Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Raphanus_20sativus_20[refseq_20GCF_5F000801105.1_202015-09-29] 10,676 sequences; 426,614,037 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq5 156 4e-33 seq4 149 6e-31 seq9 129 5e-25 seq6 127 2e-24 seq7 120 3e-22 seq3 120 3e-22 >seq5 Length=45943323 Score = 156 bits (172), Expect = 4e-33 Identities = 177/232 (76%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || ||||| ||||| ||||||||| ||||| ||||||| | Sbjct 32128068 CCACCACGGAGACGGAGGACGAGATGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCG 32128009 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCC-GCGGG 41754 || ||||| |||| || |||||||| |||||||||||||| ||||| |||||| | ||| Sbjct 32128008 AGAGTGCGGCCGTCTTCCAGCTGCTTCCCGGCGAATATCAGTCGCTGCTGGTCCGGAGGG 32127949 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | | || ||||||||| || | || || | ||| | | | |||||| ||||| | Sbjct 32127948 ATCCCT-TCCTTGTCC-TGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGACTCGA 32127891 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 |||| | |||||||| |||||||| || || || ||||| |||||||| || Sbjct 32127890 CCTCGAGGGTTATCGTCTTACCCGTTAGGGTTTTCACGAAGATCTGCATCTT 32127839 >seq4 Length=50002108 Score = 149 bits (164), Expect = 6e-31 Identities = 166/219 (76%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| | ||||| || ||||| ||||||||| ||||| ||||||| ||||||||| Sbjct 49702177 AGACGGAGAACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGT 49702118 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 |||| ||||||||||| |||||||| || |||||||| ||||||| || | || ||| Sbjct 49702117 CCGTCCTCGAGCTGCTTTCCGGCGAAAATGAGGCGCTGCTGGTCCGGAGGGATGCCTTCC 49702058 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGT 41823 |||| | || | || || | ||| | | | |||||| ||||| ||||| | || Sbjct 49702057 TTGT-CTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGT 49701999 Query 41824 TATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||| || ||||| || || || ||||| |||||||| Sbjct 49701998 TATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 49701960 >seq9 Length=38354807 Score = 129 bits (142), Expect = 5e-25 Identities = 165/225 (73%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 41639 CCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGG 41698 ||||| ||||||||||||| || || || ||| ||||||||||| || || | | | Sbjct 21315350 CCGCGCAGACGTAACACCAAGTGAAGGGTTGACTCTTTCTGAATGTTGTAATCAGCCAAG 21315409 Query 41699 GTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACG 41758 ||||| | || || ||||||||||| ||||| || || ||||| ||||||| || | Sbjct 21315410 GTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGGATC 21315469 Query 41759 CTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTC 41817 | |||||||||| ||| | || || | ||| | | | |||||| ||||||||| Sbjct 21315470 CCCTCCTTGTCC-TGAATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCCACCTC 21315528 Query 41818 CACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || || || || || ||||| ||||| | ||||||||||| Sbjct 21315529 CAAAGTGATAGTCTTCCCGGTCAGTGTCTTAATAAAAATCTGCAT 21315573 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || |||||||| ||||||| ||| || || ||| || |||||||| || || | Sbjct 21327375 CCTCCACGTAGACGCAACACCAAATGAAGAGTCGACTCTTTTTGAATGTTGTAATCTGCC 21327434 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | ||||| | || ||||||||||| || ||||| || || ||||| ||||||| || Sbjct 21327435 AAAGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGG 21327494 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | ||||||||| ||| || |||| ||| | | | |||||| |||||| Sbjct 21327495 ATTCCCTCCTTGTCTTGGATCTTAGCCTTC-ACGTTGTCAATGGTGTCGGAACTCTCCAC 21327553 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| || || || || || ||||| ||||| ||||| |||||||| Sbjct 21327554 CTCCAGAGTGATGGTCTTCCCGGTCAGTGTCTTAACGAAGATCTGCAT 21327601 Score = 120 bits (132), Expect = 3e-22 Identities = 154/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 |||| || || ||| ||||||||| ||||| ||||| | ||| || | |||| || Sbjct 21327849 ACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGAGTTCTGCCGTCTTCA 21327908 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 |||||||||||||| || |||| | ||| ||||||| || | | |||||||||| || Sbjct 21327909 AGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGGATCCCCTCCTTGTCC-TG 21327967 Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832 | ||||||| ||| | | | |||||| ||||||||| | || || ||||| Sbjct 21327968 GATCTTTGCTTTCACGTTGTCAATGGTGTCGGAGCTCTCCACCTCTAGGGTAATAGTTTT 21328027 Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||||| ||||| ||||| |||||||| Sbjct 21328028 TCCCGTCAAGGTCTTAACGAAGATCTGCAT 21328057 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || |||||||| || |||| || ||||| ||||||||| ||||| ||||| | Sbjct 21327603 CCTCCACGTAGACGCAAGACCAAGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCAGCC 21327662 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | ||||| | || || | |||||||||||| || |||| | ||| ||||||| || Sbjct 21327663 AAAGTGCGACCATCTTCCAACTGCTTGCCGGCAAAGATCAATCTCTGCTGGTCCGGTGGG 21327722 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||| | | || | || |||| |||| | | | |||||| |||||| Sbjct 21327723 ATCCCCTCCTTAT-CTTGGATCTTAGCTTTAACGTTGTCAATGGTGTCGGAGCTCTCCAC 21327781 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| || || || || || |||| |||||| || || |||||||| Sbjct 21327782 CTCCAAAGTGATGGTCTTTCCGGTCAACGTCTTGACAAAGATCTGCAT 21327829 Score = 109 bits (120), Expect = 5e-19 Identities = 168/233 (72%), Gaps = 10/233 (4%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| ||||||| || || || ||||||||| ||||| ||||||| Sbjct 21326919 CCACCACGGAGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCT 21326978 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC-GGG 41754 |||||||| | || || |||||||| || ||||| || || ||||| || || | ||| Sbjct 21326979 AGGGTGCGACCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCTGGAGGG 21327038 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAG-TGTCGCTCGA---CT 41810 | | || |||||||| ||| || |||| ||| || | |||| ||| || Sbjct 21327039 ATCCCT-TCCTTGTCTTGGATCTTG-GCTTTCACGTTATCAATGGTGTC---CGAGCTCT 21327093 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||||||| || || || ||||| |||| ||||| || || ||||||||| Sbjct 21327094 CCACCTCCAGTGTGATGGTCTTACCAGTCAAGGTCTTGACAAAGATCTGCATG 21327146 Score = 105 bits (116), Expect = 6e-18 Identities = 167/232 (72%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| ||||||| || || || ||||||||| ||||| ||||||| Sbjct 21302922 CCACCACGGAGACGCAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCT 21302981 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC-GGG 41754 |||||||| | || || |||||||| || ||||| || || ||||| || || | ||| Sbjct 21302982 AGGGTGCGACCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCTGGAGGG 21303041 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGA---CTC 41811 | | || |||||||| ||| || |||| || | | || || | ||| ||| Sbjct 21303042 ATCCCT-TCCTTGTCTTGGATCTTG-GCTTTCAC-ATTAT-CAATGGTGTCCGAGCTCTC 21303097 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||||||| || || || ||||| |||| ||||| ||||| || |||||| Sbjct 21303098 CACCTCCAGTGTGATGGTCTTACCAGTCAAGGTCTTGACGAAGATTTGCATG 21303149 Score = 104 bits (114), Expect = 2e-17 Identities = 143/196 (73%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 ||||||||| || || ||||| | | ||| | |||| ||||||||||| |||||||| Sbjct 21328094 CTCCTTCTGGATATTGTAGTCAGCCAAGGTTCTGCCGTCCTCGAGCTGCTTTCCGGCGAA 21328153 Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGA 41790 || || | ||| || |||| ||||| || |||||||||| || | || |||| |||| Sbjct 21328154 GATAAGCCTCTGCTGATCCGGGGGAATGCCCTCCTTGTCC-TGGATCTTGGCTTTAACGT 21328212 Query 41791 CGAC-ACAGTGTC---GCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCT 41846 | | | ||||| ||| |||||||| | || || || || || || || |||| Sbjct 21328213 TGTCGATGGTGTCTGAGCT---TTCCACCTCAAGGGTGATTGTCTTTCCGGTGAGAGTCT 21328269 Query 41847 TTACGAAAATCTGCAT 41862 | ||||| |||||||| Sbjct 21328270 TAACGAATATCTGCAT 21328285 Score = 100 bits (110), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| ||||||| || || || |||||| || || || ||||| | Sbjct 21303149 GCCTCCACGCAGACGCAACACCAAGTGAAGTGTAGACTCCTTTTGGATATTGTAGTCAGC 21303208 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||| || | |||| ||||||||||| ||||| || |||| | ||| ||||| | || Sbjct 21303209 GAGAGTCCTGCCGTCCTCGAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCTGGAGG 21303268 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | | |||||||| | || | || |||| || | | |||||| ||||| Sbjct 21303269 GATACCCTCCTTGT-CTTGGATCTTAGCTTTGACATTATCAATGGTGTCGGAGCTCTCCA 21303327 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||| || || || || || |||| ||||| |||||||||||||| Sbjct 21303328 CCTCCAAAGTAATGGTCTTGCCGGTCAATGTCTTAACGAAAATCTGCAT 21303376 Score = 98.7 bits (108), Expect = 9e-16 Identities = 152/213 (71%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 || ||||||| || |||||| || ||||| ||||| | ||| || | |||| || Sbjct 21303396 ACGAGATGCAAAGTTGACTCCTTTTGGATGTTGTAGTCAGCGAGAGTCCTGCCGTCTTCA 21303455 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||||||||| ||||| |||| | ||| ||||||| || | | |||||||||| || Sbjct 21303456 AGCTGCTTGCCTGCGAAGATCAACCTCTGCTGGTCCGGTGGGATCCCCTCCTTGTCC-TG 21303514 Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTCCACCTCCACCGTTATCGT 41829 | || |||| |||| | | | ||||| ||| |||||||| | || ||||| Sbjct 21303515 GATCTTAGCTTTAACGTTGTCGATGGTGTCTGAGCT---TTCCACCTCGAGGGTGATCGT 21303571 Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || || || ||||| ||||| || ||||| Sbjct 21303572 CTTTCCGGTGAGAGTCTTAACGAAGATTTGCAT 21303604 >seq6 Length=53636577 Score = 127 bits (140), Expect = 2e-24 Identities = 165/223 (74%), Gaps = 4/223 (2%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 || || | ||||| || ||||| ||||||||| ||||| ||||| | ||| || | | Sbjct 30640166 AGGCGGAGCACCAAGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTCCTC 30640107 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCC-GCGGGAACGCTCTC 41763 |||| ||||||||||| |||||||| ||||| ||||| |||||| | |||| | || || Sbjct 30640106 CCGTCTTCGAGCTGCTTCCCGGCGAAGATCAGACGCTGCTGGTCCGGTGGGATCCCT-TC 30640048 Query 41764 CTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCG 41822 ||||||| ||| | || || | || | | | |||||| || || ||||| | | Sbjct 30640047 CTTGTCC-TGAATCTTGGCCTTGACATTGTCGATCGTGTCGGATGATTCGACCTCTAGGG 30639989 Query 41823 TTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 ||||||| || ||||| || || || || || |||||||| || Sbjct 30639988 TTATCGTCTTCCCCGTTAGGGTTTTCACAAAGATCTGCATTTT 30639946 >seq7 Length=27187321 Score = 120 bits (132), Expect = 3e-22 Identities = 168/232 (72%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||| ||||||||||| ||| ||||||||||| || || | Sbjct 639660 CCACCACGGAGACGAAGCACAAGATGCAGCGTAGACTCTTTCTGAATGTTGTAATCCGCA 639719 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || |||| || |||||||| |||||||| || || | |||||||| | || Sbjct 639720 AGAGTACGTCCGTCTTCTAGCTGCTTCCCGGCGAAGATAAGTCTTTGTTGGTCTGGTGGG 639779 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTC 41811 | | ||| |||||| ||| | ||||| | ||| | | ||||| ||| ||| Sbjct 639780 ATACCCTCTTTGTCC-TGAATCTTTGCCTTGACGTTATCGATCGTGTCAGAGCT---CTC 639835 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||||||| || || ||||| || || || ||||| || |||||||||||| Sbjct 639836 CACCTCCAAAGTGATGGTTTTGCCAGTGAGGGTCTTCACAAAAATCTGCATG 639887 Score = 102 bits (112), Expect = 8e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | |||| || || || ||| ||||||||||| ||||| | Sbjct 456940 GCCACCACGAAGACGGAGGACCAAGTGAAGGGTCGACTCTTTCTGAATGTTGTAGTCAGC 456881 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 | ||||| | || || |||||||| || || || || || ||||| ||||||| || Sbjct 456880 CAAAGTGCGACCATCCTCTAGCTGCTTCCCAGCAAAGATGAGACGCTGCTGGTCCGGTGG 456821 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | || ||||||||| ||| |||| |||| ||| | | | ||||| | |||| Sbjct 456820 GATGCCTTCCTTGTCC-TGAATTTTGGCTTTGACGTTGTCGATAGTGTTGGAACTTTCCA 456762 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||| | || || || || || |||| || || ||||| ||||||||| Sbjct 456761 CCTCAAGAGTGATGGTCTTGCCGGTCAAGGTTTTGACGAAGATCTGCATG 456712 Score = 95.1 bits (104), Expect = 1e-14 Identities = 158/225 (70%), Gaps = 14/225 (6%) Strand=Plus/Plus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 || || | ||| ||||||||||| ||| ||||||||||| ||||| | || ||||| Sbjct 639897 AGTCGAAGCACAAGATGCAGCGTAGACTCTTTCTGAATGTTGTAGTCAGCTAGCGTGCGT 639956 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || || |||||||| ||||| || || || | ||| ||||||| || | | ||| Sbjct 639957 CCATCCTCCAGCTGCTTACCGGCAAAGATGAGCCTCTGCTGGTCCGGTGGGATACCCTCT 640016 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGACA-CA---GTGTC---GCTCGACTCCACCTC 41817 || ||| ||| || ||| |||| | || ||||| ||| ||| ||||| Sbjct 640017 TTATCCTGGATCTTAGCCTT----GACGTTATCAATGGTGTCTGAGCT---CTCAACCTC 640069 Query 41818 CACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || || |||||||| || || ||||| || || || ||||| Sbjct 640070 CAAAGTAATGGTTTTACCGGTGAGGGTCTTGACAAAGATTTGCAT 640114 Score = 82.4 bits (90), Expect = 7e-11 Identities = 161/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| || || || |||||| || || || ||||| | Sbjct 639432 CCACCACGAAGACGAAGAACCAAGTGAAGAGTCGACTCCTTTTGGATATTGTAGTCAGCA 639491 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC-GGG 41754 || ||||| | || || |||||||| |||||||| || || | ||| || || | ||| Sbjct 639492 AGCGTGCGACCATCCTCAAGCTGCTTACCGGCGAAGATGAGTCTCTGCTGATCTGGTGGG 639551 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGA---CTC 41811 | | || ||||||||| ||| | || || | || | | | ||| || || ||| Sbjct 639552 ATCCCT-TCCTTGTCC-TGAATCTTAGCCTTGAC-ATTATCGATTGTGTCT-GAGCTCTC 639607 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||||| || || ||||| || || || ||||| || ||||||||||| Sbjct 639608 AACCTCCAAAGTGATGGTTTTGCCGGTGAGGGTCTTAACAAAAATCTGCAT 639658 >seq3 Length=29132933 Score = 120 bits (132), Expect = 3e-22 Identities = 169/232 (73%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || |||||||| || || || || ||||| ||||||||| ||||| ||||||| Sbjct 16258854 CCTCCACGTAGACGCAAGACAAGGTGAAGCGTAGACTCCTTCTGGATGTTGTAGTCGGCC 16258913 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCC-GCGGG 41754 | ||| || | || ||||||||||| |||||||| || || ||||| || ||| | ||| Sbjct 16258914 AAGGTTCGACCATCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGAGGG 16258973 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | | || ||||||||| || | || |||| ||| | | | |||||| |||| Sbjct 16258974 ATCCCT-TCCTTGTCC-TGGATCTTGGCTTTCACGTTGTCGATGGTGTCGGAGCTTTCCA 16259031 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 |||| | || || || || ||||| || || || ||||| |||||||| || Sbjct 16259032 CCTCGAGGGTGATTGTCTTTCCCGTGAGAGTTTTCACGAAGATCTGCATCTT 16259083 Score = 109 bits (120), Expect = 5e-19 Identities = 165/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| || || || ||||||||| ||||| ||||| | Sbjct 2316313 CCACCACGGAGACGGAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCTGCT 2316372 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | |||||| | || ||||||||||| || ||||| || || ||||| || |||| || Sbjct 2316373 AAGGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCCGGAGGG 2316432 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTC 41811 | || ||||||||| ||| | || || | ||| | | | ||||| ||| ||| Sbjct 2316433 ATGCCTTCCTTGTCC-TGAATCTTGGCCTTCACGTTGTCAATGGTGTCAGAGCT---CTC 2316488 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||| | || || || ||||| |||| ||||| || ||||||||||| Sbjct 2316489 CACCTCAAGTGTGATGGTCTTACCGGTCAAGGTCTTCACAAAAATCTGCAT 2316539 Score = 109 bits (120), Expect = 5e-19 Identities = 165/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| || || || ||||||||| ||||| ||||| | Sbjct 2323887 CCACCACGGAGACGGAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCTGCT 2323946 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | |||||| | || ||||||||||| || ||||| || || ||||| || |||| || Sbjct 2323947 AAGGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCCGGAGGG 2324006 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTC 41811 | || ||||||||| ||| | || || | ||| | | | ||||| ||| ||| Sbjct 2324007 ATGCCTTCCTTGTCC-TGAATCTTGGCCTTCACGTTGTCAATGGTGTCAGAGCT---CTC 2324062 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||| | || || || ||||| |||| ||||| || ||||||||||| Sbjct 2324063 CACCTCAAGTGTGATGGTCTTACCGGTCAAGGTCTTCACAAAAATCTGCAT 2324113 Score = 105 bits (116), Expect = 6e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 || ||||||| || ||||||||||||||| ||||| | || || | | || ||| Sbjct 2324363 ACGAGATGCAAAGTTGACTCCTTCTGAATGTTGTAGTCAGCAAGAGTCCTTCCATCCTCG 2324422 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 |||||||||||||| || |||| | ||| ||||||| || | | |||||| ||| || Sbjct 2324423 AGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGGATACCCTCCTTATCC-TG 2324481 Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832 | || || | |||| | | | ||||||| ||||||||||| || || || || Sbjct 2324482 GATCTTAGCCTTAACGTTGTCAATAGTGTCGGAGCTCTCCACCTCCAAAGTGATAGTCTT 2324541 Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || |||| ||||| || || |||||||| Sbjct 2324542 TCCGGTCAATGTCTTGACAAAGATCTGCAT 2324571 Score = 105 bits (116), Expect = 6e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 || ||||| ||||| ||||||||| ||||| ||||||| | || | |||| ||| Sbjct 9516874 ACGAGATGAAGCGTAGACTCCTTCTGGATGTTGTAGTCGGCCAATGTTCTGCCGTCTTCG 9516815 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||||||||||||||| || || | ||| || |||| || | | ||||||||| || Sbjct 9516814 AGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGATCCGGAGGGATACCTTCCTTGTCC-TG 9516756 Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832 | || |||| ||| | | | |||||| |||||||| | || || || || Sbjct 9516755 GATCTTGGCTTTGACGTTGTCGATGGTGTCGGAGCTTTCCACCTCGAGGGTGATGGTCTT 9516696 Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| || ||||| ||||| |||||||| Sbjct 9516695 TCCCGTGAGAGTCTTAACGAAGATCTGCAT 9516666 Score = 102 bits (112), Expect = 8e-17 Identities = 164/232 (71%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| ||||||| || || || ||| ||||| ||||| ||||||| Sbjct 9517348 CCACCACGAAGACGCAACACCAAGTGAAGGGTCGACTCTTTCTGGATGTTGTAGTCGGCT 9517289 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | ||| || | || ||||||||||| || ||||| || || || || ||||||| ||| Sbjct 9517288 AAGGTACGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCCGGAGGA 9517229 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTC 41811 | || ||||| ||| || | || || | || | | | ||||| ||| ||| Sbjct 9517228 ATGCCTTCCTTATCC-TGGATCTTGGCCTTGACATTGTCAATGGTGTCAGAGCT---CTC 9517173 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||||||| || || || || || || || ||||| || || ||||||||| Sbjct 9517172 CACCTCCAGTGTGATGGTCTTGCCGGTAAGTGTCTTCACAAAGATCTGCATG 9517121 Score = 100 bits (110), Expect = 3e-16 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || | || ||||| || || || ||||||||| ||||| ||||| | Sbjct 2324115 CCACCACGAAGCCTTAGCACCAAGTGAAGTGTTGACTCCTTCTGGATGTTGTAGTCAGCC 2324174 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | |||||| | || || |||||||| || ||||| || || ||||| ||||||| || Sbjct 2324175 AAGGTGCGACCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 2324234 Query 41756 ACGCTCTCCTTGTCCATGAT-TTTTTGCTTCAACGACGACAC-AGTGTCGCTCGACTCCA 41813 | || ||||||||| ||| | ||| | || ||||||| ||||| Sbjct 2324235 ATGCCTTCCTTGTCCTGGATCTNNNNNNNNNNACGTTGTCAATAGTGTCGGAGCTCTCCA 2324294 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||| || || || || || |||| ||||| || ||||||||||| Sbjct 2324295 CCTCCAAAGTGATAGTCTTTCCGGTCAAAGTCTTGACAAAAATCTGCAT 2324343 Score = 100 bits (110), Expect = 3e-16 Identities = 163/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| || || || ||||||||| ||||| || || | Sbjct 16258398 CCACCACGAAGACGGAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCAGCC 16258457 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | |||||| | || ||||||||||| || ||||| || || ||||| ||||||| || Sbjct 16258458 AAGGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 16258517 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTC 41811 | || ||||||||| || | || |||| || | | | ||| || ||| ||| Sbjct 16258518 ATGCCTTCCTTGTCC-TGGATCTTGGCTTTGACATTGTCAATAGTATCCGAGCT---CTC 16258573 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||||| || || || || || |||| ||||| || || |||||||| Sbjct 16258574 CACCTCCAAAGTAATAGTCTTTCCAGTCAAAGTCTTGACAAAGATCTGCAT 16258624 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 || |||||||| || |||||||||||| |||||||| | || || | | | || || Sbjct 16258644 ACGAGATGCAGAGTCGACTCCTTCTGAATATTATAGTCAGCAAGAGTCCTCCCATCCTCA 16258703 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 |||||||| ||||| || ||||| | ||| ||||||| || | | |||||| | | || Sbjct 16258704 AGCTGCTTCCCGGCAAAGATCAGCCTCTGCTGGTCCGGTGGGATCCCCTCCTTAT-CTTG 16258762 Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832 | || || | ||| | | |||||| ||||||||||| || || || || Sbjct 16258763 TATCTTAGCCTTGACGTTATCGATGGTGTCGGAGCTCTCCACCTCCAAAGTGATAGTCTT 16258822 Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || || ||||| ||||| |||||||| Sbjct 16258823 TCCGGTAAGAGTCTTGACGAAGATCTGCAT 16258852 Score = 86.0 bits (94), Expect = 6e-12 Identities = 163/237 (69%), Gaps = 11/237 (5%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG-- 41693 || || || || | || ||||| || || || ||||||||| ||||| ||||| | Sbjct 2316541 CCACCACGAAGCCTTAGCACCAAGTGAAGTGTTGACTCCTTCTGGATGTTGTAGTCAGCC 2316600 Query 41694 -----AG--AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGG 41746 || || || | | || ||||||||||||||||| || |||| | ||| ||| Sbjct 2316601 AAGTCAGCAAGAGTCCTTCCATCCTCGAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGG 2316660 Query 41747 TCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCT 41805 |||| || | | |||||| ||| || | || || | |||| | | | ||||||| Sbjct 2316661 TCCGGTGGGATACCCTCCTTATCC-TGGATCTTAGCCTTAACGTTGTCAATAGTGTCGGA 2316719 Query 41806 CGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||||||||| || || || || || |||| ||||| || || |||||||| Sbjct 2316720 GCTCTCCACCTCCAAAGTGATAGTCTTTCCGGTCAATGTCTTGACAAAGATCTGCAT 2316776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462242305531200