Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raphanus_20sativus_20[refseq_20GCF_5F000801105.1_202015-09-29] 10,676 sequences; 426,614,037 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq2 136 3e-26 seq7 132 4e-25 seq5 129 5e-24 seq6 125 6e-23 seq5718 116 3e-20 seq9 105 5e-17 seq92 104 2e-16 seq8 100 2e-15 seq4 91.5 1e-12 >seq2 Length=43799612 Score = 136 bits (150), Expect = 3e-26 Identities = 117/145 (81%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 550389 AAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTA 550448 |||| || | || || || ||||| || || ||||||||||||||||| | ||||| Sbjct 36642193 AAGTCACCAAGGCTGTTATCACTGTGCCTGCTTATTTTAATGACTCACAGAGGACAGCTA 36642252 Query 550449 CTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTG 550508 ||||||||||||| || |||||||| || |||||||||||||||||||||| || |||| Sbjct 36642253 CTAAAGATGCTGGTCGCATTGCTGGGCTGGATGTTCTTCGTATTATCAATGAGCCCACTG 36642312 Query 550509 CTGCTGCACTTGCATATGGACTTGA 550533 ||||| | || || ||||| |||| Sbjct 36642313 CTGCTTCTCTGGCTTATGGTTTTGA 36642337 Score = 114 bits (126), Expect = 1e-19 Identities = 96/118 (81%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 ||||| || | || |||||||||||||| | |||||||||||| ||||| || || Sbjct 36645548 ACTGTGCCTTCTTACTTTAATGACTCACAGAGGACAGCTACTAAAGAAGCTGGTCGCATC 36645607 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATG 550526 ||||| ||| |||||||||||||||||||||| || ||||||||| || | || |||| Sbjct 36645608 GCTGGGCTTGATGTTCTTCGTATTATCAATGAGCCCACTGCTGCTTCATTGGCTTATG 36645665 >seq7 Length=27187321 Score = 132 bits (146), Expect = 4e-25 Identities = 559/871 (64%), Gaps = 14/871 (2%) Strand=Plus/Minus Query 551727 GGAACTCATGACGTAACTCTTCTATCTCTCGAAGATGGTCTCTTTTCTGTATTAGCTACT 551786 || ||| ||| || | ||||| || | || || ||| ||||| || || ||| Sbjct 83678 GGTACTTTTGATGTCTCCCTTCTCACTATTGAGGAAGGTATCTTTGAGGTTAAGGCCACT 83619 Query 551787 AGTGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTG 551844 ||||| ||||||| ||||| ||||||||||| || || |||| | || | || Sbjct 83618 GCCGGAGACACTCATCTCGGTGGGGAAGATTTTGACAACAGGATGGTCAACCAC--TTTG 83561 Query 551845 TTGAAGATTTTAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAAAGCTCTTCGTC 551904 || | || ||||| | || | ||| || | || | | | ||||||| | Sbjct 83560 TTCAGGAGTTTAAGAGGAAGAGCAAGAAGGACATTACTGGAAACCCGAGAGCTCTTAGGA 83501 Query 551905 GTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTA 551964 | | || ||||| || || || || || | ||||||| || | |||| ||||| | Sbjct 83500 GGTTGAGGACTGCCTGTGAGAGGGCAAAGAGGACTCTTTCCTCCACTGCTCAGACCACCA 83441 Query 551965 TTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAAT 552024 | || | || || | |||||||||||||||| | | | || | | |||| || Sbjct 83440 TCGAGATTGACTCTCTCTTTGAGGGAATTGATTTCTACTCTGCACTTACCCGTGCCAGAT 83381 Query 552025 TTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTT-TA 552083 | || || | ||||||||||| || || || ||||| || |||| | || Sbjct 83380 TCGAGGAGCTCAACATGGATCTCTTTAGGAAGTGTATGGAGCCAGTTGAG-AAGTGTCTA 83322 Query 552084 AGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACA 552143 | ||| | ||||| || || || || || || |||| ||||| ||||| || || Sbjct 83321 CGTGATGCTAAGATGGACAAGAGCACCGTCCACGATGTTGTCCTTGTCGGTGGCTCCACC 83262 Query 552144 AGAATTCCTAAAATTCGCGAAATG-TTAAGTTCTTATTTCAATGGTAAAAAATTAAATGA 552202 | ||||| || ||| || || || || ||| |||||| || ||| | | || Sbjct 83261 CGTATTCCCAAGGTTCAGCAATTGCTTCAGGACTT-TTTCAACGGCAAAGAGCTT--TGC 83205 Query 552203 AAGTGTT--AATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTT 552260 |||| | || || || ||||||||||| || ||||| ||| | || | ||||||||| Sbjct 83204 AAGTCTATCAACCCCGACGAGGCTGTTGCTTACGGTGCTGCAGTCCAGGGAGCTATTCTC 83145 Query 552261 TCTGGACAAACTGATGAAAAACTACAAAATATTGTACTTG-TAGATGTTACTCCTCTATC 552319 || || | || || | ||| || || | |||| | ||||| |||||||| || Sbjct 83144 AGCGGTGAAGGAAACGAGAAGGTCCAAGATCTTCT-CTTGCTTGATGTCACTCCTCTCTC 83086 Query 552320 TCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTAT 552379 || ||| | ||||| | || ||| | ||||| | | | |||| || || || || || Sbjct 83085 ACTCGGTCTTGAAACCGCCGGTGGTGTCATGACCACTTTGATCGCAAGGAACACCACCAT 83026 Query 552380 TCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAAT 552439 |||| ||||| | || || || || |||||||| || || | | ||| || Sbjct 83025 TCCTACCAAAAAGGAGCAAGTGTTCTCAACCTATTCAGACAACCAGCCAGGTGTGTTGAT 82966 Query 552440 TCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAA 552499 || | || || || || ||| || || || || || | ||| || | ||| | Sbjct 82965 CCAGGTGTTCGAGGGTGAGAGAGCCAGAACCAAGGACAACAACCTACTCGGGAAGTTTGA 82906 Query 552500 TTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATAT 552559 | || || ||||| || || ||||| || || || || || ||| || || Sbjct 82905 GCTCTCTGGAATCCCTCCAGCCCCACGTGGTGTCCCTCAGATCACTGTCTGTTTTGACAT 82846 Query 552560 CGATGCCAATGGAATTTTGAATGTGACTGCT 552590 || |||||||| ||| | || || ||||| Sbjct 82845 TGACGCCAATGGTATTCTCAACGTCTCTGCT 82815 Score = 132 bits (146), Expect = 4e-25 Identities = 559/871 (64%), Gaps = 14/871 (2%) Strand=Plus/Minus Query 551727 GGAACTCATGACGTAACTCTTCTATCTCTCGAAGATGGTCTCTTTTCTGTATTAGCTACT 551786 || ||| ||| || | ||||| || | || || ||| ||||| || || ||| Sbjct 108776 GGTACTTTTGATGTCTCCCTTCTCACTATTGAGGAAGGTATCTTTGAGGTTAAGGCCACT 108717 Query 551787 AGTGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTG 551844 ||||| ||||||| ||||| ||||||||||| || || |||| | || | || Sbjct 108716 GCCGGAGACACTCATCTCGGTGGGGAAGATTTTGACAACAGGATGGTCAACCAC--TTTG 108659 Query 551845 TTGAAGATTTTAAACGAAAAAACAAAGTTGATCTATCTACATCTGCCAAAGCTCTTCGTC 551904 || | || ||||| | || | ||| || | || | | | ||||||| | Sbjct 108658 TTCAGGAGTTTAAGAGGAAGAGCAAGAAGGACATTACTGGAAACCCGAGAGCTCTTAGGA 108599 Query 551905 GTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTA 551964 | | || ||||| || || || || || | ||||||| || | |||| ||||| | Sbjct 108598 GGTTGAGGACTGCCTGTGAGAGGGCAAAGAGGACTCTTTCCTCCACTGCTCAGACCACCA 108539 Query 551965 TTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAAT 552024 | || | || || | |||||||||||||||| | | | || | | |||| || Sbjct 108538 TCGAGATTGACTCTCTCTTTGAGGGAATTGATTTCTACTCTGCACTTACCCGTGCCAGAT 108479 Query 552025 TTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTT-TA 552083 | || || | ||||||||||| || || || ||||| || |||| | || Sbjct 108478 TCGAGGAGCTCAACATGGATCTCTTTAGGAAGTGTATGGAGCCAGTTGAG-AAGTGTCTA 108420 Query 552084 AGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACA 552143 | ||| | ||||| || || || || || || |||| ||||| ||||| || || Sbjct 108419 CGTGATGCTAAGATGGACAAGAGCACCGTCCACGATGTTGTCCTTGTCGGTGGCTCCACC 108360 Query 552144 AGAATTCCTAAAATTCGCGAAATG-TTAAGTTCTTATTTCAATGGTAAAAAATTAAATGA 552202 | ||||| || ||| || || || || ||| |||||| || ||| | | || Sbjct 108359 CGTATTCCCAAGGTTCAGCAATTGCTTCAGGACTT-TTTCAACGGCAAAGAGCTT--TGC 108303 Query 552203 AAGTGTT--AATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTT 552260 |||| | || || || ||||||||||| || ||||| ||| | || | ||||||||| Sbjct 108302 AAGTCTATCAACCCCGACGAGGCTGTTGCTTACGGTGCTGCAGTCCAGGGAGCTATTCTC 108243 Query 552261 TCTGGACAAACTGATGAAAAACTACAAAATATTGTACTTG-TAGATGTTACTCCTCTATC 552319 || || | || || | ||| || || | |||| | ||||| |||||||| || Sbjct 108242 AGCGGTGAAGGAAACGAGAAGGTCCAAGATCTTCT-CTTGCTTGATGTCACTCCTCTCTC 108184 Query 552320 TCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTAT 552379 || ||| | ||||| | || ||| | ||||| | | | |||| || || || || || Sbjct 108183 ACTCGGTCTTGAAACCGCCGGTGGTGTCATGACCACTTTGATCGCAAGGAACACCACCAT 108124 Query 552380 TCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAAT 552439 |||| ||||| | || || || || |||||||| || || | | ||| || Sbjct 108123 TCCTACCAAAAAGGAGCAAGTGTTCTCAACCTATTCAGACAACCAGCCAGGTGTGTTGAT 108064 Query 552440 TCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAA 552499 || | || || || || ||| || || || || || | ||| || | ||| | Sbjct 108063 CCAGGTGTTCGAGGGTGAGAGAGCCAGAACCAAGGACAACAACCTACTCGGGAAGTTTGA 108004 Query 552500 TTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATAT 552559 | || || ||||| || || ||||| || || || || || ||| || || Sbjct 108003 GCTCTCTGGAATCCCTCCAGCCCCACGTGGTGTCCCTCAGATCACTGTCTGTTTTGACAT 107944 Query 552560 CGATGCCAATGGAATTTTGAATGTGACTGCT 552590 || |||||||| ||| | || || ||||| Sbjct 107943 TGACGCCAATGGTATTCTCAACGTCTCTGCT 107913 Score = 104 bits (114), Expect = 2e-16 Identities = 125/170 (74%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 549995 ATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTT 550054 ||||| |||||| | || ||||| || |||||||||||||| | |||||| | ||| Sbjct 24349236 ATAGGGATAGATCTTGGTACCACCTACTCTTGTGTTGGTGTTTACAAGAATGGTCATGTT 24349177 Query 550055 GAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAA 550114 ||||| ||||||||||| ||||| ||| | | |||||| || | ||| ||||||| || Sbjct 24349176 GAAATCATTGCCAATGACCAAGGCAACCGTATTACTCCTTCATGGGTTGCTTTCACCGAC 24349117 Query 550115 ACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCC 550164 | ||| | ||||||| || || || | || || ||| |||||| Sbjct 24349116 TCCGAAAGACTCATTGGTGAGGCTGCTAAGAACCAGGCTGCTGTTAATCC 24349067 Score = 96.9 bits (106), Expect = 3e-14 Identities = 155/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315 |||||| || |||||||| || ||| ||||| ||| |||||||| || ||||| | Sbjct 639668 GAGACGAAGCACAAGATGCAGCGTAGACTCTTTCTGAATGTTGTAATCCGCAAGAGTACG 639727 Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375 | ||||| || || || ||||| || ||||||||||| || || || || || || || Sbjct 639728 TCCGTCTTCTAGCTGCTTCCCGGCGAAGATAAGTCTTTGTTGGTCTGGTGGGATACCCTC 639787 Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTG-TGAGTACATTCGAGAG 563434 ||| || ||||| ||| || || || || || |||| | | || || | || Sbjct 639788 TTTGTCCTGAATCTTTGCCTTGACGTTATCGATCGTGTCAGAGCTCTCCAC-CTCCAAAG 639846 Query 563435 TAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | | ||||| ||||| || || || || ||||| ||||| Sbjct 639847 TGATGGTTTTGCCAGTGAGGGTCTTCACAAAAATCTGCAT 639886 Score = 95.1 bits (104), Expect = 1e-13 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 563262 GAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATC 563321 ||| || |||||||| || |||||| || ||||||||||| ||||| || ||| Sbjct 456694 GAGGACGAGATGAAGAGTGGACTCTTTGTGGATGTTGTAATCAGCAAGAGTCCTGCCATC 456635 Query 563322 TTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATC 563381 ||| || || || ||||| || || | || |||||||| ||||| || ||||| ||||| Sbjct 456634 TTCGAGCTGCTTACCGGCGAAGATCAACCTCTGCTGATCGGGAGGGATACCTTCCTTATC 456575 Query 563382 TTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTG-TGAGTACATTCGAGAGTAACAG 563440 || || || ||| || || || || || | | | | || ||||| || | | Sbjct 456574 CTGGATCTTGGCTTTAACGTTGTCGATCGTGTCGGAGCTTAACAC-CTCGAGGGTGATCG 456516 Query 563441 TTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | || | |||||||| |||||||| || ||||| Sbjct 456515 TCTTTCAGGTAAGAGTCTTAACGAATATCTGCAT 456482 >seq5 Length=45943323 Score = 129 bits (142), Expect = 5e-24 Identities = 558/871 (64%), Gaps = 16/871 (2%) Strand=Plus/Plus Query 551727 GGAACTCATGACGTAACTCTTCTATCTCTCGAAGATGGTCTCTTTTCTGTATTAGCTACT 551786 || ||| ||| || ||||||| || | ||||| ||| ||||| || |||||| Sbjct 37608391 GGTACTTTTGATGTTTCTCTTCTTACTATTGAAGAAGGTATCTTTGAGGTCAAGGCTACT 37608450 Query 551787 AGTGGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTG 551844 |||||| ||||||||||||| ||||| ||||| || ||| |||| | || | || Sbjct 37608451 GCTGGAGACACTCATCTTGGTGGTGAAGACTTTGACAACAGAATGGTTAACCAC--TTTG 37608508 Query 551845 TTGAAGATTTTAAACGAAAAAACAAAGTTGATCT-ATCTACATCTGCCAAAGCTCTTCGT 551903 || |||| || || | || | ||| ||| | | | | | ||| |||| | | Sbjct 37608509 TTCAAGAGTTCAAGAGGAAGAGCAAGAAGGATATTAGCGGTAACC-CCAGAGCTTTGAGG 37608567 Query 551904 CGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACT 551963 | | || || || ||||| ||||| || | ||||||| || | |||| ||||| Sbjct 37608568 AGGTTGAGGACGGCCTGCGAGAGAGCGAAGAGGACTCTTTCTTCCACTGCTCAGACCACC 37608627 Query 551964 ATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAA 552023 || || | || || | |||||||| ||||||| || | | | | | || | Sbjct 37608628 ATCGAGATTGACTCTCTCTTTGAGGGGATTGATTTCTATTCTGCACTCACACGTGCTAGG 37608687 Query 552024 TTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTT-T 552082 || || || | ||||| || || || || || || || || |||| | | Sbjct 37608688 TTCGAGGAGCTCAACATGGATCTTTTCAGGAAGTGTATGGAGCCCGTGGAG-AAGTGTCT 37608746 Query 552083 AAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTAC 552142 | ||| | ||||| || || || || || || |||| || || ||||| || || Sbjct 37608747 GCGTGATGCCAAGATGGACAAGAGCACTGTCCACGATGTTGTCCTCGTCGGTGGTTCCAC 37608806 Query 552143 AAGAATTCCTAAAATTCGCGAAATGTT--AAGTTCTTATTTCAATGGTAAAAAATTAAAT 552200 | | || || ||| ||| | | | ||| | | |||||||| ||| | | | Sbjct 37608807 ACGTATCCCCAAAGTTCAACAGCTTCTCCAAGATTTC--TTCAATGGGAAAGAGCTG--T 37608862 Query 552201 GAAAGTG--TTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTC 552258 | |||| |||| || || |||||||| || ||||| || || |||||| ||||||| Sbjct 37608863 GCAAGTCCATTAACCCTGACGAGGCTGTGGCTTATGGAGCAGCTGTTCAAGGTGCTATTC 37608922 Query 552259 TTTCTGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTAT 552318 | || || | |||| || | ||| | || | || | || || |||||||| | Sbjct 37608923 TAAGCGGTGAAGGTAATGAGAAGGTGCAAGACCTTCTTCTGTTGGACGTGACTCCTCTGT 37608982 Query 552319 CTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTA 552378 |||| ||| | ||||| | ||| || | ||||| | | ||| | || || ||||| | Sbjct 37608983 CTCTGGGTCTCGAAACCGCTGGTGGAGTCATGACCACCTTGATCCAGAGGAACACTACGA 37609042 Query 552379 TTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAA 552438 | || || || | || || ||||| || ||||| || || ||| ||| | Sbjct 37609043 TCCCAACCAAGAAGGAACAGGTCTTCTCTACTTACTCAGACAACCAGCCTGGTGTGTTGA 37609102 Query 552439 TTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTA 552498 | ||| | | ||||| || ||| || ||||| ||||| | || || | ||| Sbjct 37609103 TCCAAGTCTACGAAGGTGAGAGAGCCAGAACCAAAGACAATAACCTCCTCGGAAAGTTTG 37609162 Query 552499 ATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATA 552558 | | || || ||||||||||| ||||| || || || || || |||||| | Sbjct 37609163 AGCTCTCTGGCATCCCTCCTGCTCCACGTGGTGTCCCTCAGATCACTGTCTGTTTCGACA 37609222 Query 552559 TCGATGCCAATGGAATTTTGAATGTGACTGC 552589 | ||||| |||||||| | ||||| |||| Sbjct 37609223 TTGATGCTAATGGAATCCTCAATGTCTCTGC 37609253 Score = 102 bits (112), Expect = 7e-16 Identities = 94/119 (79%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 549995 ATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTT 550054 ||||| |||||| | || ||||| || |||||||||||||| | || ||| | ||| Sbjct 14334443 ATAGGGATAGATCTTGGTACCACCTACTCTTGTGTTGGTGTTTACAAGAACGGTCATGTT 14334502 Query 550055 GAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGA 550113 ||||| ||||||||||| ||||||||| | | |||||| |||| ||| ||||||| || Sbjct 14334503 GAAATCATTGCCAATGACCAAGGTAACCGTATTACTCCTTCTTGGGTTGCTTTCACCGA 14334561 Score = 96.9 bits (106), Expect = 3e-14 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 ||||| ||||| || || || ||||| || ||||||||||| || || ||||| || Sbjct 37608211 ACTGTCCCAGCTTACTTCAACGACTCTCAGCGTCAAGCTACAAAGGACGCTGGTGTCATC 37608270 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 || || || ||||| | ||||| ||||| || || |||||||| || |||| ||||| Sbjct 37608271 GCCGGTCTGAATGTGATGCGTATCATCAACGAGCCGACTGCTGCGGCCATTGCTTATGGT 37608330 Query 550529 CTTGATAA 550536 |||||||| Sbjct 37608331 CTTGATAA 37608338 >seq6 Length=53636577 Score = 125 bits (138), Expect = 6e-23 Identities = 352/534 (66%), Gaps = 5/534 (1%) Strand=Plus/Minus Query 552060 ATTGAACCAGTAGAACAAGT-TTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGA 552118 || ||||| || || |||| ||| ||||| | ||||| ||||| ||| || ||||| Sbjct 3806020 ATGGAACCCGTGGAG-AAGTGTTTGAGAGACGCGAAGATGGATAAGAGCAATGTTCATGA 3805962 Query 552119 AATTGTGCTTGTTGGTGGA-TCTACAAGAATTCCTAAAATTCGCGAAATGTTAAGTTCTT 552177 ||||||||||||| || || || || || ||||| | | | |||| || Sbjct 3805961 CGTTGTGCTTGTTGGGGGGGTCCACTAGGATCCCTAAGGTCCAGCAGCTGTTGCAGGATT 3805902 Query 552178 ATTTCAATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTG 552237 ||| ||||| || | | | | ||| |||| || || ||||||||||| ||||| | Sbjct 3805901 TTTTTAATGGGAAGGAGCTTTGTAAGAGTATTAACCCGGACGAGGCTGTTGCTTATGGAG 3805842 Query 552238 CCGCAATTCAAGCAGCTATTCTTTCTGGACAAACTGATGAAAAACTACAAAATATTGTAC 552297 | || |||| || || ||||| ||| || |||| || | || || | | | Sbjct 3805841 CGGCGGTTCAGGCGGCGATTCTGAGTGGGGAAGGGAATGAGAAGGTTCAGGATTTGTTGC 3805782 Query 552298 TTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATC 552357 || | |||||||| ||| | || | || || || || | ||| ||| | |||||| | Sbjct 3805781 TTCTTGATGTTACGCCTTTGTCCTTGGGGTTGGAGACTGCTGGTGGTGTGATGACTGTTT 3805722 Query 552358 TTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAG 552417 | || || || || || ||||| || ||| | | || || || ||||| | Sbjct 3805721 TGATTCCGAGGAACACAACGATTCCGACGAAGAAAGAGCAGATCTTCTCGACTTATTCGG 3805662 Query 552418 ATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATA 552477 |||| || | | |||| || ||| ||| |||||||| ||| | || ||||||| Sbjct 3805661 ATAACCAGCCCGGTGTTTTGATCCAAGTTTACGAAGGAGAGAGAGCAAGGACGAAAGATA 3805602 Query 552478 ATAATCAACT-TGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCG 552536 | || | | || | ||| | |||| || || |||||||| ||||| || || ||| Sbjct 3805601 ACAACCTTTTGGGGAAGTTTGAGCTTAG-CGGCATCCCTCCTGCACCTCGAGGTGTTCCG 3805543 Query 552537 CAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCT 552590 || || || ||| || ||||| ||||| || || ||||| ||| | ||| Sbjct 3805542 CAGATCACTGTGTGTTTTGACATCGACGCCAACGGTATCTTGAACGTGTCGGCT 3805489 >seq5718 Length=3212 Score = 116 bits (128), Expect = 3e-20 Identities = 548/851 (64%), Gaps = 22/851 (3%) Strand=Plus/Minus Query 551735 TGACGTAACTCTTCTATCTCTCGAAGATGGTCTCTTTTCTGTATTAGCTACTAGTGGAGA 551794 ||| || ||||||| || ||||||| ||| |||| || ||||| |||||| Sbjct 2831 TGATGTTTCTCTTCTTACTATCGAAGAAGGTATCTTCGAGGTGAAGGCTACCGCTGGAGA 2772 Query 551795 TTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTGTTGAAGAT 551852 ||||||||||||| ||||| ||||| || ||| |||| | ||| | ||| |||| Sbjct 2771 CACTCATCTTGGTGGTGAAGACTTTGACAACAGAATGGTGAACCAT--TTTGTCCAAGAG 2714 Query 551853 TTTAAACGAAAAAACAAAGTTGATCTAT-CTACATCTGCCAAAGCTCTTCGTCGTCTAAG 551911 ||||| | || | ||| || || | | | | | |||| | | | | || Sbjct 2713 TTTAAGAGGAAGAGCAAGAAGGACATAAGCGGTAACC-CGAGAGCTTTGAGGAGGTTGAG 2655 Query 551912 AACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGT 551971 |||||| ||||| ||||| || | |||| || || |||||||||| || || | Sbjct 2654 AACTGCCTGCGAGAGAGCAAAGAGGACTCTCTCTTCCACCGCTCAAACCACCATCGAGAT 2595 Query 551972 AGATTCATTATTTGAGGGAATTGA-TTATAATACGC-CTATTTCGAGGGCCAAATTTGAA 552029 || || | ||||| || ||||| || || | || || ||| | ||| || || Sbjct 2594 TGACTCTCTCTTTGAAGGGATTGACTTCTACTCTGCACTCACTCGCG--CCAGGTTCGAG 2537 Query 552030 GATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTT-TAAGAGA 552088 || | ||||| || ||||| || || ||||| || |||| | || | || Sbjct 2536 GAGCTCAACATGGATCTTTTCAGAAAGTGTATGGAGCCAGTTGAG-AAGTGTCTACGTGA 2478 Query 552089 TTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAAT 552148 | | ||||| || || | ||| || || |||| || || ||||| |||||| | || Sbjct 2477 TGCTAAGATGGACAAGAGTACAGTCCACGATGTTGTCCTCGTCGGTGGCTCTACACGTAT 2418 Query 552149 TCCTAAAATTCGCGAAATGTT--AAGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGT 552206 || || ||| | | | ||| ||| || |||||| ||| | | || |||| Sbjct 2417 CCCCAAGGTTCAACAGCTTCTCCAAGA-CTTCTT-CAATGGCAAAGAGCTC--TGCAAGT 2362 Query 552207 G--TTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTG 552264 |||| || || ||||||||||| || || || || |||||| ||||||||| | Sbjct 2361 CCATTAACCCTGACGAGGCTGTTGCTTACGGAGCAGCTGTTCAAGGAGCTATTCTGAGCG 2302 Query 552265 GACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTG 552324 | || | || || | ||| | || | || | || || |||||||| ||||||| Sbjct 2301 GCGAAGGGAACGAGAAGGTGCAAGACCTTCTTCTGTTGGACGTGACTCCTCTCTCTCTTG 2242 Query 552325 GTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTT 552384 || | ||||| | ||| || | ||||| | | ||| | || || ||||| || || Sbjct 2241 GTCTCGAAACCGCTGGTGGAGTCATGACCACCTTGATCCAGAGGAACACTACGATCCCCA 2182 Query 552385 GTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAA 552444 || || | || || || || || || || || || ||| ||| |||||| Sbjct 2181 CCAAGAAGGAACAGGTCTTCTCCACTTACTCTGACAACCAGCCTGGTGTGTTGATTCAAG 2122 Query 552445 TTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAG 552504 | | ||||| || ||| || ||||| || || | || |||| || | | Sbjct 2121 TCTACGAAGGTGAGAGAGCCAGAACCAAAGACAACAACCTCCTCGGTAAATTCGAGCTCT 2062 Query 552505 AAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGT-TACTTTCGATATCGAT 552563 || || ||||||||||| ||||| || || || || ||| | |||| || || || Sbjct 2061 CTGGCATCCCTCCTGCTCCCCGTGGTGTCCCTCAGATCACAGTCTGCTTT-GACATAGAC 2003 Query 552564 GCCAATGGAAT 552574 || |||||||| Sbjct 2002 GCAAATGGAAT 1992 >seq9 Length=38354807 Score = 105 bits (116), Expect = 5e-17 Identities = 161/225 (72%), Gaps = 12/225 (5%) Strand=Plus/Plus Query 563256 GAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 ||| | ||| |||||||||||||| ||| | ||||| || ||||| ||||| |||| Sbjct 21316030 GAGCCTGAGGACAAGATGAAGGGTCGACTCTTTTTGG--ATGTTGTAGTCAGCGAGAGCA 21316087 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | |||||||||||| || ||||| || ||||| || ||| |||| || ||||| ||| Sbjct 21316088 CGCCCATCTTCAAGTTGCTTCCCGGCGAAGATAAGCCTCTGCCGATCCGGGGGAATGCCT 21316147 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAG---TACA-TTC 563429 || || || ||||| || ||| || || || || || |||| | || || Sbjct 21316148 TCCTTGTCCTGAATCTTCGCTTTAACGTTGTCGATGGT----GTCTGAGCTTTCCACCTC 21316203 Query 563430 GAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 ||| || | || || || || ||||| |||||||| || ||||| Sbjct 21316204 GAGGGTGATTGTCTTTCCCGTGAGAGTCTTAACGAATATCTGCAT 21316248 >seq92 Length=51219 Score = 104 bits (114), Expect = 2e-16 Identities = 127/171 (74%), Gaps = 2/171 (1%) Strand=Plus/Minus Query 549995 ATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTT 550054 ||||| |||||| | || ||||| || |||||||||||||| | |||||| | ||| Sbjct 31580 ATAGGGATAGATCTTGGTACCACCTACTCTTGTGTTGGTGTTTACAAGAATGGTCATGTT 31521 Query 550055 GAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAA 550114 ||||| ||||||||||| ||||| ||| | | |||||| || | ||| ||||||| || Sbjct 31520 GAAATCATTGCCAATGACCAAGGCAACCGTATTACTCCTTCATGGGTTGCTTTCACCGAC 31461 Query 550115 ACTG-AACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCC 550164 | | || | ||| ||||||| || || || | || || ||| ||| || Sbjct 31460 TCGGAAAGACTTA-TTGGTGAGGCTGCTAAGAACCAGGCTGCTGTTAACCC 31411 Score = 86.0 bits (94), Expect = 5e-11 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 550416 CAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGAC 550475 |||| || || || || | || | || ||||| || |||||||| ||||||||| | Sbjct 30986 CAGCTTACTTCAACGATGCCCAGAGGCAGGCTACAAAGGATGCTGGTGTTATTGCTGGTC 30927 Query 550476 TTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATA 550535 | |||||| | || ||||| ||||| ||||||||||| |||| ||||| ||||||| Sbjct 30926 TCAATGTTGCCAGAATAATCAACGAACCCACTGCTGCTGCTATTGCCTATGGTCTTGATA 30867 Query 550536 AA 550537 || Sbjct 30866 AA 30865 >seq8 Length=29681327 Score = 100 bits (110), Expect = 2e-15 Identities = 350/544 (64%), Gaps = 2/544 (0%) Strand=Plus/Minus Query 552042 GATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTCAAAGATTGAT 552101 ||||| || || || || || || || || | ||| | ||||| | ||||||||| Sbjct 3236625 GATCTGTTCAGGAAGTGTATGGACCCCGTGGAGAAGGTTCTTAGAGACGCCAAGATTGAT 3236566 Query 552102 AAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTC-G 552160 || | || || || | || |||||||| ||||| || || ||||| || |||| | Sbjct 3236565 AAGAACCGTGTCCACGAGGTGGTTCTTGTTGGAGGATCGACGAGGATTCCGAAGATTCAG 3236506 Query 552161 CGAAATGTTAAGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGA 552220 | | | || || || ||| || || | | | | || |||| || || || Sbjct 3236505 CAGCTTCTGCAGGATTTCTT-CAACGGGAAGGAGCTTTGTAAGAGCATTAACCCCGACGA 3236447 Query 552221 GGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAACTGATGAAAA 552280 |||||||| ||||| || || | || || || ||||| |||| || ||| || Sbjct 3236446 AGCTGTTGCGTATGGAGCTGCCGTGCAGGCTGCGATTCTGACTGGTGAAGGGAGTGATAA 3236387 Query 552281 ACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGG 552340 | || || | | ||| | || || | || | |||||| ||||| || | ||| Sbjct 3236386 GGTGCAGGATCTGCTGCTTCTTGACGTGGCGCCGTTGAGTCTTGGATTAGAGACGGCTGG 3236327 Query 552341 AGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGT 552400 || | |||||| | ||| || || || || |||||||||| || | || Sbjct 3236326 TGGGGTGATGACTGTGTTGATCCCGAGGAACACGACGGTTCCTTGTAAGAAGGAGCAGGT 3236267 Query 552401 ATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAG 552460 || || |||||||| ||||| || | | |||| |||||| | | ||| ||||| | Sbjct 3236266 GTTCTCCACGTATTCGGATAACCAGCCGGGTGTTTTGATTCAAGTGTATGAGGGAGAGCG 3236207 Query 552461 AAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGC 552520 || | ||| || || | || || || ||| | | |||| || |||||||| Sbjct 3236206 TGCGAGGACGAGAGACAACAACCTTCTCGGAACGTTTGAGCTCAAAGGGATCCCTCCTGC 3236147 Query 552521 TCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAA 552580 ||| |||||||| || || || | || ||| ||||| || || || || || ||||| Sbjct 3236146 TCCGCGTGGAGTTCCTCAGATCAATGTGTGTTTTGATATTGACGCTAACGGGATCTTGAA 3236087 Query 552581 TGTG 552584 ||| Sbjct 3236086 CGTG 3236083 Score = 93.3 bits (102), Expect = 3e-13 Identities = 110/148 (74%), Gaps = 1/148 (1%) Strand=Plus/Plus Query 550387 AGAAG-TTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAG 550445 ||||| |||| | || || | ||||| || || || ||||||||||| || | | Sbjct 9928175 AGAAGGTTACCAAGGCTGTTGTTACTGTGCCTGCTTACTTTAATGACTCGCAGAGGACGG 9928234 Query 550446 CTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTA 550505 |||| ||||||||||| || |||||||| | | |||||||||||||| ||||| || | Sbjct 9928235 CTACGAAAGATGCTGGGCGCATTGCTGGGTTGGAGGTTCTTCGTATTATTAATGAGCCCA 9928294 Query 550506 CTGCTGCTGCACTTGCATATGGACTTGA 550533 | |||||| | | || ||||| |||| Sbjct 9928295 CGGCTGCTTCGTTGGCTTATGGGTTTGA 9928322 Score = 93.3 bits (102), Expect = 3e-13 Identities = 110/148 (74%), Gaps = 1/148 (1%) Strand=Plus/Plus Query 550387 AGAAG-TTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAG 550445 ||||| |||| | || || | ||||| || || || ||||||||||| || | | Sbjct 9946240 AGAAGGTTACCAAGGCTGTTGTTACTGTGCCTGCTTACTTTAATGACTCGCAGAGGACGG 9946299 Query 550446 CTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTA 550505 |||| ||||||||||| || |||||||| | | |||||||||||||| ||||| || | Sbjct 9946300 CTACGAAAGATGCTGGGCGCATTGCTGGGTTGGAGGTTCTTCGTATTATTAATGAGCCCA 9946359 Query 550506 CTGCTGCTGCACTTGCATATGGACTTGA 550533 | |||||| | | || ||||| |||| Sbjct 9946360 CGGCTGCTTCGTTGGCTTATGGGTTTGA 9946387 >seq4 Length=50002108 Score = 91.5 bits (100), Expect = 1e-12 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 ||||| || || || ||||||||||| || | ||||| ||||||||||| | ||| Sbjct 5142445 ACTGTGCCTGCTTACTTTAATGACTCGCAGAGGACGGCTACGAAAGATGCTGGGAGGATT 5142386 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 ||||| | | |||||||||||||||||||| || || |||||| | | || ||||| Sbjct 5142385 GCTGGGTTGGAAGTTCTTCGTATTATCAATGAGCCGACGGCTGCTTCTTTGGCTTATGGG 5142326 Query 550529 CTTGA 550533 |||| Sbjct 5142325 TTTGA 5142321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028731404971240