Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raphanus_20raphanistrum_20subsp._20raphanistrum_20[genbank_20GCA_5F0 00769845.1_202014-10-28] 64,732 sequences; 253,833,977 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq806 159 3e-34 seq1703 132 4e-26 seq4396 129 5e-25 seq24793 122 8e-23 seq12662 122 8e-23 seq23940 118 1e-21 seq6096 118 1e-21 seq11485 107 2e-18 seq37186 105 6e-18 seq7912 105 6e-18 seq7348 96.9 3e-15 seq964 96.9 3e-15 seq20570 93.3 4e-14 >seq806 Length=29032 Score = 159 bits (176), Expect = 3e-34 Identities = 179/234 (76%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693 |||| || || ||||| | || ||||| ||||| ||||||||| ||||| ||||||| Sbjct 17948 CGCCACCACGGAGACGGAGGACGAGATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGG 18007 Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCC-GCG 41752 ||| ||||| |||| ||||||||||| |||||||| ||||| ||||| |||||| ||| Sbjct 18008 CGAGTGTGCGGCCGTCTTCGAGCTGCTTCCCGGCGAAGATCAGTCGCTGCTGGTCCGGCG 18067 Query 41753 GGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTC 41811 ||| | || ||||||||| || | || || | ||| | | | |||||| ||||| Sbjct 18068 GGATCCCT-TCCTTGTCC-TGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGACTC 18125 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 ||||| | |||||||| || ||||| || || || ||||| |||||||| || Sbjct 18126 GACCTCGAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 18179 >seq1703 Length=21771 Score = 132 bits (146), Expect = 4e-26 Identities = 169/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||||||||||| || || || ||| ||||||||||| || || | Sbjct 18139 GCCACCACGGAGACGTAACACCAAGTGAAGGGTCGACTCTTTCTGAATGTTGTAATCAGC 18198 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 | |||||| | || ||||||||||| || ||||||||||| | ||| ||||||| || Sbjct 18199 CAAGGTGCGACCATCCTCGAGCTGCTTCCCAGCGAATATCAGCCTCTGCTGGTCCGGAGG 18258 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | | ||| |||| | || |||| |||| ||| | | | |||||| ||||| Sbjct 18259 GATACCCTCTTTGT-CTTGGATTTTCGCTTTCACGTTGTCAATGGTGTCGGAACTCTCCA 18317 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||| | || ||||| || || |||| |||||| ||||| ||||||||| Sbjct 18318 CCTCTAAAGTGATCGTCTTTCCTGTCAACGTCTTAACGAAGATCTGCATG 18367 Score = 109 bits (120), Expect = 5e-19 Identities = 167/233 (72%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || |||||||| || |||| || ||||| ||||||||| || || || |||| Sbjct 18823 GCCTCCACGTAGACGCAAGACCAAGTGAAGCGTAGACTCCTTCTGGATATTGTAATCGGC 18882 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCC-GCGG 41753 | |||||| | || ||||||||||| |||||||| || || ||||| || ||| | || Sbjct 18883 CAAGGTGCGACCATCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGAGG 18942 Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCC 41812 || | || ||||||||| || | || |||| ||| | | | |||||| ||| Sbjct 18943 GATCCCT-TCCTTGTCC-TGGATCTTGGCTTTCACGTTGTCGATGGTGTCGGAGCTTTCC 19000 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 ||||| | || || || || || || || || || ||||| || ||||| || Sbjct 19001 ACCTCGAGGGTGATTGTCTTCCCGGTGAGAGTTTTCACGAAGATTTGCATCTT 19053 Score = 96.9 bits (106), Expect = 3e-15 Identities = 163/232 (70%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| || || || ||||||||| || || ||||| | Sbjct 17912 CCACCACGGAGACGGAGGACCAAGTGAAGAGTCGACTCCTTCTGGATATTGTAGTCTGCC 17971 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | |||||| | || ||||||||||| || ||||| || || ||||| || |||| || Sbjct 17972 AAGGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCCGGAGGG 18031 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTC 41811 | | ||||||||| ||| || |||| ||| | | | |||||| ||| ||| Sbjct 18032 ATACCTTCCTTGTCCTGGATCTTAGCCTTC-ACGTTGTCAATAGTGTCAGAGCT---CTC 18087 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||||| || || || || || || || ||||| || || ||||||||| Sbjct 18088 AACCTCCAATGTGATAGTCTTCCCGGTAAGAGTCTTGACAAAGATCTGCATG 18139 Score = 86.0 bits (94), Expect = 6e-12 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || |||||||| || |||| || ||||| || ||||| ||||| ||||| | Sbjct 18367 GCCTCCACGTAGACGCAAGACCAAGTGAAGCGTAGATTCTTTCTGGATGTTGTAGTCAGC 18426 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC-GG 41753 || || | | | || || | |||||| ||||| || |||| | ||| ||||| | || Sbjct 18427 AAGAGTCCTCCCATCCTCCAACTGCTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGTGG 18486 Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACAC-AGTGTCGCTCGACTCC 41812 || | || ||||| ||| ||| | || || | || | || ||| ||| |||| Sbjct 18487 GATCCCT-TCCTTATCC-TGAATCTTAGCCTTGACATTGTCAATAGTATCGGAGCTCTCC 18544 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||||| || || || || || |||| ||||| || || |||||||| Sbjct 18545 ACCTCCAAAGTAATAGTCTTTCCAGTCAAAGTCTTGACAAAGATCTGCAT 18594 >seq4396 Length=13502 Score = 129 bits (142), Expect = 5e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||||||||||| || || || ||| ||||||||||| || || | Sbjct 12717 CCACCACGCAGACGTAACACCAAGTGAAGGGTTGACTCTTTCTGAATGTTGTAATCAGCC 12658 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | |||||| | || || ||||||||||| ||||| || || ||||| ||||||| || Sbjct 12657 AAGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGG 12598 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| ||| | || || | ||| | | | |||||| |||||| Sbjct 12597 ATCCCCTCCTTGTCC-TGAATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCCAC 12539 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| || || || || || ||||| ||||| || ||||||||||| Sbjct 12538 CTCCAAAGTGATAGTCTTCCCGGTCAGTGTCTTAACAAAAATCTGCAT 12491 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| ||||||| || || || ||||||||| ||||||||||| | Sbjct 328 CCTCCACGCAGACGCAACACCAAGTGAAGTGTAGACTCCTTCTGGATGTTATAGTCAGCC 269 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | |||||| | || |||||||||||||| ||||| || || ||||| ||||||| || Sbjct 268 AAGGTGCGACCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGG 209 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| ||| | || || | ||| | | | |||||| ||| || Sbjct 208 ATTCCCTCCTTGTCC-TGAATCTTAGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCAAC 150 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | || || || || || || || ||||| || || |||||||| Sbjct 149 TTCGAGGGTGATTGTCTTTCCGGTTAGTGTCTTGACAAAGATCTGCAT 102 Score = 95.1 bits (104), Expect = 1e-14 Identities = 164/232 (71%), Gaps = 10/232 (4%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| || |||| || || || ||||||||| || || ||||| | | Sbjct 556 CCACCACGCAGACGCAAGACCAAGTGAAGTGTAGACTCCTTCTGGATATTGTAGTCAGCG 497 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC-CGCGGG 41754 || || | |||| ||||||||||| || ||||| || || ||||| ||||| | ||| Sbjct 496 AGAGTCCTGCCGTCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGG 437 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACT 41810 | | || ||||| | | || | || |||| ||| | | ||||| ||| || Sbjct 436 ATCCCT-TCCTTAT-CTTGGATCTTGGCTTTCACGTTATCAATCGTGTCCGAGCT---CT 382 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||||||| || || || ||||| |||| ||||| ||||| || ||||| Sbjct 381 CCACCTCCAGTGTGATGGTCTTACCAGTCAAGGTCTTGACGAAGATTTGCAT 330 >seq24793 Length=2311 Score = 122 bits (134), Expect = 8e-23 Identities = 157/213 (74%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 || ||||| || || ||||||||| ||||| || || | ||| || | |||| ||| Sbjct 1633 ACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAATCAGCGAGAGTCCTGCCGTCCTCG 1692 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 |||||||| |||||||| || || | ||| || |||| ||||| || |||||||||| || Sbjct 1693 AGCTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGGGGAATGCCCTCCTTGTCC-TG 1751 Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTCCACCTCCACCGTTATCGT 41829 | | || |||| |||| | | | ||||| ||| |||||||| | || || || Sbjct 1752 AATCTTGGCTTTAACGTTGTCGATGGTGTCTGAGCT---TTCCACCTCGAGGGTGATTGT 1808 Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || ||||| || ||||| || ||||||||||| Sbjct 1809 CTTTCCCGTGAGAGTCTTAACAAAAATCTGCAT 1841 Score = 114 bits (126), Expect = 1e-20 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 || |||||||| || ||||||||| ||||| ||||| | | || | |||| || Sbjct 1405 ACGAGATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCCGCCAATGTTCTGCCGTCTTCA 1464 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||||||||||||||| |||| | ||| ||||||| || | | |||||||| | || Sbjct 1465 AGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATACCCTCCTTGT-CTTG 1523 Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832 | ||||||| ||| | | | |||||| ||||||||| | || ||||| || Sbjct 1524 GATCTTTGCTTTGACGTTGTCGATGGTGTCGGAGCTCTCCACCTCTAGGGTAATCGTCTT 1583 Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||||| ||||| ||||| |||||||| Sbjct 1584 TCCCGTCAAGGTCTTAACGAAGATCTGCAT 1613 >seq12662 Length=5898 Score = 122 bits (134), Expect = 8e-23 Identities = 157/213 (74%), Gaps = 8/213 (4%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 || ||||| || || ||||||||| ||||| || || | ||| || | |||| ||| Sbjct 3469 ACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAATCAGCGAGAGTCCTGCCGTCCTCG 3410 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 |||||||| |||||||| || || | ||| || |||| ||||| || |||||||||| || Sbjct 3409 AGCTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGGGGAATGCCCTCCTTGTCC-TG 3351 Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTCCACCTCCACCGTTATCGT 41829 | | || |||| |||| | | | ||||| ||| |||||||| | || || || Sbjct 3350 AATCTTGGCTTTAACGTTGTCGATGGTGTCTGAGCT---TTCCACCTCGAGGGTGATTGT 3294 Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || ||||| || ||||| || ||||||||||| Sbjct 3293 CTTTCCCGTGAGAGTCTTAACAAAAATCTGCAT 3261 Score = 120 bits (132), Expect = 3e-22 Identities = 154/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 || |||||||| || ||||||||| ||||| ||||| | ||| || | |||| || Sbjct 3697 ACGAGATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCAGCGAGAGTTCTGCCGTCTTCA 3638 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||||||||| ||||| |||| | ||| ||||||| || | | |||||||| | || Sbjct 3637 AGCTGCTTGCCTGCGAAGATCAACCTCTGCTGGTCCGGTGGGATCCCCTCCTTGT-CTTG 3579 Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832 | ||||||| ||| | | | |||||| ||||||||| | || ||||| || Sbjct 3578 GATCTTTGCTTTGACGTTGTCGATGGTGTCGGAGCTCTCCACCTCTAGGGTAATCGTCTT 3519 Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||||| ||||| ||||| |||||||| Sbjct 3518 TCCCGTCAAGGTCTTAACGAAGATCTGCAT 3489 >seq23940 Length=2465 Score = 118 bits (130), Expect = 1e-21 Identities = 101/125 (81%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | ||||| || ||||| ||||||||| ||||| ||||||| ||||||||| Sbjct 2310 AGACGGAGAACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGT 2369 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 |||| ||||||||||| |||||||| || |||||||| ||||||| || | || ||| Sbjct 2370 CCGTCCTCGAGCTGCTTTCCGGCGAAAATGAGGCGCTGCTGGTCCGGAGGGATGCCTTCC 2429 Query 41765 TTGTC 41769 ||||| Sbjct 2430 TTGTC 2434 >seq6096 Length=10951 Score = 118 bits (130), Expect = 1e-21 Identities = 101/125 (81%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | ||||| || ||||| ||||||||| ||||| ||||||| ||||||||| Sbjct 10784 AGACGGAGAACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGT 10843 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 |||| ||||||||||| |||||||| || |||||||| ||||||| || | || ||| Sbjct 10844 CCGTCCTCGAGCTGCTTTCCGGCGAAAATGAGGCGCTGCTGGTCCGGAGGGATGCCTTCC 10903 Query 41765 TTGTC 41769 ||||| Sbjct 10904 TTGTC 10908 >seq11485 Length=6519 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || ||||| ||||| |||||||||||| || || || | Sbjct 4932 CCACCACGGAGACGGAGGACGAGATGAAGCGTAGACTCCTTCTGAATATTGTAATCCGCA 4873 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || ||||| || || ||||| || || | ||| ||||||| ||| Sbjct 4872 AGCGTGCGTCCATCCTCAAGCTGTTTACCAGCGAAGATGAGTCTCTGCTGGTCCGGAGGA 4813 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | ||||||||| || | ||||||| || | | | ||||||| ||| || Sbjct 4812 ATTCCTTCCTTGTCC-TGGATCTTTGCTTTCACATTGTCAATAGTGTCGGAGCTCTCAAC 4754 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| || || || || || |||| ||||| || ||||||||||| Sbjct 4753 CTCCAAAGTGATGGTCTTGCCTGTCAAAGTCTTGACAAAAATCTGCAT 4706 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| || || || ||||||||| ||||| || || | Sbjct 5160 CCACCACGAAGACGAAGAACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCAGCC 5101 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | || || | || |||||||| || || ||||| || || | ||| ||||||| || Sbjct 5100 AAAGTCCGACCATCCTCGAGCTGTTTCCCAGCGAAGATGAGTCTCTGCTGGTCCGGAGGG 5041 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTC 41811 | || ||||||||| ||| | || |||| || | | | ||||| |||| || Sbjct 5040 ATGCCTTCCTTGTCC-TGAATCTTCGCTTTCACATTGTCGATCGTGTCAGAGCTC---TC 4985 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| || | || || |||||||| || || ||||| |||||||||||||| Sbjct 4984 CACTTCAAGGGTAATGGTTTTACCGGTGAGTGTCTTGACGAAAATCTGCAT 4934 >seq37186 Length=985 Score = 105 bits (116), Expect = 6e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 || |||||||| || ||||||||| ||||| ||||| | | || | |||| || Sbjct 1 ACGAGATGCAGAGTAGACTCCTTCTGGATGTTGTAGTCCGCCAATGTTCTGCCGTCTTCA 60 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||||||||||||||| |||| | ||| ||||||| || | | |||||||| | || Sbjct 61 AGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATACCCTCCTTGT-CTTG 119 Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832 | || |||| || | | | |||||| ||||||||||| || || || || Sbjct 120 GATCTTAGCTTTGACATTGTCAATGGTGTCGGAGCTCTCCACCTCCAAAGTAATGGTCTT 179 Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || |||| ||||| |||||||||||||| Sbjct 180 GCCGGTCAATGTCTTAACGAAAATCTGCAT 209 Score = 89.7 bits (98), Expect = 5e-13 Identities = 150/213 (70%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 || ||||||| || |||||| || ||||| ||||| | ||| || | || | ||| Sbjct 229 ACGAGATGCAAAGTTGACTCCTTTTGGATGTTGTAGTCAGCGAGAGTCCTGCCGACCTCG 288 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 |||||||||||||| || |||| | ||| ||||||| || | | |||||||||| || Sbjct 289 AGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGGATTCCCTCCTTGTCC-TG 347 Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTCCACCTCCACCGTTATCGT 41829 | | || || | || | | ||||| ||| ||||||||| | || || || Sbjct 348 AATCTTAGCCTTGACATTATCGATGGTGTCCGAGCT---CTCCACCTCGAGAGTGATGGT 404 Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || || || ||||| ||||| |||||||| Sbjct 405 CTTTCCGGTAAGGGTCTTGACGAAGATCTGCAT 437 >seq7912 Length=9007 Score = 105 bits (116), Expect = 6e-18 Identities = 165/232 (71%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| ||||||| || || ||| |||||| || || || ||||||| Sbjct 6108 CCACCACGAAGACGCAACACCAAGTGAAGTGTGGACTCCTTTTGGATATTGTAGTCGGCT 6167 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | |||||| | || || ||||||||||| ||||| || || ||||| ||||||| || Sbjct 6168 AAGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 6227 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTC 41811 | | ||||| ||| || | || || | || | | | ||||| ||| ||| Sbjct 6228 ATACCTTCCTTATCC-TGGATCTTGGCCTTGACATTGTCAATGGTGTCAGAGCT---CTC 6283 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||||||| ||| || || || || || || ||||| || || ||||||||| Sbjct 6284 CACCTCCAACGTGATGGTCTTGCCGGTAAGTGTCTTGACAAAGATCTGCATG 6335 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 || ||||| ||||| |||||| || ||||| ||||| | | || | |||| ||| Sbjct 6582 ACGAGATGAAGCGTAGACTCCTTTTGGATGTTGTAGTCTGCCAATGTTCTGCCGTCTTCG 6641 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||||||||||||||| || || | ||| || || | || | | ||||||||| || Sbjct 6642 AGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGATCGGGAGGGATACCTTCCTTGTCC-TG 6700 Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832 | | || |||| ||| | | | |||||| |||||||| | || || || || Sbjct 6701 AATCTTGGCTTTGACGTTGTCGATTGTGTCGGAGCTTTCCACCTCGAGGGTGATGGTCTT 6760 Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| || ||||| ||||| |||||||| Sbjct 6761 TCCCGTGAGAGTCTTAACGAAGATCTGCAT 6790 >seq7348 Length=9517 Score = 96.9 bits (106), Expect = 3e-15 Identities = 147/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 ||||| || || || ||||||||| ||||| ||||||| || ||||| | || || Sbjct 206 CACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCAAGAGTGCGACCATCCTC 147 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772 ||||||||| || ||||| || || ||||| ||||||| || | | ||||||||| Sbjct 146 GAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTGTCCTG 87 Query 41773 GATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831 ||| || |||| ||| | | | |||||| ||| || |||| || || || | Sbjct 86 GATCTTAGCCTTC-ACGTTGTCAATGGTGTCGGAGCTCTCAACTTCCAATGTGATGGTCT 28 Query 41832 TACCCGTCAGCGTCTTTACGAAAATCT 41858 | || || || ||||| ||||| |||| Sbjct 27 TGCCGGTAAGAGTCTTCACGAAGATCT 1 >seq964 Length=27231 Score = 96.9 bits (106), Expect = 3e-15 Identities = 157/222 (71%), Gaps = 8/222 (4%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 || || | ||| ||||||||||| ||| ||||||||||| ||||| | || ||||| Sbjct 10166 AGTCGAAGCACAAGATGCAGCGTAGACTCTTTCTGAATGTTGTAGTCAGCTAGCGTGCGT 10107 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || || |||||||| ||||| || || || | ||| ||||||| || | | ||| Sbjct 10106 CCATCCTCCAGCTGCTTACCGGCAAAGATGAGCCTCTGCTGGTCCGGTGGGATACCCTCT 10047 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTCCACCTCCAC 41820 || ||| || | || || | ||| | | | ||||| ||| ||| ||||||| Sbjct 10046 TTATCC-TGGATCTTAGCCTTGACGTTGTCAATGGTGTCTGAGCT---CTCAACCTCCAA 9991 Query 41821 CGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || |||||||| || || ||||| || || || ||||| Sbjct 9990 AGTGATGGTTTTACCGGTGAGGGTCTTGACAAAGATTTGCAT 9949 Score = 96.9 bits (106), Expect = 3e-15 Identities = 165/233 (71%), Gaps = 10/233 (4%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| ||||| || || || || ||||||||| || || || || | Sbjct 10403 CCACCACGGAGACGCAACACAAGGTGAAGGGTCGACTCCTTCTGGATATTGTAATCTGCA 10344 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC-GGG 41754 || || || | || || ||||| || || ||||| || || | ||| ||||||| ||| Sbjct 10343 AGCGTACGACCATCCTCAAGCTGTTTCCCAGCGAAGATGAGTCTCTGCTGGTCCGGTGGG 10284 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACT 41810 | | || ||||||||| ||| | || || | ||| | | ||||| |||| | Sbjct 10283 ATCCCT-TCCTTGTCC-TGAATCTTAGCCTTGACGTTATCGATCGTGTCAGAGCTC---T 10229 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||||||| || || ||||| || || || ||||| || |||||||||||| Sbjct 10228 CCACCTCCAAAGTGATGGTTTTGCCAGTGAGGGTCTTCACAAAAATCTGCATG 10176 Score = 95.1 bits (104), Expect = 1e-14 Identities = 164/232 (71%), Gaps = 10/232 (4%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| || ||||| ||||||||| || || ||||| | Sbjct 10631 CCACCACGAAGACGAAGAACCAAGTGAAGCGTCGACTCCTTCTGGATATTGTAGTCAGCA 10572 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCC-GCGGG 41754 || ||||| | || || |||||||| || ||||| || || | |||||||||| | ||| Sbjct 10571 AGCGTGCGACCATCCTCAAGCTGCTTACCAGCGAAGATGAGTCTCTGTTGGTCCGGAGGG 10512 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACT 41810 | | || ||||||||| ||| |||| || | || | | | ||||| ||| || Sbjct 10511 ATCCCT-TCCTTGTCC-TGAATTTTAGCCTTCACATTGTCGATTGTGTCTGAGCT---CT 10457 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | || |||| || || || || || ||||| ||||| || || || ||||| Sbjct 10456 CAACTTCCAAGGTAATAGTCTTGCCTGTCAGAGTCTTCACAAAGATTTGCAT 10405 >seq20570 Length=3172 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 || ||||||| || ||||||||| ||||| ||||| | || || | | || ||| Sbjct 82 ACGAGATGCAAAGTTGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTCCTTCCATCCTCG 141 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 || ||||||||||| || |||| | ||| ||||| | || | | |||||| ||| || Sbjct 142 AGTTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGTGGGATCCCCTCCTTATCC-TG 200 Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832 | || || | |||| | | | ||||||| ||||||||||| || || || || Sbjct 201 GATCTTAGCCTTAACGTTGTCAATAGTGTCGGAGCTCTCCACCTCCAAAGTGATTGTCTT 260 Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || |||| ||||| || || |||||||| Sbjct 261 TCCGGTCAATGTCTTGACAAAGATCTGCAT 290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 461929926718400