Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raphanus_20sativus_20[refseq_20GCF_5F000801105.1_202015-09-29] 10,676 sequences; 426,614,037 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq7 122 8e-23 seq5 113 4e-20 seq3 111 1e-19 seq6 104 2e-17 seq9 102 7e-17 seq3342 96.9 3e-15 seq4 95.1 1e-14 seq1 91.5 1e-13 seq1946 84.2 2e-11 >seq7 Length=27187321 Score = 122 bits (134), Expect = 8e-23 Identities = 157/217 (72%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 31188 CAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAAC 31247 |||| ||||| || ||||| || || || || || || ||||||||| |||| || ||| Sbjct 17980156 CAAAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATCACCCTCGAGGTCGAAT 17980097 Query 31248 CGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307 | ||||||| |||| | |||||| | || |||||||||||| | || || | Sbjct 17980096 CATCCGACACCATCGACAATGTCAAAGCCAAGATCCAGGACAAGGAAGGAATCCCACCGG 17980037 Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATT 31367 |||||||||| || || ||||| || |||||| |||||||| || | ||| | Sbjct 17980036 ACCAGCAGCGACTGATCTTCGCCGGGAAACAGCTGGAAGACGGCCGCACACTCGCCGACT 17979977 Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 | ||||| || || || ||||| |||||||| || || Sbjct 17979976 ACAACATCCAGAAGGAGTCGACGCTTCATCTCGTCCT 17979940 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| || || |||| ||||| || ||||| | || || ||| || Sbjct 456712 CATGCAGATCTTCGTCAAAACCTTGACCGGCAAGACCATCACTCTTGAGGTGGAAAGTTC 456771 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 | ||| | |||| | |||||| | ||| ||||||||||||| | || || ||||| Sbjct 456772 CAACACTATCGACAACGTCAAAGCCAAAATTCAGGACAAGGAAGGCATCCCACCGGACCA 456831 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || || ||||| || ||| | || || | ||| || || || || Sbjct 456832 GCAGCGTCTCATCTTTGCTGGGAAGCAGCTAGAGGATGGTCGCACTTTGGCTGACTACAA 456891 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 |||||| ||||| ||||| ||||| |||| || Sbjct 456892 CATTCAGAAAGAGTCGACCCTTCACTTGGTCCT 456924 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| || ||||| || ||||| || ||||| |||| || || ||| Sbjct 640570 ATGCAAATTTTCGTGAAAACTCTCACCGGCAAGACCATCACTCTCGAAGTCGAGAGCTCC 640511 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || |||||||||||| | || || |||||| Sbjct 640510 GACACCATCGATAACGTCAAGGCTAAGATCCAGGACAAGGAAGGTATTCCTCCGGACCAG 640451 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 ||| | || || ||||| || |||||| | || || | | | || || ||| || || Sbjct 640450 CAGAGGCTCATCTTCGCCGGTAAACAGCTCGAGGA-TGGACGTACCTTGGCCGACTACAA 640392 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| || || || |||||||| ||||| || || || |||| || || Sbjct 640391 CATCCAGAAGGAGTCGACTCTCCATCTCGTTCTCAGGTTGAGAGGTGG 640344 Score = 107 bits (118), Expect = 2e-18 Identities = 154/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 31188 CAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAAC 31247 |||| ||||| || ||||| || || || || || || || |||||| |||| || ||| Sbjct 18014282 CAAAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACAATCACCCTCGAGGTCGAAT 18014223 Query 31248 CGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307 | ||||||| |||| | ||||| | || ||||||||| || | || || | Sbjct 18014222 CATCCGACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGAATCCCACCGG 18014163 Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATT 31367 |||||||||| || || ||||| || |||||| |||||||| || | ||| | Sbjct 18014162 ACCAGCAGCGACTGATCTTCGCCGGGAAACAGCTGGAAGACGGCCGCACCCTCGCCGACT 18014103 Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 | ||||| || || || ||||| |||||||| || || Sbjct 18014102 ACAACATCCAGAAGGAGTCGACGCTTCATCTCGTCCT 18014066 Score = 104 bits (114), Expect = 2e-17 Identities = 158/220 (72%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGT-TGAACCGTC 31251 ||||| || ||||| |||||||| || | || ||||||||| |||| || | || | || Sbjct 456482 ATGCAGATATTCGTTAAGACTCTTACCTGAAAGACGATCACCCTCGAGGTGTTAAGC-TC 456540 Query 31252 CGACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310 ||||| |||| |||| | || | ||| | ||| |||||||| | || ||||| | Sbjct 456541 CGACACGATCGACAACGTTAAAGCCAAGA-TCCAGGATAAGGAAGGTATCCCTCCCGATC 456599 Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATA 31370 ||||| | | || ||||| || || ||| | ||||| | |||| | ||||| | Sbjct 456600 AGCAGAGGTTGATCTTCGCCGGTAAGCAGCTCGAAGATGGCAGGACTCTTGCTGATTACA 456659 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410 |||| || ||||| || ||||||||||| || || || || Sbjct 456660 ACATCCACAAAGAGTCCACTCTTCATCTCGTCCTCAGGCT 456699 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| |||||| |||| || || || ||||| |||| ||||| || Sbjct 640343 CATGCAGATCTTCGTCAAGACTTTGACGGGAAAGACCATCACTCTCGAGGTTGAGAGCTC 640284 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | | || | ||||| || ||| ||||||||||||| | || || || || Sbjct 640283 CGACACTATTGACAATGTCAAGGCGAAGATACAGGACAAGGAAGGCATCCCTCCGGATCA 640224 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | || || || ||||| || ||| |||| || | || | || || || Sbjct 640223 GCAGAGGCTTATTTTTGCTGGTAAGCAGCTGGAGGATGGTCGCACGCTCGCTGACTACAA 640164 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGT 31401 ||| || || || ||||| ||||| || || Sbjct 640163 CATCCAGAAGGAGTCGACGCTTCACCTTGT 640134 >seq5 Length=45943323 Score = 113 bits (124), Expect = 4e-20 Identities = 155/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 31188 CAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAAC 31247 |||| ||||| || ||||| || || || || || || ||||| ||| |||| || || Sbjct 32127837 CAAAGATGCAGATCTTCGTGAAAACCCTAACGGGTAAGACGATAACCCTCGAGGTCGAGT 32127896 Query 31248 CGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307 | ||||||| |||| | ||||| | || |||||||||||| | || || | Sbjct 32127897 CCTCCGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGGATCCCTCCGG 32127956 Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATT 31367 |||||||||| || |||||||| || || ||| |||||||| ||| | ||| | Sbjct 32127957 ACCAGCAGCGACTGATATTCGCCGGGAAGCAGCTGGAAGACGGCCGCACTCTCGCCGACT 32128016 Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 | ||||| || || || ||||| |||||||| || || Sbjct 32128017 ACAACATCCAGAAGGAGTCGACGCTTCATCTCGTCCT 32128053 >seq3 Length=29132933 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| |||||||| || || || || |||||| |||| || ||| ||| Sbjct 9516666 ATGCAGATCTTCGTTAAGACTCTCACGGGAAAGACCATCACCCTCGAGGTGGAAAGCTCC 9516725 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | |||||| | || |||||||||||| | || || || ||| Sbjct 9516726 GACACCATCGACAACGTCAAAGCCAAGATCCAGGACAAGGAAGGTATCCCTCCGGATCAG 9516785 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || ||||| ||||| ||| | |||||| | || || ||| || ||| Sbjct 9516786 CAGAGGCTCATCTTCGCCGGCAAGCAGCTCGAAGACGGCAGAACATTGGCCGACTACAAC 9516845 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || || || || || |||||||| || || || || | || |||| Sbjct 9516846 ATCCAGAAGGAGTCTACGCTTCATCTCGTTCTCAGGCTTCGTGGTGGTA 9516894 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 ||| ||||| || ||||| || || || || || || || |||||| |||| || || | Sbjct 11118619 AAAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACAATCACCCTCGAGGTCGAGTC 11118560 Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 ||||||| |||| | ||||| | || ||||||||||||| | || || || Sbjct 11118559 CTCCGACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATCCCTCCGGA 11118500 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368 ||||||||| || || ||||| || || ||| |||| ||| || | ||| || Sbjct 11118499 CCAGCAGCGACTGATCTTCGCCGGAAAGCAGCTGGAGGACGGGCGCACCCTCGCCGACTA 11118440 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || || || ||||| || || || || Sbjct 11118439 CAACATCCAGAAGGAGTCTACTCTCCACCTCGTCCT 11118404 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || |||||| |||| || || || || || | || ||||| ||| Sbjct 9516894 ATGCAGATCTTTGTCAAGACTTTGACCGGAAAGACCATTACTTTGGAGGTTGAGGGCTCC 9516953 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||||||||| || | || || |||||| Sbjct 9516954 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAG 9517013 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | | ||||||||||| || ||| | || ||| || || || ||||||||| Sbjct 9517014 CAGAGATTGATATTCGCTGGAAAGCAGCTTGAGGACGGTAGAACATTGGCTGATTATAAC 9517073 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGT 31401 || || ||||| || || ||||| |||| Sbjct 9517074 ATCCAGAAAGAGTCTACGCTTCACTTGGT 9517102 Score = 89.7 bits (98), Expect = 5e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| || ||||| || ||||| || || || || |||||| |||| || ||| Sbjct 16259083 AAGATGCAGATCTTCGTGAAAACTCTCACGGGAAAGACAATCACCCTCGAGGTGGAAAGC 16259024 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 ||||||| |||| | || ||| | || |||||||||||| | || || || Sbjct 16259023 TCCGACACCATCGACAACGTGAAAGCCAAGATCCAGGACAAGGAAGGGATCCCTCCGGAT 16258964 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 ||||||||||| || ||||| || || ||| | || || | || || ||| || Sbjct 16258963 CAGCAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAGGATGGTCGAACCTTGGCCGACTAC 16258904 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGT 31401 ||||| || || || || || ||||| || || Sbjct 16258903 AACATCCAGAAGGAGTCTACGCTTCACCTTGT 16258872 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || |||||| |||| || || || || || | || || || || Sbjct 16258624 ATGCAGATCTTTGTCAAGACTTTGACTGGAAAGACTATTACTTTGGAGGTGGAGAGCTCG 16258565 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | | || | |||||| | || ||||||||||||| | || || |||||| Sbjct 16258564 GATACTATTGACAATGTCAAAGCCAAGATCCAGGACAAGGAAGGCATCCCTCCGGACCAG 16258505 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || |||||||| || ||| | || || | || || ||||| ||| Sbjct 16258504 CAGCGTCTCATCTTCGCTGGAAAGCAGCTCGAGGATGGTCGCACCTTGGCTGATTACAAC 16258445 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || || || ||||| ||||| |||| || Sbjct 16258444 ATCCAGAAGGAGTCGACCCTTCACTTGGTCCT 16258413 >seq6 Length=53636577 Score = 104 bits (114), Expect = 2e-17 Identities = 162/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 31188 CAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAAC 31247 |||| ||||| || || || || || || || || || ||||| ||| | || || ||| Sbjct 30639944 CAAAAATGCAGATCTTTGTGAAAACCCTAACGGGGAAGACGATAACCCTAGAGGTCGAAT 30640003 Query 31248 CGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307 | ||||||| |||| | ||||| | || |||||||||||| | || || | Sbjct 30640004 CATCCGACACGATCGACAATGTCAAGGCCAAGATTCAGGACAAGGAAGGGATCCCACCGG 30640063 Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATT 31367 ||||||||||||| || ||||| || || ||| | |||||| | ||| | || | Sbjct 30640064 ACCAGCAGCGTCTGATCTTCGCCGGGAAGCAGCTCGAAGACGGGAGGACGCTCGCGGACT 30640123 Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 | ||||| || || || ||||| ||||| |||| || | ||||| || || Sbjct 30640124 ACAACATCCAGAAGGAGTCGACGCTTCACTTGGTGCTCCGCCTGAGAGGAGG 30640175 >seq9 Length=38354807 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| ||||| || || || ||||| | || || || ||| Sbjct 21327601 ATGCAGATCTTCGTTAAGACACTGACCGGGAAGACCATCACTCTGGAGGTGGAGAGTTCC 21327542 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || || | || |||||||| || | || || |||||| Sbjct 21327541 GACACCATTGACAACGTGAAGGCTAAGATCCAAGACAAGGAGGGAATCCCACCGGACCAG 21327482 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || |||||||| || ||| | || || | ||| || ||||| ||| Sbjct 21327481 CAGCGTCTCATCTTCGCTGGAAAGCAGCTCGAGGATGGTCGCACTTTGGCAGATTACAAC 21327422 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGT 31401 ||||||||||| |||||||||||| |||| Sbjct 21327421 ATTCAAAAAGAGTCGACTCTTCATTTGGT 21327393 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| |||||||| || || || || |||||| |||| || ||| || Sbjct 21316248 ATGCAGATATTCGTTAAGACTCTCACGGGAAAGACAATCACCCTCGAGGTGGAAAGCTCA 21316189 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || ||| || || ||||||||||||| | || || || | | Sbjct 21316188 GACACCATCGACAACGTTAAAGCGAAGATTCAGGACAAGGAAGGCATTCCCCCGGATCGG 21316129 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || ||||| || || || | ||||| || | || || ||| Sbjct 21316128 CAGAGGCTTATCTTCGCCGGGAAGCAACTTGAAGATGGGCGTGCTCTCGCTGACTACAAC 21316069 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || |||||||| ||||| |||||||| || || || || | || |||| Sbjct 21316068 ATCCAAAAAGAGTCGACCCTTCATCTTGTCCTCAGGCTCCGTGGTGGTA 21316020 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| ||||| | ||||| ||||| || || || ||||| | || || || ||| Sbjct 21315573 ATGCAGATTTTTATTAAGACACTGACCGGGAAGACTATCACTTTGGAGGTGGAGAGCTCC 21315514 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | ||||| | || ||||||||| || | || || |||||| Sbjct 21315513 GACACCATTGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGGATCCCACCGGACCAG 21315454 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || ||||||||||| ||| | || || | || || ||||| ||| Sbjct 21315453 CAGCGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGTCGCACCTTGGCTGATTACAAC 21315394 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGT 31401 ||||| ||||| || || ||||| |||| Sbjct 21315393 ATTCAGAAAGAGTCAACCCTTCACTTGGT 21315365 >seq3342 Length=4839 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 ||| ||||| || ||||| || || || || || || || |||||| |||| || || | Sbjct 2796 AAAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACAATCACCCTCGAGGTCGAGTC 2737 Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 ||||||| |||| | ||||| | || ||||||||||||| | || || || Sbjct 2736 CTCCGACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAAGGCATCCCTCCGGA 2677 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368 ||||||||| || || ||||| || || ||| |||| ||| || | ||| || Sbjct 2676 CCAGCAGCGACTGATCTTCGCCGGGAAGCAGCTGGAGGACGGGCGCACCCTCGCCGACTA 2617 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || || |||||||| || || || || Sbjct 2616 CAACATCCAGAAGGAGTCGACTCTCCACCTCGTCCT 2581 >seq4 Length=50002108 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| || || || || || || ||||| ||| |||| || || | ||| Sbjct 49701960 ATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATAACCCTCGAGGTCGAGTCCTCC 49702019 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || |||||||||||| | || || |||||| Sbjct 49702020 GACACCATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCGGACCAG 49702079 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || ||||| || || ||| | || ||| || | ||| || ||| Sbjct 49702080 CAGCGCCTCATTTTCGCCGGAAAGCAGCTCGAGGACGGACGCACCCTCGCCGACTACAAC 49702139 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || || || || ||||| ||||| ||||| || | ||||| || || Sbjct 49702140 ATCCAGAAGGAGTCGACGCTTCACCTGGTTCTCCGTCTGAGAGGAGG 49702186 Score = 82.4 bits (90), Expect = 7e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| || || || || ||||| || ||||| |||| || || | ||| Sbjct 24965262 ATGCAGATCTTCGTGAAAACCCTAACGGGCAAGACCATCACTCTCGAGGTCGAGTCCTCC 24965321 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | |||||| | || ||||| ||||| | || || || ||| Sbjct 24965322 GACACCATCGACAATGTCAAAGCCAAGATCCAAGACAAAGAAGGTATCCCTCCGGATCAG 24965381 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 |||||||| || ||||| || |||||| | ||||| Sbjct 24965382 CAGCGTCTGATCTTCGCCGGTAAACAGCTCGAAGA 24965416 >seq1 Length=26309735 Score = 91.5 bits (100), Expect = 1e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 31285 GGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGA 31344 |||||||||||| | ||||| ||||||||||| || || ||||| || || ||| |||| Sbjct 10591844 GGACAAGGAAGGGATCCCGCCGGACCAGCAGCGACTGATCTTCGCCGGGAAGCAGCTGGA 10591903 Query 31345 AGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| | ||| | ||||| ||||| || || || ||||| ||||| ||||| || Sbjct 10591904 GGACGGAAGGACGCTCGCGGATTACAACATCCAGAAGGAGTCGACCCTTCACCTGGTTCT 10591963 Query 31405 TAGACTGAGGGGCGG 31419 | |||||||| || Sbjct 10591964 CCGTCTGAGGGGAGG 10591978 >seq1946 Length=8506 Score = 84.2 bits (92), Expect = 2e-11 Identities = 114/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 ||| ||||| || ||||| || || || || ||||| || ||||| |||| || || | Sbjct 1965 AAAGATGCAGATCTTCGTGAAAACCCTAACCGGCAAGACCATCACTCTCGAGGTCGAGTC 2024 Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 ||||||| |||| | |||||| | || ||||| ||||| | || || || Sbjct 2025 CTCCGACACCATCGACAATGTCAAAGCCAAGATCCAAGACAAAGAAGGTATCCCTCCGGA 2084 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 ||||||||||| || ||||| || |||||| | ||||| Sbjct 2085 TCAGCAGCGTCTGATCTTCGCCGGTAAACAGCTCGAAGA 2123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445706912473920