Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raphanus_20raphanistrum_20subsp._20raphanistrum_20[genbank_20GCA_5F0 00769845.1_202014-10-28] 64,732 sequences; 253,833,977 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq4396 134 1e-26 seq14782 131 1e-25 seq7912 120 3e-22 seq1703 120 3e-22 seq11485 113 4e-20 seq25552 109 5e-19 seq964 105 6e-18 seq37186 104 2e-17 seq24793 104 2e-17 seq12662 104 2e-17 seq7348 104 2e-17 seq806 96.9 3e-15 seq3737 93.3 4e-14 seq2054 91.5 1e-13 >seq4396 Length=13502 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || |||||||| ||| |||| ||| | || ||||| ||| Sbjct 12491 ATGCAGATTTTTGTTAAGACACTGACCGGGAAGACTATCACTTTGGAGGTGGAGAGCTCC 12550 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| || ||||| ||||| || || || ||||| || || Sbjct 12551 GACACCATTGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGGATCCCACCGGACCAG 12610 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||| ||||| || | || || || ||| | | ||||||||| Sbjct 12611 CAGCGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGTCGCACCTTGGCTGATTACAAC 12670 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||||| || ||||| ||| | || ||||| || ||| |||| ||||| Sbjct 12671 ATTCAGAAAGAGTCAACCCTTCACTTGGTGTTACGTCTGCGTGGTGG 12717 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||||||||| || || ||||| ||||| ||| | || || || || |||||| || Sbjct 11831 ATGCAGATATTCGTTAAGACTCTCACCGGAAAGACGATCACCCTCGAGGTGGAAAGCTCA 11890 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || ||| || ||||| ||||| |||||||| || || ||||| Sbjct 11891 GACACCATCGACAACGTTAAAGCCAAGATTCAGGACAAGGAAGGCATTCCCCCGGATCAG 11950 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | |||||| || ||| | ||||| | || | | || |||||| Sbjct 11951 CAGAGGCTTATCTTCGCCGGGAAGCAACTTGAAGATGGGCGTACTCTCGCTGACTACAAC 12010 Query 27168 ATTCAAAAGGAGTCGACCTTACAT 27191 || ||||| ||||||||| | ||| Sbjct 12011 ATCCAAAAAGAGTCGACCCTTCAT 12034 >seq14782 Length=4961 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || ||||| || || || ||| | || || || || || ||| | ||| Sbjct 2195 ATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATAACCCTAGAGGTCGAATCATCC 2136 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | ||||| || ||||| ||||| ||||| || ||||| || || Sbjct 2135 GACACGATCGACAATGTCAAGGCCAAGATTCAGGACAAGGAAGGGATCCCACCGGACCAG 2076 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | |||||| || || |||||||| | |||| | | ||||||||| Sbjct 2075 CAGCGTCTGATCTTCGCCGGGAAGCAGCTGGAAGACGGAAGGACCCTCGCGGATTACAAC 2016 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || ||||||||||| | || ||||| | ||| || | || || Sbjct 2015 ATCCAGAAGGAGTCGACTCTTCACCTGGTTCTCCGTCTGAGAGGAGG 1969 >seq7912 Length=9007 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| ||||| || ||| |||| || ||| | |||||| | || || || || Sbjct 6563 CATGCAGATCTTTGTCAAGACTTTGACTGGAAAGACCATTACTTTGGAGGTTGAGAGCTC 6504 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| | ||||| | ||||| || || |||||||| || || || || || || || Sbjct 6503 CGACACCATTGACAACGTCAAGGCCAAGATCCAAGACAAGGAGGGTATCCCTCCGGACCA 6444 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | | || | ||| || ||||| | || || || ||| | |||| ||||| Sbjct 6443 GCAGAGGCTCATCTTCGCTGGGAAACAGCTTGAGGATGGTCGCACCTTAGCCGACTACAA 6384 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| ||||||||||| || | || ||||| |||||| |||| || ||||| Sbjct 6383 CATCCAAAAGGAGTCCACACTTCACTTGGTGTTGCGTCTGCGTGGAGGCAT 6333 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||| || || ||| | || || || || |||||| ||| Sbjct 6790 ATGCAGATCTTCGTTAAGACTCTCACGGGAAAGACCATCACCCTCGAGGTGGAAAGCTCC 6731 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | |||||| || ||||| ||||| ||||| || || |||||||| Sbjct 6730 GACACAATCGACAACGTCAAAGCCAAGATTCAGGACAAGGAAGGTATCCCTCCCGATCAG 6671 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | ||||||||| || | |||||| | || | | || |||||| Sbjct 6670 CAGAGGCTCATCTTCGCCGGCAAGCAGCTCGAAGACGGCAGAACATTGGCAGACTACAAC 6611 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||||||||| || | ||| | ||| | | | || |||||||| Sbjct 6610 ATCCAAAAGGAGTCTACGCTTCATCTCGTTCTCAGGCTTCGTGGTGGCAT 6561 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| ||||| || || || ||||||||| | || || | || ||||| || Sbjct 6335 CATGCAGATCTTTGTCAAGACACTTACCGGCAAGACCATCACGTTGGAGGTGGAGAGCTC 6276 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | ||||| | ||||| || || || || || ||||| || || || || || Sbjct 6275 TGACACCATTGACAATGTCAAGGCCAAGATCCAGGATAAGGAAGGTATCCCTCCGGACCA 6216 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||||| | || | ||| ||||| || | || || || ||| | |||| ||||| Sbjct 6215 GCAGCGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGTCGCACCTTAGCCGACTACAA 6156 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || ||||||||||| || | || ||||| |||||| | || ||||| Sbjct 6155 TATCCAAAAGGAGTCCACACTTCACTTGGTGTTGCGTCTTCGTGGTGG 6108 >seq1703 Length=21771 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || || || |||| || ||| | || ||| | || ||||| || Sbjct 18367 CATGCAGATCTTCGTTAAGACGTTGACAGGAAAGACGATCACTTTAGAGGTGGAGAGTTC 18308 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| | ||||| | || ||| ||||| ||||||||||| || || || || || || Sbjct 18307 CGACACCATTGACAACGTGAAAGCGAAAATCCAAGACAAAGAGGGTATCCCTCCGGACCA 18248 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | | |||| ||| || || || | || || || ||| | | |||||||| Sbjct 18247 GCAGAGGCTGATATTCGCTGGGAAGCAGCTCGAGGATGGTCGCACCTTGGCTGATTACAA 18188 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||| || ||||||||| | || ||||| || ||| | || |||||||| Sbjct 18187 CATTCAGAAAGAGTCGACCCTTCACTTGGTGTTACGTCTCCGTGGTGGCAT 18137 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| ||||| || ||||| ||||| ||| |||| || | || || || || Sbjct 18139 CATGCAGATCTTTGTCAAGACTCTTACCGGGAAGACTATCACATTGGAGGTTGAGAGCTC 18080 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | ||||| | || || || || || ||||| ||||| || || || ||||| Sbjct 18079 TGACACTATTGACAACGTGAAGGCTAAGATCCAGGACAAGGAAGGTATCCCTCCGGATCA 18020 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||||| | || | ||| || || || | || || || ||| | | || ||||| Sbjct 18019 GCAGCGTCTCATCTTCGCTGGAAAGCAGCTCGAGGATGGTCGCACCTTGGCAGACTACAA 17960 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||||||||| | || ||||| | ||| | || ||||| || Sbjct 17959 TATCCAGAAGGAGTCGACTCTTCACTTGGTCCTCCGTCTCCGTGGTGGTAT 17909 Score = 84.2 bits (92), Expect = 2e-11 Identities = 145/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || || ||||| ||||| ||| |||| ||| | || ||||| || Sbjct 18823 CATGCAGATCTTCGTCAAGACTCTTACCGGAAAGACTATCACTTTGGAGGTGGAGAGCTC 18764 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 || | || || | ||||| || || ||||| || ||||| || || || ||||| Sbjct 18763 TGATACAATCGACAACGTCAAGGCTAAGATACAAGATAAGGAAGGGATCCCTCCGGATCA 18704 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | | || | || || || || ||||| || | ||| || | ||||| || Sbjct 18703 GCAGAGGCTGATCTTTGCGGGAAAGCAGTTGGAGGATGGGAGGACTCTTGCTGATTATAA 18644 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTT 27197 || || ||||||||||| | ||| | ||| Sbjct 18643 TATACAGAAGGAGTCGACTCTGCATCTCGTT 18613 >seq11485 Length=6519 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || ||||| || | ||||| ||||||||||| || Sbjct 4934 ATGCAGATTTTCGTCAAGACACTCACCGGTAAAACCATTACCCTTGAAGTGGAGAGCTCT 4993 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | || ||| || ||||| ||||| |||||||| || || || || Sbjct 4994 GACACGATCGACAATGTGAAAGCGAAGATTCAGGACAAGGAAGGCATCCCTCCGGACCAG 5053 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | ||| || ||||| | || || || ||| | | ||||||||| Sbjct 5054 CAGAGACTCATCTTCGCTGGGAAACAGCTCGAGGATGGTCGGACTTTGGCTGATTACAAC 5113 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || |||||||| || | || |||||| | ||| | || ||||| Sbjct 5114 ATCCAGAAGGAGTCTACTCTTCACTTGGTTCTTCGTCTTCGTGGTGG 5160 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || ||||| || ||||||||| | || ||||| || || || ||| Sbjct 4478 ATGCAAATTTTCGTGAAAACACTCACCGGCAAGACCATCACTCTCGAGGTCGAGAGCTCC 4537 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| ||| || || ||||| |||||||| || ||||| || Sbjct 4538 GACACTATAGACAATGTCAAGGCAAAGATCCAGGACAAGGAAGGCATCCCTCCCGACCAG 4597 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | ||| || || || | |||||| | ||| | ||||||||||| Sbjct 4598 CAGAGGCTCATCTTCGCTGGGAAGCAGCTAGAAGACGGACGCACCCTGGCCGATTACAAC 4657 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||| || | ||| | || | ||| | || ||||| || Sbjct 4658 ATCCAGAAGGAGTCAACTCTCCATCTCGTACTTCGTCTCCGTGGTGGTAT 4707 >seq25552 Length=2169 Score = 109 bits (120), Expect = 5e-19 Identities = 117/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || ||||| || || |||||| | || ||||| ||||| || | ||| Sbjct 245 ATGCAGATCTTCGTGAAAACCCTAACGGGCAAGACCATCACTCTCGAAGTCGAGTCCTCC 304 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | |||||| || || |||||||||||||| || || || ||||| Sbjct 305 GACACCATCGACAATGTCAAAGCCAAGATCCAAGACAAAGAAGGTATCCCTCCGGATCAG 364 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGA 27142 |||||| | || | |||||| ||||| | ||||| Sbjct 365 CAGCGTCTGATCTTCGCCGGTAAACAGCTCGAAGA 399 >seq964 Length=27231 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| ||||| || || || || ||||| | || ||| | || ||||| || Sbjct 10176 CATGCAGATTTTTGTGAAGACCCTCACTGGCAAAACCATCACTTTGGAGGTGGAGAGCTC 10235 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| |||| || | ||||| || ||||| ||||| ||||| || ||||| || || Sbjct 10236 TGACACGATCGATAACGTCAAGGCTAAGATTCAGGACAAGGAAGGGATCCCACCGGACCA 10295 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | | || | ||| || ||||| | || || || || || | |||||||| Sbjct 10296 GCAGAGACTCATCTTCGCTGGGAAACAGCTTGAGGATGGTCGTACGCTTGCAGATTACAA 10355 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||||||| | || | || |||||| | || ||||| || Sbjct 10356 TATCCAGAAGGAGTCGACCCTTCACCTTGTGTTGCGTCTCCGTGGTGGTAT 10406 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || |||||||| |||||| ||||||| | ||||| || || Sbjct 10405 ATGCAAATCTTTGTGAAGACTCTGACAGGCAAGACTATTACCTTGGAAGTTGAGAGCTCA 10464 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || |||||||| ||||| ||||| || || || || ||| Sbjct 10465 GACACAATCGACAATGTGAAGGCTAAAATTCAGGACAAGGAAGGGATCCCTCCGGACCAA 10524 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | ||| || || || | || || || || || | || ||||| Sbjct 10525 CAGAGACTCATCTTCGCTGGTAAGCAGCTTGAGGATGGTCGCACGCTTGCTGACTACAAT 10584 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || ||||||||||| | || |||||| | ||| | || ||||| Sbjct 10585 ATCCAGAAGGAGTCGACGCTTCACTTGGTTCTTCGTCTTCGTGGTGG 10631 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || |||||||| ||||||||| | || ||||| ||||| || ||| Sbjct 9493 ATGCAAATTTTCGTGAAAACTCTCACCGGCAAGACCATCACTCTCGAAGTCGAGAGCTCC 9552 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | ||||| || || || ||||| ||||| || || || || || Sbjct 9553 GATACCATCGATAACGTCAAGGCTAAGATCCAGGACAAGGAAGGTATTCCTCCGGACCAG 9612 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | |||||| ||||| | || || | ||| | |||||||||| Sbjct 9613 CAGAGGCTCATCTTCGCCGGTAAACAGCTCGAGGATGGACGTACCTTGGCCGATTACAAT 9672 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||||||||| | ||| | ||| | | ||| | ||||| || Sbjct 9673 ATCCAGAAGGAGTCGACTCTCCATCTCGTTCTCAGGTTGAGAGGTGGTAT 9722 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||| |||| || ||| | || ||||| || || || ||| Sbjct 9721 ATGCAGATCTTCGTCAAGACTTTGACGGGAAAGACCATCACTCTGGAGGTTGAGAGCTCC 9780 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| || || || ||||| || ||||| || || ||||| Sbjct 9781 GACACTATTGACAATGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCTCCGGATCAG 9840 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || || || || |||| || || || | | || |||||| Sbjct 9841 CAGAGGCTTATTTTTGCTGGTAAGCAGCTGGAGGATGGTCGCACGCTCGCTGACTACAAC 9900 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||||||||| | || | || |||||| | || ||||| || Sbjct 9901 ATCCAGAAGGAGTCGACGCTTCACCTTGTCTTGCGTCTTCGTGGTGGTAT 9950 >seq37186 Length=985 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || ||||||||||| | |||||| | || ||||| ||| Sbjct 209 ATGCAGATTTTCGTTAAGACATTGACCGGCAAGACCATTACTTTGGAGGTGGAGAGCTCC 150 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | |||||| || || |||||||| || || || || || || || Sbjct 149 GACACCATTGACAATGTCAAAGCTAAGATCCAAGACAAGGAGGGTATCCCTCCGGACCAG 90 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | ||||||||| || | |||||| | || | | || |||||| Sbjct 89 CAGAGGTTGATCTTCGCCGGCAAGCAGCTTGAAGACGGCAGAACATTGGCGGACTACAAC 30 Query 27168 ATTCAAAAGGAGTCGAC 27184 || || |||||||| || Sbjct 29 ATCCAGAAGGAGTCTAC 13 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || ||||| ||| | || ||||| || ||||| || Sbjct 437 ATGCAGATCTTCGTCAAGACCCTTACCGGAAAGACCATCACTCTCGAGGTGGAGAGCTCG 378 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || ||||| ||||| || || || ||||| || || Sbjct 377 GACACCATCGATAATGTCAAGGCTAAGATTCAGGACAAGGAGGGAATCCCACCGGACCAG 318 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | |||||||| || | || | | | ||| | | || |||||| Sbjct 317 CAGAGGTTGATCTTTGCCGGCAAGCAGCTCGAGGTCGGCAGGACTCTCGCTGACTACAAC 258 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTT 27197 || ||||||||||| || || ||| | ||| Sbjct 257 ATCCAAAAGGAGTCAACTTTGCATCTCGTT 228 >seq24793 Length=2311 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || ||||| || || ||| | || || || || |||||| || Sbjct 1841 ATGCAGATTTTTGTTAAGACTCTCACGGGAAAGACAATCACCCTCGAGGTGGAAAGCTCA 1782 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || ||| || ||||| ||||| || ||||| || || ||||| Sbjct 1781 GACACCATCGACAACGTTAAAGCCAAGATTCAGGACAAGGAGGGCATTCCCCCGGATCAG 1722 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | |||||| || || | || ||| | ||| | | ||||||||| Sbjct 1721 CAGAGGCTTATCTTCGCCGGAAAGCAGCTCGAGGACGGCAGGACTCTCGCTGATTACAAC 1662 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTT 27197 || || |||||||||||| | ||| | ||| Sbjct 1661 ATCCAGAAGGAGTCGACCCTTCATCTTGTT 1632 >seq12662 Length=5898 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || ||||| || || ||| | || || || || |||||| || Sbjct 3261 ATGCAGATTTTTGTTAAGACTCTCACGGGAAAGACAATCACCCTCGAGGTGGAAAGCTCA 3320 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || ||| || ||||| ||||| || ||||| || || ||||| Sbjct 3321 GACACCATCGACAACGTTAAAGCCAAGATTCAGGACAAGGAGGGCATTCCCCCGGATCAG 3380 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | |||||| || || | || ||| | ||| | | ||||||||| Sbjct 3381 CAGAGGCTTATCTTCGCCGGAAAGCAGCTCGAGGACGGCAGGACTCTCGCTGATTACAAC 3440 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTT 27197 || || |||||||||||| | ||| | ||| Sbjct 3441 ATCCAGAAGGAGTCGACCCTTCATCTTGTT 3470 >seq7348 Length=9517 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||||||||| || || || |||| || ||| | || || ||||| ||||| || Sbjct 225 ATGCAGATATTCGTGAAGACCTTGACTGGTAAGACCATCACACTTGAGGTGGAGAGCTCT 284 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || || || || || ||||| |||||||| || || ||||| Sbjct 285 GACACCATTGACAACGTAAAGGCCAAGATCCAGGACAAGGAAGGCATCCCTCCGGATCAG 344 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||| || || || | || || || ||| | | || |||||| Sbjct 345 CAGCGTCTCATCTTCGCTGGAAAGCAGCTTGAGGATGGTCGCACCTTAGCAGACTACAAC 404 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||||||| | || |||| | ||| | || ||||| || Sbjct 405 ATCCAGAAGGAGTCGACCCTTCACTTGGCCCTCCGTCTCCGTGGTGGTAT 454 Score = 95.1 bits (104), Expect = 1e-14 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 26992 AGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACT 27051 |||| || || || ||||| ||||||||| | || || | ||||| || |||||| Sbjct 1 AGATCTTCGTGAAGACTCTTACCGGCAAGACCATCACATTGGAAGTTGAGAGCTCCGACA 60 Query 27052 CGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGC 27111 | ||||| | || || || || || ||||| ||||| || || || || || |||| Sbjct 61 CCATTGACAACGTGAAGGCTAAGATCCAGGACAAGGAAGGTATCCCTCCGGACCAGCAGC 120 Query 27112 GTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTC 27171 || | || | ||| || || || | || || || || || |||| |||||||| | Sbjct 121 GTCTCATCTTCGCTGGAAAGCAGCTCGAGGATGGTCGCACTCTTGCCGACTACAACATCC 180 Query 27172 AAAAGGAGTCGACCTTACATTTGGT 27196 | |||||||||||| | || ||||| Sbjct 181 AGAAGGAGTCGACCCTTCACTTGGT 205 >seq806 Length=29032 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || ||||| || || || ||| | || || || || || || | ||| Sbjct 18176 ATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATAACCCTCGAGGTCGAGTCCTCC 18117 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || || || ||||| ||||| || || || || || Sbjct 18116 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGGATCCCGCCGGACCAG 18057 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | |||||| || || | |||||| | || | |||| |||||| Sbjct 18056 CAGCGACTGATCTTCGCCGGGAAGCAGCTCGAAGACGGCCGCACACTCGCCGACTACAAC 17997 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 || || ||||||||||| | ||| | || | ||| | || |||||| Sbjct 17996 ATCCAGAAGGAGTCGACGCTTCATCTCGTCCTCCGTCTCCGTGGTGGC 17949 >seq3737 Length=14779 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/200 (71%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 26976 AATTTATACGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAA 27035 ||||||| | ||||||||||| || || ||||| ||||| ||| | || || || || Sbjct 9519 AATTTATCAG--ATGCAGATATTCGTTAAGACTCTTACCGGAAAGACGATCACCCTCGAG 9462 Query 27036 GTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATA 27095 || ||| |||||| |||| || | || | | || || || || || ||||| || Sbjct 9461 GTTGAAAGCTCCGACACGATCGACAACGTTACAGCCAAGATCCACGATAAGGAAGGTATC 9402 Query 27096 CCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTT 27155 || |||||||| ||| | || || | |||||| || || | ||||| | ||| || Sbjct 9401 CCTCCCGATCAGCAGAGGTTGATCTTCGCCGGTAAGCAGCTCGAAGATGGCAGGACTCTT 9342 Query 27156 TCCGATTACAACATTCAAAA 27175 | ||||||||||| || || Sbjct 9341 GCTGATTACAACATCCACAA 9322 >seq2054 Length=20018 Score = 91.5 bits (100), Expect = 1e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || ||||| || ||||| ||| | || || || || || || | ||| Sbjct 3393 ATGCAGATCTTCGTGAAAACCCTAACCGGAAAGACCATCACCCTCGAGGTCGAGTCCTCC 3334 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || || |||||||||||||| || || || ||||| Sbjct 3333 GACACCATCGACAATGTCAAGGCCAAGATCCAAGACAAAGAAGGTATCCCTCCAGATCAG 3274 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGA 27142 ||| | || || | |||||| ||||| | ||||| Sbjct 3273 CAGAGATTGATCTTCGCCGGTAAACAGCTCGAAGA 3239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434566485776640