Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raphanus_20sativus_20[refseq_20GCF_5F000801105.1_202015-09-29] 10,676 sequences; 426,614,037 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq9 132 5e-26 seq6 122 9e-23 seq7 116 4e-21 seq3342 109 6e-19 seq3 109 6e-19 seq5 107 2e-18 seq4 102 9e-17 seq1 82.4 8e-11 >seq9 Length=38354807 Score = 132 bits (146), Expect = 5e-26 Identities = 171/232 (74%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 |||||| | || ||||||||||||||| | || ||| |||||||| |||||||| || Sbjct 21327374 ACCTCCACGTAGACGCAACACCAAATGAAGAGTCGACTCTTTTTGAATGTTGTAATCTGC 21327433 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || ||| || | || || |||||||| |||||||| ||||| ||||||||||| | ||| Sbjct 21327434 CAAAGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGTGG 21327493 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCG---CTCGATT 42156 | | ||||||||| ||| || || | ||| | | | |||||| ||| | Sbjct 21327494 GATTCCCTCCTTGTCTTGGATCTTAGCCTTCA-CGTTGTCAATGGTGTCGGAACTC---T 21327549 Query 42157 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||| || | |||||||| || || || || ||||| || ||||| ||||| Sbjct 21327550 CCACCTCCAGAGTGATGGTCTTCCCGGTCAGTGTCTTAACGAAGATCTGCAT 21327601 Score = 118 bits (130), Expect = 1e-21 Identities = 165/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 ||||| | | |||||||||||| || | ||| ||||||||| |||||||| ||||| Sbjct 21327147 CCTCCACGCAGACGCAACACCAAGTGAAGTGTAGACTCCTTTTGGATATTGTAGTCAGCG 21327206 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 ||||||| |||| || |||||||| || || || || | | ||||||||| | || Sbjct 21327207 AGAGTCCTGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCTGGAGGG 21327266 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 42158 | | ||||||||| ||| || ||||| | | | ||||| |||| || Sbjct 21327267 ATACCCTCCTTGTCTTGGATCTTAGCTTTGACATTATCAATGGTGTCGGAGCTC---TCA 21327323 Query 42159 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || |||| ||||| || || || ||||| ||||| |||||||| ||||| Sbjct 21327324 ACTTCGAGGGTGATTGTCTTTCCGGTTAGTGTCTTGACAAAGATCTGCAT 21327373 Score = 113 bits (124), Expect = 5e-20 Identities = 152/208 (73%), Gaps = 8/208 (4%) Strand=Plus/Plus Query 42005 ATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTG 42064 |||||| || ||||||||| || ||||| ||||| ||||||| |||| || ||||| Sbjct 21303401 ATGCAAAGTTGACTCCTTTTGGATGTTGTAGTCAGCGAGAGTCCTGCCGTCTTCAAGCTG 21303460 Query 42065 CTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTT 42124 ||| || ||||| || | | ||||||||| | ||| | | |||||||||| ||| || Sbjct 21303461 CTTGCCTGCGAAGATCAACCTCTGCTGGTCCGGTGGGATCCCCTCCTTGTCCTGGATCTT 21303520 Query 42125 TTGTTTGAGCGTCGCC-ACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGC 42180 ||| | ||| | | | ||||| ||| |||||| |||| ||||| || || | Sbjct 21303521 AGCTTTAA-CGTTGTCGATGGTGTCTGAGCT---TTCCACCTCGAGGGTGATCGTCTTTC 21303576 Query 42181 CCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || || ||||| || ||||||||||| Sbjct 21303577 CGGTGAGAGTCTTAACGAAGATTTGCAT 21303604 Score = 111 bits (122), Expect = 2e-19 Identities = 161/221 (73%), Gaps = 10/221 (5%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| |||||||| || | || ||| || ||||| ||||||||||||| || || | Sbjct 21315358 ACGTAACACCAAGTGAAGGGTTGACTCTTTCTGAATGTTGTAATCAGCCAAGGTGCGACC 21315417 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || |||||||| |||||||| ||||| ||||||||||| | ||| | | |||||| Sbjct 21315418 ATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGGATCCCCTCCTT 21315477 Query 42113 GTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACC 42167 |||| ||| | || | |||| ||| | | | ||||| |||| ||||| || | Sbjct 21315478 GTCC-TGAATCTTGGCCTTGA-CGTTGTCAATGGTGTCGGAGCTC---TCCACCTCCAAA 21315532 Query 42168 GTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||| || || || || || ||||| | ||| || ||||| Sbjct 21315533 GTGATAGTCTTCCCGGTCAGTGTCTTAATAAAAATCTGCAT 21315573 Score = 105 bits (116), Expect = 7e-18 Identities = 162/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 ||||| | | |||||||||||| || | ||| ||||||||| |||||||| ||||| Sbjct 21303150 CCTCCACGCAGACGCAACACCAAGTGAAGTGTAGACTCCTTTTGGATATTGTAGTCAGCG 21303209 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 ||||||| |||| || |||||||| || || || || | | ||||||||| | || Sbjct 21303210 AGAGTCCTGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCTGGAGGG 21303269 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 42158 | | ||||||||| ||| || ||||| | | | ||||| |||| ||| Sbjct 21303270 ATACCCTCCTTGTCTTGGATCTTAGCTTTGACATTATCAATGGTGTCGGAGCTC---TCC 21303326 Query 42159 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || | || ||||| ||||| || | ||||| || || || ||||| Sbjct 21303327 ACCTCCAAAGTAATGGTCTTGCCGGTCAATGTCTTAACGAAAATCTGCAT 21303376 Score = 95.1 bits (104), Expect = 1e-14 Identities = 153/219 (70%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 |||||||||||| || | || |||||| || || ||||| || || || || || | Sbjct 21302933 ACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTGCGACC 21302992 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || |||||||| |||||||| ||||| |||||||| || | || | | ||||| Sbjct 21302993 ATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCTGGAGGGATCCCTTCCTT 21303052 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGT 42169 ||| ||| || ||| | | | | ||||| |||| ||||| || | || Sbjct 21303053 GTCTTGGATCTTGGCTTTCACATTATCAATGGTGTCCGAGCTC---TCCACCTCCAGTGT 21303109 Query 42170 GATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||||| || || || | ||||| || ||||||||||| Sbjct 21303110 GATGGTCTTACCAGTCAAGGTCTTGACGAAGATTTGCAT 21303148 Score = 95.1 bits (104), Expect = 1e-14 Identities = 153/219 (70%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 |||||||||||| || | || |||||| || || ||||| || || || || || | Sbjct 21326930 ACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTGCGACC 21326989 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || |||||||| |||||||| ||||| |||||||| || | || | | ||||| Sbjct 21326990 ATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCTGGAGGGATCCCTTCCTT 21327049 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGT 42169 ||| ||| || ||| | | | | ||||| |||| ||||| || | || Sbjct 21327050 GTCTTGGATCTTGGCTTTCACGTTATCAATGGTGTCCGAGCTC---TCCACCTCCAGTGT 21327106 Query 42170 GATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||||| || || || | ||||| |||||||| ||||| Sbjct 21327107 GATGGTCTTACCAGTCAAGGTCTTGACAAAGATCTGCAT 21327145 >seq6 Length=53636577 Score = 122 bits (134), Expect = 9e-23 Identities = 167/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 |||||||| | || | |||||| || | || |||||| || || ||||| || || Sbjct 30640175 CCTCCTCTCAGGCGGAGCACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCG 30640116 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || |||| | |||| || |||||||| || ||||| || || ||||||||||| | ||| Sbjct 30640115 AGCGTCCTCCCGTCTTCGAGCTGCTTCCCGGCGAAGATCAGACGCTGCTGGTCCGGTGGG 30640056 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | | ||||||||| ||| | || | |||| | | | ||||||| ||||| || Sbjct 30640055 ATCCCTTCCTTGTCC-TGAATCTTGGCCTTGACATTGTCGATCGTGTCGGATGATTCGAC 30639997 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 42211 || | || || || || |||||||| || || |||||||| |||||||| Sbjct 30639996 CTCTAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCATTTT 30639946 >seq7 Length=27187321 Score = 116 bits (128), Expect = 4e-21 Identities = 160/220 (73%), Gaps = 8/220 (4%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | ||| | ||||| || ||| || ||||| |||||||| || ||||| || | Sbjct 639671 ACGAAGCACAAGATGCAGCGTAGACTCTTTCTGAATGTTGTAATCCGCAAGAGTACGTCC 639730 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 ||| ||||||||||| || ||||| || |||| || ||||| | ||| | | ||| || Sbjct 639731 GTCTTCTAGCTGCTTCCCGGCGAAGATAAGTCTTTGTTGGTCTGGTGGGATACCCTCTTT 639790 Query 42113 GTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCG 42168 |||| ||| | |||| |||| | | | |||||| |||| ||||| || | | Sbjct 639791 GTCC-TGAATCTTTGCCTTGACGTTATCGATCGTGTCAGAGCTC---TCCACCTCCAAAG 639846 Query 42169 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||||||||||| || || ||||| ||||| || ||||| Sbjct 639847 TGATGGTTTTGCCAGTGAGGGTCTTCACAAAAATCTGCAT 639886 Score = 114 bits (126), Expect = 1e-20 Identities = 145/194 (75%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||| || ||||| ||||| ||||||| ||| || | || ||||||||||| ||||| || Sbjct 456904 CTCTTTCTGAATGTTGTAGTCAGCCAAAGTGCGACCATCCTCTAGCTGCTTCCCAGCAAA 456845 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 ||||| ||||||||||| | ||| | || ||||||||| ||| |||| | ||||| || Sbjct 456844 GATGAGACGCTGCTGGTCCGGTGGGATGCCTTCCTTGTCC-TGAATTTTGGCTTTGA-CG 456787 Query 42136 TCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 42194 | | | | |||| | |||||| || | |||||||| ||||| || | || || Sbjct 456786 TTGTCGATAGTGTTGGAACTTTCCACCTCAAGAGTGATGGTCTTGCCGGTCAAGGTTTTG 456727 Query 42195 ACAAAGATTTGCAT 42208 || ||||| ||||| Sbjct 456726 ACGAAGATCTGCAT 456713 Score = 109 bits (120), Expect = 6e-19 Identities = 144/196 (73%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||||||||| |||||||| ||||| || || || | || || ||||||||||| ||||| Sbjct 639467 CTCCTTTTGGATATTGTAGTCAGCAAGCGTGCGACCATCCTCAAGCTGCTTACCGGCGAA 639526 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 ||||||| |||||| || | ||| | | ||||||||| ||| | || | |||| Sbjct 639527 GATGAGTCTCTGCTGATCTGGTGGGATCCCTTCCTTGTCC-TGAATCTTAGCCTTGACAT 639585 Query 42136 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | ||||| |||| || || || | |||||||||||||| || || |||| Sbjct 639586 TATCGATTGTGTCTGAGCTC---TCAACCTCCAAAGTGATGGTTTTGCCGGTGAGGGTCT 639642 Query 42193 TTACAAAGATTTGCAT 42208 | ||||| || ||||| Sbjct 639643 TAACAAAAATCTGCAT 639658 Score = 109 bits (120), Expect = 6e-19 Identities = 141/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || || || || |||| || ||||| || || ||||| Sbjct 17979960 CTCCTTCTGGATGTTGTAGTCGGCGAGTGTGCGGCCGTCTTCCAGCTGTTTCCCGGCGAA 17980019 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || |||||||||||||| | ||| | | ||||||||| ||| || ||||| | Sbjct 17980020 GATCAGTCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCCTGGATCTTGGCTTTGACATT 17980079 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | |||||| ||||| || |||| ||||| || || |||||||| || || || Sbjct 17980080 GTCGATGGTGTCGGATGATTCGACCTCGAGGGTGATCGTCTTCCCCGTTAGGGTTTTCAC 17980139 Query 42197 AAAGATTTGCATTTT 42211 ||||| ||||| || Sbjct 17980140 GAAGATCTGCATCTT 17980154 Score = 109 bits (120), Expect = 6e-19 Identities = 141/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || || || || |||| || ||||| || || ||||| Sbjct 18014086 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCTTCCAGCTGTTTCCCGGCGAA 18014145 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || |||||||||||||| | ||| | | |||||||||| ||| || |||| | Sbjct 18014146 GATCAGTCGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 18014205 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | |||||| ||||| || |||| ||||| || || |||||||| || || || Sbjct 18014206 GTCGATGGTGTCGGATGATTCGACCTCGAGGGTGATTGTCTTCCCCGTTAGGGTTTTCAC 18014265 Query 42197 AAAGATTTGCATTTT 42211 ||||| ||||| || Sbjct 18014266 GAAGATCTGCATCTT 18014280 Score = 96.9 bits (106), Expect = 4e-15 Identities = 160/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || ||||| | || | ||| | ||||| || ||| || ||||| ||||| ||||| Sbjct 639888 CCACCTCTGAGTCGAAGCACAAGATGCAGCGTAGACTCTTTCTGAATGTTGTAGTCAGCT 639947 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || || | || || ||||||||||| || || ||||| | ||||||||| | ||| Sbjct 639948 AGCGTGCGTCCATCCTCCAGCTGCTTACCGGCAAAGATGAGCCTCTGCTGGTCCGGTGGG 640007 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 42158 | | ||| || ||| ||| || |||| | | | ||||| |||| || Sbjct 640008 ATACCCTCTTTATCCTGGATCTTAGCCTTGACGTTATCAATGGTGTCTGAGCTC---TCA 640064 Query 42159 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || | || |||||||| || || || ||||| |||||||||||||| Sbjct 640065 ACCTCCAAAGTAATGGTTTTACCGGTGAGGGTCTTGACAAAGATTTGCAT 640114 Score = 82.4 bits (90), Expect = 8e-11 Identities = 136/195 (70%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| ||||| || || || | || || |||||||||||||| || Sbjct 640151 CTCCTTCTGGATGTTGTAGTCAGCGAGCGTGCGACCATCCTCCAGCTGCTTACCAGCAAA 640210 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || || | |||||| || | || | || ||||||||| || || |||| | Sbjct 640211 AATAAGCCTCTGCTGATCCGGAGGGATGCCTTCCTTGTCCTGTATCTTCGCCTTGACATT 640270 Query 42137 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | ||||| |||| || || |||| |||||||| || ||||| | ||||| Sbjct 640271 GTCAATAGTGTCGGAGCTC---TCAACCTCGAGAGTGATGGTCTTTCCCGTCAAAGTCTT 640327 Query 42194 TACAAAGATTTGCAT 42208 || ||||| ||||| Sbjct 640328 GACGAAGATCTGCAT 640342 >seq3342 Length=4839 Score = 109 bits (120), Expect = 6e-19 Identities = 141/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || || || ||| |||| || |||||||| || ||||| Sbjct 2601 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCCTCCAGCTGCTTCCCGGCGAA 2660 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || |||||||||||||| | || | || ||||||||| ||| || |||| | Sbjct 2661 GATCAGTCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATT 2720 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | |||||| || || || |||| ||||| || || |||||||| || || || Sbjct 2721 GTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATTGTCTTCCCCGTTAGGGTTTTCAC 2780 Query 42197 AAAGATTTGCATTTT 42211 ||||| ||||| || Sbjct 2781 GAAGATCTGCATCTT 2795 >seq3 Length=29132933 Score = 109 bits (120), Expect = 6e-19 Identities = 141/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || || || ||| |||| || |||||||| || ||||| Sbjct 11118424 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCCTCCAGCTGCTTTCCGGCGAA 11118483 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || |||||||||||||| | || | || ||||||||| ||| || |||| | Sbjct 11118484 GATCAGTCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATT 11118543 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | |||||| || || || |||| ||||| || || |||||||| || || || Sbjct 11118544 GTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATTGTCTTCCCCGTTAGGGTTTTCAC 11118603 Query 42197 AAAGATTTGCATTTT 42211 ||||| ||||| || Sbjct 11118604 GAAGATCTGCATCTT 11118618 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 ||||| | | |||||||||||| || | || ||| || || || || ||||||||| Sbjct 9517120 CCTCCACGCAGACGCAACACCAAGTGAAGCGTAGACTCTTTCTGGATGTTATAATCAGCC 9517061 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 | || | |||| || |||||||| ||||||||||| | || ||||||||| | || Sbjct 9517060 AATGTTCTACCGTCCTCAAGCTGCTTTCCAGCGAATATCAATCTCTGCTGGTCCGGAGGG 9517001 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 42160 | | |||||||||| ||| || |||| ||| | | | |||||| || || Sbjct 9517000 ATACCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCGGAGCCCTCAAC 9516942 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | || ||||| || || || | ||||| |||||||| ||||| Sbjct 9516941 CTCCAAAGTAATGGTCTTTCCGGTCAAAGTCTTGACAAAGATCTGCAT 9516894 Score = 98.7 bits (108), Expect = 1e-15 Identities = 154/219 (70%), Gaps = 6/219 (3%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 |||||||||||| || | || ||| || || || ||||| || || | || || | Sbjct 9517337 ACGCAACACCAAGTGAAGGGTCGACTCTTTCTGGATGTTGTAGTCGGCTAAGGTACGACC 9517278 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || |||||||| |||||||| ||||| || |||||||| | || | || ||||| Sbjct 9517277 ATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCCGGAGGAATGCCTTCCTT 9517218 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGT 42169 ||| ||| || |||| | | | ||||| |||| ||||| || | || Sbjct 9517217 ATCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCAGAGCTC---TCCACCTCCAGTGT 9517161 Query 42170 GATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||||| ||||| || || ||||| |||||||| ||||| Sbjct 9517160 GATGGTCTTGCCGGTAAGTGTCTTCACAAAGATCTGCAT 9517122 Score = 96.9 bits (106), Expect = 4e-15 Identities = 139/195 (71%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||||||||||| || || | || || |||||||| |||||||| Sbjct 16258433 CTCCTTCTGGATGTTGTAATCAGCCAAGGTGCGACCATCCTCGAGCTGCTTTCCAGCGAA 16258492 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | || | || ||||||||| ||| || ||||| | Sbjct 16258493 GATGAGACGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCTTTGACATT 16258552 Query 42137 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | || || |||| ||||| || | || || || || || || | ||||| Sbjct 16258553 GTCAATAGTATCCGAGCTC---TCCACCTCCAAAGTAATAGTCTTTCCAGTCAAAGTCTT 16258609 Query 42194 TACAAAGATTTGCAT 42208 |||||||| ||||| Sbjct 16258610 GACAAAGATCTGCAT 16258624 Score = 87.8 bits (96), Expect = 2e-12 Identities = 90/118 (76%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 41999 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 42058 |||||| || | ||| |||||| || || ||||| ||||||| || || | || || Sbjct 2324132 CACCAAGTGAAGTGTTGACTCCTTCTGGATGTTGTAGTCAGCCAAGGTGCGACCATCCTC 2324191 Query 42059 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCC 42116 |||||||| |||||||| ||||| ||||||||||| | || | || ||||||||| Sbjct 2324192 AAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCC 2324249 Score = 86.0 bits (94), Expect = 7e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| || | || |||||||||||| || | || |||||| || || ||||| || || Sbjct 2316777 ACCACCACGTAGACGCAACACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCTGC 2316836 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 ||||||| | || || |||||||| || || || || || | |||||| || | || Sbjct 2316837 TAGAGTCCTTCCATCCTCAAGCTGCTTCCCGGCAAAGATAAGCCTCTGCTGATCCGGAGG 2316896 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCA 42159 | || ||||| ||| || | || | | | ||| | | | |||||| ||||| Sbjct 2316897 GATGCCTTCCTTATCC-TGGATCTTGGCCTTAACGTTGTCGATGGTGTCGGAGCTTTCCA 2316955 Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | |||| |||||||| || || || || || || || || || ||||| Sbjct 2316956 CCTCGAGGGTGATGGTCTTTCCTGTGAGAGTTTTCACGAATATCTGCAT 2317004 Score = 86.0 bits (94), Expect = 7e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| || | || |||||||||||| || | || |||||| || || ||||| || || Sbjct 2324572 ACCACCACGTAGACGCAACACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCTGC 2324631 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 ||||||| | || || |||||||| || || || || || | |||||| || | || Sbjct 2324632 TAGAGTCCTTCCATCCTCAAGCTGCTTCCCGGCAAAGATAAGCCTCTGCTGATCCGGAGG 2324691 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCA 42159 | || ||||| ||| || | || | | | ||| | | | |||||| ||||| Sbjct 2324692 GATGCCTTCCTTATCC-TGGATCTTGGCCTTAACGTTGTCGATGGTGTCGGAGCTTTCCA 2324750 Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | |||| |||||||| || || || || || || || || || ||||| Sbjct 2324751 CCTCGAGGGTGATGGTCTTTCCTGTGAGAGTTTTCACGAATATCTGCAT 2324799 >seq5 Length=45943323 Score = 107 bits (118), Expect = 2e-18 Identities = 143/196 (73%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || ||||| || |||| || |||||||| || ||||| Sbjct 32128033 CTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGGCCGTCTTCCAGCTGCTTCCCGGCGAA 32127974 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||| |||||||||||||| | || | | ||||||||| ||| || |||| ||| Sbjct 32127973 TATCAGTCGCTGCTGGTCCGGAGGGATCCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGT 32127915 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | |||||| || || || |||| || || || || |||||||| || || | Sbjct 32127914 TGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTTATCGTCTTACCCGTTAGGGTTTTCA 32127855 Query 42196 CAAAGATTTGCATTTT 42211 | ||||| ||||| || Sbjct 32127854 CGAAGATCTGCATCTT 32127839 >seq4 Length=50002108 Score = 102 bits (112), Expect = 9e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 |||||||| | ||| | |||| || | || |||||| || || ||||| || || Sbjct 49702186 CCTCCTCTCAGACGGAGAACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 49702127 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || || |||| || |||||||| || ||||| ||||| ||||||||||| | || Sbjct 49702126 AGGGTGCGTCCGTCCTCGAGCTGCTTTCCGGCGAAAATGAGGCGCTGCTGGTCCGGAGGG 49702067 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 42160 | || |||||||| ||| || |||| ||| | | | |||||| || || || Sbjct 49702066 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCGGAGGACTCGAC 49702008 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||| || || || || |||||||| || || || ||||| ||||| Sbjct 49702007 CTCGAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 49701960 Score = 93.3 bits (102), Expect = 5e-14 Identities = 136/191 (71%), Gaps = 1/191 (1%) Strand=Plus/Minus Query 42019 CCTTT-TGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || || ||||| ||||||| ||| || | || || ||||| ||||| ||||| Sbjct 24965452 CCTTTCTGGATGTTGTAGTCAGCCAAAGTACGGCCATCTTCGAGCTGTTTACCGGCGAAG 24965393 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || || |||||||| || | || | | || ||||| ||| || ||||| | Sbjct 24965392 ATCAGACGCTGCTGATCCGGAGGGATACCTTCTTTGTCTTGGATCTTGGCTTTGACATTG 24965333 Query 42138 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197 | | |||||| || || || |||| |||||||| ||||||||||| || || || Sbjct 24965332 TCGATGGTGTCGGAGGACTCGACCTCGAGAGTGATGGTCTTGCCCGTTAGGGTTTTCACG 24965273 Query 42198 AAGATTTGCAT 42208 ||||| ||||| Sbjct 24965272 AAGATCTGCAT 24965262 >seq1 Length=26309735 Score = 82.4 bits (90), Expect = 8e-11 Identities = 85/109 (78%), Gaps = 2/109 (2%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || |||||||| || || |||| |||| || |||||||| || ||||| Sbjct 10591943 CTCCTTCTGGATGTTGTAATCCGCGAGCGTCCTTCCGTCCTCCAGCTGCTTCCCGGCGAA 10591884 Query 42077 TATGAGTCGCTGCTGGT-CGGCTGGCACGCTCTCCTTGTCCATGATTTT 42124 || ||||||||||||| |||| || | || ||||||||| ||| || Sbjct 10591883 GATCAGTCGCTGCTGGTCCGGCGGGATCCCT-TCCTTGTCCTGGATCTT 10591836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543140308251840