Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raphanus_20sativus_20[refseq_20GCF_5F000801105.1_202015-09-29] 10,676 sequences; 426,614,037 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq3 125 6e-24 seq1946 118 9e-22 seq4 118 9e-22 seq7 113 4e-20 seq9 105 6e-18 seq6 98.7 8e-16 >seq3 Length=29132933 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| || | ||||| || | || | |||||| || || || || ||||||||| | Sbjct 16258854 CCTCCACGTAGACGCAAGACAAGGTGAAGCGTAGACTCCTTCTGGATGTTGTAGTCGGCC 16258913 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | || | || |||||||| || |||||| | ||||||||||| |||||||| || Sbjct 16258914 AAGGTTCGACCATCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGAGGG 16258973 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | || || || || ||||||| ||||| | | || | ||||| | | ||| || Sbjct 16258974 ATCCCTTCCTTGTCCTGGATCTTGGCTTTCACGTTGTCGATGGTGTCGGAGCTTTCCACC 16259033 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || | || ||||| ||||||||||| ||||| ||||| Sbjct 16259034 TCGAGGGTGATTGTCTTTCCCGTGAGAGTTTTCACGAAGATCTGCAT 16259080 Score = 111 bits (122), Expect = 1e-19 Identities = 149/205 (73%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 27044 ATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCA-TGTTGCGCTCGTCTTCGAGCT 27102 ||| | |||||| || || || || ||||||||| || |||| || |||||||||||| Sbjct 9516869 ATGAAGCGTAGACTCCTTCTGGATGTTGTAGTCGGCCAATGTTCTGC-CGTCTTCGAGCT 9516811 Query 27103 GTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCT 27162 | || |||||| | ||||| | ||| |||||||| || | ||| || || || ||||| Sbjct 9516810 GCTTGCCGGCGAAGATGAGCCTCTGCTGATCCGGAGGGATACCTTCCTTGTCCTGGATCT 9516751 Query 27163 TGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCG 27222 || ||| | | | || | ||||| | | ||| || || || || || | || |||| Sbjct 9516750 TGGCTTTGACGTTGTCGATGGTGTCGGAGCTTTCCACCTCGAGGGTGATGGTCTTTCCCG 9516691 Query 27223 TCAGAGTTTTCACAAAGATTTGCAT 27247 | ||||| || || ||||| ||||| Sbjct 9516690 TGAGAGTCTTAACGAAGATCTGCAT 9516666 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 ||||| ||||| || | || || ||||| || || ||||||||| | | | || | Sbjct 9517336 CGCAACACCAAGTGAAGGGTCGACTCTTTCTGGATGTTGTAGTCGGCTAAGGTACGACCA 9517277 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 || |||||||| || || ||| | |||||||| || || ||||| || | || || ||| Sbjct 9517276 TCCTCGAGCTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCCGGAGGAATGCCTTCCTTA 9517217 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||||||| || | | || | ||||| | | || || || || || || Sbjct 9517216 TCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCAGAGCTCTCCACCTCCAGTGTGATG 9517157 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | ||||| || || || ||||||||||| ||||| Sbjct 9517156 GTCTTGCCGGTAAGTGTCTTCACAAAGATCTGCAT 9517122 Score = 86.0 bits (94), Expect = 5e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTC 27097 ||||| || | || || || || || || |||||||| ||| | || ||| | || || Sbjct 2316331 ACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCTGCTAAGGT-GCGACCATCCTC 2316389 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 |||||| || || ||| | ||||||||||| |||||||| || | || || || || Sbjct 2316390 GAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCCGGAGGGATGCCTTCCTTGTCCTG 2316449 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 |||||| |||| | | || | ||||| | | || || || || || || | || Sbjct 2316450 AATCTTGGCCTTCACGTTGTCAATGGTGTCAGAGCTCTCCACCTCAAGTGTGATGGTCTT 2316509 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || |||| || |||||||| || |||||| Sbjct 2316510 ACCGGTCAAGGTCTTCACAAAAATCTGCATA 2316540 Score = 86.0 bits (94), Expect = 5e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTC 27097 ||||| || | || || || || || || |||||||| ||| | || ||| | || || Sbjct 2323905 ACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCTGCTAAGGT-GCGACCATCCTC 2323963 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 |||||| || || ||| | ||||||||||| |||||||| || | || || || || Sbjct 2323964 GAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCCGGAGGGATGCCTTCCTTGTCCTG 2324023 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 |||||| |||| | | || | ||||| | | || || || || || || | || Sbjct 2324024 AATCTTGGCCTTCACGTTGTCAATGGTGTCAGAGCTCTCCACCTCAAGTGTGATGGTCTT 2324083 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || |||| || |||||||| || |||||| Sbjct 2324084 ACCGGTCAAGGTCTTCACAAAAATCTGCATA 2324114 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | || || || || || || ||||| || || | |||| | || ||| Sbjct 16258416 ACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCAGCCAAGGTGCGACCATCCTCG 16258475 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| || || ||| | ||||||||||| || ||||| || | || || || || | Sbjct 16258476 AGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGG 16258535 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 |||||| ||| | | || | ||| || | | || || || | ||| |||| || Sbjct 16258536 ATCTTGGCTTTGACATTGTCAATAGTATCCGAGCTCTCCACCTCCAAAGTAATAGTCTTT 16258595 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || |||| ||| || |||||||| |||||| Sbjct 16258596 CCAGTCAAAGTCTTGACAAAGATCTGCATA 16258625 >seq1946 Length=8506 Score = 118 bits (130), Expect = 9e-22 Identities = 140/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 27058 CTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAA 27117 |||| || || |||||||| || |||| | ||||||||||||||||||||| | | Sbjct 2158 CTTTCTGGATGTTGTAGTCAGCCAAAGTGCGGCCATCTTCGAGCTGTTTACCGGCGAAGA 2099 Query 27118 TGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTT 27177 | |||||||| |||||||| || | ||| ||||| || ||||||| ||| | | | Sbjct 2098 TCAGACGCTGCTGATCCGGAGGGATACCTTCTTTGTCTTGGATCTTGGCTTTGACATTGT 2039 Query 27178 CTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAA 27237 | | ||||| | || || || || ||||| || | ||||| || || |||||||| | Sbjct 2038 CGATGGTGTCGGAGGACTCGACCTCGAGAGTGATGGTCTTGCCGGTTAGGGTTTTCACGA 1979 Query 27238 AGATTTGCAT 27247 |||| ||||| Sbjct 1978 AGATCTGCAT 1969 >seq4 Length=50002108 Score = 118 bits (130), Expect = 9e-22 Identities = 140/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 27058 CTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAA 27117 |||| || || |||||||| || | || | ||||||||||||||||||||| | | Sbjct 24965451 CTTTCTGGATGTTGTAGTCAGCCAAAGTACGGCCATCTTCGAGCTGTTTACCGGCGAAGA 24965392 Query 27118 TGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTT 27177 | |||||||| |||||||| || | ||| ||||| || ||||||| ||| | | | Sbjct 24965391 TCAGACGCTGCTGATCCGGAGGGATACCTTCTTTGTCTTGGATCTTGGCTTTGACATTGT 24965332 Query 27178 CTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAA 27237 | | ||||| | || || || || ||||| || | |||||||| || |||||||| | Sbjct 24965331 CGATGGTGTCGGAGGACTCGACCTCGAGAGTGATGGTCTTGCCCGTTAGGGTTTTCACGA 24965272 Query 27238 AGATTTGCAT 27247 |||| ||||| Sbjct 24965271 AGATCTGCAT 24965262 Score = 82.4 bits (90), Expect = 6e-11 Identities = 132/190 (69%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 27058 CTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAA 27117 |||| || || |||||||| || | || | || |||||||||||||||||| | | Sbjct 45703485 CTTTCTGGATGTTGTAGTCAGCCAAAGTACGGCCATCCTCGAGCTGTTTACCGGCGAAGA 45703426 Query 27118 TGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTT 27177 | | | ||| |||||||| || | ||| ||||| || ||||||| || | | | Sbjct 45703425 TCAATCTCTGCTGATCCGGAGGGATACCTTCTTTGTCTTGGATCTTGGCCTTGACATTGT 45703366 Query 27178 CTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAA 27237 | | ||||| | || || || || || || || | || || || || |||||||| | Sbjct 45703365 CGATGGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTTCCGGTTAGGGTTTTCACGA 45703306 Query 27238 AGATTTGCAT 27247 |||| ||||| Sbjct 45703305 AGATCTGCAT 45703296 >seq7 Length=27187321 Score = 113 bits (124), Expect = 4e-20 Identities = 150/206 (73%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 27044 ATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTCGAGCT 27102 ||| | |||||| ||||| ||||| |||||||| ||| || ||| | || || |||| Sbjct 639911 ATGCAGCGTAGACTCTTTCTGAATGTTGTAGTCAGCTAGCGT-GCGTCCATCCTCCAGCT 639969 Query 27103 GTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCT 27162 | |||||||| | ||||| | ||| || ||||| || | |||||||||||| ||||| Sbjct 639970 GCTTACCGGCAAAGATGAGCCTCTGCTGGTCCGGTGGGATACCCTCTTTATCCTGGATCT 640029 Query 27163 TGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCG 27222 | || | | | || | ||||||| | ||||| || | ||| || | ||| || | Sbjct 640030 TAGCCTTGACGTTATCAATGGTGTCTGAGCTCTCAACCTCCAAAGTAATGGTTTTACCGG 640089 Query 27223 TCAGAGTTTTCACAAAGATTTGCATA 27248 | || || || ||||||||||||||| Sbjct 640090 TGAGGGTCTTGACAAAGATTTGCATA 640115 Score = 109 bits (120), Expect = 5e-19 Identities = 168/239 (70%), Gaps = 2/239 (1%) Strand=Plus/Plus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 |||| || | ||||| | || | ||| | || || || || || || ||||||||| Sbjct 640342 TGCCACCTCTCAACCTGAGAACGAGATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGG 640401 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 || | | || | || |||||||||||||||||| | ||||| | ||| || ||||| | Sbjct 640402 CCAAGGTACGTCCATCCTCGAGCTGTTTACCGGCGAAGATGAGCCTCTGCTGGTCCGGAG 640461 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | ||| || || || |||||| || | | | || | ||||| | | || | Sbjct 640462 GAATACCTTCCTTGTCCTGGATCTTAGCCTTGACGTTATCGATGGTGTCGGAGCTCTCGA 640521 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGCTAAA 27257 |||| ||||| || | ||||| || ||||||||||| || |||||||| |||| ||| Sbjct 640522 CTTCGAGAGTGATGGTCTTGCCGGTGAGAGTTTTCACGAAAATTTGCAT--CTGCAAAA 640578 >seq9 Length=38354807 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| || | ||||| |||||||| | || || ||||||||||| ||||| || | Sbjct 21327375 CCTCCACGTAGACGCAACACCAAATGAAGAGTCGACTCTTTTTGAATGTTGTAATCTGCC 21327434 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| | || |||||||| || || ||| | ||||||||||| || ||||| || Sbjct 21327435 AAAGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGG 21327494 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| || || |||||| |||| | | || | ||||| | || || Sbjct 21327495 ATTCCCTCCTTGTCTTGGATCTTAGCCTTCACGTTGTCAATGGTGTCGGAACTCTCCACC 21327554 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCT 27251 || ||||| || | || || ||||| || || || ||||| |||||| || Sbjct 21327555 TCCAGAGTGATGGTCTTCCCGGTCAGTGTCTTAACGAAGATCTGCATACCT 21327605 Score = 95.1 bits (104), Expect = 1e-14 Identities = 163/234 (70%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-G 27077 ||||||| |||| ||||| ||||| || | ||||| || ||||| ||||||||||| | Sbjct 21327145 TGCCTCCACGCAGACGCAACACCAAGTGAAGTGTAGACTCCTTTTGGATATTGTAGTCAG 21327204 Query 27078 CTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGC 27137 | || || |||| |||||||| || ||||| | || | | ||| || || || Sbjct 21327205 CGAGAGTCCTGC-CGTCCTCGAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCTGGA 21327263 Query 27138 GGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCA 27197 || | |||||| || || |||||| ||| | | || | ||||| | | ||| Sbjct 21327264 GGGATACCCTCCTTGTCTTGGATCTTAGCTTTGACATTATCAATGGTGTCGGAGCTCTCA 21327323 Query 27198 ACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCT 27251 ||||| || || || | || || || || || || |||||||| |||||| || Sbjct 21327324 ACTTCGAGGGTGATTGTCTTTCCGGTTAGTGTCTTGACAAAGATCTGCATACCT 21327377 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27024 CCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATG 27083 ||||||| || || ||||| || | || || ||||| ||||| ||||| || || | Sbjct 21315350 CCGCGCAGACGTAACACCAAGTGAAGGGTTGACTCTTTCTGAATGTTGTAATCAGCCAAG 21315409 Query 27084 TTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACA 27143 |||| | || || ||||| || || ||| | ||||||||||| || ||||| || | Sbjct 21315410 GTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGGATC 21315469 Query 27144 CCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCT 27203 ||||| || || |||||| || | | | || | ||||| | | || || || Sbjct 21315470 CCCTCCTTGTCCTGAATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCCACCTCC 21315529 Query 27204 AGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCT 27251 | ||| |||| || || ||||| || || | ||| || |||||| || Sbjct 21315530 AAAGTGATAGTCTTCCCGGTCAGTGTCTTAATAAAAATCTGCATACCT 21315577 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 ||||| ||||| || | || || || || || || ||||||||| | | |||| | Sbjct 21326931 CGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTGCGACCA 21326990 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 || || ||||| || || ||| | ||||||||||| ||||| || || | || || || Sbjct 21326991 TCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCTGGAGGGATCCCTTCCTTG 21327050 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||||||| ||||| | | || | ||||| | | || || || || || || Sbjct 21327051 TCTTGGATCTTGGCTTTCACGTTATCAATGGTGTCCGAGCTCTCCACCTCCAGTGTGATG 21327110 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || || |||| || || |||||||| ||||| Sbjct 21327111 GTCTTACCAGTCAAGGTCTTGACAAAGATCTGCAT 21327145 Score = 89.7 bits (98), Expect = 4e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTCGAGCTGTTTACC 27109 || || || || || ||||||||||| || | ||| || |||| |||||||| || || Sbjct 21328089 GTCGACTCCTTCTGGATATTGTAGTCAGCCAAGGTTCTGC-CGTCCTCGAGCTGCTTTCC 21328147 Query 27110 GGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTT 27169 |||| | || || | ||| |||||||| || | ||||| || || ||||||| ||| Sbjct 21328148 GGCGAAGATAAGCCTCTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCTTT 21328207 Query 27170 CAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGT 27229 | | | || | ||||||| | ||| || || || || || | || || || ||||| Sbjct 21328208 AACGTTGTCGATGGTGTCTGAGCTTTCCACCTCAAGGGTGATTGTCTTTCCGGTGAGAGT 21328267 Query 27230 TTTCACAAAGATTTGCAT 27247 || || || || ||||| Sbjct 21328268 CTTAACGAATATCTGCAT 21328285 Score = 86.0 bits (94), Expect = 5e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 ||||| ||||| || | || || || || || || ||||||||| | | |||| | Sbjct 21302934 CGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTGCGACCA 21302993 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 || || ||||| || || ||| | ||||||||||| ||||| || || | || || || Sbjct 21302994 TCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCTGGAGGGATCCCTTCCTTG 21303053 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||||||| ||||| | || | ||||| | | || || || || || || Sbjct 21303054 TCTTGGATCTTGGCTTTCACATTATCAATGGTGTCCGAGCTCTCCACCTCCAGTGTGATG 21303113 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || || |||| || || || ||||||||||| Sbjct 21303114 GTCTTACCAGTCAAGGTCTTGACGAAGATTTGCAT 21303148 >seq6 Length=53636577 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| | || || | ||||| || | ||| || || || || || |||||||| Sbjct 30640175 CCTCCTCTCAGGCGGAGCACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCG 30640116 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | | ||||||||||||| || |||||| | || |||||||| || ||||| || Sbjct 30640115 AGCGTCCTCCCGTCTTCGAGCTGCTTCCCGGCGAAGATCAGACGCTGCTGGTCCGGTGGG 30640056 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | || || || || |||||| || | | || | ||||| | | ||| || Sbjct 30640055 ATCCCTTCCTTGTCCTGAATCTTGGCCTTGACATTGTCGATCGTGTCGGATGATTCGACC 30639996 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||||| ||||| | || ||||| || |||||||||||||| ||||| Sbjct 30639995 TCTAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCAT 30639949 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424879110191712