Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raphanus_20sativus_20[refseq_20GCF_5F000801105.1_202015-09-29] 10,676 sequences; 426,614,037 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq7 113 4e-20 seq3 113 4e-20 seq9 107 2e-18 seq4 105 6e-18 seq3342 104 2e-17 seq5 98.7 8e-16 seq6 87.8 2e-12 >seq7 Length=27187321 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||| || |||||| || | ||| | ||| |||||||| || ||||| ||||| ||| Sbjct 640344 CCACCTCTCAACCTGAGAACGAGATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCC 640403 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | ||| | | ||||| |||||||| || || | || || |||||||||||| || Sbjct 640404 AAGGTACGTCCATCCTCGAGCTGTTTACCGGCGAAGATGAGCCTCTGCTGGTCCGGAGGA 640463 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| |||||| || || | ||| || || | ||| | Sbjct 640464 ATACCTTCCTTGTCCTGGATCTTAGCCTTGACGTTATCGATGGTGTCGGAGCTCTCGACT 640523 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || |||||||||||||| | ||||| || || |||||||| Sbjct 640524 TCGAGAGTGATGGTCTTGCCGGTGAGAGTTTTCACGAAAATTTGCAT 640570 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | ||| | || |||||||| || ||||| ||||| || Sbjct 17979925 CCACCACGGAGACGGAGGACGAGATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 17979984 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || |||| ||||||||||| || || | || |||| |||||||||| || Sbjct 17979985 AGTGTGCGGCCGTCTTCCAGCTGTTTCCCGGCGAAGATCAGTCGCTGCTGGTCCGGTGGG 17980044 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| |||||| ||| || | | ||| || || | || Sbjct 17980045 ATTCCTTCCTTGTCCTGGATCTTGGCTTTGACATTGTCGATGGTGTCGGATGATTCGACC 17980104 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178 || | ||| || ||||| || |||| ||||| || || || ||||| || Sbjct 17980105 TCGAGGGTGATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 17980154 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | ||| | || |||||||| || ||||| ||||| || Sbjct 18014051 CCACCGCGGAGACGGAGGACGAGATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 18014110 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || |||| ||||||||||| || || | || |||| |||||||||| || Sbjct 18014111 AGGGTGCGGCCGTCTTCCAGCTGTTTCCCGGCGAAGATCAGTCGCTGCTGGTCCGGTGGG 18014170 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| |||||| || || | | ||| || || | || Sbjct 18014171 ATTCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGATGATTCGACC 18014230 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178 || | ||| || ||||| || |||| ||||| || || || ||||| || Sbjct 18014231 TCGAGGGTGATTGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 18014280 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || |||||||| || ||||| ||||| || || || | | ||||||||||| || || Sbjct 640146 GTCGACTCCTTCTGGATGTTGTAGTCAGCGAGCGTGCGACCATCCTCCAGCTGCTTACCA 640205 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| ||||||| |||||||| ||| || | |||||||||||| ||||| || Sbjct 640206 GCAAAAATAAGCCTCTGCTGATCCGGAGGGATGCCTTCCTTGTCCTGTATCTTCGCCTTG 640265 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | | | ||| || | ||| || | || |||||||| || || || || Sbjct 640266 ACATTGTCAATAGTGTCGGAGCTCTCAACCTCGAGAGTGATGGTCTTTCCCGTCAAAGTC 640325 Query 21159 TTGACAAATATTTGCAT 21175 ||||| || || ||||| Sbjct 640326 TTGACGAAGATCTGCAT 640342 >seq3 Length=29132933 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || |||||||| || | ||||||||| |||||||| |||||||| ||||| || Sbjct 2324345 CCACCACGAAGCCTGAGGACGAGATGCAAAGTTGACTCCTTCTGAATGTTGTAGTCAGCA 2324404 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | ||||| ||||| ||||| ||| | || | |||||||||||| || Sbjct 2324405 AGAGTCCTTCCATCCTCGAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGG 2324464 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || ||||| || |||||| || || | | | | ||| || | |||| Sbjct 2324465 ATACCCTCCTTATCCTGGATCTTAGCCTTAACGTTGTCAATAGTGTCGGAGCTCTCCACC 2324524 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| || || ||||| ||||| || || |||||||| || ||||| Sbjct 2324525 TCCAAAGTGATAGTCTTTCCGGTCAATGTCTTGACAAAGATCTGCAT 2324571 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | || | ||| |||||||| || ||||| ||||| || Sbjct 11118389 CCACCGCGGAGACGGAGGACGAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCG 11118448 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | ||||||||||||| || || || | || |||| |||||||||| || Sbjct 11118449 AGGGTGCGCCCGTCCTCCAGCTGCTTTCCGGCGAAGATCAGTCGCTGCTGGTCCGGAGGG 11118508 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| |||||| || || | | ||| || || || ||| Sbjct 11118509 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAGGACTCGACC 11118568 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178 || | ||| || ||||| || |||| ||||| || || || ||||| || Sbjct 11118569 TCGAGGGTGATTGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 11118618 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| |||| || | || |||||||| || ||||| || || ||| Sbjct 16258398 CCACCACGAAGACGGAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCAGCC 16258457 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | ||| | | ||||| ||||| || || || | || || | |||||||||| || Sbjct 16258458 AAGGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 16258517 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| |||||| ||| || | | | | |||||| | |||| Sbjct 16258518 ATGCCTTCCTTGTCCTGGATCTTGGCTTTGACATTGTCAATAGTATCCGAGCTCTCCACC 16258577 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||||| ||||| || || || || |||||||| || ||||| Sbjct 16258578 TCCAAAGTAATAGTCTTTCCAGTCAAAGTCTTGACAAAGATCTGCAT 16258624 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || |||||||| || | ||| | || |||||||| || ||||| ||||| ||| Sbjct 9516892 CCACCACGAAGCCTGAGAACGAGATGAAGCGTAGACTCCTTCTGGATGTTGTAGTCGGCC 9516833 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | ||| | |||| || ||||| ||||| || | || || |||||||| ||| || Sbjct 9516832 AATGTTCTGCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGATCCGGAGGG 9516773 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| |||||| ||| || | | ||| || || | ||| Sbjct 9516772 ATACCTTCCTTGTCCTGGATCTTGGCTTTGACGTTGTCGATGGTGTCGGAGCTTTCCACC 9516713 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| |||||||| || || | || || || || || ||||| Sbjct 9516712 TCGAGGGTGATGGTCTTTCCCGTGAGAGTCTTAACGAAGATCTGCAT 9516666 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | | ||||| || | || ||||| || || |||||||| || ||| Sbjct 9517120 CCTCCACGCAGACGCAACACCAAGTGAAGCGTAGACTCTTTCTGGATGTTATAATCAGCC 9517061 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | ||| ||||||| ||||| || || || | || | ||||||||||||| || Sbjct 9517060 AATGTTCTACCGTCCTCAAGCTGCTTTCCAGCGAATATCAATCTCTGCTGGTCCGGAGGG 9517001 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| |||||| || || | | ||| || || | ||| Sbjct 9517000 ATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCCCTCAACC 9516941 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||||||||||| ||||| || || |||||||| || ||||| Sbjct 9516940 TCCAAAGTAATGGTCTTTCCGGTCAAAGTCTTGACAAAGATCTGCAT 9516894 Score = 93.3 bits (102), Expect = 4e-14 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || ||||| ||||||| || | || |||||||| || ||||| ||||| ||| Sbjct 2324115 CCACCACGAAGCCTTAGCACCAAGTGAAGTGTTGACTCCTTCTGGATGTTGTAGTCAGCC 2324174 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | ||| | | ||||| ||||| || || || | || || | |||||||||| || Sbjct 2324175 AAGGTGCGACCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 2324234 Query 21069 ACGCCTTCCTTGTCGGCGATCT--TTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | |||||||||||| ||||| || | | | | ||| || | |||| Sbjct 2324235 ATGCCTTCCTTGTCCTGGATCTNNNNNNNNNNACGTTGTCAATAGTGTCGGAGCTCTCCA 2324294 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| || || ||||| ||||| || || |||||||| || ||||| Sbjct 2324295 CCTCCAAAGTGATAGTCTTTCCGGTCAAAGTCTTGACAAAAATCTGCAT 2324343 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || |||||||| || | ||||| ||| |||||||| ||||| |||||||| || Sbjct 16258626 CCACCACGAAGCCTGAGAACGAGATGCAGAGTCGACTCCTTCTGAATATTATAGTCAGCA 16258685 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | ||||| ||||| || || ||| | || || |||||||||||| || Sbjct 16258686 AGAGTCCTCCCATCCTCAAGCTGCTTCCCGGCAAAGATCAGCCTCTGCTGGTCCGGTGGG 16258745 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || ||||| || ||||| || || | ||| || || | |||| Sbjct 16258746 ATCCCCTCCTTATCTTGTATCTTAGCCTTGACGTTATCGATGGTGTCGGAGCTCTCCACC 16258805 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| || || ||||| ||||| | || ||||| || || ||||| Sbjct 16258806 TCCAAAGTGATAGTCTTTCCGGTAAGAGTCTTGACGAAGATCTGCAT 16258852 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| |||| || | || |||||||| || ||||| ||||| || Sbjct 2316313 CCACCACGGAGACGGAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCTGCT 2316372 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | ||| | | ||||| ||||| || || || | || || | |||||| ||| || Sbjct 2316373 AAGGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCCGGAGGG 2316432 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| ||||| ||||| | | | | || ||| | |||| Sbjct 2316433 ATGCCTTCCTTGTCCTGAATCTTGGCCTTCACGTTGTCAATGGTGTCAGAGCTCTCCACC 2316492 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || |||||||| ||||| || || || ||||| || ||||| Sbjct 2316493 TCAAGTGTGATGGTCTTACCGGTCAAGGTCTTCACAAAAATCTGCAT 2316539 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| |||| || | || |||||||| || ||||| ||||| || Sbjct 2323887 CCACCACGGAGACGGAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCTGCT 2323946 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | ||| | | ||||| ||||| || || || | || || | |||||| ||| || Sbjct 2323947 AAGGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCCGGAGGG 2324006 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| ||||| ||||| | | | | || ||| | |||| Sbjct 2324007 ATGCCTTCCTTGTCCTGAATCTTGGCCTTCACGTTGTCAATGGTGTCAGAGCTCTCCACC 2324066 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || |||||||| ||||| || || || ||||| || ||||| Sbjct 2324067 TCAAGTGTGATGGTCTTACCGGTCAAGGTCTTCACAAAAATCTGCAT 2324113 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/201 (69%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || |||||||| || ||||| ||||| |||| |||| | | ||||| ||||| || || Sbjct 16258884 GTAGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTTCGACCATCCTCGAGCTGCTTTCCG 16258943 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || || | |||||| ||| || | ||||||||||| |||||| |||| Sbjct 16258944 GCGAAGATGAGACGCTGCTGATCCGGAGGGATCCCTTCCTTGTCCTGGATCTTGGCTTTC 16259003 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| || || | ||| || | ||| || ||||| || || | ||| Sbjct 16259004 ACGTTGTCGATGGTGTCGGAGCTTTCCACCTCGAGGGTGATTGTCTTTCCCGTGAGAGTT 16259063 Query 21159 TTGACAAATATTTGCATTTTG 21179 || || || || ||||| ||| Sbjct 16259064 TTCACGAAGATCTGCATCTTG 16259084 >seq9 Length=38354807 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || |||||||| || | ||||||||| ||||||||||| ||||| ||||| || Sbjct 21303378 CCACCACGGAGCCTGAGAACGAGATGCAAAGTTGACTCCTTTTGGATGTTGTAGTCAGCG 21303437 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | |||| || ||||| ||||| || | || | |||||||||||| || Sbjct 21303438 AGAGTCCTGCCGTCTTCAAGCTGCTTGCCTGCGAAGATCAACCTCTGCTGGTCCGGTGGG 21303497 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| |||||| ||| || | | ||| || || | ||| Sbjct 21303498 ATCCCCTCCTTGTCCTGGATCTTAGCTTTAACGTTGTCGATGGTGTCTGAGCTTTCCACC 21303557 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| || ||||| ||||| | || || || || |||||||| Sbjct 21303558 TCGAGGGTGATCGTCTTTCCGGTGAGAGTCTTAACGAAGATTTGCAT 21303604 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || |||||||| |||| || | ||||||||||| || ||||| ||||| || Sbjct 21327831 CCACCACGGAGCCTGAGAACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCG 21327890 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || ||| | |||| || ||||| ||||| ||| | || | |||||||||||| || Sbjct 21327891 AGAGTTCTGCCGTCTTCAAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGG 21327950 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| ||||||| |||||| | | | | || || | |||| Sbjct 21327951 ATCCCCTCCTTGTCCTGGATCTTTGCTTTCACGTTGTCAATGGTGTCGGAGCTCTCCACC 21328010 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | |||||| || || || || || || || || || || ||||| Sbjct 21328011 TCTAGGGTAATAGTTTTTCCCGTCAAGGTCTTAACGAAGATCTGCAT 21328057 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || |||||||| || ||||| ||||| |||| || | | || |||| ||| ||||| Sbjct 21327633 GTAGACTCCTTCTGGATGTTGTAGTCAGCCAAAGTGCGACCATCTTCCAACTGCTTGCCG 21327692 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| | || | ||||||||||||| || | || ||||| || |||||| ||| Sbjct 21327693 GCAAAGATCAATCTCTGCTGGTCCGGTGGGATCCCCTCCTTATCTTGGATCTTAGCTTTA 21327752 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | | | || || | |||| |||| || |||||||| ||||| ||||| Sbjct 21327753 ACGTTGTCAATGGTGTCGGAGCTCTCCACCTCCAAAGTGATGGTCTTTCCGGTCAACGTC 21327812 Query 21159 TTGACAAATATTTGCAT 21175 |||||||| || ||||| Sbjct 21327813 TTGACAAAGATCTGCAT 21327829 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | | ||||| || | || ||||||||||| || || ||||| || Sbjct 21303150 CCTCCACGCAGACGCAACACCAAGTGAAGTGTAGACTCCTTTTGGATATTGTAGTCAGCG 21303209 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | ||||||| ||||| || || ||| | || | ||||||||||| || Sbjct 21303210 AGAGTCCTGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCTGGAGGG 21303269 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| |||||| ||| || | | | || || | |||| Sbjct 21303270 ATACCCTCCTTGTCTTGGATCTTAGCTTTGACATTATCAATGGTGTCGGAGCTCTCCACC 21303329 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||||||||||||||||| || || || || || || ||||| Sbjct 21303330 TCCAAAGTAATGGTCTTGCCGGTCAATGTCTTAACGAAAATCTGCAT 21303376 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | | ||||| || | || ||||||||||| || || ||||| || Sbjct 21327147 CCTCCACGCAGACGCAACACCAAGTGAAGTGTAGACTCCTTTTGGATATTGTAGTCAGCG 21327206 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | ||||||| ||||| || || ||| | || | ||||||||||| || Sbjct 21327207 AGAGTCCTGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCTGGAGGG 21327266 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| |||||| ||| || | | | || || | ||| | Sbjct 21327267 ATACCCTCCTTGTCTTGGATCTTAGCTTTGACATTATCAATGGTGTCGGAGCTCTCAACT 21327326 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| || ||||| ||||||| || |||||||| || ||||| Sbjct 21327327 TCGAGGGTGATTGTCTTTCCGGTTAGTGTCTTGACAAAGATCTGCAT 21327373 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 20966 CACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTC 21025 ||||| || | || |||||||| || ||||| ||||| || ||||| | | ||||| Sbjct 21302939 CACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTGCGACCATCCTC 21302998 Query 21026 CAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGC 21085 ||||| || || || | || || | |||||| || || | ||||||||||| Sbjct 21302999 AAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCTGGAGGGATCCCTTCCTTGTCTTG 21303058 Query 21086 GATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTT 21145 |||||| |||||| | | | || || | |||| |||| || |||||||| Sbjct 21303059 GATCTTGGCTTTCACATTATCAATGGTGTCCGAGCTCTCCACCTCCAGTGTGATGGTCTT 21303118 Query 21146 GCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || || || || ||||| || |||||||| Sbjct 21303119 ACCAGTCAAGGTCTTGACGAAGATTTGCAT 21303148 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 20966 CACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTC 21025 ||||| || | || |||||||| || ||||| ||||| || ||||| | | ||||| Sbjct 21326936 CACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTGCGACCATCCTC 21326995 Query 21026 CAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGC 21085 ||||| || || || | || || | |||||| || || | ||||||||||| Sbjct 21326996 AAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCTGGAGGGATCCCTTCCTTGTCTTG 21327055 Query 21086 GATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTT 21145 |||||| |||||| | | | || || | |||| |||| || |||||||| Sbjct 21327056 GATCTTGGCTTTCACGTTATCAATGGTGTCCGAGCTCTCCACCTCCAGTGTGATGGTCTT 21327115 Query 21146 GCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || || || || |||||||| || ||||| Sbjct 21327116 ACCAGTCAAGGTCTTGACAAAGATCTGCAT 21327145 >seq4 Length=50002108 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 20948 TCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGC 21007 ||| |||| ||| | ||| |||| || | || |||||||| || ||||| ||||| || Sbjct 49702187 TCCTCCTCTCAGACGGAGAACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 49702128 Query 21008 CAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGG 21067 ||||| | ||||||| ||||| || || || |||| || | |||||||||| || Sbjct 49702127 GAGGGTGCGTCCGTCCTCGAGCTGCTTTCCGGCGAAAATGAGGCGCTGCTGGTCCGGAGG 49702068 Query 21068 CACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGT 21127 | |||||||||||| |||||| || || | | ||| || || || ||| Sbjct 49702067 GATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGACTCGAC 49702008 Query 21128 TTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| || ||||| || |||| ||||| || || || ||||| Sbjct 49702007 CTCGAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 49701960 >seq3342 Length=4839 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | || | ||| |||||||| || ||||| ||||| || Sbjct 2566 CCACCGCGGAGACGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCG 2625 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | ||||||||||||| || || || | || |||| |||||||||| || Sbjct 2626 AGGGTGCGCCCGTCCTCCAGCTGCTTCCCGGCGAAGATCAGTCGCTGCTGGTCCGGAGGG 2685 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| |||||| || || | | ||| || || || ||| Sbjct 2686 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAGGACTCGACC 2745 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178 || | ||| || ||||| || |||| ||||| || || || ||||| || Sbjct 2746 TCGAGGGTGATTGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 2795 >seq5 Length=45943323 Score = 98.7 bits (108), Expect = 8e-16 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 20960 CCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGC 21019 ||| || || | ||||| ||| ||||| || || ||||| ||||| |||| ||| | | Sbjct 16837819 CCTCAGAACAAGATGCAGAGTCGACTCTTTCTGGATGTTGTAGTCAGCCAAGGTGCGACC 16837878 Query 21020 GTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTT 21079 ||||| |||||||| || | | || | |||||||| ||| || | ||||| || Sbjct 16837879 ATCCTCAAGCTGTTTTCCGGTGAAGATCAACCTCTGCTGATCCGATGGGATTCCTTCTTT 16837938 Query 21080 GTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAAT 21139 ||| |||||| || || | | ||| || |||| | |||| || | ||| || Sbjct 16837939 GTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCACTGCTCTCCACCTCGAGGGTGAT 16837998 Query 21140 GGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178 ||||||||| || | ||||| || ||||| ||||| || Sbjct 16837999 GGTCTTGCCCGTCAGTGTTTTCACGAATATCTGCATCTT 16838037 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | ||| | || |||||||| || ||||| ||||| || Sbjct 32128068 CCACCACGGAGACGGAGGACGAGATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 32128009 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || |||| |||||||| || || || | || |||| |||||||||| || Sbjct 32128008 AGAGTGCGGCCGTCTTCCAGCTGCTTCCCGGCGAATATCAGTCGCTGCTGGTCCGGAGGG 32127949 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| |||||| || || | | ||| || || || ||| Sbjct 32127948 ATCCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGACTCGACC 32127889 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178 || | ||| || ||||| || |||| ||||| || || || ||||| || Sbjct 32127888 TCGAGGGTTATCGTCTTACCCGTTAGGGTTTTCACGAAGATCTGCATCTT 32127839 >seq6 Length=53636577 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 20948 TCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGC 21007 ||| |||| ||| | |||||||| || | || |||||||| || ||||| |||||||| Sbjct 30640176 TCCTCCTCTCAGGCGGAGCACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCCGC 30640117 Query 21008 CAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGG 21067 || || |||| || ||||| || || || | || || | |||||||||| || Sbjct 30640116 GAGCGTCCTCCCGTCTTCGAGCTGCTTCCCGGCGAAGATCAGACGCTGCTGGTCCGGTGG 30640057 Query 21068 CACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGT 21127 | ||||||||||| ||||| || || | | ||| || || | || Sbjct 30640056 GATCCCTTCCTTGTCCTGAATCTTGGCCTTGACATTGTCGATCGTGTCGGATGATTCGAC 30639997 Query 21128 TTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178 || | ||| || ||||| || |||| ||||| ||||| || |||||||| Sbjct 30639996 CTCTAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCATTTT 30639946 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422204258272016