Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raphanus_20sativus_20[refseq_20GCF_5F000801105.1_202015-09-29] 10,676 sequences; 426,614,037 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq1 167 4e-37 seq1897 158 2e-34 seq2 154 2e-33 seq5 141 1e-29 seq3 136 6e-28 seq8 132 8e-27 seq6 122 1e-23 seq5817 113 7e-21 seq4 111 2e-20 >seq1 Length=26309735 Score = 167 bits (184), Expect = 4e-37 Identities = 182/242 (75%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 |||| ||||||||||| ||||||||||| || ||||||||||| |||||||| ||||| | Sbjct 2901232 GAGACAACATCCAAGGTATCACCAAGCCTGCCATCCGTCGTCTTGCTCGTCGAGGTGGCG 2901173 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 |||||||| | || || |||| || |||| | | || | |||||||||||| Sbjct 2901172 TCAAGCGTATTAGCGGTCTGATCTACGAGGAGACAAGAGGAGTCCTCAAGATCTTCCTCG 2901113 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 ||| || |||| ||||| || ||| ||||||||||||| | ||||| ||||| Sbjct 2901112 AGAATGTCATCCGCGATGCCGTCACCTACACCGAGCACGCTAGGAGGAAGACCGTCACAG 2901053 Query 16638 CCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTT 16697 |||||||| | |||||||| ||||| | ||||| || | | || ||||| || ||| Sbjct 2901052 CCATGGATGTTGTCTATGCTTTGAAGAGGCAAGGTCGCACTCTCTACGGTTTCGGCGGTT 2900993 Query 16698 AA 16699 || Sbjct 2900992 AA 2900991 Score = 163 bits (180), Expect = 4e-36 Identities = 183/245 (75%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 ||| |||| ||||||||||| ||||||||||| || ||||||||||| |||||||| ||| Sbjct 2837861 CTTAGAGACAACATCCAAGGTATCACCAAGCCTGCCATCCGTCGTCTCGCTCGTCGAGGT 2837920 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 ||||| |||||| | || | |||| || |||| | | || | ||||||||| Sbjct 2837921 GGAGTAAAGCGTATTAGCGGTCTCATCTACGAGGAGACCAGAGGAGTCCTCAAGATCTTC 2837980 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 ||| ||| || |||| || || || ||| ||||||||||||| | ||||||||| Sbjct 2837981 CTCGAGAATGTCATCCGCGACGCCGTCACCTACACCGAGCACGCTAGGAGGAAGACTGTC 2838040 Query 16634 ACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGA 16693 ||| |||||||| | || ||||| ||||| | ||||| || | | || ||||| || Sbjct 2838041 ACCGCCATGGATGTGGTTTATGCGTTGAAGAGGCAAGGACGCACTCTCTACGGTTTCGGC 2838100 Query 16694 AGTTA 16698 |||| Sbjct 2838101 GGTTA 2838105 >seq1897 Length=12610 Score = 158 bits (174), Expect = 2e-34 Identities = 179/240 (75%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 16460 GATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTC 16519 |||||||||||||| ||||||||||| |||||||||||||| ||||| || ||||||||| Sbjct 6621 GATAACATCCAAGGTATCACCAAGCCTGCTATCCGTCGTCTTGCTCGCCGAGGTGGAGTC 6562 Query 16520 AAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAG 16579 |||||| | || || |||| || |||| | | || | |||||||||||| || Sbjct 6561 AAGCGTATAAGCGGTCTGATCTACGAGGAGACAAGAGGAGTCCTCAAGATCTTCCTCGAG 6502 Query 16580 ACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCC 16639 | || |||| || || || ||| ||||||||||| | | || || |||||| || Sbjct 6501 AATGTCATCCGCGACGCCGTCACCTACACCGAGCACGCCAGGAGGAAAACCGTCACCGCC 6442 Query 16640 ATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 |||||| | |||||||| ||||| | || || || | | || ||||| || ||||| Sbjct 6441 ATGGATGTGGTCTATGCGTTGAAGAGGCAGGGACGCACTCTCTACGGTTTCGGCGGTTAA 6382 >seq2 Length=43799612 Score = 154 bits (170), Expect = 2e-33 Identities = 175/235 (74%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 |||| |||||||| |||||||||||||| ||||| || | ||||||| | ||||||| Sbjct 22804988 GAGACAACATCCAGGGAATCACCAAGCCTGCTATTCGGAGGTTGGCTCGCAGGGGTGGAG 22804929 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 |||||||| || ||| || |||| || |||| |||| || | |||||||| | Sbjct 22804928 TCAAGCGTATCAGTGGTCTGATCTACGAGGAGACACGTGGAGTCCTCAAGATCTTTTTGG 22804869 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 ||| ||| |||| ||| || | ||| ||||||||||| | | |||||||| || Sbjct 22804868 AGAACGTCATCCGTGACGCCGTGACCTACACCGAGCACGCCAGGAGGAAGACTGTGACGG 22804809 Query 16638 CCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 |||||||| |||||||||| ||||| | ||||| | | | |||| || ||||| Sbjct 22804808 CCATGGATGTCGTCTATGCGTTGAAGAGGCAAGGGAGGACGCTTTACGGATTTGG 22804754 >seq5 Length=45943323 Score = 141 bits (156), Expect = 1e-29 Identities = 180/248 (73%), Gaps = 0/248 (0%) Strand=Plus/Minus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 ||| | |||||||||||||| ||||||||||| || || |||||||| ||||| | ||| Sbjct 26041306 CTTAGGGATAACATCCAAGGCATCACCAAGCCTGCCATTCGTCGTCTTGCTCGCAGAGGT 26041247 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 || ||||||||| | || | | || ||||||| || | || | |||||||| Sbjct 26041246 GGTGTCAAGCGTATAAGCGGCCTCATTTACGAAGAGACCCGAGGAGTCCTCAAGATCTTT 26041187 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 ||| ||| || |||| ||| || || ||| || |||||||||| | |||||||| Sbjct 26041186 CTCGAGAATGTCATCCGTGACGCCGTCACCTACACGGAGCACGCTAGGAGGAAGACTGTT 26041127 Query 16634 ACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGA 16693 || | |||||| | |||||||| ||||| | ||||| || | | || || || || Sbjct 26041126 ACTGCTATGGATGTTGTCTATGCTTTGAAGAGGCAAGGACGCACTCTGTACGGATTCGGC 26041067 Query 16694 AGTTAATC 16701 ||||||| Sbjct 26041066 GGTTAATC 26041059 Score = 125 bits (138), Expect = 1e-24 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||| | ||||| | | ||| ||||| |||||||||||||||||||| ||||| ||| Sbjct 27761573 GCCAAGAGGCATCGGAAAGTTCTCCGAGACAACATCCAAGGAATCACCAAACCAGCGATC 27761514 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 |||||||| || | | || || || |||||| || |||||| |||| ||||||| | Sbjct 27761513 CGTCGTCTCGCGAGGAGAGGAGGTGTGAAGCGTATCAGCGGATTGATCTACGAAGAGACT 27761454 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | || | |||||||| || ||| ||| |||| || || | || || ||| Sbjct 27761453 CGCGGCGTCCTCAAGATCTTTCTGGAGAACGTGATCCGCGACGCCGTTACTTACACAGAG 27761394 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGA 16644 |||||| || || ||||| || ||||||| Sbjct 27761393 CACGCTCGCCGGAAAACTGTTACGGCCATGGA 27761362 Score = 104 bits (114), Expect = 4e-18 Identities = 164/235 (70%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 |||| ||||||||||||||||||||||| || ||| | ||||| ||| | | || |||| Sbjct 14287020 GAGACAACATCCAAGGAATCACCAAGCCTGCGATCAGGCGTCTCGCTTGCAGAGGAGGAG 14286961 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 | ||| | || || ||| |||| ||||||| | | |||||||||||||| ||| Sbjct 14286960 TGAAGAGGATCAGCGGGTTGATCTACGAAGAGACGAGAGGGGTTTTGAAGATCTTTCTCG 14286901 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 ||| ||| || || || | || || ||||| || | | ||||| || || Sbjct 14286900 AGAACGTGATTAGAGACGCCGTGACTTACACGGAGCAAGCGAGGAGGAAGACGGTTACGG 14286841 Query 16638 CCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 | |||||| | || || || ||||| | ||||| | | ||||||| || || Sbjct 14286840 CGATGGATGTTGTTTACGCTTTGAAGAGGCAAGGTTGCACTCTTTATGGGTTCGG 14286786 >seq3 Length=29132933 Score = 136 bits (150), Expect = 6e-28 Identities = 153/205 (75%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 |||| ||||||||||||||||||||||| || || || | |||||||| | ||||||| Sbjct 23160823 GAGACAACATCCAAGGAATCACCAAGCCTGCGATTCGGAGGTTGGCTCGTAGAGGTGGAG 23160882 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 |||||||| || ||| | |||| || |||| |||| || | |||||||| | Sbjct 23160883 TCAAGCGTATCAGTGGTCTCATCTACGAGGAGACGCGTGGCGTCCTCAAGATCTTTTTGG 23160942 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 ||| ||| |||| || || || || ||||||||||||| | ||||| || ||| Sbjct 23160943 AGAACGTCATCCGCGACGCAGTCACTTACACCGAGCACGCTAGGAGGAAGACGGTGACCG 23161002 Query 16638 CCATGGATATCGTCTATGCATTGAA 16662 ||||||| |||||||||| |||| Sbjct 23161003 CCATGGACGTCGTCTATGCTCTGAA 23161027 Score = 118 bits (130), Expect = 2e-22 Identities = 174/245 (71%), Gaps = 1/245 (0%) Strand=Plus/Minus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 |||| ||||||||||||||||||||||| || ||| | ||||| ||||| | || || | Sbjct 9927674 GAGACAACATCCAAGGAATCACCAAGCCTGCGATCAGGCGTCTTGCTCGCAGAGGAGGTG 9927615 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 | ||||| || || ||| |||| ||||| | | | |||||||||||||| ||| Sbjct 9927614 TGAAGCGAATCAGCGGTTTGATCTACGAAGAAACGAGAGGAGTTTTGAAGATCTTTCTCG 9927555 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 ||| || ||| || || | || || |||||||| | | ||||| || || Sbjct 9927554 AGAATGTGATCAGAGACGCCGTGACTTACACTGAGCACGCGAGGAGGAAGACGGTGACGG 9927495 Query 16638 CCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTT 16697 | |||||| | || ||||| ||||| | ||||| |||| |||| || || || ||| Sbjct 9927494 CGATGGATGTGGTTTATGCTTTGAAGAGACAAGGACGTACTCTTTACGGATTCGGTGGTT 9927435 Query 16698 -AATC 16701 |||| Sbjct 9927434 GAATC 9927430 >seq8 Length=29681327 Score = 132 bits (146), Expect = 8e-27 Identities = 174/241 (72%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 16460 GATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTC 16519 |||||||||||||| ||||||||||| || ||||||||||| ||||| | ||||| ||| Sbjct 1253535 GATAACATCCAAGGCATCACCAAGCCTGCGATCCGTCGTCTCGCTCGCAGAGGTGGCGTC 1253476 Query 16520 AAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAG 16579 |||||| || || | |||| || |||| | | || | |||||||||||| || Sbjct 1253475 AAGCGTATCAGCGGCCTCATCTACGAGGAGACCAGAGGAGTCCTCAAGATCTTCCTCGAG 1253416 Query 16580 ACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCC 16639 | ||| |||| || || || ||| ||||||||||| | |||||||| || | Sbjct 1253415 AACGTCATCCGCGACGCCGTCACCTACACCGAGCACGCGCGCAGGAAGACTGTTACTGCT 1253356 Query 16640 ATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 |||||| | |||||||| | || | ||||| || | | || || || || ||||| Sbjct 1253355 ATGGATGTGGTCTATGCTCTCAAGAGGCAAGGACGCACTCTCTACGGGTTCGGCGGTTAA 1253296 Query 16700 T 16700 | Sbjct 1253295 T 1253295 Score = 132 bits (146), Expect = 8e-27 Identities = 174/241 (72%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 16460 GATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTC 16519 |||||||||||||| ||||||||||| || ||||||||||| ||||| | ||||| ||| Sbjct 1270698 GATAACATCCAAGGCATCACCAAGCCTGCGATCCGTCGTCTCGCTCGCAGAGGTGGCGTC 1270639 Query 16520 AAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAG 16579 |||||| || || | |||| || |||| | | || | |||||||||||| || Sbjct 1270638 AAGCGTATCAGCGGCCTCATCTACGAGGAGACCAGAGGAGTCCTCAAGATCTTCCTCGAG 1270579 Query 16580 ACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCC 16639 | ||| |||| || || || ||| ||||||||||| | |||||||| || | Sbjct 1270578 AACGTCATCCGCGACGCCGTCACCTACACCGAGCACGCGCGCAGGAAGACTGTTACTGCT 1270519 Query 16640 ATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 |||||| | |||||||| | || | ||||| || | | || || || || ||||| Sbjct 1270518 ATGGATGTGGTCTATGCTCTCAAGAGGCAAGGACGCACTCTCTACGGGTTCGGCGGTTAA 1270459 Query 16700 T 16700 | Sbjct 1270458 T 1270458 >seq6 Length=53636577 Score = 122 bits (134), Expect = 1e-23 Identities = 172/242 (71%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 |||| |||||||| |||||||||||||| | || || | |||||||| | ||||||| Sbjct 15053273 GAGACAACATCCAGGGAATCACCAAGCCGGAGATTCGGAGATTGGCTCGTAGAGGTGGAG 15053214 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 |||||||| || ||| | || | || |||| |||| || | |||||||| | Sbjct 15053213 TCAAGCGTATCAGTGGTCTCATCGACGAGGAGACGCGTGGCGTCCTCAAGATCTTTTTGG 15053154 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 ||| | |||||| || ||| || ||| ||||||||||| | | ||||| || || Sbjct 15053153 AGAACATTATCCGTGTTGCCGTCACCTACACCGAGCACGCCAGGAGGAAGACGGTAACTG 15053094 Query 16638 CCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTT 16697 ||| ||| | |||| || |||| | ||||| | | | |||| |||||||| ||| Sbjct 15053093 CCACGGACGTTATCTACGCGCTGAAGAGGCAAGGGAGGACGCTTTACGGTTTTGGCGGTT 15053034 Query 16698 AA 16699 || Sbjct 15053033 AA 15053032 Score = 113 bits (124), Expect = 7e-21 Identities = 166/235 (71%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 |||| ||||||||||||||||||||||| || ||| | ||||| ||||| | || |||| Sbjct 43107531 GAGACAACATCCAAGGAATCACCAAGCCTGCGATCAGGCGTCTCGCTCGCAGAGGAGGAG 43107472 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 | ||| | || || ||| |||| ||||||| | | |||||||||||||| ||| Sbjct 43107471 TGAAGAGGATCAGCGGGTTGATCTACGAAGAGACGAGAGGGGTTTTGAAGATCTTTCTCG 43107412 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 ||| ||| || || || | || || ||||| || | | ||||| || || Sbjct 43107411 AGAACGTGATTAGAGACGCCGTGACTTACACGGAGCAAGCGAGGAGGAAGACGGTTACGG 43107352 Query 16638 CCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 | |||||| | || || || ||||| | ||||| || | ||||||| || || Sbjct 43107351 CGATGGATGTTGTTTACGCTTTGAAGAGGCAAGGTCGCACTCTTTATGGGTTCGG 43107297 Score = 107 bits (118), Expect = 3e-19 Identities = 143/199 (72%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 |||| |||||||| |||||||||||||| || || || ||| ||||||| | || || | Sbjct 38549490 GAGACAACATCCAGGGAATCACCAAGCCTGCGATACGCCGTTTGGCTCGCAGAGGAGGCG 38549549 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 | |||||| || || || |||| || |||| |||| || | |||||||| | Sbjct 38549550 TGAAGCGTATCAGCGGTCTGATCTACGAGGAGACACGTGGAGTGCTCAAGATCTTTTTGG 38549609 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 ||| ||| |||| || || || || ||||||||||| | |||||||| ||| Sbjct 38549610 AGAACGTCATCCGCGACGCCGTCACATACACCGAGCACGCGCGTAGGAAGACTGTGACCG 38549669 Query 16638 CCATGGATATCGTCTATGC 16656 | |||||| | || ||||| Sbjct 38549670 CTATGGATGTGGTGTATGC 38549688 Score = 107 bits (118), Expect = 3e-19 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 || || || |||||||| || ||||| ||||| || || |||||| |||| | | || Sbjct 49062859 CTCCGCGACAACATCCAGGGCATCACGAAGCCGGCGATTCGTCGTTTGGCGAGGAGAGGC 49062800 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 || || |||||| || || ||| |||| || |||| ||| | |||| | ||||||||| Sbjct 49062799 GGTGTGAAGCGTATCAGCGGTTTGATCTACGAGGAGACTCGCGGTGTTCTCAAGATCTTC 49062740 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 ||| ||| ||| || | || || | || || ||||||||| | |||||||| Sbjct 49062739 CTCGAGAACGTGATTCGCGACGCCGTTACTTACACGGAGCACGCTCGCAGGAAGACTGTG 49062680 Query 16634 ACCTCCATGGATATCGTCTATGCATTGAA 16662 || | |||||| | || || || ||||| Sbjct 49062679 ACGGCGATGGATGTTGTGTACGCGTTGAA 49062651 Score = 105 bits (116), Expect = 1e-18 Identities = 169/243 (70%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 |||| ||||||||||| ||||| ||||| || ||| | | || ||||| | || || | Sbjct 45540649 GAGACAACATCCAAGGGATCACGAAGCCTGCGATCAGAAGACTCGCTCGCAGAGGAGGCG 45540590 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 | ||||| || || ||| |||| ||||| | | | |||| |||||||||| ||| Sbjct 45540589 TGAAGCGAATCAGCGGCTTGATCTACGAAGAAACCAGAGGTGTTCTGAAGATCTTTCTCG 45540530 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 ||| || ||| || || || || || |||||||| | | ||||| ||||| Sbjct 45540529 AGAATGTCATCAGAGACGCCGTCACTTACACTGAGCACGCGAGGAGGAAGACGGTCACGG 45540470 Query 16638 CCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTT 16697 | |||||| | || || || ||||| | ||||| || | | ||||| || || ||| Sbjct 45540469 CGATGGATGTTGTTTACGCTTTGAAGAGGCAAGGACGCACTCTCTATGGATTCGGTGGTT 45540410 Query 16698 AAT 16700 ||| Sbjct 45540409 AAT 45540407 >seq5817 Length=10659 Score = 113 bits (124), Expect = 7e-21 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512 ||| || || ||||||||||| || || ||||| || || || ||| | || | | || Sbjct 4008 TCTCCGCGACAACATCCAAGGGATTACAAAGCCGGCGATTCGCCGTTTAGCCAGAAGAGG 3949 Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572 ||| ||||||||| || || ||| |||| || |||| ||| | |||| | |||||||| Sbjct 3948 TGGCGTCAAGCGTATCAGCGGCTTGATCTACGAGGAGACTCGCGGTGTTCTCAAGATCTT 3889 Query 16573 CCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGT 16632 ||| ||| || |||| ||| ||| | || || ||||||||| | ||||| || Sbjct 3888 TCTCGAGAATGTGATCCGTGACGCTGTTACTTACACTGAGCACGCTCGTAGGAAGACGGT 3829 Query 16633 CACCTCCATGGATATCGTCTATGCATTGAA 16662 || | |||||| | ||||| || ||||| Sbjct 3828 GACGGCGATGGATGTTGTCTACGCGTTGAA 3799 >seq4 Length=50002108 Score = 111 bits (122), Expect = 2e-20 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 || ||||| |||||||| || ||||||||||| || || |||||||| || | | || Sbjct 38958130 CTCCGAGACAACATCCAGGGGATCACCAAGCCGGCGATTCGTCGTCTAGCGAGGAGAGGC 38958071 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 || || |||||| || || ||| |||| || |||| || | ||| | ||||||||| Sbjct 38958070 GGCGTGAAGCGTATCAGCGGTTTGATCTACGAGGAGACACGCGGCGTTCTCAAGATCTTC 38958011 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 ||| ||| || |||| ||| || | || |||||||||||| | ||||| || Sbjct 38958010 CTCGAGAATGTGATCCGTGACGCCGTTACTTACACCGAGCACGCTCGCAGGAAGACGGTG 38957951 Query 16634 ACCTCCATGGATATCGTCTATGCATTGAA 16662 || | |||||| | || || || ||||| Sbjct 38957950 ACGGCGATGGATGTTGTGTACGCGTTGAA 38957922 Score = 104 bits (114), Expect = 4e-18 Identities = 168/242 (69%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 |||| ||||||||||||||||||||||| || ||| | || || ||||| | || |||| Sbjct 34884576 GAGACAACATCCAAGGAATCACCAAGCCTGCGATCAGGCGACTCGCTCGCAGAGGAGGAG 34884517 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 | ||| | || || ||| |||| ||||||| | | ||| |||||||||| ||| Sbjct 34884516 TGAAGAGGATCAGCGGGTTGATCTACGAAGAGACGAGAGGGGTTCTGAAGATCTTTCTCG 34884457 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 ||| || || || || | || || |||||||| | | ||||| || || Sbjct 34884456 AGAATGTGATTAGAGACGCCGTGACTTACACGGAGCACGCGAGGAGGAAGACGGTGACGG 34884397 Query 16638 CCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTT 16697 | |||||| | || || || ||||| | ||||| || | | ||||| || || ||| Sbjct 34884396 CGATGGATGTTGTTTACGCTTTGAAGAGGCAAGGTCGCACTCTCTATGGGTTCGGTGGTT 34884337 Query 16698 AA 16699 || Sbjct 34884336 AA 34884335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79065438858468