Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raphanus_20sativus_20[refseq_20GCF_5F000801105.1_202015-09-29] 10,676 sequences; 426,614,037 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq5 145 2e-29 seq3 140 7e-28 seq9 134 3e-26 seq7 134 3e-26 seq6 129 1e-24 seq1376 107 4e-18 >seq5 Length=45943323 Score = 145 bits (160), Expect = 2e-29 Identities = 172/233 (74%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || |||| ||| || || ||||| | || || |||||||| || || |||||| Sbjct 16837805 ATACCTCCCCTTAACCTCAGAACAAGATGCAGAGTCGACTCTTTCTGGATGTTGTAGTCA 16837864 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | | || | ||| || || || |||||||| | || || | |||||| ||||| | Sbjct 16837865 GCCAAGGTGCGACCATCCTCAAGCTGTTTTCCGGTGAAGATCAACCTCTGCTGATCCGAT 16837924 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || ||||||||||| ||||| ||||| || || ||||| || | ||| || || || Sbjct 16837925 GGGATTCCTTCTTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCACTGCTCTCC 16837984 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 ||||| || || || ||||| || || |||||||| || ||||||||||| || Sbjct 16837985 ACCTCGAGGGTGATGGTCTTGCCCGTCAGTGTTTTCACGAATATCTGCATCTT 16838037 Score = 107 bits (118), Expect = 4e-18 Identities = 106/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || ||||| ||||| | || | || | || || |||||||| || || ||||| | Sbjct 20718127 CCACCTCTAAGCCTCAAGACCAAGTGAAGAGTTGACTCTTTCTGGATGTTGTAGTCCGCA 20718186 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 || |||||||| ||||| |||||||| ||||| || || |||||||||||||| || ||| Sbjct 20718187 AGGGTTCTACCATCTTCAAGTTGTTTGCCAGCGAATATCAGCCTCTGTTGATCCGGTGGT 20718246 Query 104453 ATTCCTTCTTTATCCTG 104469 ||||| || || ||||| Sbjct 20718247 ATTCCCTCCTTGTCCTG 20718263 >seq3 Length=29132933 Score = 140 bits (154), Expect = 7e-28 Identities = 149/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 ||||| || ||||| || || ||||| | |||||| || || || || || || || || Sbjct 2316808 GTAGACTCCTTCTGGATGTTGTAGTCTGCTAGAGTCCTTCCATCCTCAAGCTGCTTCCCG 2316867 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || |||||||| ||||| ||||| || ||||| |||||||| ||||| || || Sbjct 2316868 GCAAAGATAAGCCTCTGCTGATCCGGAGGGATGCCTTCCTTATCCTGGATCTTGGCCTTA 2316927 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | ||| ||| ||| ||||| || || || ||||| || || || ||| Sbjct 2316928 ACGTTGTCGATGGTGTCGGAGCTTTCCACCTCGAGGGTGATGGTCTTTCCTGTGAGAGTT 2316987 Query 104543 TTTACAAATATCTGCAT 104559 || || ||||||||||| Sbjct 2316988 TTCACGAATATCTGCAT 2317004 Score = 140 bits (154), Expect = 7e-28 Identities = 149/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 ||||| || ||||| || || ||||| | |||||| || || || || || || || || Sbjct 2324603 GTAGACTCCTTCTGGATGTTGTAGTCTGCTAGAGTCCTTCCATCCTCAAGCTGCTTCCCG 2324662 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || |||||||| ||||| ||||| || ||||| |||||||| ||||| || || Sbjct 2324663 GCAAAGATAAGCCTCTGCTGATCCGGAGGGATGCCTTCCTTATCCTGGATCTTGGCCTTA 2324722 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | ||| ||| ||| ||||| || || || ||||| || || || ||| Sbjct 2324723 ACGTTGTCGATGGTGTCGGAGCTTTCCACCTCGAGGGTGATGGTCTTTCCTGTGAGAGTT 2324782 Query 104543 TTTACAAATATCTGCAT 104559 || || ||||||||||| Sbjct 2324783 TTCACGAATATCTGCAT 2324799 Score = 136 bits (150), Expect = 9e-27 Identities = 163/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 ||||| || || ||||| | || || || ||||||||||||||||||| ||||| || Sbjct 16258635 AGCCTGAGAACGAGATGCAGAGTCGACTCCTTCTGAATATTATAGTCAGCAAGAGTCCTC 16258694 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 || || || || || || || ||||| || |||||||| || || || || || || || Sbjct 16258695 CCATCCTCAAGCTGCTTCCCGGCAAAGATCAGCCTCTGCTGGTCCGGTGGGATCCCCTCC 16258754 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGT 104520 ||||| || ||||| || || || || || | ||| ||| || | || ||||| | || Sbjct 16258755 TTATCTTGTATCTTAGCCTTGACGTTATCGATGGTGTCG-GAGCTCTCCACCTCCAAAGT 16258813 Query 104521 AATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 |||||||| || ||||| || || || || |||||||| Sbjct 16258814 GATAGTCTTTCCGGTAAGAGTCTTGACGAAGATCTGCAT 16258852 Score = 116 bits (128), Expect = 9e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || ||||| | || || | ||| || || || || |||||| Sbjct 2316343 GTCGACTCCTTCTGGATGTTGTAGTCTGCTAAGGTGCGACCATCCTCGAGCTGCTTTCCA 2316402 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || | ||| ||||| ||||| || ||||| || ||||||||||| || || Sbjct 2316403 GCGAAGATGAGACGCTGCTGATCCGGAGGGATGCCTTCCTTGTCCTGAATCTTGGCCTTC 2316462 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 || || || | ||| || || | || ||||| ||||| || |||||||| || | || Sbjct 2316463 ACGTTGTCAATGGTGTC-AGAGCTCTCCACCTCAAGTGTGATGGTCTTACCGGTCAAGGT 2316521 Query 104542 TTTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 2316522 CTTCACAAAAATCTGCAT 2316539 Score = 116 bits (128), Expect = 9e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || ||||| | || || | ||| || || || || |||||| Sbjct 2323917 GTCGACTCCTTCTGGATGTTGTAGTCTGCTAAGGTGCGACCATCCTCGAGCTGCTTTCCA 2323976 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || | ||| ||||| ||||| || ||||| || ||||||||||| || || Sbjct 2323977 GCGAAGATGAGACGCTGCTGATCCGGAGGGATGCCTTCCTTGTCCTGAATCTTGGCCTTC 2324036 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 || || || | ||| || || | || ||||| ||||| || |||||||| || | || Sbjct 2324037 ACGTTGTCAATGGTGTC-AGAGCTCTCCACCTCAAGTGTGATGGTCTTACCGGTCAAGGT 2324095 Query 104542 TTTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 2324096 CTTCACAAAAATCTGCAT 2324113 Score = 116 bits (128), Expect = 9e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 ||||| |||||||| || ||||| |||| | ||||||||||| || || || |||||| Sbjct 9517090 GTAGACTCTTTCTGGATGTTATAATCAGCCAATGTTCTACCGTCCTCAAGCTGCTTTCCA 9517031 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || | ||||| || || ||||| || || || || ||||| ||||| || || Sbjct 9517030 GCGAATATCAATCTCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTTGGCCTTG 9516971 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | ||| ||| || ||||| | ||||| ||||| || || | || Sbjct 9516970 ACGTTGTCGATGGTGTCGGAGCCCTCAACCTCCAAAGTAATGGTCTTTCCGGTCAAAGTC 9516911 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 9516910 TTGACAAAGATCTGCAT 9516894 Score = 116 bits (128), Expect = 9e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || || |||| | || | ||| || || || || |||||| Sbjct 16258428 GTCGACTCCTTCTGGATGTTGTAATCAGCCAAGGTGCGACCATCCTCGAGCTGCTTTCCA 16258487 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || | ||| || || ||||| || ||||| || ||||| ||||| ||||| Sbjct 16258488 GCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCTTTG 16258547 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | ||||| | || | || ||||| | ||||||||||| ||||| | || Sbjct 16258548 ACATTGTCAATAGTATC-CGAGCTCTCCACCTCCAAAGTAATAGTCTTTCCAGTCAAAGT 16258606 Query 104542 TTTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 16258607 CTTGACAAAGATCTGCAT 16258624 Score = 84.2 bits (92), Expect = 5e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 104449 AGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTC 104508 || ||| |||||||| ||||| ||||| || || ||||| || | ||| ||||| || Sbjct 17365784 AGTTATACCTTCTTTGTCCTGGATCTTAGCCTTGACATTGTCGATGGTGTCGCTGCTCTC 17365843 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 ||||| || || || ||||| || || || ||||| || ||||||||||| || Sbjct 17365844 CACCTCGAGGGTGATGGTCTTGCCCGTTAGCGTTTTCACGAATATCTGCATCTT 17365897 >seq9 Length=38354807 Score = 134 bits (148), Expect = 3e-26 Identities = 163/221 (74%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 ||||| || || || || | ||| || || ||||| ||||| ||||||| | ||||| Sbjct 21328068 AGCCTGAGGACGAGGTGAAGTGTCGACTCCTTCTGGATATTGTAGTCAGCCAAGGTTCTG 21328127 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 ||||| || || || ||||| || || || |||||||| ||||| || || || || || Sbjct 21328128 CCGTCCTCGAGCTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGGGGAATGCCCTCC 21328187 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGT 104518 || ||||| ||||| ||||| || || || | ||| || ||| ||| ||||| || Sbjct 21328188 TTGTCCTGGATCTTGGCTTTAACGTTGTCGATGGTGTCTGAGCT---TTCCACCTCAAGG 21328244 Query 104519 GTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || ||||| || || || || || || ||||||||||| Sbjct 21328245 GTGATTGTCTTTCCGGTGAGAGTCTTAACGAATATCTGCAT 21328285 Score = 131 bits (144), Expect = 4e-25 Identities = 162/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 ||||| || || | || | || || || ||||| || || ||||||| |||||||| Sbjct 21327840 AGCCTGAGAACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGAGTTCTG 21327899 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 |||||||| || || || || ||||| || | |||||| || || || || || || || Sbjct 21327900 CCGTCTTCAAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGGATCCCCTCC 21327959 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGT 104520 || ||||| ||||||||||| || || || | ||| ||| || | || |||||||| || Sbjct 21327960 TTGTCCTGGATCTTTGCTTTCACGTTGTCAATGGTGTCG-GAGCTCTCCACCTCTAGGGT 21328018 Query 104521 AATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 |||||| || || || | || || || || |||||||| Sbjct 21328019 AATAGTTTTTCCCGTCAAGGTCTTAACGAAGATCTGCAT 21328057 Score = 129 bits (142), Expect = 1e-24 Identities = 162/221 (73%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 ||||| || || ||||| | || || ||||| || || || ||||||| |||| | Sbjct 21316031 AGCCTGAGGACAAGATGAAGGGTCGACTCTTTTTGGATGTTGTAGTCAGCGAGAGCACGC 21316090 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 || ||||| ||||| || || || || || |||||||| |||| || || || ||||| Sbjct 21316091 CCATCTTCAAGTTGCTTCCCGGCGAAGATAAGCCTCTGCCGATCCGGGGGAATGCCTTCC 21316150 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATC---GCTAGGTTCTACCTCTAGT 104518 || ||||||||||| ||||| || || || | ||| || ||| ||| ||||| || Sbjct 21316151 TTGTCCTGAATCTTCGCTTTAACGTTGTCGATGGTGTCTGAGCT---TTCCACCTCGAGG 21316207 Query 104519 GTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || ||||| || || || || || || ||||||||||| Sbjct 21316208 GTGATTGTCTTTCCCGTGAGAGTCTTAACGAATATCTGCAT 21316248 Score = 125 bits (138), Expect = 2e-23 Identities = 148/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || ||||| | ||| || | ||| || || || || |||||| Sbjct 21326949 GTCGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTGCGACCATCCTCAAGCTGCTTTCCA 21327008 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || | ||| ||||| ||||| || ||||| || || || ||||| ||||| Sbjct 21327009 GCGAAGATGAGACGCTGCTGATCTGGAGGGATCCCTTCCTTGTCTTGGATCTTGGCTTTC 21327068 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 || || || | ||| || | || | || ||||| ||||| || ||||||||||| | || Sbjct 21327069 ACGTTATCAATGGTGTC-CGAGCTCTCCACCTCCAGTGTGATGGTCTTACCAGTCAAGGT 21327127 Query 104542 TTTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 21327128 CTTGACAAAGATCTGCAT 21327145 Score = 120 bits (132), Expect = 7e-22 Identities = 147/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || ||||| | ||| || | ||| || || || || |||||| Sbjct 21302952 GTCGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTGCGACCATCCTCAAGCTGCTTTCCA 21303011 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || | ||| ||||| ||||| || ||||| || || || ||||| ||||| Sbjct 21303012 GCGAAGATGAGACGCTGCTGATCTGGAGGGATCCCTTCCTTGTCTTGGATCTTGGCTTTC 21303071 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | ||| || | || | || ||||| ||||| || ||||||||||| | || Sbjct 21303072 ACATTATCAATGGTGTC-CGAGCTCTCCACCTCCAGTGTGATGGTCTTACCAGTCAAGGT 21303130 Query 104542 TTTTACAAATATCTGCAT 104559 || || || || ||||| Sbjct 21303131 CTTGACGAAGATTTGCAT 21303148 Score = 118 bits (130), Expect = 2e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 ||||| | || |||| | || || |||||||| |||| ||||||| |||||| | Sbjct 21315584 AGCCTGACAACGAGATAAAGAGTTGACTCTTTCTGGATATCGTAGTCAGCGAGAGTTGTC 21315643 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 || || | || || ||||| ||||| || || | ||| ||||||||||| || || || Sbjct 21315644 CCATCCTGGAGCTGCTTTCCGGCAAAGATGAGACGCTGCTGATCAGGAGGAATACCCTCC 21315703 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521 || ||||| ||||| ||||| || || || |||||||| | || ||||| | ||| Sbjct 21315704 TTGTCCTGGATCTTAGCTTTAACGTTGTCAACGGTATCAGAACTCTCCACCTCCAACGTA 21315763 Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| ||| | || | ||||| |||||||| Sbjct 21315764 ATGGTCTTGCCACTGAGCATCCGCACAAAGATCTGCAT 21315801 Score = 102 bits (112), Expect = 2e-16 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || ||||||||||| || || |||| | || | ||| || || || || || ||| Sbjct 21315377 GTTGACTCTTTCTGAATGTTGTAATCAGCCAAGGTGCGACCATCCTCAAGCTGCTTGCCA 21315436 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || | ||| || || || || || || || || ||||||||||| || || Sbjct 21315437 GCGAAGATGAGACGCTGCTGGTCCGGTGGGATCCCCTCCTTGTCCTGAATCTTGGCCTTG 21315496 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 || || || | ||| ||| || | || ||||| | || |||||||| || || ||||| Sbjct 21315497 ACGTTGTCAATGGTGTCG-GAGCTCTCCACCTCCAAAGTGATAGTCTTCCCGGTCAGTGT 21315555 Query 104542 TTTTACAAATATCTGCAT 104559 || | ||| |||||||| Sbjct 21315556 CTTAATAAAAATCTGCAT 21315573 Score = 93.3 bits (102), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 12/198 (6%) Strand=Plus/Plus Query 104362 TGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCC 104421 |||||| || || ||||| || ||||||| ||||| | | | | || || ||||| Sbjct 21315835 TGTAGACTCCTTTTGAATGTTGTAGTCAGCGAGAGTGATCCTGCCG---AGCTGCTTTCC 21315891 Query 104422 AGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTT 104481 ||||| | | |||||| || || ||||| || || ||||| || |||||||| ||||| Sbjct 21315892 GGCAAAGACCAACCTCTGCTGGTCTGGAGGAATGCCCTCTTTGTCTTGAATCTTGGCTTT 21315951 Query 104482 TACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 || || ||| | | || ||||| | ||||||||||| || || || || Sbjct 21315952 AACGTTATCTGAGCTCTCC---------ACCTCCAAAGTAATAGTCTTTCCGGTTAGGGT 21316002 Query 104542 TTTTACAAATATCTGCAT 104559 ||| || || |||||||| Sbjct 21316003 TTTGACGAAGATCTGCAT 21316020 >seq7 Length=27187321 Score = 134 bits (148), Expect = 3e-26 Identities = 170/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| || | ||| || ||||| | ||||| ||||||||||| || |||||| Sbjct 639885 ATGCCACCTCTGAGTCGAAGCACAAGATGCAGCGTAGACTCTTTCTGAATGTTGTAGTCA 639944 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | ||| || | || || || || || || || ||||| || |||||||| || || || Sbjct 639945 GCTAGCGTGCGTCCATCCTCCAGCTGCTTACCGGCAAAGATGAGCCTCTGCTGGTCCGGT 640004 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508 || || || ||||||||||| ||||| || || || || || | ||| || || | || Sbjct 640005 GGGATACCCTCTTTATCCTGGATCTTAGCCTTGACGTTATCAATGGTGTC-TGAGCTCTC 640063 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| | ||||| || ||||| || || || || ||||| || ||||| Sbjct 640064 AACCTCCAAAGTAATGGTTTTACCGGTGAGGGTCTTGACAAAGATTTGCAT 640114 Score = 127 bits (140), Expect = 5e-24 Identities = 161/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 ||||| || || ||||| | || || ||||| || || || || |||| ||||| || Sbjct 456699 AGCCTGAGGACGAGATGAAGAGTGGACTCTTTGTGGATGTTGTAATCAGCAAGAGTCCTG 456640 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 || ||||| || || || || || || || | |||||| ||||| ||||| || ||||| Sbjct 456639 CCATCTTCGAGCTGCTTACCGGCGAAGATCAACCTCTGCTGATCGGGAGGGATACCTTCC 456580 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT-ACCTCTAGTGT 104520 |||||||| ||||| ||||| || || || | || ||| || || ||||| || || Sbjct 456579 TTATCCTGGATCTTGGCTTTAACGTTGTCGATCGTGTCGG-AGCTTAACACCTCGAGGGT 456521 Query 104521 AATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| | ||||| || || || ||||||||||| Sbjct 456520 GATCGTCTTTCAGGTAAGAGTCTTAACGAATATCTGCAT 456482 Score = 122 bits (134), Expect = 2e-22 Identities = 157/214 (73%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || ||||| | ||||| ||||||||||| || || || | ||||| | ||||| Sbjct 639674 AAGCACAAGATGCAGCGTAGACTCTTTCTGAATGTTGTAATCCGCAAGAGTACGTCCGTC 639733 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 |||||| || || || || || || || || ||||| || || || || || ||||| || Sbjct 639734 TTCTAGCTGCTTCCCGGCGAAGATAAGTCTTTGTTGGTCTGGTGGGATACCCTCTTTGTC 639793 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAG 104525 |||||||||||| || || || || | || || || | || ||||| | || || | Sbjct 639794 CTGAATCTTTGCCTTGACGTTATCGATCGTGTC-AGAGCTCTCCACCTCCAAAGTGATGG 639852 Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 | || ||||| || || || ||||| |||||||| Sbjct 639853 TTTTGCCAGTGAGGGTCTTCACAAAAATCTGCAT 639886 Score = 120 bits (132), Expect = 7e-22 Identities = 147/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || ||||||| || || | ||| || || || || || ||| Sbjct 640146 GTCGACTCCTTCTGGATGTTGTAGTCAGCGAGCGTGCGACCATCCTCCAGCTGCTTACCA 640205 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 |||||||| |||||||| ||||| ||||| || ||||| || ||||| ||||| || || Sbjct 640206 GCAAAAATAAGCCTCTGCTGATCCGGAGGGATGCCTTCCTTGTCCTGTATCTTCGCCTTG 640265 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | || ||| || | || ||||| || || || ||||| || || | || Sbjct 640266 ACATTGTCAATAGTGTCG-GAGCTCTCAACCTCGAGAGTGATGGTCTTTCCCGTCAAAGT 640324 Query 104542 TTTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 640325 CTTGACGAAGATCTGCAT 640342 Score = 116 bits (128), Expect = 9e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || ||||||||||| || ||||||| | ||| | ||| || ||||| || || ||| Sbjct 456909 GTCGACTCTTTCTGAATGTTGTAGTCAGCCAAAGTGCGACCATCCTCTAGCTGCTTCCCA 456850 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || | ||| || || || || || ||||| || |||||||| || ||||| Sbjct 456849 GCAAAGATGAGACGCTGCTGGTCCGGTGGGATGCCTTCCTTGTCCTGAATTTTGGCTTTG 456790 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | || | | | ||| ||||| || || || ||||| || || | ||| Sbjct 456789 ACGTTGTCGATAGTGTTGGAACTTTCCACCTCAAGAGTGATGGTCTTGCCGGTCAAGGTT 456730 Query 104543 TTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 456729 TTGACGAAGATCTGCAT 456713 Score = 98.7 bits (108), Expect = 2e-15 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || || || ||||| ||||||| || || | ||| || || || || || || Sbjct 639462 GTCGACTCCTTTTGGATATTGTAGTCAGCAAGCGTGCGACCATCCTCAAGCTGCTTACCG 639521 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || ||||| ||||| || || || ||||| || ||||||||||| || || Sbjct 639522 GCGAAGATGAGTCTCTGCTGATCTGGTGGGATCCCTTCCTTGTCCTGAATCTTAGCCTTG 639581 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | || || || | || ||||| | || || || || || || || || Sbjct 639582 ACATTATCGATTGTGTC-TGAGCTCTCAACCTCCAAAGTGATGGTTTTGCCGGTGAGGGT 639640 Query 104542 TTTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 639641 CTTAACAAAAATCTGCAT 639658 >seq6 Length=53636577 Score = 129 bits (142), Expect = 1e-24 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 104332 TCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGA 104391 ||| ||||| || | || || | || | || || || ||||| || || ||||| | Sbjct 30640176 TCCTCCTCTCAGGCGGAGCACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCCGC 30640117 Query 104392 TAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGG 104451 || || || |||||||| || || || || || || || || | ||| || || || || Sbjct 30640116 GAGCGTCCTCCCGTCTTCGAGCTGCTTCCCGGCGAAGATCAGACGCTGCTGGTCCGGTGG 30640057 Query 104452 TATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTAC 104511 || ||||| || ||||||||||| || || ||||| || | || ||| | ||| || Sbjct 30640056 GATCCCTTCCTTGTCCTGAATCTTGGCCTTGACATTGTCGATCGTGTCGGATGATTCGAC 30639997 Query 104512 CTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 |||||| || || ||||| || || || ||||| ||||| ||||||||||| Sbjct 30639996 CTCTAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCATTTT 30639946 >seq1376 Length=11974 Score = 107 bits (118), Expect = 4e-18 Identities = 88/107 (82%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || |||||||| || || ||||||| || |||| || || ||||||||||| ||| Sbjct 9959 GTGGACTCTTTCTGGATGTTGTAGTCAGCGAGCGTTCGGCCATCCTCTAGTTGTTTCCCA 9900 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTG 104469 ||||| ||||||||||||||||| || ||||| || ||||| ||||| Sbjct 9899 GCAAAGATTAGCCTCTGTTGATCTGGTGGTATCCCCTCTTTGTCCTG 9853 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151240904530608