Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhazya_20stricta_20[genbank_20GCA_5F001752375.1_202016-10-04] 979 sequences; 274,354,041 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq940 129 6e-25 >seq940 Length=8971605 Score = 129 bits (142), Expect = 6e-25 Identities = 288/430 (67%), Gaps = 3/430 (1%) Strand=Plus/Minus Query 16964 CATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAAC 17023 || ||||| || ||||| | ||||| |||| ||| | ||||| || || ||||| Sbjct 8502671 CACGCGAAGTCACAATGGAGACCCTCATCTCGCGAGATTAACTCGTTCGAGAAGGTCAAA 8502612 Query 17024 CCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAAT 17083 |||||||| || |||||||||||||||||||||||| || ||| || |||||| Sbjct 8502611 CCGGGCATTAGCCCGCGTTTCTTTAACCAAAATATCGCGCAAAAACTCCCCGAGAAGAAT 8502552 Query 17084 ATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGA 17143 || ||||||||| | ||||| |||| || || || || | | | | || || Sbjct 8502551 ATCCCCTCGACGCAAGCAAAGGCGACCAAACGCTCCGCAAATGATTCTCCGCCGT--CG- 8502495 Query 17144 ATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTA 17203 |||||| | |||||| ||| || | | | |||| || || || || || | | Sbjct 8502494 ATCCATCGGAGGGCCCACTTGGCCTTCTTTTCAACGCAAGGTATGGTCTCCATTGCGTGA 8502435 Query 17204 AATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATT 17263 || | | | || || | | |||| | || || | |||| | || || ||||| Sbjct 8502434 AAGAGCCTGTGCTTCTCGTCTGGGTCCTTAATYTAGGACTCGAGCAAGAGYCTATACATC 8502375 Query 17264 TCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATT 17323 ||||| || ||||| || ||||| || || || ||||| ||| || || || | | Sbjct 8502374 TCGGAATGAATGTTTTCGATGGCAATTTGGAAGCCGTAGAAGGCACGYGCCTCGGAGACC 8502315 Query 17324 TGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCG 17383 |||||||| ||||||| | || ||||| || |||||||| || | |||| Sbjct 8502314 TGAACTTCTTTCATGAATCGTCCGGCGAGATTCTCCAAAACGATGCCATCTGAGGKGGCG 8502255 Query 17384 AAAAACGCCA 17393 ||||| |||| Sbjct 8502254 AAAAATGCCA 8502245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517539266535720