Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raphanus_20sativus_20[refseq_20GCF_5F000801105.1_202015-09-29] 10,676 sequences; 426,614,037 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq7 114 8e-21 seq4 105 4e-18 seq5 102 5e-17 seq3 100 2e-16 seq9 96.9 2e-15 seq6 93.3 3e-14 seq3342 89.7 3e-13 seq1 82.4 5e-11 >seq7 Length=27187321 Score = 114 bits (126), Expect = 8e-21 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 |||||||||||||| || |||| ||| | ||| | || || ||||| || ||||| || Sbjct 639696 TCTTTCTGAATGTTGTAATCCGCAAGAGTACGTCCGTCTTCTAGCTGCTTCCCGGCGAAG 639755 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || |||| ||| |||||| | || | ||||| ||||| |||||| |||||| Sbjct 639756 ATAAGTCTTTGTTGGTCTGGTGGGATACCCTCTTTGTCCTGAATCTTTGCCTTGACGTTA 639815 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| ||| | ||| || || | || |||||||| || ||||| ||||||||| Sbjct 639816 TCGATCGTGTCAGAGCTCTCCACCTCCAAAGTGATGGTTTTGCCAGTGAGGGTCTTCACA 639875 Query 34971 AAGATCTGCAT 34981 || |||||||| Sbjct 639876 AAAATCTGCAT 639886 Score = 98.7 bits (108), Expect = 6e-16 Identities = 152/215 (71%), Gaps = 8/215 (4%) Strand=Plus/Plus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||||||||| || || || || || || ||||| | ||| | || |||| || Sbjct 639449 AACCAAGTGAAGAGTCGACTCCTTTTGGATATTGTAGTCAGCAAGCGTGCGACCATCCTC 639508 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||||| || ||||| || || |||| ||||| ||| | || | ||| |||||||| Sbjct 639509 AAGCTGCTTACCGGCGAAGATGAGTCTCTGCTGATCTGGTGGGATCCCTTCCTTGTCCTG 639568 Query 34892 AATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGG 34947 |||||| ||||| || ||||||| || | |||||| || | || |||| Sbjct 639569 AATCTTAGCCTTGAC--AT--TATCGATTGTGTCTGAGCTCTCAACCTCCAAAGTGATGG 639624 Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 |||| || ||||| ||||| ||||| ||||||||| Sbjct 639625 TTTTGCCGGTGAGGGTCTTAACAAAAATCTGCATA 639659 Score = 98.7 bits (108), Expect = 6e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 |||||||||||||| ||||| | || | ||| |||| |||||||| || |||||||| Sbjct 639924 TCTTTCTGAATGTTGTAGTCAGCTAGCGTGCGTCCATCCTCCAGCTGCTTACCGGCAAAG 639983 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || | |||||||| | || | ||||| || || ||||| |||||| Sbjct 639984 ATGAGCCTCTGCTGGTCCGGTGGGATACCCTCTTTATCCTGGATCTTAGCCTTGACGTTA 640043 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || | |||||| || | || |||||||| || ||||| ||||| ||| Sbjct 640044 TCAATGGTGTCTGAGCTCTCAACCTCCAAAGTAATGGTTTTACCGGTGAGGGTCTTGACA 640103 Query 34971 AAGATCTGCATA 34982 ||||| |||||| Sbjct 640104 AAGATTTGCATA 640115 Score = 86.0 bits (94), Expect = 4e-12 Identities = 139/198 (70%), Gaps = 8/198 (4%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | || | || | || ||||||||||| ||||| || Sbjct 17979961 TCCTTCTGGATGTTGTAGTCGGCGAGTGTGCGGCCGTCTTCCAGCTGTTTCCCGGCGAAG 17980020 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || ||||| |||||||| | || | || |||||||| ||||| |||||| || Sbjct 17980021 ATCAGTCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCCTGGATCTTGGCTTTGAC--AT 17980078 Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | ||||| || | || || |||| ||| || || || ||||| || || || Sbjct 17980079 --TGTCGATGGTGTCGGATGATTCGACCTCGAGGGTGATCGTCTTCCCCGTTAGGGTTTT 17980136 Query 34967 CACAAAGATCTGCATATT 34984 ||| ||||||||||| || Sbjct 17980137 CACGAAGATCTGCATCTT 17980154 Score = 84.2 bits (92), Expect = 1e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | || | || |||| |||||||| || || ||||| Sbjct 640152 TCCTTCTGGATGTTGTAGTCAGCGAGCGTGCGACCATCCTCCAGCTGCTTACCAGCAAAA 640211 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || | ||||| || | || | || |||||||| |||||| ||||| Sbjct 640212 ATAAGCCTCTGCTGATCCGGAGGGATGCCTTCCTTGTCCTGTATCTTCGCCTTGACATTG 640271 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || | |||||| |||| || ||||| |||||||| | |||||| || Sbjct 640272 TCAATAGTGTCGGAGCTCTCAACCTCGAGAGTGATGGTCTTTCCCGTCAAAGTCTTGACG 640331 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 640332 AAGATCTGCAT 640342 >seq4 Length=50002108 Score = 105 bits (116), Expect = 4e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34754 TCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGA 34813 |||||| |||| | | ||||| ||||| || || ||||| ||||| ||||| | Sbjct 49702187 TCCTCCTCTCAGACGGAGAACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 49702128 Query 34814 AAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGG 34873 ||| | ||| | || || ||||| |||||||| || || || || |||||||| | || Sbjct 49702127 GAGGGTGCGTCCGTCCTCGAGCTGCTTTCCGGCGAAAATGAGGCGCTGCTGGTCCGGAGG 49702068 Query 34874 CACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAAC 34933 | || |||||||| ||||| |||||| | || | || || ||| || Sbjct 49702067 GATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGACTCGAC 49702008 Query 34934 ATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 |||| |||||| || || ||||| || || ||||| ||||||||||| Sbjct 49702007 CTCGAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 49701960 >seq5 Length=45943323 Score = 102 bits (112), Expect = 5e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | || | || | || |||||||| || ||||| ||| Sbjct 32128032 TCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGGCCGTCTTCCAGCTGCTTCCCGGCGAAT 32127973 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || ||||| |||||||| | || | ||| |||||||| ||||| |||||| Sbjct 32127972 ATCAGTCGCTGCTGGTCCGGAGGGATCCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTG 32127913 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || || ||| || |||| |||||| || || ||||| || || ||||| Sbjct 32127912 TCGATGGTGTCGGAGGACTCGACCTCGAGGGTTATCGTCTTACCCGTTAGGGTTTTCACG 32127853 Query 34971 AAGATCTGCATATT 34984 ||||||||||| || Sbjct 32127852 AAGATCTGCATCTT 32127839 Score = 84.2 bits (92), Expect = 1e-11 Identities = 161/235 (69%), Gaps = 8/235 (3%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 |||||||| ||||||| ||| | || | || |||||||| ||||| ||||| | Sbjct 16837808 CCTCCCCTTAACCTCAGAACAAGATGCAGAGTCGACTCTTTCTGGATGTTGTAGTCAGCC 16837867 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 | | | || |||| || ||||||||||||| || || | | ||||| || || Sbjct 16837868 AAGGTGCGACCATCCTCAAGCTGTTTTCCGGTGAAGATCAACCTCTGCTGATCCGATGGG 16837927 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTC 34930 | || || ||||| ||||| ||||| || | ||||| |||| | ||| Sbjct 16837928 ATTCCTTCTTTGTCCTGGATCTTGGCCTTGAC--AT--TGTCGATGGTGTCACTGCTCTC 16837983 Query 34931 AACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATTC 34985 || |||| ||| ||||| || ||||| || || ||||| || |||||||| ||| Sbjct 16837984 CACCTCGAGGGTGATGGTCTTGCCCGTCAGTGTTTTCACGAATATCTGCATCTTC 16838038 >seq3 Length=29132933 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||| | || | ||| |||||||||| || |||||||| |||||||| || | Sbjct 9517120 CCTCCACGCAGACGCAACACCAAGTGAAGCGTAGACTCTTTCTGGATGTTATAATCAGCC 9517061 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 | ||| | || || ||||| ||||| || ||||| | || |||||||| | || Sbjct 9517060 AATGTTCTACCGTCCTCAAGCTGCTTTCCAGCGAATATCAATCTCTGCTGGTCCGGAGGG 9517001 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | ||||||||||| ||||| |||||| | || | || | ||||||| Sbjct 9517000 ATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCCCTCAACC 9516941 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || | || ||||| ||||| || | |||||| ||||||||||||||| Sbjct 9516940 TCCAAAGTAATGGTCTTTCCGGTCAAAGTCTTGACAAAGATCTGCATA 9516893 Score = 98.7 bits (108), Expect = 6e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | | | |||| |||| || ||||| |||||||| || Sbjct 16258890 TCCTTCTGGATGTTGTAGTCGGCCAAGGTTCGACCATCCTCGAGCTGCTTTCCGGCGAAG 16258949 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||| || | || | ||| |||||||| ||||| ||| ||| Sbjct 16258950 ATGAGACGCTGCTGATCCGGAGGGATCCCTTCCTTGTCCTGGATCTTGGCTTTCACGTTG 16259009 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || | || || |||| ||| || || |||||||||||||| ||||| Sbjct 16259010 TCGATGGTGTCGGAGCTTTCCACCTCGAGGGTGATTGTCTTTCCCGTGAGAGTTTTCACG 16259069 Query 34971 AAGATCTGCATATTCGT 34987 ||||||||||| || || Sbjct 16259070 AAGATCTGCATCTTGGT 16259086 Score = 95.1 bits (104), Expect = 8e-15 Identities = 141/198 (71%), Gaps = 8/198 (4%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | ||| | || | || |||||||| |||||||| || Sbjct 11118425 TCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCCTCCAGCTGCTTTCCGGCGAAG 11118484 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || ||||| |||||||| | || | || |||||||| ||||| ||||| || Sbjct 11118485 ATCAGTCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTGAC--AT 11118542 Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | ||||| || || ||| || |||| ||| || || || ||||| || || || Sbjct 11118543 --TGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATTGTCTTCCCCGTTAGGGTTTT 11118600 Query 34967 CACAAAGATCTGCATATT 34984 ||| ||||||||||| || Sbjct 11118601 CACGAAGATCTGCATCTT 11118618 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||||| || |||||||| ||||| ||||| | | | | || |||| Sbjct 9517334 CAACACCAAGTGAAGGGTCGACTCTTTCTGGATGTTGTAGTCGGCTAAGGTACGACCATC 9517275 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 || ||||| ||||| || || || || ||||||||||| | || | || ||||| || Sbjct 9517274 CTCGAGCTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCCGGAGGAATGCCTTCCTTATC 9517215 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 ||||| ||||| | || | ||| | ||| || || | || ||||| Sbjct 9517214 CTGGATCTTGGCCTTGACATTGTCAATGGTGTCAGAGCTCTCCACCTCCAGTGTGATGGT 9517155 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || || || |||||||||||||||||||| Sbjct 9517154 CTTGCCGGTAAGTGTCTTCACAAAGATCTGCAT 9517122 Score = 86.0 bits (94), Expect = 4e-12 Identities = 137/196 (70%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || |||||||| |||||||| | ||| | | |||| || ||||| || |||||||| Sbjct 16258662 TCCTTCTGAATATTATAGTCAGCAAGAGTCCTCCCATCCTCAAGCTGCTTCCCGGCAAAG 16258721 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || | |||||||| | || | ||||||||| || ||||| |||||| Sbjct 16258722 ATCAGCCTCTGCTGGTCCGGTGGGATCCCCTCCTTATCTTGTATCTTAGCCTTGACGT-- 16258779 Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 ||||||| || | ||| || || | || || || ||||| || |||||||| Sbjct 16258780 --TATCGATGGTGTCGGAGCTCTCCACCTCCAAAGTGATAGTCTTTCCGGTAAGAGTCTT 16258837 Query 34967 CACAAAGATCTGCATA 34982 || |||||||||||| Sbjct 16258838 GACGAAGATCTGCATA 16258853 >seq9 Length=38354807 Score = 96.9 bits (106), Expect = 2e-15 Identities = 162/232 (70%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||| | || | ||| |||||||||| ||| || || || || || ||||| | Sbjct 21327147 CCTCCACGCAGACGCAACACCAAGTGAAGTGTAGACTCCTTTTGGATATTGTAGTCAGCG 21327206 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || | | | || || ||||| ||||||||||| || | | ||||||||| | || Sbjct 21327207 AGAGTCCTGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCTGGAGGG 21327266 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTC 34930 | ||||||||||| ||||| |||||| || |||| || || | ||| Sbjct 21327267 ATACCCTCCTTGTCTTGGATCTTAGCTTTGAC--AT--TATCAATGGTGTCGGAGCTCTC 21327322 Query 34931 AACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 ||| |||| ||| || || ||||| || || ||||| ||||||||||||||| Sbjct 21327323 AACTTCGAGGGTGATTGTCTTTCCGGTTAGTGTCTTGACAAAGATCTGCATA 21327374 Score = 89.7 bits (98), Expect = 3e-13 Identities = 150/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 34766 CCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTC 34825 ||| | ||||||||| | ||| || ||||| ||||| ||||| | || ||| | Sbjct 21327842 CCTGAGAACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGAGTTCTGCC 21327901 Query 34826 ATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTT 34885 || || ||||| || |||||||| || | | |||||||| | || | ||||||||| Sbjct 21327902 GTCTTCAAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGGATCCCCTCCTT 21327961 Query 34886 GTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTAT 34945 ||| ||||| ||| ||| | || | || | ||| || || | ||| || Sbjct 21327962 GTCCTGGATCTTTGCTTTCACGTTGTCAATGGTGTCGGAGCTCTCCACCTCTAGGGTAAT 21328021 Query 34946 GGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 ||||||||||| | ||||| || |||||||||||| Sbjct 21328022 AGTTTTTCCCGTCAAGGTCTTAACGAAGATCTGCATA 21328058 Score = 87.8 bits (96), Expect = 1e-12 Identities = 152/217 (70%), Gaps = 8/217 (4%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||||||||| || || ||||| ||||| ||||| | ||| | || |||| Sbjct 21326933 CAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTGCGACCATC 21326992 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 || ||||| ||||| || || || || || ||||| ||| | || | ||| |||||||| Sbjct 21326993 CTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCTGGAGGGATCCCTTCCTTGTC 21327052 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGAT--TCACCG-GC-CTCAACATCGACGGTTA 34944 ||||| ||| ||| |||| || | ||| || ||| || || | || | Sbjct 21327053 TTGGATCTTGGCTTTCACGT----TATCAATGGTGTCCGAGCTCTCCACCTCCAGTGTGA 21327108 Query 34945 TGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 |||| || || || | ||||| |||||||||||||| Sbjct 21327109 TGGTCTTACCAGTCAAGGTCTTGACAAAGATCTGCAT 21327145 Score = 82.4 bits (90), Expect = 5e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34770 AAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCA 34829 || |||||||||| || |||||||||||||| || || | | | | || |||| Sbjct 21315362 AACACCAAGTGAAGGGTTGACTCTTTCTGAATGTTGTAATCAGCCAAGGTGCGACCATCC 21315421 Query 34830 TCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34889 || ||||| || || || || || || || |||||||| | || | |||||||||||| Sbjct 21315422 TCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGGATCCCCTCCTTGTCC 21315481 Query 34890 CTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTT 34949 |||||| |||||| | || | || | ||| || || | || || || Sbjct 21315482 TGAATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCCACCTCCAAAGTGATAGTC 21315541 Query 34950 TTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || || ||||| | ||| ||||||||| Sbjct 21315542 TTCCCGGTCAGTGTCTTAATAAAAATCTGCATA 21315574 Score = 82.4 bits (90), Expect = 5e-11 Identities = 149/216 (69%), Gaps = 4/216 (2%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG--AAAGGCTTCGTTCA 34826 ||| |||||||| | || || ||||| ||||| ||||| | |||| | || || Sbjct 21327617 CAAGACCAAGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCAGCCAAAG--TGCGACCA 21327674 Query 34827 TCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34886 || |||| ||| || |||||||| || | || |||||||| | || | ||||||||| Sbjct 21327675 TCTTCCAACTGCTTGCCGGCAAAGATCAATCTCTGCTGGTCCGGTGGGATCCCCTCCTTA 21327734 Query 34887 TCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATG 34946 || ||||| ||| ||| | || | || | ||| || || | || ||| Sbjct 21327735 TCTTGGATCTTAGCTTTAACGTTGTCAATGGTGTCGGAGCTCTCCACCTCCAAAGTGATG 21327794 Query 34947 GTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || ||||| || | ||||| ||||||||||||||| Sbjct 21327795 GTCTTTCCGGTCAACGTCTTGACAAAGATCTGCATA 21327830 >seq6 Length=53636577 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 34754 TCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGA 34813 |||||| |||| | | |||||||||| || || ||||| ||||| ||||||| Sbjct 30640176 TCCTCCTCTCAGGCGGAGCACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCCGC 30640117 Query 34814 AAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGG 34873 || | | | || || ||||| || ||||| || || || || |||||||| | || Sbjct 30640116 GAGCGTCCTCCCGTCTTCGAGCTGCTTCCCGGCGAAGATCAGACGCTGCTGGTCCGGTGG 30640057 Query 34874 CACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAAC 34933 | ||| |||||||| |||||| ||||| | |||| || | || || Sbjct 30640056 GATCCCTTCCTTGTCCTGAATCTTGGCCTTGACATTGTCGATCGTGTCGGATGATTCGAC 30639997 Query 34934 ATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 || | |||||| || || ||||| || || ||||||||||||||||| || Sbjct 30639996 CTCTAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCATTTT 30639946 >seq3342 Length=4839 Score = 89.7 bits (98), Expect = 3e-13 Identities = 140/198 (71%), Gaps = 8/198 (4%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| | ||| | || | || |||||||| || ||||| || Sbjct 2602 TCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCCTCCAGCTGCTTCCCGGCGAAG 2661 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || ||||| |||||||| | || | || |||||||| ||||| ||||| || Sbjct 2662 ATCAGTCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTGAC--AT 2719 Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | ||||| || || ||| || |||| ||| || || || ||||| || || || Sbjct 2720 --TGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATTGTCTTCCCCGTTAGGGTTTT 2777 Query 34967 CACAAAGATCTGCATATT 34984 ||| ||||||||||| || Sbjct 2778 CACGAAGATCTGCATCTT 2795 >seq1 Length=26309735 Score = 82.4 bits (90), Expect = 5e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 34754 TCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGA 34813 ||||||||||| | | ||||| ||||| || || ||||| ||||| || |||| Sbjct 10591979 TCCTCCCCTCAGACGGAGAACCAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGC 10591920 Query 34814 AAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGG 34873 || | | | | || |||||||| || ||||| || || ||||| |||||||| |||| Sbjct 10591919 GAGCGTCCTTCCGTCCTCCAGCTGCTTCCCGGCGAAGATCAGTCGCTGCTGGTCCGGCGG 10591860 Query 34874 CACCCCCTCCTTGTC 34888 | ||| |||||||| Sbjct 10591859 GATCCCTTCCTTGTC 10591845 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324591360704928