Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raphanus_20sativus_20[refseq_20GCF_5F000801105.1_202015-09-29] 10,676 sequences; 426,614,037 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq3 114 8e-21 seq3342 109 4e-19 seq7 107 1e-18 seq6 104 2e-17 seq4 102 5e-17 seq5 98.7 6e-16 seq1946 95.1 8e-15 seq9 86.0 4e-12 >seq3 Length=29132933 Score = 114 bits (126), Expect = 8e-21 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || || ||||| | |||| || ||||| ||||||||||||| Sbjct 11118389 CCACCGCGGAGACGGAGGACGAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCG 11118448 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || |||| |||| |||||| || ||||| || || ||||||||||| || Sbjct 11118449 AGGGTGCGCCCGTCCTCCAGCTGCTTTCCGGCGAAGATCAGTCGCTGCTGGTCCGGAGGG 11118508 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || |||||||| ||||| ||| | || | | || | |||| || ||||| Sbjct 11118509 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAGGACTCGACC 11118568 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | ||||| || || || || || |||||||| |||||||||||| Sbjct 11118569 TCGAGGGTGATTGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATC 11118616 Score = 98.7 bits (108), Expect = 6e-16 Identities = 164/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || ||||| || || || || | ||| || ||||| ||||||||||||| | Sbjct 9516892 CCACCACGAAGCCTGAGAACGAGATGAAGCGTAGACTCCTTCTGGATGTTGTAGTCGGCC 9516833 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC--GACGG 34280 | | | |||| || | ||||||||| ||||| ||||||| |||||| || || || Sbjct 9516832 AATGTTCTGCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGATCCGGAGGG 9516773 Query 34281 GCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCG 34339 || || |||||||| ||| || ||||| | | | | || | |||| ||| Sbjct 9516772 ATAC-CT-TCCTTGTCCTGGATC-TTGGCTTTGACGTTGTCGATGGTGTCGGAGCTTTCC 9516716 Query 34340 ACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || || | |||||||| || || |||||||| || || |||||||||||| Sbjct 9516715 ACCTCGAGGGTGATGGTCTTTCCCGTGAGAGTCTTAACGAAGATCTGCATC 9516665 Score = 96.9 bits (106), Expect = 2e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 34159 GAATCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTC 34218 ||| || || || || | || ||||| ||| | || |||||||| ||||||||||| Sbjct 9517352 GAAACCACCACGAAGACGCAACACCAAGTGAAGGGTCGACTCTTTCTGGATGTTGTAGTC 9517293 Query 34219 GGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGAC 34278 || | ||| | || || | |||||| || ||||| ||||| || |||||||| Sbjct 9517292 GGCTAAGGTACGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCCGG 9517233 Query 34279 GGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTC 34338 || | || ||||| || ||||| ||| | || | | || | || | || Sbjct 9517232 AGGAATGCCTTCCTTATCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCAGAGCTCTC 9517173 Query 34339 GACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || |||| |||||||| |||||||| || || ||||||||||||||||| Sbjct 9517172 CACCTCCAGTGTGATGGTCTTGCCGGTAAGTGTCTTCACAAAGATCTGCAT 9517122 Score = 89.7 bits (98), Expect = 3e-13 Identities = 161/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || || | || || ||||| | ||| || ||||| ||||||||||||| | Sbjct 16258854 CCTCCACGTAGACGCAAGACAAGGTGAAGCGTAGACTCCTTCTGGATGTTGTAGTCGGCC 16258913 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGT-CGACGGG 34281 | || | || || | |||||| || ||||| ||||| |||||||| | || ||| Sbjct 16258914 AAGGTTCGACCATCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGAGGG 16258973 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGA 34340 | || |||||||| ||| || ||||| | | | | || | |||| ||| | Sbjct 16258974 ATCCCT-TCCTTGTCCTGGATC-TTGGCTTTCACGTTGTCGATGGTGTCGGAGCTTTCCA 16259031 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 | || | ||||| || || || |||||||||||||| |||||||||||| Sbjct 16259032 CCTCGAGGGTGATTGTCTTTCCCGTGAGAGTTTTCACGAAGATCTGCATC 16259081 >seq3342 Length=4839 Score = 109 bits (120), Expect = 4e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || || ||||| | ||| || ||||| ||||||||||||| Sbjct 2566 CCACCGCGGAGACGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCG 2625 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || |||| |||| |||||| || ||||| || || ||||||||||| || Sbjct 2626 AGGGTGCGCCCGTCCTCCAGCTGCTTCCCGGCGAAGATCAGTCGCTGCTGGTCCGGAGGG 2685 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || |||||||| ||||| ||| | || | | || | |||| || ||||| Sbjct 2686 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAGGACTCGACC 2745 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | ||||| || || || || || |||||||| |||||||||||| Sbjct 2746 TCGAGGGTGATTGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATC 2793 >seq7 Length=27187321 Score = 107 bits (118), Expect = 1e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||||||||||| || ||| |||| |||| ||| || || ||||| Sbjct 18014087 TCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCTTCCAGCTGTTTCCCGGCGAAG 18014146 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || || ||||||||||| || | | ||||||||| ||||| ||| | || | Sbjct 18014147 ATCAGTCGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTGACATTG 18014206 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | |||| |||||||| || | ||||| || || || || || |||||||| Sbjct 18014207 TCGATGGTGTCGGATGATTCGACCTCGAGGGTGATTGTCTTCCCCGTTAGGGTTTTCACG 18014266 Query 34379 AAGATCTGCATC 34390 |||||||||||| Sbjct 18014267 AAGATCTGCATC 18014278 Score = 102 bits (112), Expect = 5e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||||||||||| || ||| |||| |||| ||| || || ||||| Sbjct 17979961 TCCTTCTGGATGTTGTAGTCGGCGAGTGTGCGGCCGTCTTCCAGCTGTTTCCCGGCGAAG 17980020 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATC 34317 || || ||||||||||| || | | |||||||| ||| || ||||| | || Sbjct 17980021 ATCAGTCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCCTGGATC-TTGGCTTTGACATT 17980079 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | | || | |||| |||||||| || | ||||| || || || || || |||||||| Sbjct 17980080 GTCGATGGTGTCGGATGATTCGACCTCGAGGGTGATCGTCTTCCCCGTTAGGGTTTTCAC 17980139 Query 34378 AAAGATCTGCATC 34390 |||||||||||| Sbjct 17980140 GAAGATCTGCATC 17980152 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || | || ||| || || || || | ||| || ||||| ||||||||||||| | Sbjct 640344 CCACCTCTCAACCTGAGAACGAGATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCC 640403 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 | ||| | || || | ||| || || ||||| ||||||| ||||||||| || Sbjct 640404 AAGGTACGTCCATCCTCGAGCTGTTTACCGGCGAAGATGAGCCTCTGCTGGTCCGGAGGA 640463 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | |||||||| ||||| ||| | | | || | |||| ||||| Sbjct 640464 ATACCTTCCTTGTCCTGGATCTTAGCCTTGACGTTATCGATGGTGTCGGAGCTCTCGACT 640523 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | |||||||| |||||||||||||||||||| || || |||||| Sbjct 640524 TCGAGAGTGATGGTCTTGCCGGTGAGAGTTTTCACGAAAATTTGCATC 640571 Score = 82.4 bits (90), Expect = 5e-11 Identities = 161/233 (69%), Gaps = 10/233 (4%) Strand=Plus/Plus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || || || | || |||| ||| | ||| || || || || |||||||| | Sbjct 639431 TCCACCACGAAGACGAAGAACCAAGTGAAGAGTCGACTCCTTTTGGATATTGTAGTCAGC 639490 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC-GACGG 34280 ||| || | || || | |||||| || ||||| ||||| | |||||| || | || Sbjct 639491 AAGCGTGCGACCATCCTCAAGCTGCTTACCGGCGAAGATGAGTCTCTGCTGATCTGGTGG 639550 Query 34281 GCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTC---GAT- 34336 | | || |||||||| ||||| ||| | || |||||| | ||| | | Sbjct 639551 GATCCCT-TCCTTGTCCTGAATCTTAGCCTTGACAT----TATCGATTGTGTCTGAGCTC 639605 Query 34337 TCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || |||| |||||||||||||||||||| || || ||||| |||||||| Sbjct 639606 TCAACCTCCAAAGTGATGGTTTTGCCGGTGAGGGTCTTAACAAAAATCTGCAT 639658 >seq6 Length=53636577 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || | ||| | ||||||| ||| | || || ||||| ||||||||||| | Sbjct 30640176 TCCTCCTCTCAGGCGGAGCACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCCGC 30640117 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC-GACGG 34280 ||| | |||| || | |||||| || ||||| || || ||||||||||| | || Sbjct 30640116 GAGCGTCCTCCCGTCTTCGAGCTGCTTCCCGGCGAAGATCAGACGCTGCTGGTCCGGTGG 30640057 Query 34281 GCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGA 34340 | | || |||||||| ||||| ||| | || | | |||| |||| ||||||| Sbjct 30640056 GATCCCT-TCCTTGTCCTGAATCTTGGCCTTGACATTGTCGATCGTGTCGGATGATTCGA 30639998 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | || | || || || || || || || |||||||||||||||||||| Sbjct 30639997 CCTCTAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCAT 30639949 >seq4 Length=50002108 Score = 102 bits (112), Expect = 5e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || | ||| | || |||||||| | || || ||||| ||||||||||||| Sbjct 49702187 TCCTCCTCTCAGACGGAGAACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 49702128 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 || || |||| || | |||||| || ||||||||||| ||||||||||| || Sbjct 49702127 GAGGGTGCGTCCGTCCTCGAGCTGCTTTCCGGCGAAAATGAGGCGCTGCTGGTCCGGAGG 49702068 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || |||||||| ||||| ||| | | | | || | |||| || ||||| Sbjct 49702067 GATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGACTCGAC 49702008 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | || || || || || || || |||||||| |||||||||||| Sbjct 49702007 CTCGAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATC 49701959 Score = 95.1 bits (104), Expect = 8e-15 Identities = 142/197 (72%), Gaps = 6/197 (3%) Strand=Plus/Minus Query 34200 CTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAA 34259 ||||||| ||||||||||| | || |||| | || || | ||| || || ||||| | Sbjct 24965451 CTTTCTGGATGTTGTAGTCAGCCAAAGTACGGCCATCTTCGAGCTGTTTACCGGCGAAGA 24965392 Query 34260 TGAGCCGCTGCTGGTC--GACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGAT 34316 | || |||||||| || || || || ||| ||||| ||||| ||||| | || Sbjct 24965391 TCAGACGCTGCTGATCCGGAGGGATACCTTCT--TTGTCTTGGATCTTG-GCTTTGACAT 24965335 Query 34317 CGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCA 34376 | | || | |||| || ||||| || | |||||||| ||||| || || ||||||| Sbjct 24965334 TGTCGATGGTGTCGGAGGACTCGACCTCGAGAGTGATGGTCTTGCCCGTTAGGGTTTTCA 24965275 Query 34377 CAAAGATCTGCATCGCT 34393 | |||||||||||| || Sbjct 24965274 CGAAGATCTGCATCTCT 24965258 Score = 86.0 bits (94), Expect = 4e-12 Identities = 136/193 (70%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 34200 CTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAA 34259 ||||||| ||||||||||| | || |||| | || || | ||| || || ||||| | Sbjct 45703485 CTTTCTGGATGTTGTAGTCAGCCAAAGTACGGCCATCCTCGAGCTGTTTACCGGCGAAGA 45703426 Query 34260 TGAGCCGCTGCTGGTC--GACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317 | | | |||||| || || || || ||| ||||| ||||| ||| | || Sbjct 45703425 TCAATCTCTGCTGATCCGGAGGGATACCTTCT--TTGTCTTGGATCTTGGCCTTGACATT 45703368 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | | || | |||| || ||||| || | |||||||| || ||||| || |||||||| Sbjct 45703367 GTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTTCCGGTTAGGGTTTTCAC 45703308 Query 34378 AAAGATCTGCATC 34390 |||||||||||| Sbjct 45703307 GAAGATCTGCATC 45703295 >seq5 Length=45943323 Score = 98.7 bits (108), Expect = 6e-16 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||||||||||| || ||| |||| |||| |||||| || ||||| Sbjct 32128032 TCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGGCCGTCTTCCAGCTGCTTCCCGGCGAAT 32127973 Query 34259 ATGAGCCGCTGCTGGTC-GACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317 || || ||||||||||| | ||| | || |||||||| ||||| ||| | | Sbjct 32127972 ATCAGTCGCTGCTGGTCCGGAGGGATCCCT-TCCTTGTCCTGGATCTTGGCCTTGACGTT 32127914 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | | || | |||| || ||||| || | || || || || || || || |||||||| Sbjct 32127913 GTCGATGGTGTCGGAGGACTCGACCTCGAGGGTTATCGTCTTACCCGTTAGGGTTTTCAC 32127854 Query 34378 AAAGATCTGCATC 34390 |||||||||||| Sbjct 32127853 GAAGATCTGCATC 32127841 >seq1946 Length=8506 Score = 95.1 bits (104), Expect = 8e-15 Identities = 140/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 34200 CTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAA 34259 ||||||| ||||||||||| | || ||| | || || | ||| || || ||||| | Sbjct 2158 CTTTCTGGATGTTGTAGTCAGCCAAAGTGCGGCCATCTTCGAGCTGTTTACCGGCGAAGA 2099 Query 34260 TGAGCCGCTGCTGGTC--GACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGAT 34316 | || |||||||| || || || || ||| ||||| ||||| ||||| | || Sbjct 2098 TCAGACGCTGCTGATCCGGAGGGATACCTTCT--TTGTCTTGGATCTTG-GCTTTGACAT 2042 Query 34317 CGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCA 34376 | | || | |||| || ||||| || | |||||||| |||||||| || ||||||| Sbjct 2041 TGTCGATGGTGTCGGAGGACTCGACCTCGAGAGTGATGGTCTTGCCGGTTAGGGTTTTCA 1982 Query 34377 CAAAGATCTGCATC 34390 | |||||||||||| Sbjct 1981 CGAAGATCTGCATC 1968 >seq9 Length=38354807 Score = 86.0 bits (94), Expect = 4e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || ||||| || || || || ||||| || || || ||||||||||| | Sbjct 21303378 CCACCACGGAGCCTGAGAACGAGATGCAAAGTTGACTCCTTTTGGATGTTGTAGTCAGCG 21303437 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || | | |||| || | ||||||||||||||| || | || ||||||||| || Sbjct 21303438 AGAGTCCTGCCGTCTTCAAGCTGCTTGCCTGCGAAGATCAACCTCTGCTGGTCCGGTGGG 21303497 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGAC 34341 | | ||||||||| ||| || ||||| | | | | || | || | ||| || Sbjct 21303498 ATCCCCTCCTTGTCCTGGATC-TTAGCTTTAACGTTGTCGATGGTGTCTGAGCTTTCCAC 21303556 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | ||||| || || ||||||||||| || || ||||| |||||| Sbjct 21303557 CTCGAGGGTGATCGTCTTTCCGGTGAGAGTCTTAACGAAGATTTGCATC 21303605 Score = 84.2 bits (92), Expect = 1e-11 Identities = 155/225 (69%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 34166 CCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACA-G 34224 |||||||| | | ||||| ||| | || |||||||| |||||||| || | || | Sbjct 21315350 CCGCGCAGACGTAACACCAAGTGAAGGGTTGACTCTTTCTGAATGTTGTAATCAGCCAAG 21315409 Query 34225 CTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCAC 34284 || || | || || | ||||||||| ||||| ||||| ||||||||||| || | Sbjct 21315410 GTG-CGACCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGGAT 21315468 Query 34285 GCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTC 34344 | ||||||||| ||||| ||| | | | | || | |||| || || || Sbjct 21315469 CCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCCACCTC 21315528 Query 34345 CACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || ||||| || || ||||| || || || | ||| |||||||| Sbjct 21315529 CAAAGTGATAGTCTTCCCGGTCAGTGTCTTAATAAAAATCTGCAT 21315573 Score = 82.4 bits (90), Expect = 5e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || ||||| || || ||||| | || || ||||| || |||||||| | | Sbjct 21328059 CCACCACGGAGCCTGAGGACGAGGTGAAGTGTCGACTCCTTCTGGATATTGTAGTCAGCC 21328118 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 | | | |||| || | |||||| || ||||| || |||| |||||| || ||| Sbjct 21328119 AAGGTTCTGCCGTCCTCGAGCTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGGGGA 21328178 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGA-TCGGCTATCGAATCGGTCGATTCGAC 34341 | || ||||||||| ||||| |||||| | | | || | || | ||| || Sbjct 21328179 ATGCCCTCCTTGTCCTGGATCTTG-GCTTTAACGTTGTCGATGGTGTCTGAGCTTTCCAC 21328237 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 || | ||||| || || ||||||||||| || || || ||||||||| Sbjct 21328238 CTCAAGGGTGATTGTCTTTCCGGTGAGAGTCTTAACGAATATCTGCATC 21328286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323029963890560