Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raphanus_20sativus_20[refseq_20GCF_5F000801105.1_202015-09-29] 10,676 sequences; 426,614,037 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq9 152 5e-32 seq3 143 3e-29 seq7 127 2e-24 seq5 125 7e-24 seq1946 104 2e-17 seq4 95.1 1e-14 >seq9 Length=38354807 Score = 152 bits (168), Expect = 5e-32 Identities = 172/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 || || |||| |||||||||||||| | || |||||||||||||| |||||||| || Sbjct 21327375 CCTCCACGTAGACGCAACACCAAATGAAGAGTCGACTCTTTTTGAATGTTGTAATCTGCC 21327434 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || ||||| ||||||||| |||| | |||||||| || || || Sbjct 21327435 AAAGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGG 21327494 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || ||||||||||| ||| || ||| | |||| || | |||||| | |||||| || Sbjct 21327495 ATTCCCTCCTTGTCTTGGATCTTAGCCTTCACGTTG-TCAATGGTGTCGGAACTCTCCAC 21327553 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || || |||||||| || || || || |||||||| Sbjct 21327554 CTCCAGAGTGATGGTCTTCCCGGTCAGTGTCTTAACGAAGATCTGCAT 21327601 Score = 141 bits (156), Expect = 9e-29 Identities = 169/227 (74%), Gaps = 2/227 (1%) Strand=Plus/Plus Query 126888 CACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCA 126947 ||||||| | || |||||||| || | || |||||||| ||||| |||||||| ||| Sbjct 21315348 CACCGCGCAGACGTAACACCAAGTGAAGGGTTGACTCTTTCTGAATGTTGTAATCAGCCA 21315407 Query 126948 TCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTA 127007 |||||| ||| || ||||| || |||||| |||| | |||||||| || || || | Sbjct 21315408 AGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGGA 21315467 Query 127008 TGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACT 127066 | |||||||||||| || || ||||| |||| || | |||||| | ||||| || Sbjct 21315468 TCCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTG-TCAATGGTGTCGGAGCTCTCCACC 21315526 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || || |||||||| || || | |||||||||||| Sbjct 21315527 TCCAAAGTGATAGTCTTCCCGGTCAGTGTCTTAATAAAAATCTGCAT 21315573 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | ||||||||||| || | || ||||| || || || ||||| ||| | Sbjct 21326919 CCACCACGGAGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCT 21326978 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || ||||| ||||||||| |||| | ||||||||||| ||||| Sbjct 21326979 AGGGTGCGACCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCTGGAGGG 21327038 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || || |||||||| ||| || || | | || | |||||||| ||||| || Sbjct 21327039 ATCCCTTCCTTGTCTTGGATCTTGGCTTTCACGTTATCAATGGTGTCCGAGCTCTCCACC 21327098 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117 || | || | || || || |||| || || ||||| ||||||||| || Sbjct 21327099 TCCAGTGTGATGGTCTTACCAGTCAAGGTCTTGACAAAGATCTGCATGCCT 21327149 Score = 122 bits (134), Expect = 8e-23 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 ||||||||||| || | |||||||| ||||| |||||||| || | | || | Sbjct 21327159 CGCAACACCAAGTGAAGTGTAGACTCCTTTTGGATATTGTAGTCAGCGAGAGTCCTGCCG 21327218 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| ||||| || ||||||| | |||||| || ||||| || ||||||||| Sbjct 21327219 TCCTCGAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCTGGAGGGATACCCTCCTTG 21327278 Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078 || ||| || |||| | || | |||||| | ||||| ||||||| ||| | Sbjct 21327279 TCTTGGATCTTAGCTTTGACATTATCAATGGTGTCGGAGCTCTCAACTTCGAGGGTGATT 21327338 Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || ||||| || || || ||||| |||||||| Sbjct 21327339 GTCTTTCCGGTTAGTGTCTTGACAAAGATCTGCAT 21327373 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | ||||||||||| || | || ||||| || || || ||||| ||| | Sbjct 21302922 CCACCACGGAGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCT 21302981 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || ||||| ||||||||| |||| | ||||||||||| ||||| Sbjct 21302982 AGGGTGCGACCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCTGGAGGG 21303041 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || || |||||||| ||| || || | | || | |||||||| ||||| || Sbjct 21303042 ATCCCTTCCTTGTCTTGGATCTTGGCTTTCACATTATCAATGGTGTCCGAGCTCTCCACC 21303101 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117 || | || | || || || |||| || || || || || |||||| || Sbjct 21303102 TCCAGTGTGATGGTCTTACCAGTCAAGGTCTTGACGAAGATTTGCATGCCT 21303152 Score = 113 bits (124), Expect = 4e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 ||||||||||| || | |||||||| ||||| |||||||| || | | || | Sbjct 21303162 CGCAACACCAAGTGAAGTGTAGACTCCTTTTGGATATTGTAGTCAGCGAGAGTCCTGCCG 21303221 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| ||||| || ||||||| | |||||| || ||||| || ||||||||| Sbjct 21303222 TCCTCGAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCTGGAGGGATACCCTCCTTG 21303281 Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078 || ||| || |||| | || | |||||| | ||||| || || | || | Sbjct 21303282 TCTTGGATCTTAGCTTTGACATTATCAATGGTGTCGGAGCTCTCCACCTCCAAAGTAATG 21303341 Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || |||||||||| || || || ||||||||||| Sbjct 21303342 GTCTTGCCGGTCAATGTCTTAACGAAAATCTGCAT 21303376 Score = 102 bits (112), Expect = 8e-17 Identities = 144/199 (72%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || |||||||| || ||| || | || || ||||| ||||| Sbjct 21328089 GTCGACTCCTTCTGGATATTGTAGTCAGCCAAGGTTCTGCCGTCCTCGAGCTGCTTTCCG 21328148 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | | ||||||||| || || ||||||||||||||| ||| || |||| Sbjct 21328149 GCGAAGATAAGCCTCTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTT-GGCTTT 21328207 Query 127037 A--GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAG 127094 | |||| |||| |||||| | || || || || | ||| | || || ||||| |||| Sbjct 21328208 AACGTTG-TCGATGGTGTCTGAGCTTTCCACCTCAAGGGTGATTGTCTTTCCGGTGAGAG 21328266 Query 127095 TTTTTACAAAAATCTGCAT 127113 | || || || |||||||| Sbjct 21328267 TCTTAACGAATATCTGCAT 21328285 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/199 (72%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| ||||| || ||||| || | | || | || || ||||| || || Sbjct 21303408 GTTGACTCCTTTTGGATGTTGTAGTCAGCGAGAGTCCTGCCGTCTTCAAGCTGCTTGCCT 21303467 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| ||||||| | |||||| || || || || |||||||||||| ||| || |||| Sbjct 21303468 GCGAAGATCAACCTCTGCTGGTCCGGTGGGATCCCCTCCTTGTCCTGGATCTT-AGCTTT 21303526 Query 127037 A--GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAG 127094 | |||| |||| |||||| | || || || |||| ||| | ||| || ||||| |||| Sbjct 21303527 AACGTTG-TCGATGGTGTCTGAGCTTTCCACCTCGAGGGTGATCGTCTTTCCGGTGAGAG 21303585 Query 127095 TTTTTACAAAAATCTGCAT 127113 | || || || || ||||| Sbjct 21303586 TCTTAACGAAGATTTGCAT 21303604 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/216 (69%), Gaps = 14/216 (6%) Strand=Plus/Plus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 ||||||||||| || | |||||||| |||||||| ||||| | || || | | || Sbjct 21315818 CGCAACACCAAGTGAAGTGTAGACTCCTTTTGAATGTTGTAGT----CAGCGAGAGTGAT 21315873 Query 126959 TC-GTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTT 127017 | | | ||||| ||||| || ||| ||| | |||||| || ||||| |||||||| || Sbjct 21315874 CCTGCCGAGCTGCTTTCCGGCAAAGACCAACCTCTGCTGGTCTGGAGGAATGCCCTCTTT 21315933 Query 127018 GTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077 || | ||| | | |||| | ||| | || | ||||| || || | || | Sbjct 21315934 GT-CTTGAATCTTGGCTTTA--------ACGTTATCTGAGCTCTCCACCTCCAAAGTAAT 21315984 Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || ||||| || ||||| || || |||||||| Sbjct 21315985 AGTCTTTCCGGTTAGGGTTTTGACGAAGATCTGCAT 21316020 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||||||||| || ||||| || | | | || ||| || || || || || Sbjct 21316052 GTCGACTCTTTTTGGATGTTGTAGTCAGCGAGAGCACGCCCATCTTCAAGTTGCTTCCCG 21316111 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | | |||| |||| || || ||||| ||||||||| ||| | | |||| Sbjct 21316112 GCGAAGATAAGCCTCTGCCGATCCGGGGGAATGCCTTCCTTGTCC-TGAATCTTCGCTTT 21316170 Query 127037 A--GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAG 127094 | |||| |||| |||||| | || || || |||| ||| | || || || || |||| Sbjct 21316171 AACGTTG-TCGATGGTGTCTGAGCTTTCCACCTCGAGGGTGATTGTCTTTCCCGTGAGAG 21316229 Query 127095 TTTTTACAAAAATCTGCAT 127113 | || || || |||||||| Sbjct 21316230 TCTTAACGAATATCTGCAT 21316248 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 ||||| || | || ||||| || || || ||||| || | | || | || || Sbjct 21327849 ACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGAGTTCTGCCGTCTTCA 21327908 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 ||||| || || || ||||||| | |||||| || || || || |||||||||||| | Sbjct 21327909 AGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGGATCCCCTCCTTGTCCTGG 21327968 Query 127025 ATTTTCTGCTT--GAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTT 127082 || || ||||| |||| || | |||||| | ||||| || || | ||| | |||| Sbjct 21327969 ATCTT-TGCTTTCACGTTG-TCAATGGTGTCGGAGCTCTCCACCTCTAGGGTAATAGTTT 21328026 Query 127083 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | || |||| || || || || |||||||| Sbjct 21328027 TTCCCGTCAAGGTCTTAACGAAGATCTGCAT 21328057 >seq3 Length=29132933 Score = 143 bits (158), Expect = 3e-29 Identities = 163/216 (75%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 ||||||||||| || | |||||||||||| || || || ||||| ||| || | | Sbjct 9517108 CGCAACACCAAGTGAAGCGTAGACTCTTTCTGGATGTTATAATCAGCCAATGTTCTACCG 9517049 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| ||||||||| | ||||||| |||||| || ||||| || ||||||||| Sbjct 9517048 TCCTCAAGCTGCTTTCCAGCGAATATCAATCTCTGCTGGTCCGGAGGGATACCCTCCTTG 9516989 Query 127019 TCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077 ||| ||| || ||||| |||| |||| |||||| | | ||| || || | || | Sbjct 9516988 TCCTGGATCTTGGCCTTGACGTTG-TCGATGGTGTCGGAGCCCTCAACCTCCAAAGTAAT 9516930 Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || ||||||| ||| || ||||| |||||||| Sbjct 9516929 GGTCTTTCCGGTCAAAGTCTTGACAAAGATCTGCAT 9516894 Score = 132 bits (146), Expect = 5e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | ||||||||||| || | || |||||||| || || ||||| ||| | Sbjct 9517348 CCACCACGAAGACGCAACACCAAGTGAAGGGTCGACTCTTTCTGGATGTTGTAGTCGGCT 9517289 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || ||| ||| || ||||| ||||||||| |||| | || ||||| || ||||| Sbjct 9517288 AAGGTACGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCCGGAGGA 9517229 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||| ||||| ||| ||| || ||||| | || | |||||| | ||||| || Sbjct 9517228 ATGCCTTCCTTATCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCAGAGCTCTCCACC 9517169 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117 || | || | || |||||||| || || || ||||| ||||||||| || Sbjct 9517168 TCCAGTGTGATGGTCTTGCCGGTAAGTGTCTTCACAAAGATCTGCATGCCT 9517118 Score = 129 bits (142), Expect = 6e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 || || |||| ||||| || | || | ||||||||| || || || ||||| ||| || Sbjct 16258854 CCTCCACGTAGACGCAAGACAAGGTGAAGCGTAGACTCCTTCTGGATGTTGTAGTCGGCC 16258913 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || ||| ||| || ||||| ||||| ||| |||| | ||||||||||| ||||| Sbjct 16258914 AAGGTTCGACCATCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGAGGG 16258973 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || ||||||||| ||| || || | |||| |||| |||||| | || || || Sbjct 16258974 ATCCCTTCCTTGTCCTGGATCTTGGCTTTCACGTTG-TCGATGGTGTCGGAGCTTTCCAC 16259032 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| ||| | || || || || |||||||| || || |||||||| Sbjct 16259033 CTCGAGGGTGATTGTCTTTCCCGTGAGAGTTTTCACGAAGATCTGCAT 16259080 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | || ||||| || || || ||||| || | Sbjct 2316313 CCACCACGGAGACGGAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCTGCT 2316372 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || ||||| ||||||||| |||| | ||||||||||| ||||| Sbjct 2316373 AAGGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCCGGAGGG 2316432 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||| ||||||||| || || ||| | |||| || | |||||| | ||||| || Sbjct 2316433 ATGCCTTCCTTGTCCTGAATCTTGGCCTTCACGTTG-TCAATGGTGTCAGAGCTCTCCAC 2316491 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || || ||||||| || || |||||||||||||| Sbjct 2316492 CTCAAGTGTGATGGTCTTACCGGTCAAGGTCTTCACAAAAATCTGCAT 2316539 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | || ||||| || || || ||||| || | Sbjct 2323887 CCACCACGGAGACGGAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCTGCT 2323946 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || ||||| ||||||||| |||| | ||||||||||| ||||| Sbjct 2323947 AAGGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCCGGAGGG 2324006 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||| ||||||||| || || ||| | |||| || | |||||| | ||||| || Sbjct 2324007 ATGCCTTCCTTGTCCTGAATCTTGGCCTTCACGTTG-TCAATGGTGTCAGAGCTCTCCAC 2324065 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || || ||||||| || || |||||||||||||| Sbjct 2324066 CTCAAGTGTGATGGTCTTACCGGTCAAGGTCTTCACAAAAATCTGCAT 2324113 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| |||| ||||||||||| || | |||||||| || || || ||||| || | Sbjct 2316778 CCACCACGTAGACGCAACACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCTGCT 2316837 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || | ||| || ||||| || || || |||| | | ||||||||| ||||| Sbjct 2316838 AGAGTCCTTCCATCCTCAAGCTGCTTCCCGGCAAAGATAAGCCTCTGCTGATCCGGAGGG 2316897 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||| ||||| ||| ||| || ||| | |||| |||| |||||| | || || || Sbjct 2316898 ATGCCTTCCTTATCCTGGATCTTGGCCTTAACGTTG-TCGATGGTGTCGGAGCTTTCCAC 2316956 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| ||| | || || || || |||||||| || || |||||||| Sbjct 2316957 CTCGAGGGTGATGGTCTTTCCTGTGAGAGTTTTCACGAATATCTGCAT 2317004 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| |||| ||||||||||| || | |||||||| || || || ||||| || | Sbjct 2324573 CCACCACGTAGACGCAACACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCTGCT 2324632 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || | ||| || ||||| || || || |||| | | ||||||||| ||||| Sbjct 2324633 AGAGTCCTTCCATCCTCAAGCTGCTTCCCGGCAAAGATAAGCCTCTGCTGATCCGGAGGG 2324692 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||| ||||| ||| ||| || ||| | |||| |||| |||||| | || || || Sbjct 2324693 ATGCCTTCCTTATCCTGGATCTTGGCCTTAACGTTG-TCGATGGTGTCGGAGCTTTCCAC 2324751 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| ||| | || || || || |||||||| || || |||||||| Sbjct 2324752 CTCGAGGGTGATGGTCTTTCCTGTGAGAGTTTTCACGAATATCTGCAT 2324799 Score = 107 bits (118), Expect = 2e-18 Identities = 151/213 (71%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 |||||| || | || ||||| || || || ||||| || ||| |||||| ||| || Sbjct 2324132 CACCAAGTGAAGTGTTGACTCCTTCTGGATGTTGTAGTCAGCCAAGGTGCGACCATCCTC 2324191 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 ||||| ||||||||| |||| | |||||||| || ||||| ||||| ||||||||| Sbjct 2324192 AAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTG 2324251 Query 127024 GATTTTCTGCTTGA---GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGT 127080 ||| | ||||| | | ||||| | ||||| || || | || | || Sbjct 2324252 GATCTNNNNNNNNNNACGTTGT-CAATAGTGTCGGAGCTCTCCACCTCCAAAGTGATAGT 2324310 Query 127081 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || ||||||| ||| || |||||||||||||| Sbjct 2324311 CTTTCCGGTCAAAGTCTTGACAAAAATCTGCAT 2324343 >seq7 Length=27187321 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| || | || | ||||| || | || ||||| ||||| |||||||| || | Sbjct 639431 TCCACCACGAAGACGAAGAACCAAGTGAAGAGTCGACTCCTTTTGGATATTGTAGTCAGC 639490 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | ||||||| ||| || ||||| || || ||| |||| | || ||||||||| || || Sbjct 639491 AAGCGTGCGACCATCCTCAAGCTGCTTACCGGCGAAGATGAGTCTCTGCTGATCTGGTGG 639550 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || ||||||||| || || ||||| | |||| ||||| | ||||| || Sbjct 639551 GATCCCTTCCTTGTCCTGAATCTTAGCCTTGACATTATCGATTGTGTCTGAGCTCTCAAC 639610 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | ||||||||||| || || || |||||||||||||| Sbjct 639611 CTCCAAAGTGATGGTTTTGCCGGTGAGGGTCTTAACAAAAATCTGCAT 639658 Score = 125 bits (138), Expect = 7e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| ||| ||| || || ||| || |||||||| || Sbjct 640374 GTCGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTACGTCCATCCTCGAGCTGTTTACCG 640433 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | | |||||| || ||||| || || ||||||||| ||| || |||| Sbjct 640434 GCGAAGATGAGCCTCTGCTGGTCCGGAGGAATACCTTCCTTGTCCTGGATCTTAGCCTTG 640493 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| |||||| | ||||||||||||| || | || |||||||| |||||| Sbjct 640494 ACGTTATCGATGGTGTCGGAGCTCTCGACTTCGAGAGTGATGGTCTTGCCGGTGAGAGTT 640553 Query 127097 TTTACAAAAATCTGCAT 127113 || || ||||| ||||| Sbjct 640554 TTCACGAAAATTTGCAT 640570 Score = 118 bits (130), Expect = 1e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || |||||||| | || | || | ||| | ||| ||||| || || || ||||| ||| Sbjct 18014048 GCGCCACCGCGGAGACGGAGGACGAGATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCG 18014107 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 | | ||||| || || |||||||| || ||| |||||| ||||||||| || || Sbjct 18014108 GCGAGGGTGCGGCCGTCTTCCAGCTGTTTCCCGGCGAAGATCAGTCGCTGCTGGTCCGGT 18014167 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063 || || |||||||||||| ||| || ||||| | |||| |||||| | ||| Sbjct 18014168 GGGATTCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGATGATTCG 18014227 Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || |||| ||| | || || || || || ||||| || || |||||||| Sbjct 18014228 ACCTCGAGGGTGATTGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 18014277 Score = 113 bits (124), Expect = 4e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||| | ||| | |||||||||||| ||||| |||||||| | Sbjct 639660 CCACCACGGAGACGAAGCACAAGATGCAGCGTAGACTCTTTCTGAATGTTGTAATCCGCA 639719 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || || |||||||| || || ||| |||| | || || || || || || Sbjct 639720 AGAGTACGTCCGTCTTCTAGCTGCTTCCCGGCGAAGATAAGTCTTTGTTGGTCTGGTGGG 639779 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTG-CTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || ||||| |||||| ||| | | || ||||| | |||| ||||| | ||||| || Sbjct 639780 ATACCCTCTTTGTCC-TGAATCTTTGCCTTGACGTTATCGATCGTGTCAGAGCTCTCCAC 639838 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || | || | |||||||| || || || || ||||||||||||||| Sbjct 639839 CTCCAAAGTGATGGTTTTGCCAGTGAGGGTCTTCACAAAAATCTGCATG 639887 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| | | ||| | ||| | ||| | |||||||||||| ||||| ||||| || | Sbjct 639888 CCACCTCTGAGTCGAAGCACAAGATGCAGCGTAGACTCTTTCTGAATGTTGTAGTCAGCT 639947 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || ||||| || || || |||| | | |||||| || || || Sbjct 639948 AGCGTGCGTCCATCCTCCAGCTGCTTACCGGCAAAGATGAGCCTCTGCTGGTCCGGTGGG 640007 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || ||||| || ||| ||| || ||||| | || | |||||| | ||||| || Sbjct 640008 ATACCCTCTTTATCCTGGATCTTAGCCTTGACGTTATCAATGGTGTCTGAGCTCTCAACC 640067 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | ||||| ||||| || || || ||||| || ||||| Sbjct 640068 TCCAAAGTAATGGTTTTACCGGTGAGGGTCTTGACAAAGATTTGCAT 640114 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/199 (72%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || |||||||| || || |||||||| | | || | ||| || ||||| || || Sbjct 456678 GTGGACTCTTTGTGGATGTTGTAATCAGCAAGAGTCCTGCCATCTTCGAGCTGCTTACCG 456619 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| ||||||| | ||||||||||||||| || || ||||| ||| ||| || |||| Sbjct 456618 GCGAAGATCAACCTCTGCTGATCGGGAGGGATACCTTCCTTATCCTGGATCTT-GGCTTT 456560 Query 127037 A--GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAG 127094 | |||| |||| ||||| | || || |||| ||| | ||| || | ||| |||| Sbjct 456559 AACGTTG-TCGATCGTGTCGGAGCTTAACACCTCGAGGGTGATCGTCTTTCAGGTAAGAG 456501 Query 127095 TTTTTACAAAAATCTGCAT 127113 | || || || |||||||| Sbjct 456500 TCTTAACGAATATCTGCAT 456482 >seq5 Length=45943323 Score = 125 bits (138), Expect = 7e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || |||||||| || || ||||| || ||| |||||| ||| || ||||||||||| Sbjct 16837838 GTCGACTCTTTCTGGATGTTGTAGTCAGCCAAGGTGCGACCATCCTCAAGCTGTTTTCCG 16837897 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 | | ||||||| | ||||||||| | || || || || |||||| ||| || |||| Sbjct 16837898 GTGAAGATCAACCTCTGCTGATCCGATGGGATTCCTTCTTTGTCCTGGATCTTGGCCTTG 16837957 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| |||||| | ||||| || |||| ||| | || ||||| ||||| ||| Sbjct 16837958 ACATTGTCGATGGTGTCACTGCTCTCCACCTCGAGGGTGATGGTCTTGCCCGTCAGTGTT 16838017 Query 127097 TTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 16838018 TTCACGAATATCTGCAT 16838034 >seq1946 Length=8506 Score = 104 bits (114), Expect = 2e-17 Identities = 137/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 126924 CTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGA 126983 |||| || || ||||| || ||| ||||| ||| || |||||||| || ||| ||| Sbjct 2158 CTTTCTGGATGTTGTAGTCAGCCAAAGTGCGGCCATCTTCGAGCTGTTTACCGGCGAAGA 2099 Query 126984 TCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTT 127043 ||| ||||||||||| ||||| || || || ||||| ||| || |||| | | Sbjct 2098 TCAGACGCTGCTGATCCGGAGGGATACCTTCTTTGTCTTGGATCTTGGCTTTGACATTGT 2039 Query 127044 CGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 127103 ||| |||||| | |||||| |||| || | || |||||||| || ||||| || | Sbjct 2038 CGATGGTGTCGGAGGACTCGACCTCGAGAGTGATGGTCTTGCCGGTTAGGGTTTTCACGA 1979 Query 127104 AAATCTGCAT 127113 | |||||||| Sbjct 1978 AGATCTGCAT 1969 >seq4 Length=50002108 Score = 95.1 bits (104), Expect = 1e-14 Identities = 135/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 126924 CTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGA 126983 |||| || || ||||| || ||| || || ||| || |||||||| || ||| ||| Sbjct 24965451 CTTTCTGGATGTTGTAGTCAGCCAAAGTACGGCCATCTTCGAGCTGTTTACCGGCGAAGA 24965392 Query 126984 TCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTT 127043 ||| ||||||||||| ||||| || || || ||||| ||| || |||| | | Sbjct 24965391 TCAGACGCTGCTGATCCGGAGGGATACCTTCTTTGTCTTGGATCTTGGCTTTGACATTGT 24965332 Query 127044 CGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 127103 ||| |||||| | |||||| |||| || | || ||||| || || ||||| || | Sbjct 24965331 CGATGGTGTCGGAGGACTCGACCTCGAGAGTGATGGTCTTGCCCGTTAGGGTTTTCACGA 24965272 Query 127104 AAATCTGCAT 127113 | |||||||| Sbjct 24965271 AGATCTGCAT 24965262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475437344418240