Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raphanus_20sativus_20[refseq_20GCF_5F000801105.1_202015-09-29] 10,676 sequences; 426,614,037 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq7 127 2e-24 seq3 125 6e-24 seq9 122 7e-23 seq6 118 8e-22 seq1946 109 4e-19 seq5 109 4e-19 seq4 105 5e-18 >seq7 Length=27187321 Score = 127 bits (140), Expect = 2e-24 Identities = 160/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| ||||| | ||| ||||| || ||||| |||||||| |||||||||| || || Sbjct 639671 ACGAAGCACAAGATGCAGCGTAGACTCTTTCTGAATGTTGTAATCCGCAAGAGTACGTCC 639730 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || || || || || || || | || | |||||| || || || || ||||||||||| Sbjct 639731 GTCTTCTAGCTGCTTCCCGGCGAAGATAAGTCTTTGTTGGTCTGGTGGGATACCCTCTTT 639790 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 ||| || ||| |||| ||||| | || | |||||||| || || || | ||| | Sbjct 639791 GTCCTG-AATCTTTGCCTTGACGTTATCGATCGTGTCAGAGCTCTCCACCTCCAAAGTGA 639849 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | ||||||||||| | ||| || ||||| |||||||| Sbjct 639850 TGGTTTTGCCAGTGAGGGTCTTCACAAAAATCTGCAT 639886 Score = 102 bits (112), Expect = 6e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||||| || | |||||||| || || || || ||||| || || || | |||||| Sbjct 640127 ACGCAAGACAAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCAGCGAGCGTGCGACC 640186 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || || |||||| | || | || ||||||||||| || || || || || Sbjct 640187 ATCCTCCAGCTGCTTACCAGCAAAAATAAGCCTCTGCTGATCCGGAGGGATGCCTTCCTT 640246 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| |||| || |||||| | || | |||||| || || || || ||||| || Sbjct 640247 GTCCTGTATCTTCGCCTTGACATTGTCAATAGTGTCGGAGCTCTCAACCTCGAGAGTGAT 640306 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || || || || || |||||||| Sbjct 640307 GGTCTTTCCCGTCAAAGTCTTGACGAAGATCTGCAT 640342 Score = 95.1 bits (104), Expect = 9e-15 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || ||||| | ||| ||||| || ||||| |||||||| || || || | ||||| | Sbjct 639900 CGAAGCACAAGATGCAGCGTAGACTCTTTCTGAATGTTGTAGTCAGCTAGCGTGCGTCCA 639959 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || || || || || ||| | || | || ||||| ||||| || ||||||||||| Sbjct 639960 TCCTCCAGCTGCTTACCGGCAAAGATGAGCCTCTGCTGGTCCGGTGGGATACCCTCTTTA 640019 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 || || | || ||||| | || | ||||| || || || || | ||| || Sbjct 640020 TCCTGGATCTTAGCCTTGACGTTATCAATGGTGTCTGAGCTCTCAACCTCCAAAGTAATG 640079 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || || | ||| || ||||| || ||||| Sbjct 640080 GTTTTACCGGTGAGGGTCTTGACAAAGATTTGCAT 640114 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 || || | |||||| ||||| ||||| || ||||| ||||| |||| || | ||| Sbjct 456693 AGGACGAGATGAAGAGTGGACTCTTTGTGGATGTTGTAATCAGCAAGAGTCCTGCCATCT 456634 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 ||||| || || || || | ||||| || |||||||| || || ||||| || || || Sbjct 456633 TCGAGCTGCTTACCGGCGAAGATCAACCTCTGCTGATCGGGAGGGATACCTTCCTTATCC 456574 Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754 || | || ||| || | || | ||||| || | || || || || || || Sbjct 456573 TGGATCTTGGCTTTAACGTTGTCGATCGTGTCGGAGCTTAACACCTCGAGGGTGATCGTC 456514 Query 29755 TTGCCAGTTAAG-GTTTTAACAAATATCTGCAT 29786 || | || |||| || ||||| ||||||||||| Sbjct 456513 TTTC-AGGTAAGAGTCTTAACGAATATCTGCAT 456482 >seq3 Length=29132933 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | || ||||| |||||| |||||||| || ||||| || ||||||||||| || Sbjct 9517120 CCTCCACGCAGACGCAACACCAAGTGAAGCGTAGACTCTTTCTGGATGTTATAATCAGCC 9517061 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | | || || || || || ||||| |||||||||| ||||| ||||| || Sbjct 9517060 AATGTTCTACCGTCCTCAAGCTGCTTTCCAGCGAATATCAATCTCTGCTGGTCCGGAGGG 9517001 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 |||||||| ||||| || | || ||||| | || | ||||| || || || Sbjct 9517000 ATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCCCTCAACC 9516941 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | ||| || || || || || || || || ||||| |||||||| Sbjct 9516940 TCCAAAGTAATGGTCTTTCCGGTCAAAGTCTTGACAAAGATCTGCAT 9516894 Score = 105 bits (116), Expect = 5e-18 Identities = 155/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || ||||| ||||| || || || || || ||||| || || || | ||||||| Sbjct 2316324 ACGGAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCTGCTAAGGTGCGACC 2316383 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| ||||| || || ||||| | || | | ||||||||||| || || || || || Sbjct 2316384 ATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCCGGAGGGATGCCTTCCTT 2316443 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 ||| || ||| || | || || | || | |||||||| || || ||||| || | Sbjct 2316444 GTCCTG-AATCTTGGCCTTCACGTTGTCAATGGTGTCAGAGCTCTCCACCTCAAGTGTGA 2316502 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || || || || ||||| || ||||| |||||||| Sbjct 2316503 TGGTCTTACCGGTCAAGGTCTTCACAAAAATCTGCAT 2316539 Score = 105 bits (116), Expect = 5e-18 Identities = 155/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || ||||| ||||| || || || || || ||||| || || || | ||||||| Sbjct 2323898 ACGGAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCTGCTAAGGTGCGACC 2323957 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| ||||| || || ||||| | || | | ||||||||||| || || || || || Sbjct 2323958 ATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCCGGAGGGATGCCTTCCTT 2324017 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 ||| || ||| || | || || | || | |||||||| || || ||||| || | Sbjct 2324018 GTCCTG-AATCTTGGCCTTCACGTTGTCAATGGTGTCAGAGCTCTCCACCTCAAGTGTGA 2324076 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || || || || ||||| || ||||| |||||||| Sbjct 2324077 TGGTCTTACCGGTCAAGGTCTTCACAAAAATCTGCAT 2324113 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | | ||||| || | |||||||| || || || || ||||| || || || Sbjct 16258854 CCTCCACGTAGACGCAAGACAAGGTGAAGCGTAGACTCCTTCTGGATGTTGTAGTCGGCC 16258913 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| ||| ||| ||||| || || || || | || | | ||||||||||| || Sbjct 16258914 AAGGTTCGACCATCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGAGGG 16258973 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || || ||||| || | || ||| || | || | ||||| || ||| || Sbjct 16258974 ATCCCTTCCTTGTCCTGGATCTTGGCTTTCACGTTGTCGATGGTGTCGGAGCTTTCCACC 16259033 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || || || || || || || || | ||||| || || |||||||| || Sbjct 16259034 TCGAGGGTGATTGTCTTTCCCGTGAGAGTTTTCACGAAGATCTGCATCTT 16259083 >seq9 Length=38354807 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | | ||||| |||||||||||| || || |||||||||||||| ||||| || Sbjct 21327375 CCTCCACGTAGACGCAACACCAAATGAAGAGTCGACTCTTTTTGAATGTTGTAATCTGCC 21327434 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| ||| ||||| || || ||||| | || | | ||||| ||||| || Sbjct 21327435 AAAGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGG 21327494 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || ||||| |||||||| | || || || | || | ||||| ||| || || Sbjct 21327495 ATTCCCTCCTTGTCTTGGATCTTAGCCTTCACGTTGTCAATGGTGTCGGAACTCTCCACC 21327554 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| || || || || || | || ||||| || |||||||| Sbjct 21327555 TCCAGAGTGATGGTCTTCCCGGTCAGTGTCTTAACGAAGATCTGCAT 21327601 Score = 93.3 bits (102), Expect = 3e-14 Identities = 152/218 (70%), Gaps = 16/218 (7%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||||| |||||| ||||| || || || ||||||||||| || || || | ||| Sbjct 21315817 ACGCAACACCAAGTGAAGTGTAGACTCCTTTTGAATGTTGTAGTCAGCGAGAGTG----- 21315871 Query 29631 ATCAT--CGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCT 29688 ||| | |||| || || || ||| | | ||| || ||||| || || ||||| |||||| Sbjct 21315872 ATCCTGCCGAGCTGCTTTCCGGCAAAGACCAACCTCTGCTGGTCTGGAGGAATGCCCTCT 21315931 Query 29689 TTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTT 29748 |||||||| ||| || | || | || | || || || || || | ||| Sbjct 21315932 TTGTCTTG-AATCTTGGCTTTA--------ACGTTATCTGAGCTCTCCACCTCCAAAGTA 21315982 Query 29749 ATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || || |||| |||||| || || |||||||| Sbjct 21315983 ATAGTCTTTCCGGTTAGGGTTTTGACGAAGATCTGCAT 21316020 Score = 89.7 bits (98), Expect = 4e-13 Identities = 152/218 (70%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| ||||| | ||||| || || || ||||| ||||||||||| |||| || | Sbjct 8091295 ACGAAGCACAAGGTGAAGTGTTGACTCCTTTTGGATGTTATAATCTGCAAGCCTGTAACC 8091354 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || |||||| | | |||| |||| | ||| ||||| || || | || || || | Sbjct 8091355 ATCCTCCAGTTGTCTACTAGCAAATATGAGTCTCTGCTGGTCTGGTGCGATTCCTTCCAT 8091414 Query 29691 GTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 |||||| ||| ||||| || ||| | | || ||||| || || ||||| | | | Sbjct 8091415 GTCTTG-AATCTTTGTCTTTACACTGTAAACGGTGTCTGAGCTATCAACTTCTAAGGCAA 8091473 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 | ||| ||| | ||||| |||||||| |||||| Sbjct 8091474 TGACTTTAGAAGTGATTGTTTTCACAAATATTTGCATT 8091511 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 || || | |||||| || || |||||||| ||||| || || || | | || ||| Sbjct 21316037 AGGACAAGATGAAGGGTCGACTCTTTTTGGATGTTGTAGTCAGCGAGAGCACGCCCATCT 21316096 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || ||||| || || || | || | || ||| ||||||| ||||| || || ||||| Sbjct 21316097 TCAAGTTGCTTCCCGGCGAAGATAAGCCTCTGCCGATCCGGGGGAATGCCTTCCTTGTCC 21316156 Query 29695 TGTAATTTTTGTTTGACAGTT-TCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 || ||| || | || | ||| || | ||||| || ||| || || || || || || Sbjct 21316157 TG-AATCTTCGCTTTAACGTTGTCGATGGTGTCTGAGCTTTCCACCTCGAGGGTGATTGT 21316215 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || | || ||||| ||||||||||| Sbjct 21316216 CTTTCCCGTGAGAGTCTTAACGAATATCTGCAT 21316248 >seq6 Length=53636577 Score = 118 bits (130), Expect = 8e-22 Identities = 167/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 |||||| |||| || |||||||| |||||||| || || || || ||||| || ||||| Sbjct 30640176 TCCTCCTCTCAGGCGGAGCACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCCGC 30640117 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | || | || ||||| || || || || | |||| | ||||| ||||| || Sbjct 30640116 GAGCGTCCTCCCGTCTTCGAGCTGCTTCCCGGCGAAGATCAGACGCTGCTGGTCCGGTGG 30640057 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 || || || ||||| || ||| || | |||||| | || | ||||| || ||| | Sbjct 30640056 GATCCCTTCCTTGTCCTG-AATCTTGGCCTTGACATTGTCGATCGTGTCGGATGATTCGA 30639998 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 | || || ||||| || || || |||| |||||| ||||| ||||||||||| Sbjct 30639997 CCTCTAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCATTTT 30639946 >seq1946 Length=8506 Score = 109 bits (120), Expect = 4e-19 Identities = 140/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 29597 CTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATA 29656 |||| || ||||| || || || | ||||| ||| ||||| ||||| || || | | Sbjct 2158 CTTTCTGGATGTTGTAGTCAGCCAAAGTGCGGCCATCTTCGAGCTGTTTACCGGCGAAGA 2099 Query 29657 TCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTT 29716 ||| | ||||||||||| || ||||| ||||||||||| | || ||||||| | | Sbjct 2098 TCAGACGCTGCTGATCCGGAGGGATACCTTCTTTGTCTTGGATCTTGGCTTTGACATTGT 2039 Query 29717 CTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAA 29776 | | ||||| || || || || ||||| || || ||||| |||| |||||| || | Sbjct 2038 CGATGGTGTCGGAGGACTCGACCTCGAGAGTGATGGTCTTGCCGGTTAGGGTTTTCACGA 1979 Query 29777 ATATCTGCATTTT 29789 | |||||||| || Sbjct 1978 AGATCTGCATCTT 1966 >seq5 Length=45943323 Score = 109 bits (120), Expect = 4e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 |||||||| || | ||| || | ||| || || || ||||| || ||||| || || || Sbjct 16837808 CCTCCCCTTAACCTCAGAACAAGATGCAGAGTCGACTCTTTCTGGATGTTGTAGTCAGCC 16837867 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||||| ||| || || ||||| || | | ||||| || |||||||||| || Sbjct 16837868 AAGGTGCGACCATCCTCAAGCTGTTTTCCGGTGAAGATCAACCTCTGCTGATCCGATGGG 16837927 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || |||||||| || | || |||||| | || | |||||| || || Sbjct 16837928 ATTCCTTCTTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCACTGCTCTCCACC 16837987 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || || || || || ||||| || | ||||| || ||||||||||| || Sbjct 16837988 TCGAGGGTGATGGTCTTGCCCGTCAGTGTTTTCACGAATATCTGCATCTT 16838037 Score = 100 bits (110), Expect = 2e-16 Identities = 94/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 ||||| ||||| || || ||||| || ||||| || ||||||| ||| | | ||| || Sbjct 20718145 ACCAAGTGAAGAGTTGACTCTTTCTGGATGTTGTAGTCCGCAAGGGTTCTACCATCTTCA 20718204 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 |||||||||||||| |||||| || || |||||||| || || ||||| ||||| ||| Sbjct 20718205 AGTTGTTTGCCAGCGAATATCAGCCTCTGTTGATCCGGTGGTATTCCCTCCTTGTCCTGT 20718264 >seq4 Length=50002108 Score = 105 bits (116), Expect = 5e-18 Identities = 139/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 29597 CTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATA 29656 |||| || ||||| || || || | || || ||| ||||| ||||| || || | | Sbjct 45703485 CTTTCTGGATGTTGTAGTCAGCCAAAGTACGGCCATCCTCGAGCTGTTTACCGGCGAAGA 45703426 Query 29657 TCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTT 29716 ||||||| ||||||||||| || ||||| ||||||||||| | || |||||| | | Sbjct 45703425 TCAATCTCTGCTGATCCGGAGGGATACCTTCTTTGTCTTGGATCTTGGCCTTGACATTGT 45703366 Query 29717 CTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAA 29776 | | ||||| || || || || || || || || || || |||| |||||| || | Sbjct 45703365 CGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTTCCGGTTAGGGTTTTCACGA 45703306 Query 29777 ATATCTGCATTTT 29789 | |||||||| || Sbjct 45703305 AGATCTGCATCTT 45703293 Score = 104 bits (114), Expect = 2e-17 Identities = 137/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 29597 CTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATA 29656 |||| || ||||| || || || | || || ||| ||||| ||||| || || | | Sbjct 24965451 CTTTCTGGATGTTGTAGTCAGCCAAAGTACGGCCATCTTCGAGCTGTTTACCGGCGAAGA 24965392 Query 29657 TCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTT 29716 ||| | ||||||||||| || ||||| ||||||||||| | || ||||||| | | Sbjct 24965391 TCAGACGCTGCTGATCCGGAGGGATACCTTCTTTGTCTTGGATCTTGGCTTTGACATTGT 24965332 Query 29717 CTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAA 29776 | | ||||| || || || || ||||| || || ||||| |||| |||||| || | Sbjct 24965331 CGATGGTGTCGGAGGACTCGACCTCGAGAGTGATGGTCTTGCCCGTTAGGGTTTTCACGA 24965272 Query 29777 ATATCTGCAT 29786 | |||||||| Sbjct 24965271 AGATCTGCAT 24965262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385169077685316