Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raphanus_20sativus_20[refseq_20GCF_5F000801105.1_202015-09-29] 10,676 sequences; 426,614,037 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq9 105 5e-18 seq3 102 7e-17 seq4 93.3 3e-14 seq7 91.5 1e-13 seq5 89.7 4e-13 seq3342 86.0 5e-12 >seq9 Length=38354807 Score = 105 bits (116), Expect = 5e-18 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| ||||| | || |||| || ||||| |||||||| || ||||||||||| ||| Sbjct 21327603 CCTCCACGTAGACGCAAGACCAAGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCAGCC 21327662 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | || ||||| || ||||| ||| | || | | ||| |||||| || Sbjct 21327663 AAAGTGCGACCATCTTCCAACTGCTTGCCGGCAAAGATCAATCTCTGCTGGTCCGGTGGG 21327722 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||| || || || || ||| || || | | | | |||||| | |||| Sbjct 21327723 ATCCCCTCCTTATCTTGGATCTTAGCT--TTAACGTTGTCAATGGTGTCGGAGCTCTCCA 21327780 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| |||||||| |||||||||| ||| |||||||| |||||||| Sbjct 21327781 CCTCCAAAGTGATGGTCTTTCCGGTCAACGTCTTGACAAAGATCTGCAT 21327829 Score = 105 bits (116), Expect = 5e-18 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || ||||| || |||| || || ||||||||||| || ||||||||||| || Sbjct 21327831 CCACCACGGAGCCTGAGAACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCG 21327890 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| || |||| || | || ||||| ||| | || | || ||| |||||| || Sbjct 21327891 AGAGTTCTGCCGTCTTCAAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGG 21327950 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||| ||||| || |||||| ||||| | | | | |||||| | |||| Sbjct 21327951 ATCCCCTCCTTGTCCTGGATCTTTGCT--TTCACGTTGTCAATGGTGTCGGAGCTCTCCA 21328008 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | ||| || |||||||| |||| || || || || |||||||| Sbjct 21328009 CCTCTAGGGTAATAGTTTTTCCCGTCAAGGTCTTAACGAAGATCTGCAT 21328057 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || |||| || || || ||||||||||| || |||||||| || Sbjct 21327147 CCTCCACGCAGACGCAACACCAAGTGAAGTGTAGACTCCTTTTGGATATTGTAGTCAGCG 21327206 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || || ||||||| | || || || ||| | || | || ||| ||||| ||| Sbjct 21327207 AGAGTCCTGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCTGGAGGG 21327266 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||| ||||| || || ||| || || | | | |||||| | ||| Sbjct 21327267 ATACCCTCCTTGTCTTGGATCTTAGCT--TTGACATTATCAATGGTGTCGGAGCTCTCAA 21327324 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||| | |||||| || |||||||| || || |||||||| |||||||| Sbjct 21327325 CTTCGAGGGTGATTGTCTTTCCGGTTAGTGTCTTGACAAAGATCTGCAT 21327373 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || |||| || || || ||||||||||| || |||||||| || Sbjct 21303150 CCTCCACGCAGACGCAACACCAAGTGAAGTGTAGACTCCTTTTGGATATTGTAGTCAGCG 21303209 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || || ||||||| | || || || ||| | || | || ||| ||||| ||| Sbjct 21303210 AGAGTCCTGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCTGGAGGG 21303269 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||| ||||| || || ||| || || | | | |||||| | |||| Sbjct 21303270 ATACCCTCCTTGTCTTGGATCTTAGCT--TTGACATTATCAATGGTGTCGGAGCTCTCCA 21303327 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| || ||||| || ||||||| || || || ||||||||||| Sbjct 21303328 CCTCCAAAGTAATGGTCTTGCCGGTCAATGTCTTAACGAAAATCTGCAT 21303376 >seq3 Length=29132933 Score = 102 bits (112), Expect = 7e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || ||||| || || | ||| ||||| |||||||| || ||||||||||||||| Sbjct 9516892 CCACCACGAAGCCTGAGAACGAGATGAAGCGTAGACTCCTTCTGGATGTTGTAGTCGGCC 9516833 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| || |||| || | || ||||| || | || |||| ||| || ||| ||| Sbjct 9516832 AATGTTCTGCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGATCCGGAGGG 9516773 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | || || ||||| || || ||| || || | | | | |||||| | ||| Sbjct 9516772 ATACCTTCCTTGTCCTGGATCTTGGCT--TTGACGTTGTCGATGGTGTCGGAGCTTTCCA 9516715 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | ||||||||| ||||| || || || || || || |||||||| Sbjct 9516714 CCTCGAGGGTGATGGTCTTTCCCGTGAGAGTCTTAACGAAGATCTGCAT 9516666 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || ||||| || || | ||||| || |||||||| || ||||||||||| || Sbjct 2324345 CCACCACGAAGCCTGAGGACGAGATGCAAAGTTGACTCCTTCTGAATGTTGTAGTCAGCA 2324404 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | | ||||| | || ||||| ||| | || | || ||| |||||| || Sbjct 2324405 AGAGTCCTTCCATCCTCGAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGG 2324464 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||| || || || || || ||| || | | | | ||||||| | |||| Sbjct 2324465 ATACCCTCCTTATCCTGGATCTTAGC--CTTAACGTTGTCAATAGTGTCGGAGCTCTCCA 2324522 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| ||||| || |||||||||| || |||||||| |||||||| Sbjct 2324523 CCTCCAAAGTGATAGTCTTTCCGGTCAATGTCTTGACAAAGATCTGCAT 2324571 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || ||||| || |||| || || || |||||||| || ||||||||||| ||| Sbjct 2324115 CCACCACGAAGCCTTAGCACCAAGTGAAGTGTTGACTCCTTCTGGATGTTGTAGTCAGCC 2324174 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | ||||| | || || || || | || || ||||| |||||| ||| Sbjct 2324175 AAGGTGCGACCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 2324234 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||| || ||||| || | || | | | | ||||||| | |||| Sbjct 2324235 ATGCCTTCCTTGTCCTGGATCTNNNNNNNNNNACGTTGTCAATAGTGTCGGAGCTCTCCA 2324294 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| ||||| || |||||||||| || ||||||||||||||||| Sbjct 2324295 CCTCCAAAGTGATAGTCTTTCCGGTCAAAGTCTTGACAAAAATCTGCAT 2324343 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/233 (70%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| ||||| | || || | || ||||| |||||||| || ||||||||||||||| Sbjct 16258854 CCTCCACGTAGACGCAAGACAAGGTGAAGCGTAGACTCCTTCTGGATGTTGTAGTCGGCC 16258913 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | |||| | ||||| | || || || || | || || ||||| || ||| ||| Sbjct 16258914 AAGGTTCGACCATCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGAGGG 16258973 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | || || ||||| || || ||| ||||| | | | | |||||| | ||| Sbjct 16258974 ATCCCTTCCTTGTCCTGGATCTTGGCT--TTCACGTTGTCGATGGTGTCGGAGCTTTCCA 16259031 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939 || | |||||| || ||||| || || ||||| || || |||||||| ||| Sbjct 16259032 CCTCGAGGGTGATTGTCTTTCCCGTGAGAGTTTTCACGAAGATCTGCATCTTG 16259084 Score = 86.0 bits (94), Expect = 5e-12 Identities = 162/238 (68%), Gaps = 13/238 (5%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || ||||| || |||| || || || |||||||| || ||||||||||| ||| Sbjct 2316541 CCACCACGAAGCCTTAGCACCAAGTGAAGTGTTGACTCCTTCTGGATGTTGTAGTCAGCC 2316600 Query 16769 ATG---------GTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGG 16819 | | || | | ||||| | || ||||| ||| | || | || ||| ||| Sbjct 2316601 AAGTCAGCAAGAGTCCTTCCATCCTCGAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGG 2316660 Query 16820 TCCACAGGCACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGC 16877 ||| || | ||||| || || || || || ||| || | | | | ||||||| Sbjct 2316661 TCCGGTGGGATACCCTCCTTATCCTGGATCTTAGC--CTTAACGTTGTCAATAGTGTCGG 2316718 Query 16878 CGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | |||| |||| ||||| || |||||||||| || |||||||| |||||||| Sbjct 2316719 AGCTCTCCACCTCCAAAGTGATAGTCTTTCCGGTCAATGTCTTGACAAAGATCTGCAT 2316776 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/208 (70%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || |||||||||||||| | ||| ||||||||| || Sbjct 11118413 TGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCCTCCAGCTGC 11118472 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 || || || | || || ||||| |||||| ||| | ||| || ||||| || || Sbjct 11118473 TTTCCGGCGAAGATCAGTCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTG 11118532 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 || ||| || | | | | |||||| || ||| || | |||||| || || || | Sbjct 11118533 GC--CTTGACATTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATTGTCTTCCCCG 11118590 Query 16911 TCAGCGTTTTGACAAAAATCTGCATTTT 16938 | || ||||| || || |||||||| || Sbjct 11118591 TTAGGGTTTTCACGAAGATCTGCATCTT 11118618 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || ||||| | || |||| || || || |||||||| || ||||||||||| || Sbjct 2316778 CCACCACGTAGACGCAACACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCTGCT 2316837 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | | ||||| | || || || ||| | ||||||| ||| || ||| ||| Sbjct 2316838 AGAGTCCTTCCATCCTCAAGCTGCTTCCCGGCAAAGATAAGCCTCTGCTGATCCGGAGGG 2316897 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||| || || || || || || ||| || | | | | |||||| | ||| Sbjct 2316898 ATGCCTTCCTTATCCTGGATCTTGGC--CTTAACGTTGTCGATGGTGTCGGAGCTTTCCA 2316955 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | ||||||||| ||||| || || ||||| || || |||||||| Sbjct 2316956 CCTCGAGGGTGATGGTCTTTCCTGTGAGAGTTTTCACGAATATCTGCAT 2317004 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || ||||| | || |||| || || || |||||||| || ||||||||||| || Sbjct 2324573 CCACCACGTAGACGCAACACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCTGCT 2324632 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | | ||||| | || || || ||| | ||||||| ||| || ||| ||| Sbjct 2324633 AGAGTCCTTCCATCCTCAAGCTGCTTCCCGGCAAAGATAAGCCTCTGCTGATCCGGAGGG 2324692 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||| || || || || || || ||| || | | | | |||||| | ||| Sbjct 2324693 ATGCCTTCCTTATCCTGGATCTTGGC--CTTAACGTTGTCGATGGTGTCGGAGCTTTCCA 2324750 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | ||||||||| ||||| || || ||||| || || |||||||| Sbjct 2324751 CCTCGAGGGTGATGGTCTTTCCTGTGAGAGTTTTCACGAATATCTGCAT 2324799 >seq4 Length=50002108 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||||| || | || |||| || ||||| |||||||| || |||||||||||||| Sbjct 49702186 CCTCCTCTCAGACGGAGAACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 49702127 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| ||||||| | || || || || |||| || ||||| |||||| ||| Sbjct 49702126 AGGGTGCGTCCGTCCTCGAGCTGCTTTCCGGCGAAAATGAGGCGCTGCTGGTCCGGAGGG 49702067 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||| || ||||| || || || ||| || | | | | |||||| || ||| Sbjct 49702066 ATGCCTTCCTTGTCTTGGATCTTGGC--CTTGACGTTGTCGATGGTGTCGGAGGACTCGA 49702009 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | ||| || || || || || || ||||| || || |||||||| Sbjct 49702008 CCTCGAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 49701960 >seq7 Length=27187321 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || ||||| |||||||| || ||||||||||| || | || | ||||||| || Sbjct 640140 TGAAGCGTCGACTCCTTCTGGATGTTGTAGTCAGCGAGCGTGCGACCATCCTCCAGCTGC 640199 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 || || ||| ||||||||| ||| || ||| ||| | ||| || ||||| || | | Sbjct 640200 TTACCAGCAAAAATAAGCCTCTGCTGATCCGGAGGGATGCCTTCCTTGTCCTGTATCTTC 640259 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 ||| || | | | | ||||||| | ||| || | |||||||| ||||| ||| Sbjct 640260 GCCTTGACATTGTCAATAGTGTCGGAGCTCTCAACCTCGAGAGTGATGGTCTTTCCCGTC 640319 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 | || ||||| || |||||||| Sbjct 640320 AAAGTCTTGACGAAGATCTGCAT 640342 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || |||| | ||| || || | ||| || || |||||||| || ||||||||||||||| Sbjct 640344 CCACCTCTCAACCTGAGAACGAGATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCC 640403 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | ||||| | ||||| || || | || |||| ||| |||||| ||| Sbjct 640404 AAGGTACGTCCATCCTCGAGCTGTTTACCGGCGAAGATGAGCCTCTGCTGGTCCGGAGGA 640463 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | || || ||||| || || || ||| || | | | |||||| | ||| Sbjct 640464 ATACCTTCCTTGTCCTGGATCTTAGC--CTTGACGTTATCGATGGTGTCGGAGCTCTCGA 640521 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||| | |||||||| || ||||| || ||||| || ||||| ||||| Sbjct 640522 CTTCGAGAGTGATGGTCTTGCCGGTGAGAGTTTTCACGAAAATTTGCAT 640570 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/217 (69%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || || | ||| ||||| |||||||| || |||||||||||||| | ||| | |||| Sbjct 18014066 AGGACGAGATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCT 18014125 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 |||| ||||| || || | || || ||||| |||||| || | ||||| ||||| Sbjct 18014126 TCCAGCTGTTTCCCGGCGAAGATCAGTCGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCC 18014185 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || ||| || | | | | |||||| | || || | |||||| | Sbjct 18014186 TGGATCTTGGC--CTTGACATTGTCGATGGTGTCGGATGATTCGACCTCGAGGGTGATTG 18014243 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938 | || || || || ||||| || || |||||||| || Sbjct 18014244 TCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 18014280 >seq5 Length=45943323 Score = 89.7 bits (98), Expect = 4e-13 Identities = 160/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| | || |||||| || | |||||| || ||||| || || ||||||||||| ||| Sbjct 16837808 CCTCCCCTTAACCTCAGAACAAGATGCAGAGTCGACTCTTTCTGGATGTTGTAGTCAGCC 16837867 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | ||||| | ||||| || | | || | || ||| || ||| || Sbjct 16837868 AAGGTGCGACCATCCTCAAGCTGTTTTCCGGTGAAGATCAACCTCTGCTGATCCGATGGG 16837927 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | || |||||||| || || || ||| || | | | | ||||| | | |||| Sbjct 16837928 ATTCCTTCTTTGTCCTGGATCTTGGC--CTTGACATTGTCGATGGTGTCACTGCTCTCCA 16837985 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938 || | ||||||||| || || ||||| ||||| || || |||||||| || Sbjct 16837986 CCTCGAGGGTGATGGTCTTGCCCGTCAGTGTTTTCACGAATATCTGCATCTT 16838037 Score = 82.4 bits (90), Expect = 6e-11 Identities = 159/233 (68%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 ||| || || || | || || | ||| ||||| |||||||| || |||||||||||||| Sbjct 32128069 CCCACCACGGAGACGGAGGACGAGATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 32128010 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 | || | |||| |||| || || || || | || || ||||| |||||| ||| Sbjct 32128009 GAGAGTGCGGCCGTCTTCCAGCTGCTTCCCGGCGAATATCAGTCGCTGCTGGTCCGGAGG 32127950 Query 16828 CACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCC 16885 | || || ||||| || || || ||| || | | | | |||||| || ||| Sbjct 32127949 GATCCCTTCCTTGTCCTGGATCTTGGC--CTTGACGTTGTCGATGGTGTCGGAGGACTCG 32127892 Query 16886 GTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938 || | ||| || || || || || || ||||| || || |||||||| || Sbjct 32127891 ACCTCGAGGGTTATCGTCTTACCCGTTAGGGTTTTCACGAAGATCTGCATCTT 32127839 >seq3342 Length=4839 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/208 (70%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || |||||||||||||| | ||| ||||||||| || Sbjct 2590 TGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCCTCCAGCTGC 2649 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 || || || | || || ||||| |||||| ||| | ||| || ||||| || || Sbjct 2650 TTCCCGGCGAAGATCAGTCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTG 2709 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 || ||| || | | | | |||||| || ||| || | |||||| || || || | Sbjct 2710 GC--CTTGACATTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATTGTCTTCCCCG 2767 Query 16911 TCAGCGTTTTGACAAAAATCTGCATTTT 16938 | || ||||| || || |||||||| || Sbjct 2768 TTAGGGTTTTCACGAAGATCTGCATCTT 2795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405035292481240