Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raphanus_20sativus_20[refseq_20GCF_5F000801105.1_202015-09-29] 10,676 sequences; 426,614,037 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq9 136 3e-27 seq3 127 2e-24 seq1946 122 7e-23 seq4 122 7e-23 seq7 113 4e-20 seq5 98.7 8e-16 seq3342 89.7 4e-13 >seq9 Length=38354807 Score = 136 bits (150), Expect = 3e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| |||||||| | ||| || ||||| | || || |||||||||||||||||||| Sbjct 21327372 ATACCTCCACGTAGACGCAACACCAAATGAAGAGTCGACTCTTTTTGAATGTTGTAATCT 21327431 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || ||| ||| ||| || || || || |||||| ||||||||||||| |||||||| Sbjct 21327432 GCCAAAGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGT 21327491 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || || ||||| ||||| || | | |||| |||||||| || Sbjct 21327492 GGGATTCCCTCCTTGTCTTGGATCTTAGCCTTCACGTTGTCAATGGTGTCGGAACTCTCC 21327551 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | || || |||||||| || || || || |||||||| Sbjct 21327552 ACCTCCAGAGTGATGGTCTTCCCGGTCAGTGTCTTAACGAAGATCTGCAT 21327601 Score = 122 bits (134), Expect = 7e-23 Identities = 169/236 (72%), Gaps = 3/236 (1%) Strand=Plus/Plus Query 114147 TTACAAATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTG 114206 ||| ||| ||||| | || | || || || || | || || ||||| ||||||||| Sbjct 21315341 TTAGAAACACCGC---GCAGACGTAACACCAAGTGAAGGGTTGACTCTTTCTGAATGTTG 21315397 Query 114207 TAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGG 114266 ||||| || || ||| ||| ||||| || || |||||| ||||||||||||| ||| Sbjct 21315398 TAATCAGCCAAGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGG 21315457 Query 114267 TCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTG 114326 ||||| || || || || ||||| |||||| || | | |||| |||||||| | Sbjct 21315458 TCCGGTGGGATCCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCAATGGTGTCGGAG 21315517 Query 114327 GATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || |||| || | || || |||||||| || || | |||||||||||| Sbjct 21315518 CTCTCCACCTCCAAAGTGATAGTCTTCCCGGTCAGTGTCTTAATAAAAATCTGCAT 21315573 Score = 111 bits (122), Expect = 1e-19 Identities = 166/236 (70%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 114151 AAATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAAT 114210 ||| ||| ||||| || | ||| || || || | || || || || || |||||||| | Sbjct 21326914 AAAAACCACCACGGAGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGT 21326973 Query 114211 CGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCG 114270 || | || ||| ||| ||||| || || |||||| ||||||||||||| || || | Sbjct 21326974 CGGCTAGGGTGCGACCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCTG 21327033 Query 114271 GAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATT 114330 |||| || ||||| ||||| ||||| ||| | | |||| |||||| | | | Sbjct 21327034 GAGGGATCCCTTCCTTGTCTTGGATCTTGGCTTTCACGTTATCAATGGTGTCCGAGCTCT 21327093 Query 114331 CGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 114386 | || |||| || | || || || |||| || || ||||| ||||||||| || Sbjct 21327094 CCACCTCCAGTGTGATGGTCTTACCAGTCAAGGTCTTGACAAAGATCTGCATGCCT 21327149 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || || | || | ||| | || || |||||||| |||||||| || Sbjct 21316019 ATACCACCACGGAGCCTGAGGACAAGATGAAGGGTCGACTCTTTTTGGATGTTGTAGTCA 21316078 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || ||| |||||||||||| || || ||| |||| || | ||| | ||||| Sbjct 21316079 GCGAGAGCACGCCCATCTTCAAGTTGCTTCCCGGCGAAGATAAGCCTCTGCCGATCCGGG 21316138 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||| ||||| |||||| ||| | | || | |||||| | | ||| Sbjct 21316139 GGAATGCCTTCCTTGTCCTGAATCTTCGCTTTAACGTTGTCGATGGTGTCTGAGCTTTCC 21316198 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || || || || ||||| || || || |||||||| Sbjct 21316199 ACCTCGAGGGTGATTGTCTTTCCCGTGAGAGTCTTAACGAATATCTGCAT 21316248 Score = 102 bits (112), Expect = 7e-17 Identities = 164/236 (69%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 114151 AAATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAAT 114210 ||| ||| ||||| || | ||| || || || | || || || || || |||||||| | Sbjct 21302917 AAAAACCACCACGGAGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGT 21302976 Query 114211 CGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCG 114270 || | || ||| ||| ||||| || || |||||| ||||||||||||| || || | Sbjct 21302977 CGGCTAGGGTGCGACCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCTG 21303036 Query 114271 GAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATT 114330 |||| || ||||| ||||| ||||| ||| | | |||| |||||| | | | Sbjct 21303037 GAGGGATCCCTTCCTTGTCTTGGATCTTGGCTTTCACATTATCAATGGTGTCCGAGCTCT 21303096 Query 114331 CGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 114386 | || |||| || | || || || |||| || || || || || |||||| || Sbjct 21303097 CCACCTCCAGTGTGATGGTCTTACCAGTCAAGGTCTTGACGAAGATTTGCATGCCT 21303152 >seq3 Length=29132933 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| |||||||| | ||| || | || | |||||| || || || |||||||| ||| Sbjct 16258851 ATACCTCCACGTAGACGCAAGACAAGGTGAAGCGTAGACTCCTTCTGGATGTTGTAGTCG 16258910 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || ||| ||| || || || || || ||| ||||||||||||| || |||||| Sbjct 16258911 GCCAAGGTTCGACCATCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGA 16258970 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || ||||| ||||| ||||| ||| | | || | |||||||| | ||| Sbjct 16258971 GGGATCCCTTCCTTGTCCTGGATCTTGGCTTTCACGTTGTCGATGGTGTCGGAGCTTTCC 16259030 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || || || || |||||||| || || |||||||| Sbjct 16259031 ACCTCGAGGGTGATTGTCTTTCCCGTGAGAGTTTTCACGAAGATCTGCAT 16259080 Score = 125 bits (138), Expect = 6e-24 Identities = 167/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| || | ||| || || || | || || ||||| || |||||||| ||| Sbjct 9517349 ACCACCACGAAGACGCAACACCAAGTGAAGGGTCGACTCTTTCTGGATGTTGTAGTCGGC 9517290 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 | |||||| ||| || || || || |||||| |||||||||| || ||||||||||| Sbjct 9517289 TAAGGTACGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCCGGAGG 9517230 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||||||||| || || ||||| || | | |||| |||||| | | || || Sbjct 9517229 AATGCCTTCCTTATCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCAGAGCTCTCCAC 9517170 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 114386 |||| || | || |||||||| || || || ||||| ||||||||| || Sbjct 9517169 CTCCAGTGTGATGGTCTTGCCGGTAAGTGTCTTCACAAAGATCTGCATGCCT 9517118 Score = 114 bits (126), Expect = 1e-20 Identities = 163/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || || | || || || | || || || || || |||||||| || Sbjct 2324112 ATACCACCACGAAGCCTTAGCACCAAGTGAAGTGTTGACTCCTTCTGGATGTTGTAGTCA 2324171 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || ||| ||| ||||| || || |||||| ||||||||||||| ||||||||| Sbjct 2324172 GCCAAGGTGCGACCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGA 2324231 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT--TCAACGGTGTCGGTGGATT 114330 || |||||||| ||||| |||| || |||| ||||||| | | Sbjct 2324232 GGGATGCCTTCCTTGTCCTGGATCTNNNNNNNNNNACGTTGTCAATAGTGTCGGAGCTCT 2324291 Query 114331 CGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | || |||| || | || || ||||||| ||| || |||||||||||||| Sbjct 2324292 CCACCTCCAAAGTGATAGTCTTTCCGGTCAAAGTCTTGACAAAAATCTGCAT 2324343 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || || || | || || || || || ||||||||||| Sbjct 16258395 ATACCACCACGAAGACGGAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCA 16258454 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || ||| ||| || || || || |||||| ||||||||||||| ||||||||| Sbjct 16258455 GCCAAGGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGA 16258514 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || |||||||| ||||| ||||| ||| | | |||| || || | | || Sbjct 16258515 GGGATGCCTTCCTTGTCCTGGATCTTGGCTTTGACATTGTCAATAGTATCCGAGCTCTCC 16258574 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | || || || |||| ||| || ||||| |||||||| Sbjct 16258575 ACCTCCAAAGTAATAGTCTTTCCAGTCAAAGTCTTGACAAAGATCTGCAT 16258624 Score = 107 bits (118), Expect = 2e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATC- 114211 ||||| ||||| || | | || || || | || || || || || |||||||| || Sbjct 2316310 ATACCACCACGGAGACGGAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCT 2316369 Query 114212 GCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGG 114271 ||| | || ||| ||| || || || || |||||| ||||||||||||| || ||||| Sbjct 2316370 GCTAAG-GTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCCGG 2316428 Query 114272 AGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTC 114331 ||| |||||||| ||||| |||||| || | | |||| |||||| | | || Sbjct 2316429 AGGGATGCCTTCCTTGTCCTGAATCTTGGCCTTCACGTTGTCAATGGTGTCAGAGCTCTC 2316488 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || || ||||||| || || |||||||||||||| Sbjct 2316489 CACCTCAAGTGTGATGGTCTTACCGGTCAAGGTCTTCACAAAAATCTGCAT 2316539 Score = 107 bits (118), Expect = 2e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATC- 114211 ||||| ||||| || | | || || || | || || || || || |||||||| || Sbjct 2323884 ATACCACCACGGAGACGGAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCT 2323943 Query 114212 GCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGG 114271 ||| | || ||| ||| || || || || |||||| ||||||||||||| || ||||| Sbjct 2323944 GCTAAG-GTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCCGG 2324002 Query 114272 AGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTC 114331 ||| |||||||| ||||| |||||| || | | |||| |||||| | | || Sbjct 2324003 AGGGATGCCTTCCTTGTCCTGAATCTTGGCCTTCACGTTGTCAATGGTGTCAGAGCTCTC 2324062 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || || ||||||| || || |||||||||||||| Sbjct 2324063 CACCTCAAGTGTGATGGTCTTACCGGTCAAGGTCTTCACAAAAATCTGCAT 2324113 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | ||| || || || | |||||| ||||| || ||||| ||||| Sbjct 9517123 ATGCCTCCACGCAGACGCAACACCAAGTGAAGCGTAGACTCTTTCTGGATGTTATAATCA 9517064 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || | | || ||||| || || |||||| | || | | ||| ||||||||| Sbjct 9517063 GCCAATGTTCTACCGTCCTCAAGCTGCTTTCCAGCGAATATCAATCTCTGCTGGTCCGGA 9517004 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || || ||||| ||||| || | | || | |||||||| | || Sbjct 9517003 GGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCCCTCA 9516944 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | || || ||||||| ||| || ||||| |||||||| Sbjct 9516943 ACCTCCAAAGTAATGGTCTTTCCGGTCAAAGTCTTGACAAAGATCTGCAT 9516894 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 ||||| || || || |||||||| ||| | || || || || || || || || Sbjct 11118419 GTAGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCCTCCAGCTGCTTTCCG 11118478 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||| || ||||| ||||||||||| |||||||| ||||| ||||| || Sbjct 11118479 GCGAAGATCAGTCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTG 11118538 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | |||||||| ||| ||||| || | ||| | || || || || || ||| Sbjct 11118539 ACATTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATTGTCTTCCCCGTTAGGGTT 11118598 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 11118599 TTCACGAAGATCTGCAT 11118615 >seq1946 Length=8506 Score = 122 bits (134), Expect = 7e-23 Identities = 141/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 114193 CTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGA 114252 |||| || |||||||| || || ||| || |||||| || |||||||| ||| ||| Sbjct 2158 CTTTCTGGATGTTGTAGTCAGCCAAAGTGCGGCCATCTTCGAGCTGTTTACCGGCGAAGA 2099 Query 114253 TGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTT 114312 | |||||||| || |||||||| || ||||||||||| ||||| ||| | | | Sbjct 2098 TCAGACGCTGCTGATCCGGAGGGATACCTTCTTTGTCTTGGATCTTGGCTTTGACATTGT 2039 Query 114313 CAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 114372 | | |||||||| ||| ||||| || | || | || |||||||| || ||||| || | Sbjct 2038 CGATGGTGTCGGAGGACTCGACCTCGAGAGTGATGGTCTTGCCGGTTAGGGTTTTCACGA 1979 Query 114373 AAATCTGCAT 114382 | |||||||| Sbjct 1978 AGATCTGCAT 1969 >seq4 Length=50002108 Score = 122 bits (134), Expect = 7e-23 Identities = 141/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 114193 CTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGA 114252 |||| || |||||||| || || |||||| |||||| || |||||||| ||| ||| Sbjct 24965451 CTTTCTGGATGTTGTAGTCAGCCAAAGTACGGCCATCTTCGAGCTGTTTACCGGCGAAGA 24965392 Query 114253 TGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTT 114312 | |||||||| || |||||||| || ||||||||||| ||||| ||| | | | Sbjct 24965391 TCAGACGCTGCTGATCCGGAGGGATACCTTCTTTGTCTTGGATCTTGGCTTTGACATTGT 24965332 Query 114313 CAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 114372 | | |||||||| ||| ||||| || | || | || ||||| || || ||||| || | Sbjct 24965331 CGATGGTGTCGGAGGACTCGACCTCGAGAGTGATGGTCTTGCCCGTTAGGGTTTTCACGA 24965272 Query 114373 AAATCTGCAT 114382 | |||||||| Sbjct 24965271 AGATCTGCAT 24965262 Score = 104 bits (114), Expect = 2e-17 Identities = 137/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 114193 CTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGA 114252 |||| || |||||||| || || |||||| ||| || || |||||||| ||| ||| Sbjct 45703485 CTTTCTGGATGTTGTAGTCAGCCAAAGTACGGCCATCCTCGAGCTGTTTACCGGCGAAGA 45703426 Query 114253 TGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTT 114312 | | | ||| || |||||||| || ||||||||||| ||||| || | | | Sbjct 45703425 TCAATCTCTGCTGATCCGGAGGGATACCTTCTTTGTCTTGGATCTTGGCCTTGACATTGT 45703366 Query 114313 CAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 114372 | | |||||||| ||| ||||| || | ||| | || || ||||| || ||||| || | Sbjct 45703365 CGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTTCCGGTTAGGGTTTTCACGA 45703306 Query 114373 AAATCTGCAT 114382 | |||||||| Sbjct 45703305 AGATCTGCAT 45703296 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 114185 CGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACC 114244 ||| || || || || |||||||| ||| | || || || || || || || || Sbjct 49702157 CGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGTCCGTCCTCGAGCTGCTTTCC 49702098 Query 114245 AGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTT 114304 ||| | ||||| ||||| ||||||||||| |||||||| ||||| ||||| || Sbjct 49702097 GGCGAAAATGAGGCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCTTGGATCTTGGCCTT 49702038 Query 114305 TAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGT 114364 | | || | |||||||| ||| ||||| || | ||| | ||| || || || || || Sbjct 49702037 GACGTTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTTATCGTCTTCCCCGTTAGGGT 49701978 Query 114365 TTTTACAAAAATCTGCAT 114382 ||| || || |||||||| Sbjct 49701977 TTTCACGAAGATCTGCAT 49701960 >seq7 Length=27187321 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 114173 AACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTC 114232 ||| | ||| | || || || || || |||||||| ||| || ||||| ||| || Sbjct 640361 AACGAGATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTACGTCCATCCTC 640420 Query 114233 AAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGC 114292 || |||||||| ||| ||||||| | ||| |||||||||||||| ||||| ||||| Sbjct 640421 GAGCTGTTTACCGGCGAAGATGAGCCTCTGCTGGTCCGGAGGAATACCTTCCTTGTCCTG 640480 Query 114293 AATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTT 114352 ||||| || | | || | |||||||| | ||||| || | || | || || Sbjct 640481 GATCTTAGCCTTGACGTTATCGATGGTGTCGGAGCTCTCGACTTCGAGAGTGATGGTCTT 640540 Query 114353 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 |||||| |||||||| || ||||| ||||| Sbjct 640541 GCCGGTGAGAGTTTTCACGAAAATTTGCAT 640570 Score = 111 bits (122), Expect = 1e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || | ||| | |||||| ||||| |||||||||||||| Sbjct 639657 ATACCACCACGGAGACGAAGCACAAGATGCAGCGTAGACTCTTTCTGAATGTTGTAATCC 639716 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | |||||| ||||| || || || || ||| |||| || | |||||||| || Sbjct 639717 GCAAGAGTACGTCCGTCTTCTAGCTGCTTCCCGGCGAAGATAAGTCTTTGTTGGTCTGGT 639776 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || |||||||| ||||||| || | | || | ||||| | | || Sbjct 639777 GGGATACCCTCTTTGTCCTGAATCTTTGCCTTGACGTTATCGATCGTGTCAGAGCTCTCC 639836 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || |||| || | |||||||| || || || || ||||||||||||||| Sbjct 639837 ACCTCCAAAGTGATGGTTTTGCCAGTGAGGGTCTTCACAAAAATCTGCATG 639887 Score = 105 bits (116), Expect = 6e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || ||||| ||||||||||| || || ||| ||| ||| || || || || ||| Sbjct 456909 GTCGACTCTTTCTGAATGTTGTAGTCAGCCAAAGTGCGACCATCCTCTAGCTGCTTCCCA 456850 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || ||||||||||||| |||||||| || |||||||| ||||| ||| || ||| Sbjct 456849 GCAAAGATGAGACGCTGCTGGTCCGGTGGGATGCCTTCCTTGTCCTGAATTTTGGCTTTG 456790 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | |||| || ||| || || | || | || |||||||||| ||| Sbjct 456789 ACGTTGTCGATAGTGTTGGAACTTTCCACCTCAAGAGTGATGGTCTTGCCGGTCAAGGTT 456730 Query 114366 TTTACAAAAATCTGCATG 114383 || || || ||||||||| Sbjct 456729 TTGACGAAGATCTGCATG 456712 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 || ||||| || | | ||| || || | || || || ||||| || ||||| || Sbjct 639432 CCACCACGAAGACGAAGAACCAAGTGAAGAGTCGACTCCTTTTGGATATTGTAGTCAGCA 639491 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | || ||| ||| ||||| || ||||| ||| ||||||| | ||| || || || || Sbjct 639492 AGCGTGCGACCATCCTCAAGCTGCTTACCGGCGAAGATGAGTCTCTGCTGATCTGGTGGG 639551 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 || ||||| ||||| |||||| || | | || | ||||| | | || || Sbjct 639552 ATCCCTTCCTTGTCCTGAATCTTAGCCTTGACATTATCGATTGTGTCTGAGCTCTCAACC 639611 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 |||| || | ||||||||||| || || || |||||||||||||| Sbjct 639612 TCCAAAGTGATGGTTTTGCCGGTGAGGGTCTTAACAAAAATCTGCAT 639658 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 114179 ATGTATCGTAGATTCTTTTTGAATGTTGTAATC-GCTCATAGTACGAGAATCTTCAAGTT 114237 ||| | |||||| ||||| ||||||||||| || ||| | || || ||| || || | Sbjct 639911 ATGCAGCGTAGACTCTTTCTGAATGTTGTAGTCAGCT-AGCGTGCGTCCATCCTCCAGCT 639969 Query 114238 GTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCT 114297 | ||||| || ||||||| | ||| |||||||| || || || ||||| || |||| Sbjct 639970 GCTTACCGGCAAAGATGAGCCTCTGCTGGTCCGGTGGGATACCCTCTTTATCCTGGATCT 640029 Query 114298 TTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGG 114357 | || | | |||| |||||| | | || || |||| || | ||||| |||| Sbjct 640030 TAGCCTTGACGTTATCAATGGTGTCTGAGCTCTCAACCTCCAAAGTAATGGTTTTACCGG 640089 Query 114358 TCAGAGTTTTTACAAAAATCTGCAT 114382 | || || || ||||| || ||||| Sbjct 640090 TGAGGGTCTTGACAAAGATTTGCAT 640114 >seq5 Length=45943323 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 || ||||| || | | || | ||| | ||| || || || || |||||||| ||| Sbjct 32128068 CCACCACGGAGACGGAGGACGAGATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 32128009 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | ||| || ||||| || || || || ||| | || || ||||| ||||||||||| Sbjct 32128008 AGAGTGCGGCCGTCTTCCAGCTGCTTCCCGGCGAATATCAGTCGCTGCTGGTCCGGAGGG 32127949 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 || ||||| ||||| ||||| || | | || | |||||||| ||| ||||| Sbjct 32127948 ATCCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGACTCGACC 32127889 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | ||| | ||| || || || || ||||| || || |||||||| Sbjct 32127888 TCGAGGGTTATCGTCTTACCCGTTAGGGTTTTCACGAAGATCTGCAT 32127842 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | || |||| ||| | ||| | || || ||||| || |||||||| || Sbjct 16837805 ATACCTCCCCTTAACCTCAGAACAAGATGCAGAGTCGACTCTTTCTGGATGTTGTAGTCA 16837864 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || ||| ||| ||||| ||||| || | | |||| | | ||| || |||| Sbjct 16837865 GCCAAGGTGCGACCATCCTCAAGCTGTTTTCCGGTGAAGATCAACCTCTGCTGATCCGAT 16837924 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || ||||||||||| ||||| || | | || | |||||| || || Sbjct 16837925 GGGATTCCTTCTTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCACTGCTCTCC 16837984 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || ||||| ||||| ||||| || || |||||||| Sbjct 16837985 ACCTCGAGGGTGATGGTCTTGCCCGTCAGTGTTTTCACGAATATCTGCAT 16838034 >seq3342 Length=4839 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || |||||||| ||| | || || || || || || || || Sbjct 2596 GTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCCTCCAGCTGCTTCCCG 2655 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||| || ||||| ||||||||||| |||||||| ||||| ||||| || Sbjct 2656 GCGAAGATCAGTCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTG 2715 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | |||||||| ||| ||||| || | ||| | || || || || || ||| Sbjct 2716 ACATTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATTGTCTTCCCCGTTAGGGTT 2775 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 2776 TTCACGAAGATCTGCAT 2792 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420079734737712