACACCATCGACAACGTTAAAGCCAAGATTCAGGACAAGGAGGGCATTCCCCCGGATCAG 1722
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | |||||| || || | || ||| | ||| | | |||||||||
Sbjct 1721 CAGAGGCTTATCTTCGCCGGAAAGCAGCTCGAGGACGGCAGGACTCTCGCTGATTACAAC 1662
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTT 27197
|| || |||||||||||| | ||| | |||
Sbjct 1661 ATCCAGAAGGAGTCGACCCTTCATCTTGTT 1632
>seq12662
Length=5898
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || ||||| || || ||| | || || || || |||||| ||
Sbjct 3261 ATGCAGATTTTTGTTAAGACTCTCACGGGAAAGACAATCACCCTCGAGGTGGAAAGCTCA 3320
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | || ||| || ||||| ||||| || ||||| || || |||||
Sbjct 3321 GACACCATCGACAACGTTAAAGCCAAGATTCAGGACAAGGAGGGCATTCCCCCGGATCAG 3380
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | |||||| || || | || ||| | ||| | | |||||||||
Sbjct 3381 CAGAGGCTTATCTTCGCCGGAAAGCAGCTCGAGGACGGCAGGACTCTCGCTGATTACAAC 3440
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTT 27197
|| || |||||||||||| | ||| | |||
Sbjct 3441 ATCCAGAAGGAGTCGACCCTTCATCTTGTT 3470
>seq7348
Length=9517
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||||||||| || || || |||| || ||| | || || ||||| ||||| ||
Sbjct 225 ATGCAGATATTCGTGAAGACCTTGACTGGTAAGACCATCACACTTGAGGTGGAGAGCTCT 284
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || || || || || ||||| |||||||| || || |||||
Sbjct 285 GACACCATTGACAACGTAAAGGCCAAGATCCAGGACAAGGAAGGCATCCCTCCGGATCAG 344
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | ||| || || || | || || || ||| | | || ||||||
Sbjct 345 CAGCGTCTCATCTTCGCTGGAAAGCAGCTTGAGGATGGTCGCACCTTAGCAGACTACAAC 404
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||||||| | || |||| | ||| | || ||||| ||
Sbjct 405 ATCCAGAAGGAGTCGACCCTTCACTTGGCCCTCCGTCTCCGTGGTGGTAT 454
Score = 95.1 bits (104), Expect = 1e-14
Identities = 144/205 (70%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 26992 AGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACT 27051
|||| || || || ||||| ||||||||| | || || | ||||| || ||||||
Sbjct 1 AGATCTTCGTGAAGACTCTTACCGGCAAGACCATCACATTGGAAGTTGAGAGCTCCGACA 60
Query 27052 CGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGC 27111
| ||||| | || || || || || ||||| ||||| || || || || || ||||
Sbjct 61 CCATTGACAACGTGAAGGCTAAGATCCAGGACAAGGAAGGTATCCCTCCGGACCAGCAGC 120
Query 27112 GTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTC 27171
|| | || | ||| || || || | || || || || || |||| |||||||| |
Sbjct 121 GTCTCATCTTCGCTGGAAAGCAGCTCGAGGATGGTCGCACTCTTGCCGACTACAACATCC 180
Query 27172 AAAAGGAGTCGACCTTACATTTGGT 27196
| |||||||||||| | || |||||
Sbjct 181 AGAAGGAGTCGACCCTTCACTTGGT 205
>seq806
Length=29032
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || ||||| || || || ||| | || || || || || || | |||
Sbjct 18176 ATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATAACCCTCGAGGTCGAGTCCTCC 18117
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| || || || ||||| ||||| || || || || ||
Sbjct 18116 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGGATCCCGCCGGACCAG 18057
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| | || | |||||| || || | |||||| | || | |||| ||||||
Sbjct 18056 CAGCGACTGATCTTCGCCGGGAAGCAGCTCGAAGACGGCCGCACACTCGCCGACTACAAC 17997
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215
|| || ||||||||||| | ||| | || | ||| | || ||||||
Sbjct 17996 ATCCAGAAGGAGTCGACGCTTCATCTCGTCCTCCGTCTCCGTGGTGGC 17949
>seq3737
Length=14779
Score = 93.3 bits (102), Expect = 4e-14
Identities = 141/200 (71%), Gaps = 2/200 (1%)
Strand=Plus/Minus
Query 26976 AATTTATACGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAA 27035
||||||| | ||||||||||| || || ||||| ||||| ||| | || || || ||
Sbjct 9519 AATTTATCAG--ATGCAGATATTCGTTAAGACTCTTACCGGAAAGACGATCACCCTCGAG 9462
Query 27036 GTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATA 27095
|| ||| |||||| |||| || | || | | || || || || || ||||| ||
Sbjct 9461 GTTGAAAGCTCCGACACGATCGACAACGTTACAGCCAAGATCCACGATAAGGAAGGTATC 9402
Query 27096 CCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTT 27155
|| |||||||| ||| | || || | |||||| || || | ||||| | ||| ||
Sbjct 9401 CCTCCCGATCAGCAGAGGTTGATCTTCGCCGGTAAGCAGCTCGAAGATGGCAGGACTCTT 9342
Query 27156 TCCGATTACAACATTCAAAA 27175
| ||||||||||| || ||
Sbjct 9341 GCTGATTACAACATCCACAA 9322
>seq2054
Length=20018
Score = 91.5 bits (100), Expect = 1e-13
Identities = 113/155 (73%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || ||||| || ||||| ||| | || || || || || || | |||
Sbjct 3393 ATGCAGATCTTCGTGAAAACCCTAACCGGAAAGACCATCACCCTCGAGGTCGAGTCCTCC 3334
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| || || |||||||||||||| || || || |||||
Sbjct 3333 GACACCATCGACAATGTCAAGGCCAAGATCCAAGACAAAGAAGGTATCCCTCCAGATCAG 3274
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGA 27142
||| | || || | |||||| ||||| | |||||
Sbjct 3273 CAGAGATTGATCTTCGCCGGTAAACAGCTCGAAGA 3239
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434566485776640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |