Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raphanus_20sativus_20[refseq_20GCF_5F000801105.1_202015-09-29] 10,676 sequences; 426,614,037 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq9 138 9e-28 seq7 129 5e-25 seq3 102 7e-17 seq4 96.9 3e-15 >seq9 Length=38354807 Score = 138 bits (152), Expect = 9e-28 Identities = 165/224 (74%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||||| |||| || | ||||| || || ||||| | || ||||| | | || Sbjct 21315573 ATGCAGATTTTTATTAAGACACTGACCGGGAAGACTATCACTTTGGAGGTGGAGAGCTCC 21315514 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || ||||| ||||||||||| || ||||| || || Sbjct 21315513 GACACCATTGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGGATCCCACCGGACCAG 21315454 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || ||||| ||| | |||||| |||||| | | ||||||||| Sbjct 21315453 CAGCGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGTCGCACCTTGGCTGATTACAAC 21315394 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGG 22442 ||||| ||||| || ||| | || || || || || ||||||| Sbjct 21315393 ATTCAGAAAGAGTCAACCCTTCACTTGGTGTTACGTCTGCGCGG 21315350 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || ||||| || | ||||| || || ||||||| || ||||| | || Sbjct 21327601 ATGCAGATCTTCGTTAAGACACTGACCGGGAAGACCATCACTCTGGAGGTGGAGAGTTCC 21327542 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | | || || || |||||||||||||| || ||||| || || Sbjct 21327541 GACACCATTGACAACGTGAAGGCTAAGATCCAAGACAAGGAGGGAATCCCACCGGACCAG 21327482 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || || || ||| | |||||| ||||| | | ||||||||| Sbjct 21327481 CAGCGTCTCATCTTCGCTGGAAAGCAGCTCGAGGATGGTCGCACTTTGGCAGATTACAAC 21327422 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||||||||| || || | ||||| || ||||| | || |||||| Sbjct 21327421 ATTCAAAAAGAGTCGACTCTTCATTTGGTGTTGCGTCTACGTGGAGGT 21327374 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || || || || ||||| || |||| || || ||||| | | | Sbjct 21303148 ATGCAAATCTTCGTCAAGACCTTGACTGGTAAGACCATCACACTGGAGGTGGAGAGCTCG 21303089 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || | ||| || || ||||||||||| || || || || ||||| Sbjct 21303088 GACACCATTGATAATGTGAAAGCCAAGATCCAAGACAAGGAAGGGATCCCTCCAGATCAG 21303029 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || || || ||| | |||||| |||||| | |||| |||||| Sbjct 21303028 CAGCGTCTCATCTTCGCTGGAAAGCAGCTTGAGGATGGTCGCACCCTAGCCGACTACAAC 21302969 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTTT 22449 || || || || || ||| | || || || ||||| | || || |||||| Sbjct 21302968 ATCCAGAAGGAGTCGACCCTTCACTTGGTGTTGCGTCTCCGTGGTGGTTTT 21302918 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || || || ||||| || |||| || || ||||| | | | Sbjct 21327145 ATGCAGATCTTTGTCAAGACCTTGACTGGTAAGACCATCACACTGGAGGTGGAGAGCTCG 21327086 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | | ||| || || ||||||||||| || || || || ||||| Sbjct 21327085 GACACCATTGATAACGTGAAAGCCAAGATCCAAGACAAGGAAGGGATCCCTCCAGATCAG 21327026 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || || || ||| | |||||| |||||| | |||| |||||| Sbjct 21327025 CAGCGTCTCATCTTCGCTGGAAAGCAGCTTGAGGATGGTCGCACCCTAGCCGACTACAAC 21326966 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTTT 22449 || || || || || ||| | || || || ||||| | || || |||||| Sbjct 21326965 ATCCAGAAGGAGTCGACCCTTCACTTGGTGTTGCGTCTCCGTGGTGGTTTT 21326915 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| ||||| || || ||||| || || | ||| | || ||||| | | || Sbjct 21303376 ATGCAGATTTTCGTTAAGACATTGACCGGCAAGACCATTACTTTGGAGGTGGAGAGCTCC 21303317 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || ||||| || || ||||||||||||||||| || || || || Sbjct 21303316 GACACCATTGATAATGTCAAAGCTAAGATCCAAGACAAGGAGGGTATCCCTCCAGACCAG 21303257 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || |||||||| || ||| | ||||| | | || || | || ||||| Sbjct 21303256 CAGAGGTTGATCTTTGCCGGAAAGCAGCTCGAGGACGGCAGGACTCTCGCTGACTACAAT 21303197 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || ||||| || || || | || || || ||||| |||| ||||| Sbjct 21303196 ATCCAAAAGGAGTCTACACTTCACTTGGTGTTGCGTCTGCGTGGAGG 21303150 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || ||||||| || || |||| || ||||| || | | || Sbjct 21327373 ATGCAGATCTTTGTCAAGACACTAACCGGAAAGACAATCACCCTCGAAGTTGAGAGCTCC 21327314 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || ||||| || || ||||||||||||||||| || || || || Sbjct 21327313 GACACCATTGATAATGTCAAAGCTAAGATCCAAGACAAGGAGGGTATCCCTCCAGACCAG 21327254 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || |||||||| || ||| | ||||| | | || || | || ||||| Sbjct 21327253 CAGAGGTTGATCTTTGCCGGAAAGCAGCTCGAGGACGGCAGGACTCTCGCTGACTACAAT 21327194 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || ||||| || || || | || || || ||||| |||| ||||| Sbjct 21327193 ATCCAAAAGGAGTCTACACTTCACTTGGTGTTGCGTCTGCGTGGAGG 21327147 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || || ||||| || || ||||| | || ||||| | | || Sbjct 21327829 ATGCAGATCTTTGTCAAGACGTTGACCGGAAAGACCATCACTTTGGAGGTGGAGAGCTCC 21327770 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | | ||| || || ||||| |||||||| || ||||| || || Sbjct 21327769 GACACCATTGACAACGTTAAAGCTAAGATCCAAGATAAGGAGGGGATCCCACCGGACCAG 21327710 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || ||||||||||| ||||| || ||| ||||| | | || |||||| Sbjct 21327709 CAGAGATTGATCTTTGCCGGCAAGCAGTTGGAAGATGGTCGCACTTTGGCTGACTACAAC 21327650 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || || || | || || || ||||| | || |||||| Sbjct 21327649 ATCCAGAAGGAGTCTACGCTCCACTTGGTCTTGCGTCTACGTGGAGGT 21327602 Score = 104 bits (114), Expect = 2e-17 Identities = 144/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 22214 TAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAA 22273 || ||||||| || || ||||| ||| | ||||| || || |||| ||||| ||||||| Sbjct 21328290 TACAGATGCAGATATTCGTTAAGACTCTCACCGGAAAGACAATCACCCTTGAGGTGGAAA 21328231 Query 22274 CCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCG 22333 | | || ||| | ||| | | ||| || || || ||||||||||| ||||| || | Sbjct 21328230 GCTCAGACACCATCGACAACGTTAAAGCCAAGATCCAGGACAAGGAGGGCATTCCCCCGG 21328171 Query 22334 ATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATT 22393 |||| || | ||||| || ||||| || ||| | ||||| | | ||| | | || | Sbjct 21328170 ATCAGCAGAGGCTTATCTTCGCCGGAAAGCAGCTCGAGGACGGCAGAACCTTGGCTGACT 21328111 Query 22394 ACAACATTCAAAAAGAATCCAC 22415 |||| || || || || || || Sbjct 21328110 ACAATATCCAGAAGGAGTCGAC 21328089 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || ||||| || || || || ||||| | || || || ||||| | | || Sbjct 21328057 ATGCAGATCTTCGTTAAGACCTTGACGGGAAAAACTATTACCCTAGAGGTGGAGAGCTCC 21327998 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | | ||| ||| || || ||||||||||| || ||||| || || Sbjct 21327997 GACACCATTGACAACGTGAAAGCAAAGATCCAGGACAAGGAGGGGATCCCACCGGACCAG 21327938 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || ||||||||||| ||| | || || | | || || | || |||||| Sbjct 21327937 CAGAGGTTGATCTTTGCCGGCAAGCAGCTTGAAGACGGCAGAACTCTCGCTGACTACAAC 21327878 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTT 22428 || || || || |||||| | || || ||| Sbjct 21327877 ATCCAGAAGGAGTCCACCCTCCACTTGGTT 21327848 Score = 98.7 bits (108), Expect = 8e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 |||||||||| || ||||| ||| | ||||| || ||| |||| || || ||||||| | Sbjct 21303606 AGATGCAAATCTTCGTTAAGACTCTCACCGGAAAGACGATCACCCTCGAGGTGGAAAGCT 21303547 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 | || ||| | ||| | | ||| || || || ||||||||||| || ||||| || | Sbjct 21303546 CAGACACCATCGACAACGTTAAAGCTAAGATCCAGGACAAGGAGGGGATCCCACCGGACC 21303487 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | || | | || || || ||||| ||| | || || | | || || | || |||| Sbjct 21303486 AGCAGAGGTTGATCTTCGCAGGCAAGCAGCTTGAAGACGGCAGGACTCTCGCTGACTACA 21303427 Query 22397 ACATTCAAAAAGAATCCACCATACATTTAGTT 22428 |||| ||||| || || || | ||| | ||| Sbjct 21303426 ACATCCAAAAGGAGTCAACTTTGCATCTCGTT 21303395 >seq7 Length=27187321 Score = 129 bits (142), Expect = 5e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || ||||| || ||||| || || |||||||||| ||||||| || Sbjct 456713 ATGCAGATCTTCGTCAAAACCTTGACCGGCAAGACCATCACTCTTGAGGTGGAAAGTTCC 456772 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 | || | ||| | ||||| |||||||| |||||||| || || ||||| || || Sbjct 456773 AACACTATCGACAACGTCAAAGCCAAAATTCAGGACAAGGAAGGCATCCCACCGGACCAG 456832 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || ||||| || || ||| |||||||| ||||| | | || |||||| Sbjct 456833 CAGCGTCTCATCTTTGCTGGGAAGCAGCTAGAGGATGGTCGCACTTTGGCTGACTACAAC 456892 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427 ||||| ||||| || ||| | || || || Sbjct 456893 ATTCAGAAAGAGTCGACCCTTCACTTGGT 456921 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||||||||| || |||||| | ||||| || || ||||||| ||||| || | | Sbjct 640572 AGATGCAAATTTTCGTGAAAACTCTCACCGGCAAGACCATCACTCTCGAAGTCGAGAGCT 640513 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 |||| ||| | || | |||| || || || |||||||| |||||||| || || | Sbjct 640512 CCGACACCATCGATAACGTCAAGGCTAAGATCCAGGACAAGGAAGGTATTCCTCCGGACC 640453 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | || | || || || ||||| |||||| | |||||| || ||| | |||| |||| Sbjct 640452 AGCAGAGGCTCATCTTCGCCGGTAAACAGCTCGAGGATGGACGTACCTTGGCCGACTACA 640393 Query 22397 ACATTCAAAAAGAATCCACCATACATTTAGTT 22428 |||| || || || || || | ||| | ||| Sbjct 640392 ACATCCAGAAGGAGTCGACTCTCCATCTCGTT 640361 Score = 114 bits (126), Expect = 1e-20 Identities = 146/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274 ||||||||| || || || ||||| |||| || || || |||| || || || ||| | Sbjct 18014281 AAAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACAATCACCCTCGAGGTCGAATC 18014222 Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334 |||| ||| | ||| || |||| || || || ||||||||||| || ||||| || Sbjct 18014221 ATCCGACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGAATCCCACCGGA 18014162 Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394 || || || || || || ||||| |||||| | || || ||||||| || |||| || Sbjct 18014161 CCAGCAGCGACTGATCTTCGCCGGGAAACAGCTGGAAGACGGCCGCACCCTCGCCGACTA 18014102 Query 22395 CAACATTCAAAAAGAATCCAC 22415 |||||| || || || || || Sbjct 18014101 CAACATCCAGAAGGAGTCGAC 18014081 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||||||| || || | || || ||||| ||||| | || ||||| | | | Sbjct 639886 ATGCAGATTTTTGTGAAGACCCTCACTGGCAAAACCATCACTTTGGAGGTGGAGAGCTCT 639827 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | |||| ||| ||||| ||||| |||||||| ||||| || ||| Sbjct 639826 GACACGATCGATAACGTCAAGGCAAAGATTCAGGACAAAGAGGGTATCCCACCAGACCAA 639767 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | ||||| || ||||| || ||| |||| || || || | | ||||||||| Sbjct 639766 CAAAGACTTATCTTCGCCGGGAAGCAGCTAGAAGACGGACGTACTCTTGCGGATTACAAC 639707 Query 22399 ATTCAAAAAGAATCCAC 22415 ||||| ||||| || || Sbjct 639706 ATTCAGAAAGAGTCTAC 639690 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||||||||| || | ||||| ||||| ||||| | || || || | | | Sbjct 639658 ATGCAGATTTTTGTTAAGACCCTCACCGGCAAAACCATCACTTTGGAGGTTGAGAGCTCA 639599 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || |||| || ||||| |||||||| || || ||||| ||||| Sbjct 639598 GACACAATCGATAATGTCAAGGCTAAGATTCAGGACAAGGAAGGGATCCCACCAGATCAG 639539 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || || ||||| || ||| | |||||| ||||| | | || ||||| Sbjct 639538 CAGAGACTCATCTTCGCCGGTAAGCAGCTTGAGGATGGTCGCACGCTTGCTGACTACAAT 639479 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTT 22428 || ||||| || || || | || || ||| Sbjct 639478 ATCCAAAAGGAGTCGACTCTTCACTTGGTT 639449 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || || | ||||||||||| | ||| | || || || | | | Sbjct 640114 ATGCAAATCTTTGTCAAGACCCTCACCGGTAAAACCATTACTTTGGAGGTTGAGAGCTCA 640055 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | |||| || || || || || |||||||| ||||| || || Sbjct 640054 GACACCATTGATAACGTCAAGGCTAAGATCCAGGATAAAGAGGGTATCCCACCGGACCAG 639995 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || |||||||| || ||| | |||||| ||||| | | || |||||| Sbjct 639994 CAGAGGCTCATCTTTGCCGGTAAGCAGCTGGAGGATGGACGCACGCTAGCTGACTACAAC 639935 Query 22399 ATTCAAAAAGAATCCAC 22415 ||||| ||||| || || Sbjct 639934 ATTCAGAAAGAGTCTAC 639918 Score = 89.7 bits (98), Expect = 4e-13 Identities = 139/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| || || ||||| ||| | ||| | || ||| |||| || || ||| || | Sbjct 456480 AGATGCAGATATTCGTTAAGACTCTTACCTGAAAGACGATCACCCTCGAGGTGTTAAGCT 456539 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 |||| || | ||| | | ||| || || || || ||||| ||||| || ||||||| Sbjct 456540 CCGACACGATCGACAACGTTAAAGCCAAGATCCAGGATAAGGAAGGTATCCCTCCCGATC 456599 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | || | | || || ||||| || ||| | || ||| | | || | | ||||||| Sbjct 456600 AGCAGAGGTTGATCTTCGCCGGTAAGCAGCTCGAAGATGGCAGGACTCTTGCTGATTACA 456659 Query 22397 ACATTCAAAAAGAATCCAC 22415 |||| || ||||| ||||| Sbjct 456660 ACATCCACAAAGAGTCCAC 456678 >seq3 Length=29132933 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || ||||| || || || || | ||| | || ||||| | | | Sbjct 16258624 ATGCAGATCTTTGTCAAGACTTTGACTGGAAAGACTATTACTTTGGAGGTGGAGAGCTCG 16258565 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | ||| || ||||| || || || |||||||| || || || || || || Sbjct 16258564 GATACTATTGACAATGTCAAAGCCAAGATCCAGGACAAGGAAGGCATCCCTCCGGACCAG 16258505 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || || || ||| | |||||| |||||| | | ||||||||| Sbjct 16258504 CAGCGTCTCATCTTCGCTGGAAAGCAGCTCGAGGATGGTCGCACCTTGGCTGATTACAAC 16258445 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427 || || || || || ||| | || || || Sbjct 16258444 ATCCAGAAGGAGTCGACCCTTCACTTGGT 16258416 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || || ||||| || || ||||| | || ||||| | | || Sbjct 2324571 ATGCAGATCTTTGTCAAGACATTGACCGGAAAGACTATCACTTTGGAGGTGGAGAGCTCC 2324512 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || || || || || ||||||||||| ||||| || || Sbjct 2324511 GACACTATTGACAACGTTAAGGCTAAGATCCAGGATAAGGAGGGTATCCCACCGGACCAG 2324452 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || ||||||||||| ||| | |||||| | || | | || |||||| Sbjct 2324451 CAGAGGTTGATCTTTGCCGGCAAGCAGCTCGAGGATGGAAGGACTCTTGCTGACTACAAC 2324392 Query 22399 ATTCAAAAAGAATCCAC 22415 ||||| || || || || Sbjct 2324391 ATTCAGAAGGAGTCAAC 2324375 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || ||||| ||||| || || | ||| | || || || | || Sbjct 9516894 ATGCAGATCTTTGTCAAGACTTTGACCGGAAAGACCATTACTTTGGAGGTTGAGGGCTCC 9516953 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || || || |||||||||||||| || || || || Sbjct 9516954 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAG 9517013 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | ||||| || || || ||| | ||||| | || | | ||||| ||| Sbjct 9517014 CAGAGATTGATATTCGCTGGAAAGCAGCTTGAGGACGGTAGAACATTGGCTGATTATAAC 9517073 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || ||||| || || | || || || ||||| |||| ||||| Sbjct 9517074 ATCCAGAAAGAGTCTACGCTTCACTTGGTGTTGCGTCTGCGTGGAGG 9517120 >seq4 Length=50002108 Score = 96.9 bits (106), Expect = 3e-15 Identities = 142/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274 || |||||| || || || ||||| |||| || || ||| | || || || || || | Sbjct 49701956 AAGGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATAACCCTCGAGGTCGAGTC 49702015 Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334 | |||| ||| | ||| | |||| || || ||||||||||| || || || || || Sbjct 49702016 CTCCGACACCATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCGGA 49702075 Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394 || || || || || || ||||| || ||| | ||||| |||||| || |||| || Sbjct 49702076 CCAGCAGCGCCTCATTTTCGCCGGAAAGCAGCTCGAGGACGGACGCACCCTCGCCGACTA 49702135 Query 22395 CAACATTCAAAAAGAATCCAC 22415 |||||| || || || || || Sbjct 49702136 CAACATCCAGAAGGAGTCGAC 49702156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419673387615940