Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raphanus_20sativus_20[refseq_20GCF_5F000801105.1_202015-09-29] 10,676 sequences; 426,614,037 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq9 129 4e-25 seq3 113 3e-20 seq7 111 1e-19 seq5 98.7 6e-16 >seq9 Length=38354807 Score = 129 bits (142), Expect = 4e-25 Identities = 164/221 (74%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTG--AAAGTGTTC 34546 ||||||||||||||||| ||||| ||| ||||||||||| ||||||| |||||| | Sbjct 21327384 AGACGCAACACCAAATGAAGAGTCGACTCTTTTTGAATGTTGTAATCTGCCAAAGTG--C 21327441 Query 34547 GCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCT 34606 | | || || || || || || || || || | |||||| |||||||| || | ||||| Sbjct 21327442 GACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGGATTCCCT 21327501 Query 34607 CCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACG 34665 |||||||| |||| || | || ||| | ||| ||||| |||||||| |||| Sbjct 21327502 CCTTGTCTTGGATC-TTAGCCTTCACGTTGTCAATGGTGTCGGAACTCTCCACCTCCAGA 21327560 Query 34666 GTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || || ||||| | || || || || |||||||| Sbjct 21327561 GTGATGGTCTTCCCGGTCAGTGTCTTAACGAAGATCTGCAT 21327601 Score = 129 bits (142), Expect = 4e-25 Identities = 156/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 ||||| ||||| ||| |||||| || ||||| || || | || |||| |||||||| Sbjct 21327849 ACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGAGTTCTGCCGTCTTCA 21327908 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 || || || |||||||| || || | ||| |||||||| || | ||||||||||| | Sbjct 21327909 AGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGGATCCCCTCCTTGTCCTGG 21327968 Query 34618 ATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 ||| |||| ||| ||| | ||| ||||| ||||||||| || | ||| || ||||| Sbjct 21327969 ATC-TTTGCTTTCACGTTGTCAATGGTGTCGGAGCTCTCCACCTCTAGGGTAATAGTTTT 21328027 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || || || || || |||||||| Sbjct 21328028 TCCCGTCAAGGTCTTAACGAAGATCTGCAT 21328057 Score = 122 bits (134), Expect = 5e-23 Identities = 160/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 |||||||||||||| || || || ||||||||| || || || || | || || | Sbjct 21303159 AGACGCAACACCAAGTGAAGTGTAGACTCCTTTTGGATATTGTAGTCAGCGAGAGTCCTG 21303218 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||| || || || || |||||||| || || | ||| ||||| || || | |||||| Sbjct 21303219 CCGTCCTCGAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCTGGAGGGATACCCTCC 21303278 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 |||||| |||| || | ||| || || ||| ||||| ||||||||| |||| || Sbjct 21303279 TTGTCTTGGATC-TTAGCTTTGACATTATCAATGGTGTCGGAGCTCTCCACCTCCAAAGT 21303337 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || ||||| || || || || ||||||||||| Sbjct 21303338 AATGGTCTTGCCGGTCAATGTCTTAACGAAAATCTGCAT 21303376 Score = 122 bits (134), Expect = 5e-23 Identities = 160/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 |||||||||||||| || || || ||||||||| || || || || | || || | Sbjct 21327156 AGACGCAACACCAAGTGAAGTGTAGACTCCTTTTGGATATTGTAGTCAGCGAGAGTCCTG 21327215 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||| || || || || |||||||| || || | ||| ||||| || || | |||||| Sbjct 21327216 CCGTCCTCGAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCTGGAGGGATACCCTCC 21327275 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 |||||| |||| || | ||| || || ||| ||||| |||||| ||||| | ||| Sbjct 21327276 TTGTCTTGGATC-TTAGCTTTGACATTATCAATGGTGTCGGAGCTCTCAACTTCGAGGGT 21327334 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || ||||||| || || ||||| |||||||| Sbjct 21327335 GATTGTCTTTCCGGTTAGTGTCTTGACAAAGATCTGCAT 21327373 Score = 120 bits (132), Expect = 2e-22 Identities = 160/220 (73%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 |||||||||||||| || || || |||||| || ||||| || || | || || || Sbjct 21326928 AGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTGCGA 21326987 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || ||||| || || || || || || | |||||| || || || || | || ||| Sbjct 21326988 CCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCTGGAGGGATCCCTTCC 21327047 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 |||||| |||| || | ||| ||| || ||| ||||| ||||||||| |||| || Sbjct 21327048 TTGTCTTGGATC-TTGGCTTTCACGTTATCAATGGTGTCCGAGCTCTCCACCTCCAGTGT 21327106 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || || ||||| || || || || ||||| ||||||||| Sbjct 21327107 GATGGTCTTACCAGTCAAGGTCTTGACAAAGATCTGCATG 21327146 Score = 105 bits (116), Expect = 4e-18 Identities = 157/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 |||||||||||||| || || || |||||| || ||||| || || | || || || Sbjct 21302931 AGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCTAGGGTGCGA 21302990 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || ||||| || || || || || || | |||||| || || || || | || ||| Sbjct 21302991 CCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCTGGAGGGATCCCTTCC 21303050 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 |||||| |||| || | ||| || || ||| ||||| ||||||||| |||| || Sbjct 21303051 TTGTCTTGGATC-TTGGCTTTCACATTATCAATGGTGTCCGAGCTCTCCACCTCCAGTGT 21303109 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || || ||||| || || || || || || || |||||| Sbjct 21303110 GATGGTCTTACCAGTCAAGGTCTTGACGAAGATTTGCATG 21303149 Score = 104 bits (114), Expect = 1e-17 Identities = 156/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| |||||||| || || || ||| || |||||||| ||||| | | || || Sbjct 21315356 AGACGTAACACCAAGTGAAGGGTTGACTCTTTCTGAATGTTGTAATCAGCCAAGGTGCGA 21315415 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || ||||| || || || || || || | |||||| |||||||| || | |||||| Sbjct 21315416 CCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGGATCCCCTCC 21315475 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| ||| || | || ||| | ||| ||||| ||||||||| |||| || Sbjct 21315476 TTGTC-CTGAATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCCACCTCCAAAGT 21315534 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || ||||| | || || | |||||||||||| Sbjct 21315535 GATAGTCTTCCCGGTCAGTGTCTTAATAAAAATCTGCAT 21315573 Score = 98.7 bits (108), Expect = 6e-16 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 34515 CTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAA 34574 ||||||||| ||||| || || | || || | |||||||||| || || || || || Sbjct 21303413 CTCCTTTTGGATGTTGTAGTCAGCGAGAGTCCTGCCGTCTTCAAGCTGCTTGCCTGCGAA 21303472 Query 34575 TATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGA 34634 || || | ||| |||||||| || | ||||||||||| |||| || | ||||||| Sbjct 21303473 GATCAACCTCTGCTGGTCCGGTGGGATCCCCTCCTTGTCCTGGATC-TTAGCTTTAACGT 21303531 Query 34635 T-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCA 34693 | || |||||| ||| ||||| || | ||| ||||| || ||||| | || || | Sbjct 21303532 TGTCGATGGTGTCTGAGCTTTCCACCTCGAGGGTGATCGTCTTTCCGGTGAGAGTCTTAA 21303591 Query 34694 CAAAAATCTGCAT 34706 | || || ||||| Sbjct 21303592 CGAAGATTTGCAT 21303604 Score = 98.7 bits (108), Expect = 6e-16 Identities = 154/218 (71%), Gaps = 12/218 (6%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 |||||||||||||| || || || ||||||||||||||| || || | || || | Sbjct 21315815 AGACGCAACACCAAGTGAAGTGTAGACTCCTTTTGAATGTTGTAGTCAGCGAGAGT--GA 21315872 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 || | | || || || |||||||| | || | ||| ||||| || || | ||||| Sbjct 21315873 TCCT-GCCGAGCTGCTTTCCGGCAAAGACCAACCTCTGCTGGTCTGGAGGAATGCCCTCT 21315931 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTT 34668 |||||| ||| || | ||||||| || ||| ||||||||| |||| || Sbjct 21315932 TTGTCT-TGAATCTTGGCTTTAACGTTA--------TCTGAGCTCTCCACCTCCAAAGTA 21315982 Query 34669 ATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || ||||||| ||||| || || |||||||| Sbjct 21315983 ATAGTCTTTCCGGTTAGGGTTTTGACGAAGATCTGCAT 21316020 Score = 82.4 bits (90), Expect = 5e-11 Identities = 151/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||| | || || || ||||||||| ||||||||||||| ||| | Sbjct 8091293 AGACGAAGCACAAGGTGAAGTGTTGACTCCTTTTGGATGTTATAATCTGCAAGCCTGTAA 8091352 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || |||||| ||| |||||||| | | ||| ||||| || | | ||| ||| Sbjct 8091353 CCATCCTCCAGTTGTCTACTAGCAAATATGAGTCTCTGCTGGTCTGGTGCGATTCCTTCC 8091412 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| ||| ||||| || || | ||| |||||| ||| || ||||| | || Sbjct 8091413 ATGTCT-TGAATCTTTGTCTTTACACTGTAAACGGTGTCTGAGCTATCAACTTCTAAGGC 8091471 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || |||| || | ||||||||||| || ||||| Sbjct 8091472 AATGACTTTAGAAGTGATTGTTTTCACAAATATTTGCAT 8091510 Score = 82.4 bits (90), Expect = 5e-11 Identities = 136/194 (70%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 34514 TCTCCTTTTGAATGTTATAATCTGAAAGTGT-TCGCTCGTCTTCAAGTTGTTTACCGGCA 34572 |||||||| | ||||||||||||| ||| | | || |||| ||| |||| ||| Sbjct 24731512 TCTCCTTTCGGATGTTATAATCTGCAAGCCTGTAACTATCCTTC-AGTACCCTACCAGCA 24731570 Query 34573 AATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC 34632 ||||| | | ||| | || || | || ||| |||| |||| |||||| |||| Sbjct 24731571 AATATGATTCTCTGGTCGTATGGTGCCATTCCTTCCTGGTCTTGAATCTTTGTCTTTACA 24731630 Query 34633 GATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTC 34692 | |||| |||||| |||||| ||||| | ||| || |||||||| || |||||| Sbjct 24731631 GTGTAAATGGTGTCTGAGCTCTCAACTTCTAAGGTAATGACTTTACCGGATAGTGTTTTC 24731690 Query 34693 ACAAAAATCTGCAT 34706 |||| || | ||| Sbjct 24731691 GCAAATATTTTCAT 24731704 >seq3 Length=29132933 Score = 113 bits (124), Expect = 3e-20 Identities = 158/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 |||||||||||||| || || || ||| || || ||||||||||| | | ||||| Sbjct 9517111 AGACGCAACACCAAGTGAAGCGTAGACTCTTTCTGGATGTTATAATCAGCCAATGTTCTA 9517052 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||| ||||| || || || || ||||| || | ||| |||||||| || | |||||| Sbjct 9517051 CCGTCCTCAAGCTGCTTTCCAGCGAATATCAATCTCTGCTGGTCCGGAGGGATACCCTCC 9516992 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| |||| || | || ||| | || ||||| || ||| || |||| || Sbjct 9516991 TTGTCCTGGATC-TTGGCCTTGACGTTGTCGATGGTGTCGGAGCCCTCAACCTCCAAAGT 9516933 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || ||||| || || || ||||| |||||||| Sbjct 9516932 AATGGTCTTTCCGGTCAAAGTCTTGACAAAGATCTGCAT 9516894 Score = 95.1 bits (104), Expect = 8e-15 Identities = 154/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||||| || || || |||||| || ||||| || |||| | || || Sbjct 2316322 AGACGGAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCTGCTAAGGTGCGA 2316381 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || || || || || || || || | |||||| || ||||| || | || ||| Sbjct 2316382 CCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCCGGAGGGATGCCTTCC 2316441 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| ||||| | || ||| | ||| ||||| ||||||||| || | || Sbjct 2316442 TTGTCCTGAATCTTG-GCCTTCACGTTGTCAATGGTGTCAGAGCTCTCCACCTCAAGTGT 2316500 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || |||||||| || || ||||||||||||||||| Sbjct 2316501 GATGGTCTTACCGGTCAAGGTCTTCACAAAAATCTGCAT 2316539 Score = 95.1 bits (104), Expect = 8e-15 Identities = 154/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 |||||||||||||| || || || |||||| || ||||| || |||| || || | Sbjct 2316787 AGACGCAACACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCTGCTAGAGTCCTT 2316846 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || ||||| || || |||||||| || | | ||| || ||||| || | || ||| Sbjct 2316847 CCATCCTCAAGCTGCTTCCCGGCAAAGATAAGCCTCTGCTGATCCGGAGGGATGCCTTCC 2316906 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 || || |||| || | |||||| | || ||||| ||| ||||| || | ||| Sbjct 2316907 TTATCCTGGATC-TTGGCCTTAACGTTGTCGATGGTGTCGGAGCTTTCCACCTCGAGGGT 2316965 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || || || | |||||||| || |||||||| Sbjct 2316966 GATGGTCTTTCCTGTGAGAGTTTTCACGAATATCTGCAT 2317004 Score = 95.1 bits (104), Expect = 8e-15 Identities = 154/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||||| || || || |||||| || ||||| || |||| | || || Sbjct 2323896 AGACGGAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCTGCTAAGGTGCGA 2323955 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || || || || || || || || | |||||| || ||||| || | || ||| Sbjct 2323956 CCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCCGGAGGGATGCCTTCC 2324015 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| ||||| | || ||| | ||| ||||| ||||||||| || | || Sbjct 2324016 TTGTCCTGAATCTTG-GCCTTCACGTTGTCAATGGTGTCAGAGCTCTCCACCTCAAGTGT 2324074 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || |||||||| || || ||||||||||||||||| Sbjct 2324075 GATGGTCTTACCGGTCAAGGTCTTCACAAAAATCTGCAT 2324113 Score = 95.1 bits (104), Expect = 8e-15 Identities = 154/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 |||||||||||||| || || || |||||| || ||||| || |||| || || | Sbjct 2324582 AGACGCAACACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCTGCTAGAGTCCTT 2324641 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || ||||| || || |||||||| || | | ||| || ||||| || | || ||| Sbjct 2324642 CCATCCTCAAGCTGCTTCCCGGCAAAGATAAGCCTCTGCTGATCCGGAGGGATGCCTTCC 2324701 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 || || |||| || | |||||| | || ||||| ||| ||||| || | ||| Sbjct 2324702 TTATCCTGGATC-TTGGCCTTAACGTTGTCGATGGTGTCGGAGCTTTCCACCTCGAGGGT 2324760 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || || || | |||||||| || |||||||| Sbjct 2324761 GATGGTCTTTCCTGTGAGAGTTTTCACGAATATCTGCAT 2324799 Score = 91.5 bits (100), Expect = 9e-14 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | ||||||||||||||| || || || ||| || || ||||| || || | Sbjct 9517348 CCACCACGAAGACGCAACACCAAGTGAAGGGTCGACTCTTTCTGGATGTTGTAGTCGGCT 9517289 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | || || | || || || || || || || || || | ||| || |||||||| || Sbjct 9517288 AAGGTACGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCCGGAGGA 9517229 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | || ||||| || |||| || | || || | ||| ||||| ||||||||| Sbjct 9517228 ATGCCTTCCTTATCCTGGATC-TTGGCCTTGACATTGTCAATGGTGTCAGAGCTCTCCAC 9517170 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 |||| || || || || ||||| | || |||||||| ||||||||| Sbjct 9517169 CTCCAGTGTGATGGTCTTGCCGGTAAGTGTCTTCACAAAGATCTGCATG 9517121 Score = 86.0 bits (94), Expect = 4e-12 Identities = 146/212 (69%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 34497 CACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTC 34556 |||||| || || || |||||| || ||||| || || | | || || | || || Sbjct 2324132 CACCAAGTGAAGTGTTGACTCCTTCTGGATGTTGTAGTCAGCCAAGGTGCGACCATCCTC 2324191 Query 34557 AAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGT 34616 ||| || || || || || || | |||||| |||||||| || | || |||||||| Sbjct 2324192 AAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTG 2324251 Query 34617 GATCTTTTGTTTTA-ACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTT 34674 ||||| ||| | ||| ||||| ||||||||| |||| || || || Sbjct 2324252 GATCTNNNNNNNNNNACGTTGTCAATAGTGTCGGAGCTCTCCACCTCCAAAGTGATAGTC 2324311 Query 34675 TTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || ||||| || || || |||||||||||||| Sbjct 2324312 TTTCCGGTCAAAGTCTTGACAAAAATCTGCAT 2324343 >seq7 Length=27187321 Score = 111 bits (122), Expect = 1e-19 Identities = 158/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||| | ||| || || ||| || |||||||| ||||| | ||| || || Sbjct 639669 AGACGAAGCACAAGATGCAGCGTAGACTCTTTCTGAATGTTGTAATCCGCAAGAGTACGT 639728 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 ||||||| || || || ||||| || || | | |||||||| || || | ||||| Sbjct 639729 CCGTCTTCTAGCTGCTTCCCGGCGAAGATAAGTCTTTGTTGGTCTGGTGGGATACCCTCT 639788 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| |||||| | || ||| || || ||||| ||||||||| |||| || Sbjct 639789 TTGTCCTGAATCTTT-GCCTTGACGTTATCGATCGTGTCAGAGCTCTCCACCTCCAAAGT 639847 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || ||||| || || | || |||||||||||||||||| Sbjct 639848 GATGGTTTTGCCAGTGAGGGTCTTCACAAAAATCTGCATG 639887 Score = 104 bits (114), Expect = 1e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| ||||| || || | ||| | ||| || || ||| || |||||||| || || | Sbjct 639887 GCCACCTCTGAGTCGAAGCACAAGATGCAGCGTAGACTCTTTCTGAATGTTGTAGTCAGC 639946 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || || | || || || || ||||||||||| || | | ||| |||||||| || Sbjct 639947 TAGCGTGCGTCCATCCTCCAGCTGCTTACCGGCAAAGATGAGCCTCTGCTGGTCCGGTGG 640006 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCA 34657 | ||||| || || |||| || | || ||| || ||| |||||| |||||| | Sbjct 640007 GATACCCTCTTTATCCTGGATC-TTAGCCTTGACGTTATCAATGGTGTCTGAGCTCTCAA 640065 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | |||| || || ||||||||||| | || || ||||| || ||||| Sbjct 640066 CCTCCAAAGTAATGGTTTTACCGGTGAGGGTCTTGACAAAGATTTGCAT 640114 Score = 102 bits (112), Expect = 5e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| | ||||| || ||||| ||||||||| || || || || | | Sbjct 639432 CCACCACGAAGACGAAGAACCAAGTGAAGAGTCGACTCCTTTTGGATATTGTAGTCAGCA 639491 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | || ||||| || |||||||| || || | | ||| || || || || Sbjct 639492 AGCGTGCGACCATCCTCAAGCTGCTTACCGGCGAAGATGAGTCTCTGCTGATCTGGTGGG 639551 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCAC 34658 | || |||||||| ||||| | || || || ||||||||| |||||| || Sbjct 639552 ATCCCTTCCTTGTCCTGAATCTTA-GCCTTGACATTATCGATTGTGTCTGAGCTCTCAAC 639610 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| || || ||||| ||||| | || || |||||||||||||| Sbjct 639611 CTCCAAAGTGATGGTTTTGCCGGTGAGGGTCTTAACAAAAATCTGCAT 639658 Score = 93.3 bits (102), Expect = 3e-14 Identities = 145/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 34503 ATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTG 34562 ||||||||| |||||| || ||||| || || | | || || | || || || || Sbjct 640367 ATGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTACGTCCATCCTCGAGCTG 640426 Query 34563 TTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTT 34622 ||||||||| || || | | ||| |||||||| || | || |||||||| |||| | Sbjct 640427 TTTACCGGCGAAGATGAGCCTCTGCTGGTCCGGAGGAATACCTTCCTTGTCCTGGATC-T 640485 Query 34623 TTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGG 34681 | | || ||| || || ||||| |||||| ||||| | || || || || |||| Sbjct 640486 TAGCCTTGACGTTATCGATGGTGTCGGAGCTCTCGACTTCGAGAGTGATGGTCTTGCCGG 640545 Query 34682 TTAACGTTTTCACAAAAATCTGCAT 34706 | | |||||||| ||||| ||||| Sbjct 640546 TGAGAGTTTTCACGAAAATTTGCAT 640570 Score = 84.2 bits (92), Expect = 1e-11 Identities = 160/233 (69%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 34478 CGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTG 34537 |||| || | ||||| | || | ||| || || |||||| || ||||| || || | Sbjct 18014049 CGCCACCGCGGAGACGGAGGACGAGATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGG 18014108 Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597 || || || ||||||| || ||||| ||||| || || | ||||| |||||||| | Sbjct 18014109 CGAGGGTGCGGCCGTCTTCCAGCTGTTTCCCGGCGAAGATCAGTCGCTGCTGGTCCGGTG 18014168 Query 34598 GCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCC 34656 | | |||||||||||| |||| || | || || | || ||||| || Sbjct 18014169 GGATTCCCTCCTTGTCCTGGATC-TTGGCCTTGACATTGTCGATGGTGTCGGATGATTCG 18014227 Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709 || || | ||| || || || || |||| |||||||| || |||||||| || Sbjct 18014228 ACCTCGAGGGTGATTGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 18014280 >seq5 Length=45943323 Score = 98.7 bits (108), Expect = 6e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || |||||||| | ||| ||||| || ||||| ||| || || ||||| || || | | Sbjct 20718127 CCACCTCTAAGCCTCAAGACCAAGTGAAGAGTTGACTCTTTCTGGATGTTGTAGTCCGCA 20718186 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || |||| | |||||||||||||| || || ||||| | | |||||| ||||| || Sbjct 20718187 AGGGTTCTACCATCTTCAAGTTGTTTGCCAGCGAATATCAGCCTCTGTTGATCCGGTGGT 20718246 Query 34600 ACTCCCTCCTTGTC 34613 | |||||||||||| Sbjct 20718247 ATTCCCTCCTTGTC 20718260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314688649351508